HEADER OXIDOREDUCTASE (H2O2 ACCEPTOR) 26-JUL-82 3CAT OBSLTE 01-APR-85 3CAT 7CAT 8CAT TITLE STRUCTURE OF BEEF LIVER CATALASE COMPND MOL_ID: 1; COMPND 2 MOLECULE:; COMPND 3 CHAIN: NULL; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS OXIDOREDUCTASE (H2O2 ACCEPTOR) EXPDTA X-RAY DIFFRACTION AUTHOR M.R.N.MURTHY,T.J.REID /III,A.SICIGNANO,N.TANAKA,M.G.ROSSMAN REVDAT 5 01-APR-85 3CAT 3 OBSLTE REVDAT 4 30-SEP-83 3CAT 1 REVDAT REVDAT 3 07-MAR-83 3CAT 3 ATOM REVDAT 2 07-MAR-83 3CAT 1 REMARK REVDAT 1 21-OCT-82 3CAT 0 SPRSDE 21-OCT-82 3CAT 1CAT JRNL AUTH M.R.N.MURTHY,T.J.REID /III,A.SICIGNANO,N.TANAKA, JRNL AUTH 2 M.G.ROSSMANN JRNL TITL STRUCTURE OF BEEF LIVER CATALASE JRNL REF J.MOL.BIOL. V. 152 465 1981 JRNL REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.R.N.MURTHY,T.J.REID /III,A.SICIGNANO,N.TANAKA, REMARK 1 AUTH 2 M.G.ROSSMANN REMARK 1 TITL THE STRUCTURE OF BEEF LIVER CATALASE REMARK 1 REF KRISTALLOGRAFIYA V. 26 1017 1981 REMARK 1 REFN ASTM KRISAJ UR ISSN 0023-4761 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.R.N.MURTHY,T.J.REID /III,A.SICIGNANO,N.TANAKA, REMARK 1 AUTH 2 M.G.ROSSMANN REMARK 1 TITL THE STRUCTURE OF BEEF LIVER CATALASE REMARK 1 REF SOV.PHYS.CRYSTALLOGR.(ENGL. V. 26 577 1981 REMARK 1 REF 2 TRANSL.) REMARK 1 REFN ASTM SPHCA6 US ISSN 0038-5638 REMARK 1 REFERENCE 3 REMARK 1 AUTH T.J.REID /III,M.R.N.MURTHY,A.SICIGNANO,N.TANAKA, REMARK 1 AUTH 2 W.D.L.MUSICK,M.G.ROSSMANN REMARK 1 TITL STRUCTURE AND HEME ENVIRONMENT OF BEEF LIVER REMARK 1 TITL 2 CATALASE AT 2.5 ANGSTROMS RESOLUTION REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 78 4767 1981 REMARK 1 REFN ASTM PNASA6 US ISSN 0027-8424 REMARK 1 REFERENCE 4 REMARK 1 AUTH W.EVENTOFF,N.TANAKA,M.G.ROSSMANN REMARK 1 TITL CRYSTALLINE BOVINE LIVER CATALASE REMARK 1 REF J.MOL.BIOL. V. 103 799 1976 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 5 REMARK 1 AUTH W.EVENTOFF,G.V.GURSKAYA REMARK 1 TITL THE MOLECULAR SYMMETRY OF BOVINE LIVER CATALASE REMARK 1 REF J.MOL.BIOL. V. 93 55 1975 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. NULL ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : NULL REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3986 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3CAT COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 5 REMARK 5 3CAT COORDINATES FOR RESIDUES 1-4 AND 501-506 ARE NOT REMARK 5 INCLUDED. 3CAT REMARK 6 REMARK 6 3CAT THE NINE-STRANDED SHEET S1 DESCRIBED BELOW IS ACTUALLY REMARK 6 AN 3CAT EIGHT-STRANDED BETA BARREL. THIS IS DENOTED BY THE REMARK 6 FIRST 3CAT STRAND RECURRING AS THE LAST STRAND. 3CAT REMARK 7 REMARK 7 3CAT CORRECTION. CORRECT FORMAT OF REFERENCE 3. 07-MAR-83. REMARK 7 3CAT REMARK 8 REMARK 8 3CAT CORRECTION. FIX ATOM NUMBERING FOR RESIDUE 5. 07-MAR- REMARK 8 83. 3CAT REMARK 9 REMARK 9 3CAT CORRECTION. INSERT REVDAT RECORDS. 30-SEP-83. 3CAT REMARK 10 REMARK 10 3CAT CORRECTION. THIS ENTRY IS OBSOLETE. 01-APR-85. 3CAT REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,2/3+Z REMARK 290 3555 -X+Y,-X,1/3+Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,1/3-Z REMARK 290 6555 -X,-X+Y,2/3-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.418335 -0.842080 0.340443 16.13609 REMARK 290 SMTRY2 2 0.842120 -0.499940 -0.202168 -0.00115 REMARK 290 SMTRY3 2 0.340479 0.202146 0.918275 67.22239 REMARK 290 SMTRY1 3 -0.418215 0.842080 0.340443 8.06805 REMARK 290 SMTRY2 3 -0.842132 -0.500060 0.202120 -0.00057 REMARK 290 SMTRY3 3 0.340450 -0.202146 0.918275 33.61119 REMARK 290 SMTRY1 4 0.418335 0.842080 -0.340443 0.00000 REMARK 290 SMTRY2 4 0.842061 -0.500060 -0.202120 0.00000 REMARK 290 SMTRY3 4 -0.340479 -0.202146 -0.918275 0.00000 REMARK 290 SMTRY1 5 0.418215 -0.842080 -0.340443 8.06805 REMARK 290 SMTRY2 5 -0.842191 -0.499940 0.202168 -0.00057 REMARK 290 SMTRY3 5 -0.340450 0.202146 -0.918275 33.61119 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 16.13609 REMARK 290 SMTRY2 6 0.000142 1.000000 0.000000 -0.00115 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 67.22239 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA 1 REMARK 465 ASP 2 REMARK 465 ASN 3 REMARK 465 ARG 4 REMARK 465 GLU 501 REMARK 465 GLU 502 REMARK 465 LYS 503 REMARK 465 PRO 504 REMARK 465 LYS 505 REMARK 465 ASN 506 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP 5 N OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 OH TYR 357 FE HEM 1 1.59 REMARK 500 O ALA 250 N ALA 253 1.85 REMARK 500 NH1 ARG 364 O1A HEM 1 1.85 REMARK 500 CG2 THR 277 NZ LYS 314 1.87 REMARK 500 OE1 GLU 70 OG SER 119 1.90 REMARK 500 CE LYS 37 OE1 GLU 59 1.91 REMARK 500 O THR 114 N ALA 116 1.91 REMARK 500 NH1 ARG 209 OD1 ASP 263 1.92 REMARK 500 CG2 THR 124 O ALA 249 1.94 REMARK 500 O TYR 357 ND1 HIS 361 1.95 REMARK 500 CE1 TYR 446 O GLU 487 1.96 REMARK 500 NH2 ARG 353 C3C HEM 1 1.97 REMARK 500 OH TYR 83 NH2 ARG 105 1.98 REMARK 500 O ASP 256 OD2 ASP 258 1.98 REMARK 500 NH2 ARG 126 ND2 ASN 461 1.99 REMARK 500 OD2 ASP 334 OH TYR 369 1.99 REMARK 500 OH TYR 357 N C HEM 1 2.01 REMARK 500 NH1 ARG 364 O2A HEM 1 2.01 REMARK 500 O LYS 479 N ASP 483 2.01 REMARK 500 NZ LYS 236 CD1 LEU 309 2.03 REMARK 500 OD2 ASP 334 CE1 TYR 369 2.04 REMARK 500 O ALA 157 N LEU 159 2.07 REMARK 500 OH TYR 446 OE1 GLU 487 2.07 REMARK 500 N LEU 41 OD1 ASP 53 2.09 REMARK 500 CB PHE 481 O TYR 488 2.09 REMARK 500 NH2 ARG 71 NE ARG 111 2.10 REMARK 500 CG2 ILE 268 O ASN 318 2.10 REMARK 500 O LYS 467 N ALA 469 2.10 REMARK 500 O GLU 118 OG SER 121 2.11 REMARK 500 NZ LYS 300 O ASP 437 2.11 REMARK 500 O VAL 442 N PHE 445 2.11 REMARK 500 NH1 ARG 155 ND2 ASN 438 2.12 REMARK 500 O ARG 443 N PHE 445 2.12 REMARK 500 OH TYR 446 CD GLU 487 2.14 REMARK 500 O LYS 498 N ASN 500 2.15 REMARK 500 O LEU 298 N LYS 300 2.16 REMARK 500 O ASP 179 CB ASP 183 2.18 REMARK 500 O VAL 328 CB LEU 331 2.18 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CG PHE 325 OD1 ASP 388 6556 1.93 REMARK 500 OE1 GLN 330 N CYS 392 6556 2.09 REMARK 500 CE1 HIS 62 O ARG 387 6556 2.10 REMARK 500 CB LEU 365 CE MET 391 6556 2.13 REMARK 500 O LEU 365 CG MET 391 6556 2.17 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE 197 CB PHE 197 CG 0.215 REMARK 500 PRO 257 CA PRO 257 C -0.181 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN 10 CB - CA - C ANGL. DEV. =-31.2 DEGREES REMARK 500 GLN 10 N - CA - CB ANGL. DEV. = 48.6 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA 20 142.98 124.37 REMARK 500 ASP 24 130.59 110.91 REMARK 500 ASP 89 107.40 128.15 REMARK 500 LYS 97 -38.52 135.55 REMARK 500 ALA 116 145.18 69.20 REMARK 500 ASP 123 -51.63 129.21 REMARK 500 ALA 157 -65.25 114.33 REMARK 500 ASN 170 120.74 110.21 REMARK 500 TYR 214 135.79 117.68 REMARK 500 SER 216 -46.97 23.63 REMARK 500 PHE 219 171.82 98.46 REMARK 500 ASP 225 -78.22 92.86 REMARK 500 ASP 256 9.21 138.00 REMARK 500 ASN 272 -150.26 4.54 REMARK 500 TYR 273 101.86 146.17 REMARK 500 PHE 285 -51.36 100.92 REMARK 500 PHE 291 158.93 53.09 REMARK 500 HIS 304 -49.52 81.68 REMARK 500 ASP 388 117.73 14.91 REMARK 500 MET 394 -104.59 47.32 REMARK 500 GLU 419 134.44 77.26 REMARK 500 GLU 452 -40.12 87.92 REMARK 500 HIS 485 112.29 119.11 REMARK 500 TYR 488 27.58 128.37 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR 404 PRO 405 -127.06 SEQRES 1 506 ALA ASP ASN ARG ASP PRO ALA SER ASP GLN MET LYS HIS SEQRES 2 506 TRP LYS GLU GLN ARG ALA ALA GLN LYS PRO ASP VAL LEU SEQRES 3 506 THR THR GLY GLY GLY ASN PRO VAL GLY ASP LYS LEU ASN SEQRES 4 506 SER LEU THR VAL GLY PRO ARG GLY PRO LEU LEU VAL GLN SEQRES 5 506 ASP VAL VAL PHE THR ASP GLU MET ALA HIS PHE ASP ARG SEQRES 6 506 GLU ARG ILE PRO GLU ARG VAL VAL HIS ALA LYS GLY ALA SEQRES 7 506 GLY ALA PHE GLY TYR PHE GLU VAL THR HIS ASP ILE THR SEQRES 8 506 ARG TYR SER LYS ALA LYS VAL PHE GLU HIS ILE GLY LYS SEQRES 9 506 ARG THR PRO ILE ALA VAL ARG PHE SER THR VAL ALA GLY SEQRES 10 506 GLU SER GLY SER ALA ASP THR VAL ARG ASP PRO ARG GLY SEQRES 11 506 PHE ALA VAL LYS PHE TYR THR GLU ASP GLY ASN TRP ASP SEQRES 12 506 LEU VAL GLY ASN ASN THR PRO ILE PHE PHE ILE ARG ASP SEQRES 13 506 ALA LEU LEU PHE PRO SER PHE ILE HIS SER GLN LYS ARG SEQRES 14 506 ASN PRO GLN THR HIS LEU LYS ASP PRO ASP MET VAL TRP SEQRES 15 506 ASP PHE TRP SER LEU ARG PRO GLU SER LEU HIS GLN VAL SEQRES 16 506 SER PHE LEU PHE SER ASP ARG GLY ILE PRO ASP GLY HIS SEQRES 17 506 ARG HIS MET ASP GLY TYR GLY SER HIS THR PHE LYS LEU SEQRES 18 506 VAL ASN ALA ASP GLY GLU ALA VAL TYR CYS LYS PHE HIS SEQRES 19 506 TYR LYS THR ASP GLN GLY ILE LYS ASN LEU SER VAL GLU SEQRES 20 506 ASP ALA ALA ARG LEU ALA HIS GLU ASP PRO ASP TYR GLY SEQRES 21 506 LEU ARG ASP LEU PHE ASN ALA ILE ALA THR GLY ASN TYR SEQRES 22 506 PRO SER TRP THR LEU TYR ILE GLN VAL MET THR PHE SER SEQRES 23 506 GLU ALA GLU ILE PHE PRO PHE ASN PRO PHE ASP LEU THR SEQRES 24 506 LYS VAL TRP PRO HIS GLY ASP TYR PRO LEU ILE PRO VAL SEQRES 25 506 GLY LYS LEU VAL LEU ASN ARG ASN PRO VAL ASN TYR PHE SEQRES 26 506 ALA GLU VAL GLU GLN LEU ALA PHE ASP PRO SER ASN MET SEQRES 27 506 PRO PRO GLY ILE GLU PRO SER PRO ASP LYS MET LEU GLN SEQRES 28 506 GLY ARG LEU PHE ALA TYR PRO ASP THR HIS ARG HIS ARG SEQRES 29 506 LEU GLY PRO ASN TYR LEU GLN ILE PRO VAL ASN CYS PRO SEQRES 30 506 TYR ARG ALA ARG VAL ALA ASN TYR GLN ARG ASP GLY PRO SEQRES 31 506 MET CYS MET MET ASP ASN GLN GLY GLY ALA PRO ASN TYR SEQRES 32 506 TYR PRO ASN SER PHE SER ALA PRO GLU HIS GLN PRO SER SEQRES 33 506 ALA LEU GLU HIS ARG THR HIS PHE SER GLY ASP VAL GLN SEQRES 34 506 ARG PHE ASN SER ALA ASN ASP ASP ASN VAL THR GLN VAL SEQRES 35 506 ARG THR PHE TYR LEU LYS VAL LEU ASN GLU GLU GLN ARG SEQRES 36 506 LYS ARG LEU CYS GLU ASN ILE ALA GLY HIS LEU LYS ASP SEQRES 37 506 ALA GLN LEU PHE ILE GLN LYS LYS ALA VAL LYS ASN PHE SEQRES 38 506 SER ASP VAL HIS PRO GLU TYR GLY SER ARG ILE GLN ALA SEQRES 39 506 LEU LEU ASP LYS TYR ASN GLU GLU LYS PRO LYS ASN HET HEM 1 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 HELIX 1 H1 ASP 9 ALA 19 1 11 HELIX 2 H2 ASP 53 ARG 67 1 15 HELIX 3 H3 ASP 156 LYS 168 1 13 HELIX 4 H4 ASP 177 ARG 188 1 12 HELIX 5 H5 PRO 189 SER 200 1 12 HELIX 6 H6 SER 245 ASP 256 1 12 HELIX 7 H7 ASP 258 ASN 272 1 15 HELIX 8 H8 ASN 323 GLU 329 1 7 HELIX 9 H9 ASP 347 GLY 366 1 20 HELIX 10 H10 ASP 437 LEU 447 1 11 HELIX 11 H11 ASN 451 LYS 467 1 17 HELIX 12 H12 GLN 470 ASP 483 1 14 HELIX 13 H13 HIS 485 ASN 500 1 16 SHEET 1 S1 9 LYS 76 VAL 86 0 SHEET 2 S1 9 LYS 104 THR 114 -1 N ILE 108 O GLY 82 SHEET 3 S1 9 ARG 129 PHE 135 -1 N ALA 132 O ARG 111 SHEET 4 S1 9 TRP 142 ASN 148 -1 N LEU 144 O VAL 133 SHEET 5 S1 9 GLY 213 ASN 223 -1 N SER 216 O VAL 145 SHEET 6 S1 9 GLY 226 GLN 239 -1 N TYR 230 O PHE 219 SHEET 7 S1 9 PRO 274 MET 283 -1 N TYR 279 O TYR 235 SHEET 8 S1 9 GLY 313 LEU 317 -1 N LEU 315 O TRP 276 SHEET 9 S1 9 LYS 76 VAL 86 -1 N GLU 85 O LYS 314 CRYST1 142.000 142.000 103.700 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007907 0.000000 -0.001898 0.00000 SCALE2 0.003954 0.007042 -0.000949 0.65200 SCALE3 0.002251 0.000000 0.009377 0.83333 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 MTRIX2 1 0.000000 -1.000000 0.000000 0.00000 MTRIX3 1 0.000000 0.000000 -1.000000 0.00000