data_3CB8 # _entry.id 3CB8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CB8 pdb_00003cb8 10.2210/pdb3cb8/pdb RCSB RCSB046566 ? ? WWPDB D_1000046566 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_dist_value' 4 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 15 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 16 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3CB8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-02-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3C8F _pdbx_database_related.details ;4Fe-4S-Pyruvate formate-lyase Activating Enzyme with partially disordered AdoMet ; _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vey, J.L.' 1 'Drennan, C.L.' 2 # _citation.id primary _citation.title 'Structural basis for glycyl radical formation by pyruvate formate-lyase activating enzyme.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 105 _citation.page_first 16137 _citation.page_last 16141 _citation.year 2008 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18852451 _citation.pdbx_database_id_DOI 10.1073/pnas.0806640105 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vey, J.L.' 1 ? primary 'Yang, J.' 2 ? primary 'Li, M.' 3 ? primary 'Broderick, W.E.' 4 ? primary 'Broderick, J.B.' 5 ? primary 'Drennan, C.L.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Pyruvate formate-lyase 1-activating enzyme' 28115.164 1 1.97.1.4 ? ? ? 2 polymer syn 'peptide substrate VSGYAV' 594.658 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn S-ADENOSYLMETHIONINE 398.437 1 ? ? ? ? 5 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 6 non-polymer syn 'FORMIC ACID' 46.025 4 ? ? ? ? 7 water nat water 18.015 12 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PFL-activating enzyme, Formate-C-acetyltransferase-activating enzyme 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEA ILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKN VKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYG HKVMF ; ;SVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEA ILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKN VKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYG HKVMF ; A ? 2 'polypeptide(L)' no no VSGYAV VSGYAV B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 S-ADENOSYLMETHIONINE SAM 5 'IRON/SULFUR CLUSTER' SF4 6 'FORMIC ACID' FMT 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 VAL n 1 3 ILE n 1 4 GLY n 1 5 ARG n 1 6 ILE n 1 7 HIS n 1 8 SER n 1 9 PHE n 1 10 GLU n 1 11 SER n 1 12 CYS n 1 13 GLY n 1 14 THR n 1 15 VAL n 1 16 ASP n 1 17 GLY n 1 18 PRO n 1 19 GLY n 1 20 ILE n 1 21 ARG n 1 22 PHE n 1 23 ILE n 1 24 THR n 1 25 PHE n 1 26 PHE n 1 27 GLN n 1 28 GLY n 1 29 CYS n 1 30 LEU n 1 31 MET n 1 32 ARG n 1 33 CYS n 1 34 LEU n 1 35 TYR n 1 36 CYS n 1 37 HIS n 1 38 ASN n 1 39 ARG n 1 40 ASP n 1 41 THR n 1 42 TRP n 1 43 ASP n 1 44 THR n 1 45 HIS n 1 46 GLY n 1 47 GLY n 1 48 LYS n 1 49 GLU n 1 50 VAL n 1 51 THR n 1 52 VAL n 1 53 GLU n 1 54 ASP n 1 55 LEU n 1 56 MET n 1 57 LYS n 1 58 GLU n 1 59 VAL n 1 60 VAL n 1 61 THR n 1 62 TYR n 1 63 ARG n 1 64 HIS n 1 65 PHE n 1 66 MET n 1 67 ASN n 1 68 ALA n 1 69 SER n 1 70 GLY n 1 71 GLY n 1 72 GLY n 1 73 VAL n 1 74 THR n 1 75 ALA n 1 76 SER n 1 77 GLY n 1 78 GLY n 1 79 GLU n 1 80 ALA n 1 81 ILE n 1 82 LEU n 1 83 GLN n 1 84 ALA n 1 85 GLU n 1 86 PHE n 1 87 VAL n 1 88 ARG n 1 89 ASP n 1 90 TRP n 1 91 PHE n 1 92 ARG n 1 93 ALA n 1 94 CYS n 1 95 LYS n 1 96 LYS n 1 97 GLU n 1 98 GLY n 1 99 ILE n 1 100 HIS n 1 101 THR n 1 102 CYS n 1 103 LEU n 1 104 ASP n 1 105 THR n 1 106 ASN n 1 107 GLY n 1 108 PHE n 1 109 VAL n 1 110 ARG n 1 111 ARG n 1 112 TYR n 1 113 ASP n 1 114 PRO n 1 115 VAL n 1 116 ILE n 1 117 ASP n 1 118 GLU n 1 119 LEU n 1 120 LEU n 1 121 GLU n 1 122 VAL n 1 123 THR n 1 124 ASP n 1 125 LEU n 1 126 VAL n 1 127 MET n 1 128 LEU n 1 129 ASP n 1 130 LEU n 1 131 LYS n 1 132 GLN n 1 133 MET n 1 134 ASN n 1 135 ASP n 1 136 GLU n 1 137 ILE n 1 138 HIS n 1 139 GLN n 1 140 ASN n 1 141 LEU n 1 142 VAL n 1 143 GLY n 1 144 VAL n 1 145 SER n 1 146 ASN n 1 147 HIS n 1 148 ARG n 1 149 THR n 1 150 LEU n 1 151 GLU n 1 152 PHE n 1 153 ALA n 1 154 LYS n 1 155 TYR n 1 156 LEU n 1 157 ALA n 1 158 ASN n 1 159 LYS n 1 160 ASN n 1 161 VAL n 1 162 LYS n 1 163 VAL n 1 164 TRP n 1 165 ILE n 1 166 ARG n 1 167 TYR n 1 168 VAL n 1 169 VAL n 1 170 VAL n 1 171 PRO n 1 172 GLY n 1 173 TRP n 1 174 SER n 1 175 ASP n 1 176 ASP n 1 177 ASP n 1 178 ASP n 1 179 SER n 1 180 ALA n 1 181 HIS n 1 182 ARG n 1 183 LEU n 1 184 GLY n 1 185 GLU n 1 186 PHE n 1 187 THR n 1 188 ARG n 1 189 ASP n 1 190 MET n 1 191 GLY n 1 192 ASN n 1 193 VAL n 1 194 GLU n 1 195 LYS n 1 196 ILE n 1 197 GLU n 1 198 LEU n 1 199 LEU n 1 200 PRO n 1 201 TYR n 1 202 HIS n 1 203 GLU n 1 204 LEU n 1 205 GLY n 1 206 LYS n 1 207 HIS n 1 208 LYS n 1 209 TRP n 1 210 VAL n 1 211 ALA n 1 212 MET n 1 213 GLY n 1 214 GLU n 1 215 GLU n 1 216 TYR n 1 217 LYS n 1 218 LEU n 1 219 ASP n 1 220 GLY n 1 221 VAL n 1 222 LYS n 1 223 PRO n 1 224 PRO n 1 225 LYS n 1 226 LYS n 1 227 GLU n 1 228 THR n 1 229 MET n 1 230 GLU n 1 231 ARG n 1 232 VAL n 1 233 LYS n 1 234 GLY n 1 235 ILE n 1 236 LEU n 1 237 GLU n 1 238 GLN n 1 239 TYR n 1 240 GLY n 1 241 HIS n 1 242 LYS n 1 243 VAL n 1 244 MET n 1 245 PHE n 2 1 VAL n 2 2 SER n 2 3 GLY n 2 4 TYR n 2 5 ALA n 2 6 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pflA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pCAL-n-AE _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The peptide was synthesized by Celtek Peptides' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAM non-polymer . S-ADENOSYLMETHIONINE ? 'C15 H22 N6 O5 S' 398.437 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 CYS 12 12 12 CYS CYS A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 MET 31 31 31 MET MET A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 CYS 33 33 33 CYS CYS A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 TYR 35 35 35 TYR TYR A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LYS 48 48 48 LYS ALA A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 GLU 53 53 53 GLU ALA A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 LYS 57 57 57 LYS ALA A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 HIS 64 64 64 HIS ALA A . n A 1 65 PHE 65 65 65 PHE ALA A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 TRP 90 90 90 TRP TRP A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 CYS 102 102 102 CYS CYS A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 TYR 112 112 112 TYR TYR A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 GLU 121 121 121 GLU ALA A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 MET 127 127 127 MET MET A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 MET 133 133 133 MET MET A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 GLU 136 136 136 GLU ALA A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 HIS 138 138 138 HIS HIS A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 ASN 146 146 146 ASN ASN A . n A 1 147 HIS 147 147 147 HIS HIS A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 TYR 155 155 155 TYR TYR A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 ASN 160 160 160 ASN ALA A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 LYS 162 162 162 LYS ALA A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 TRP 164 164 164 TRP TRP A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 TRP 173 173 173 TRP TRP A . n A 1 174 SER 174 174 174 SER SER A . n A 1 175 ASP 175 175 175 ASP ASP A . n A 1 176 ASP 176 176 176 ASP ASP A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 HIS 181 181 181 HIS HIS A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 GLU 185 185 185 GLU ALA A . n A 1 186 PHE 186 186 186 PHE PHE A . n A 1 187 THR 187 187 187 THR THR A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 ASP 189 189 189 ASP ASP A . n A 1 190 MET 190 190 190 MET MET A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 ASN 192 192 192 ASN ASN A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 GLU 194 194 194 GLU GLU A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 LEU 198 198 198 LEU LEU A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 TYR 201 201 201 TYR TYR A . n A 1 202 HIS 202 202 202 HIS HIS A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 LYS 206 206 206 LYS ALA A . n A 1 207 HIS 207 207 207 HIS HIS A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 TRP 209 209 209 TRP TRP A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 ALA 211 211 211 ALA ALA A . n A 1 212 MET 212 212 212 MET MET A . n A 1 213 GLY 213 213 213 GLY GLY A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 GLU 215 215 215 GLU GLU A . n A 1 216 TYR 216 216 216 TYR TYR A . n A 1 217 LYS 217 217 217 LYS ALA A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 LYS 222 222 222 LYS ALA A . n A 1 223 PRO 223 223 223 PRO PRO A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 LYS 225 225 225 LYS ALA A . n A 1 226 LYS 226 226 226 LYS ALA A . n A 1 227 GLU 227 227 227 GLU ALA A . n A 1 228 THR 228 228 228 THR THR A . n A 1 229 MET 229 229 229 MET MET A . n A 1 230 GLU 230 230 230 GLU GLU A . n A 1 231 ARG 231 231 231 ARG ARG A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 GLY 234 234 234 GLY GLY A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 LEU 236 236 236 LEU LEU A . n A 1 237 GLU 237 237 237 GLU GLU A . n A 1 238 GLN 238 238 238 GLN GLN A . n A 1 239 TYR 239 239 239 TYR TYR A . n A 1 240 GLY 240 240 240 GLY GLY A . n A 1 241 HIS 241 241 241 HIS HIS A . n A 1 242 LYS 242 242 242 LYS ALA A . n A 1 243 VAL 243 243 243 VAL VAL A . n A 1 244 MET 244 244 244 MET ALA A . n A 1 245 PHE 245 245 245 PHE PHE A . n B 2 1 VAL 1 732 732 VAL VAL B . n B 2 2 SER 2 733 733 SER SER B . n B 2 3 GLY 3 734 734 GLY GLY B . n B 2 4 TYR 4 735 735 TYR TYR B . n B 2 5 ALA 5 736 736 ALA ALA B . n B 2 6 VAL 6 737 737 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA 1 820 820 NA NA A . D 4 SAM 1 501 501 SAM SAM A . E 5 SF4 1 500 500 SF4 FS4 A . F 6 FMT 1 502 502 FMT FMT A . G 6 FMT 1 503 503 FMT FMT A . H 6 FMT 1 504 504 FMT FMT A . I 6 FMT 1 505 505 FMT FMT A . J 7 HOH 1 802 802 HOH TIP A . J 7 HOH 2 803 803 HOH TIP A . J 7 HOH 3 804 804 HOH TIP A . J 7 HOH 4 805 805 HOH TIP A . J 7 HOH 5 806 806 HOH TIP A . J 7 HOH 6 807 807 HOH TIP A . J 7 HOH 7 811 811 HOH TIP A . J 7 HOH 8 812 812 HOH TIP A . J 7 HOH 9 814 814 HOH TIP A . J 7 HOH 10 817 817 HOH TIP A . K 7 HOH 1 816 816 HOH TIP B . K 7 HOH 2 818 818 HOH TIP B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 48 ? CG ? A LYS 48 CG 2 1 Y 1 A LYS 48 ? CD ? A LYS 48 CD 3 1 Y 1 A LYS 48 ? CE ? A LYS 48 CE 4 1 Y 1 A LYS 48 ? NZ ? A LYS 48 NZ 5 1 Y 1 A GLU 53 ? CG ? A GLU 53 CG 6 1 Y 1 A GLU 53 ? CD ? A GLU 53 CD 7 1 Y 1 A GLU 53 ? OE1 ? A GLU 53 OE1 8 1 Y 1 A GLU 53 ? OE2 ? A GLU 53 OE2 9 1 Y 1 A LYS 57 ? CG ? A LYS 57 CG 10 1 Y 1 A LYS 57 ? CD ? A LYS 57 CD 11 1 Y 1 A LYS 57 ? CE ? A LYS 57 CE 12 1 Y 1 A LYS 57 ? NZ ? A LYS 57 NZ 13 1 Y 1 A HIS 64 ? CG ? A HIS 64 CG 14 1 Y 1 A HIS 64 ? ND1 ? A HIS 64 ND1 15 1 Y 1 A HIS 64 ? CD2 ? A HIS 64 CD2 16 1 Y 1 A HIS 64 ? CE1 ? A HIS 64 CE1 17 1 Y 1 A HIS 64 ? NE2 ? A HIS 64 NE2 18 1 Y 1 A PHE 65 ? CG ? A PHE 65 CG 19 1 Y 1 A PHE 65 ? CD1 ? A PHE 65 CD1 20 1 Y 1 A PHE 65 ? CD2 ? A PHE 65 CD2 21 1 Y 1 A PHE 65 ? CE1 ? A PHE 65 CE1 22 1 Y 1 A PHE 65 ? CE2 ? A PHE 65 CE2 23 1 Y 1 A PHE 65 ? CZ ? A PHE 65 CZ 24 1 Y 1 A GLU 121 ? CG ? A GLU 121 CG 25 1 Y 1 A GLU 121 ? CD ? A GLU 121 CD 26 1 Y 1 A GLU 121 ? OE1 ? A GLU 121 OE1 27 1 Y 1 A GLU 121 ? OE2 ? A GLU 121 OE2 28 1 Y 1 A GLU 136 ? CG ? A GLU 136 CG 29 1 Y 1 A GLU 136 ? CD ? A GLU 136 CD 30 1 Y 1 A GLU 136 ? OE1 ? A GLU 136 OE1 31 1 Y 1 A GLU 136 ? OE2 ? A GLU 136 OE2 32 1 Y 1 A ASN 160 ? CG ? A ASN 160 CG 33 1 Y 1 A ASN 160 ? OD1 ? A ASN 160 OD1 34 1 Y 1 A ASN 160 ? ND2 ? A ASN 160 ND2 35 1 Y 1 A LYS 162 ? CG ? A LYS 162 CG 36 1 Y 1 A LYS 162 ? CD ? A LYS 162 CD 37 1 Y 1 A LYS 162 ? CE ? A LYS 162 CE 38 1 Y 1 A LYS 162 ? NZ ? A LYS 162 NZ 39 1 Y 1 A GLU 185 ? CG ? A GLU 185 CG 40 1 Y 1 A GLU 185 ? CD ? A GLU 185 CD 41 1 Y 1 A GLU 185 ? OE1 ? A GLU 185 OE1 42 1 Y 1 A GLU 185 ? OE2 ? A GLU 185 OE2 43 1 Y 1 A LYS 206 ? CG ? A LYS 206 CG 44 1 Y 1 A LYS 206 ? CD ? A LYS 206 CD 45 1 Y 1 A LYS 206 ? CE ? A LYS 206 CE 46 1 Y 1 A LYS 206 ? NZ ? A LYS 206 NZ 47 1 Y 1 A LYS 217 ? CG ? A LYS 217 CG 48 1 Y 1 A LYS 217 ? CD ? A LYS 217 CD 49 1 Y 1 A LYS 217 ? CE ? A LYS 217 CE 50 1 Y 1 A LYS 217 ? NZ ? A LYS 217 NZ 51 1 Y 1 A LYS 222 ? CG ? A LYS 222 CG 52 1 Y 1 A LYS 222 ? CD ? A LYS 222 CD 53 1 Y 1 A LYS 222 ? CE ? A LYS 222 CE 54 1 Y 1 A LYS 222 ? NZ ? A LYS 222 NZ 55 1 Y 1 A LYS 225 ? CG ? A LYS 225 CG 56 1 Y 1 A LYS 225 ? CD ? A LYS 225 CD 57 1 Y 1 A LYS 225 ? CE ? A LYS 225 CE 58 1 Y 1 A LYS 225 ? NZ ? A LYS 225 NZ 59 1 Y 1 A LYS 226 ? CG ? A LYS 226 CG 60 1 Y 1 A LYS 226 ? CD ? A LYS 226 CD 61 1 Y 1 A LYS 226 ? CE ? A LYS 226 CE 62 1 Y 1 A LYS 226 ? NZ ? A LYS 226 NZ 63 1 Y 1 A GLU 227 ? CG ? A GLU 227 CG 64 1 Y 1 A GLU 227 ? CD ? A GLU 227 CD 65 1 Y 1 A GLU 227 ? OE1 ? A GLU 227 OE1 66 1 Y 1 A GLU 227 ? OE2 ? A GLU 227 OE2 67 1 Y 1 A LYS 242 ? CG ? A LYS 242 CG 68 1 Y 1 A LYS 242 ? CD ? A LYS 242 CD 69 1 Y 1 A LYS 242 ? CE ? A LYS 242 CE 70 1 Y 1 A LYS 242 ? NZ ? A LYS 242 NZ 71 1 Y 1 A MET 244 ? CG ? A MET 244 CG 72 1 Y 1 A MET 244 ? SD ? A MET 244 SD 73 1 Y 1 A MET 244 ? CE ? A MET 244 CE # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SOLVE 2.10 8-Jun-2005 package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 1 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 2 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 Blu-Ice . ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 SCALEIT . ? ? ? ? 'data scaling' ? ? ? 6 # _cell.length_a 74.494 _cell.length_b 74.494 _cell.length_c 187.737 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3CB8 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.entry_id 3CB8 _symmetry.Int_Tables_number 178 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 3CB8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.62 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 53.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details ;100 mM HEPES, 3.5 M sodium formate, 0.2 mM 2,6-dimethyl-4-heptyl-beta-D-maltopyranoside, pH 6.8, vapor diffusion, hanging drop, temperature 298K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2006-07-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'Side-scattering cuberoot I-beam bent single crystal; asymetric cut 12.2 degs' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.73955 1.0 2 1.74158 1.0 3 1.36241 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 1.73955,1.74158,1.36241 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 # _reflns.entry_id 3CB8 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.77 _reflns.d_resolution_low 37.95 _reflns.number_all ? _reflns.number_obs 8376 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.073 _reflns.pdbx_netI_over_sigmaI 19.9 _reflns.B_iso_Wilson_estimate 11.41 _reflns.pdbx_redundancy 5.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.77 _reflns_shell.d_res_low 2.87 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 95.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 3.01 _reflns_shell.pdbx_Rsym_value 0.359 _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.number_unique_all 1406 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CB8 _refine.ls_d_res_high 2.77 _refine.ls_d_res_low 37.95 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.100 _refine.ls_number_reflns_obs 8376 _refine.ls_R_factor_R_work 0.229 _refine.ls_R_factor_R_free 0.254 _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 438 _refine.B_iso_mean 79.482 _refine.solvent_model_param_bsol 83.049 _refine.aniso_B[1][1] -5.317 _refine.aniso_B[2][2] -5.317 _refine.aniso_B[3][3] 10.634 _refine.aniso_B[1][2] -4.595 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_method_to_determine_struct MAD _refine.overall_FOM_work_R_set 0.767 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 8376 _refine.ls_R_factor_all 0.277 _refine.ls_R_factor_obs 0.277 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error 0.012 _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ANISOTROPIC _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model Isotropic _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3CB8 _refine_analyze.Luzzati_coordinate_error_obs 0.37 _refine_analyze.Luzzati_sigma_a_obs 0.47 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.55 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1935 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 1995 _refine_hist.d_res_high 2.77 _refine_hist.d_res_low 37.95 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it ? 1.157 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 1.793 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 1.971 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 2.746 2.500 ? 'X-RAY DIFFRACTION' ? c_bond_d ? 0.009 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.5 ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d ? 23.7 ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d ? 0.66 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.77 _refine_ls_shell.d_res_low 2.84 _refine_ls_shell.number_reflns_obs 1230 _refine_ls_shell.number_reflns_R_free 54 _refine_ls_shell.R_factor_R_work 0.394 _refine_ls_shell.R_factor_R_free 0.451 _refine_ls_shell.R_factor_R_free_error 0.061 _refine_ls_shell.percent_reflns_obs 95.0 _refine_ls_shell.percent_reflns_R_free 4.2 _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.number_reflns_R_work 1230 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 ligands.param ? 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' 4 CNS_TOPPAR:ion.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 3CB8 _struct.title '4Fe-4S-Pyruvate formate-lyase activating enzyme in complex with AdoMet and a peptide substrate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CB8 _struct_keywords.text ;AdoMet radical, SAM radical, activase, glycyl radical, partial TIM barrel, 4Fe-4S, Carbohydrate metabolism, Cytoplasm, Glucose metabolism, Iron, Iron-sulfur, Metal-binding, Oxidoreductase, S-adenosyl-L-methionine ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 7 ? K N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP PFLA_ECOLI P0A9N4 1 ;SVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEA ILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKN VKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYG HKVMF ; 2 ? 2 PDB 3CB8 3CB8 2 VSGYAV 732 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CB8 A 1 ? 245 ? P0A9N4 2 ? 246 ? 1 245 2 2 3CB8 B 1 ? 6 ? 3CB8 732 ? 737 ? 732 737 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1880 ? 1 MORE -25.4 ? 1 'SSA (A^2)' 10040 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 38 ? TRP A 42 ? ASN A 38 TRP A 42 5 ? 5 HELX_P HELX_P2 2 THR A 51 ? VAL A 60 ? THR A 51 VAL A 60 1 ? 10 HELX_P HELX_P3 3 TYR A 62 ? GLY A 70 ? TYR A 62 GLY A 70 1 ? 9 HELX_P HELX_P4 4 GLU A 79 ? LEU A 82 ? GLU A 79 LEU A 82 5 ? 4 HELX_P HELX_P5 5 GLN A 83 ? LYS A 96 ? GLN A 83 LYS A 96 1 ? 14 HELX_P HELX_P6 6 ASP A 113 ? VAL A 122 ? ASP A 113 VAL A 122 1 ? 10 HELX_P HELX_P7 7 ASN A 134 ? VAL A 142 ? ASN A 134 VAL A 142 1 ? 9 HELX_P HELX_P8 8 ASN A 146 ? ASN A 158 ? ASN A 146 ASN A 158 1 ? 13 HELX_P HELX_P9 9 ASP A 176 ? MET A 190 ? ASP A 176 MET A 190 1 ? 15 HELX_P HELX_P10 10 LYS A 206 ? ALA A 211 ? LYS A 206 ALA A 211 1 ? 6 HELX_P HELX_P11 11 LYS A 225 ? GLN A 238 ? LYS A 225 GLN A 238 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 29 SG ? ? ? 1_555 E SF4 . FE4 ? ? A CYS 29 A SF4 500 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc2 metalc ? ? A CYS 33 SG ? ? ? 1_555 E SF4 . FE1 ? ? A CYS 33 A SF4 500 1_555 ? ? ? ? ? ? ? 2.254 ? ? metalc3 metalc ? ? A CYS 36 SG ? ? ? 1_555 E SF4 . FE3 ? ? A CYS 36 A SF4 500 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc4 metalc ? ? A ASP 104 OD1 ? ? ? 1_555 C NA . NA ? ? A ASP 104 A NA 820 1_555 ? ? ? ? ? ? ? 2.274 ? ? metalc5 metalc ? ? A THR 105 O ? ? ? 1_555 C NA . NA ? ? A THR 105 A NA 820 1_555 ? ? ? ? ? ? ? 2.589 ? ? metalc6 metalc ? ? A ASP 129 OD1 ? ? ? 1_555 C NA . NA ? ? A ASP 129 A NA 820 1_555 ? ? ? ? ? ? ? 2.671 ? ? metalc7 metalc ? ? E SF4 . FE2 ? ? ? 1_555 D SAM . N ? ? A SF4 500 A SAM 501 1_555 ? ? ? ? ? ? ? 2.167 ? ? metalc8 metalc ? ? E SF4 . FE2 ? ? ? 1_555 D SAM . O ? ? A SF4 500 A SAM 501 1_555 ? ? ? ? ? ? ? 2.125 ? ? metalc9 metalc ? ? D SAM . OXT ? ? ? 1_555 C NA . NA ? ? A SAM 501 A NA 820 1_555 ? ? ? ? ? ? ? 2.429 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 29 ? A CYS 29 ? 1_555 FE4 ? E SF4 . ? A SF4 500 ? 1_555 S1 ? E SF4 . ? A SF4 500 ? 1_555 114.4 ? 2 SG ? A CYS 29 ? A CYS 29 ? 1_555 FE4 ? E SF4 . ? A SF4 500 ? 1_555 S2 ? E SF4 . ? A SF4 500 ? 1_555 121.0 ? 3 S1 ? E SF4 . ? A SF4 500 ? 1_555 FE4 ? E SF4 . ? A SF4 500 ? 1_555 S2 ? E SF4 . ? A SF4 500 ? 1_555 103.6 ? 4 SG ? A CYS 29 ? A CYS 29 ? 1_555 FE4 ? E SF4 . ? A SF4 500 ? 1_555 S3 ? E SF4 . ? A SF4 500 ? 1_555 105.1 ? 5 S1 ? E SF4 . ? A SF4 500 ? 1_555 FE4 ? E SF4 . ? A SF4 500 ? 1_555 S3 ? E SF4 . ? A SF4 500 ? 1_555 106.0 ? 6 S2 ? E SF4 . ? A SF4 500 ? 1_555 FE4 ? E SF4 . ? A SF4 500 ? 1_555 S3 ? E SF4 . ? A SF4 500 ? 1_555 105.7 ? 7 SG ? A CYS 33 ? A CYS 33 ? 1_555 FE1 ? E SF4 . ? A SF4 500 ? 1_555 S2 ? E SF4 . ? A SF4 500 ? 1_555 111.8 ? 8 SG ? A CYS 33 ? A CYS 33 ? 1_555 FE1 ? E SF4 . ? A SF4 500 ? 1_555 S3 ? E SF4 . ? A SF4 500 ? 1_555 115.2 ? 9 S2 ? E SF4 . ? A SF4 500 ? 1_555 FE1 ? E SF4 . ? A SF4 500 ? 1_555 S3 ? E SF4 . ? A SF4 500 ? 1_555 105.8 ? 10 SG ? A CYS 33 ? A CYS 33 ? 1_555 FE1 ? E SF4 . ? A SF4 500 ? 1_555 S4 ? E SF4 . ? A SF4 500 ? 1_555 112.2 ? 11 S2 ? E SF4 . ? A SF4 500 ? 1_555 FE1 ? E SF4 . ? A SF4 500 ? 1_555 S4 ? E SF4 . ? A SF4 500 ? 1_555 105.7 ? 12 S3 ? E SF4 . ? A SF4 500 ? 1_555 FE1 ? E SF4 . ? A SF4 500 ? 1_555 S4 ? E SF4 . ? A SF4 500 ? 1_555 105.5 ? 13 SG ? A CYS 36 ? A CYS 36 ? 1_555 FE3 ? E SF4 . ? A SF4 500 ? 1_555 S1 ? E SF4 . ? A SF4 500 ? 1_555 121.4 ? 14 SG ? A CYS 36 ? A CYS 36 ? 1_555 FE3 ? E SF4 . ? A SF4 500 ? 1_555 S2 ? E SF4 . ? A SF4 500 ? 1_555 107.7 ? 15 S1 ? E SF4 . ? A SF4 500 ? 1_555 FE3 ? E SF4 . ? A SF4 500 ? 1_555 S2 ? E SF4 . ? A SF4 500 ? 1_555 104.5 ? 16 SG ? A CYS 36 ? A CYS 36 ? 1_555 FE3 ? E SF4 . ? A SF4 500 ? 1_555 S4 ? E SF4 . ? A SF4 500 ? 1_555 115.4 ? 17 S1 ? E SF4 . ? A SF4 500 ? 1_555 FE3 ? E SF4 . ? A SF4 500 ? 1_555 S4 ? E SF4 . ? A SF4 500 ? 1_555 100.3 ? 18 S2 ? E SF4 . ? A SF4 500 ? 1_555 FE3 ? E SF4 . ? A SF4 500 ? 1_555 S4 ? E SF4 . ? A SF4 500 ? 1_555 106.4 ? 19 OD1 ? A ASP 104 ? A ASP 104 ? 1_555 NA ? C NA . ? A NA 820 ? 1_555 O ? A THR 105 ? A THR 105 ? 1_555 130.9 ? 20 OD1 ? A ASP 104 ? A ASP 104 ? 1_555 NA ? C NA . ? A NA 820 ? 1_555 OD1 ? A ASP 129 ? A ASP 129 ? 1_555 117.0 ? 21 O ? A THR 105 ? A THR 105 ? 1_555 NA ? C NA . ? A NA 820 ? 1_555 OD1 ? A ASP 129 ? A ASP 129 ? 1_555 108.0 ? 22 OD1 ? A ASP 104 ? A ASP 104 ? 1_555 NA ? C NA . ? A NA 820 ? 1_555 OXT ? D SAM . ? A SAM 501 ? 1_555 120.7 ? 23 O ? A THR 105 ? A THR 105 ? 1_555 NA ? C NA . ? A NA 820 ? 1_555 OXT ? D SAM . ? A SAM 501 ? 1_555 83.4 ? 24 OD1 ? A ASP 129 ? A ASP 129 ? 1_555 NA ? C NA . ? A NA 820 ? 1_555 OXT ? D SAM . ? A SAM 501 ? 1_555 81.3 ? 25 N ? D SAM . ? A SAM 501 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 S1 ? E SF4 . ? A SF4 500 ? 1_555 86.9 ? 26 N ? D SAM . ? A SAM 501 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 S3 ? E SF4 . ? A SF4 500 ? 1_555 80.5 ? 27 S1 ? E SF4 . ? A SF4 500 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 S3 ? E SF4 . ? A SF4 500 ? 1_555 104.9 ? 28 N ? D SAM . ? A SAM 501 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 S4 ? E SF4 . ? A SF4 500 ? 1_555 170.6 ? 29 S1 ? E SF4 . ? A SF4 500 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 S4 ? E SF4 . ? A SF4 500 ? 1_555 99.1 ? 30 S3 ? E SF4 . ? A SF4 500 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 S4 ? E SF4 . ? A SF4 500 ? 1_555 104.7 ? 31 N ? D SAM . ? A SAM 501 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 O ? D SAM . ? A SAM 501 ? 1_555 77.1 ? 32 S1 ? E SF4 . ? A SF4 500 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 O ? D SAM . ? A SAM 501 ? 1_555 155.6 ? 33 S3 ? E SF4 . ? A SF4 500 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 O ? D SAM . ? A SAM 501 ? 1_555 90.7 ? 34 S4 ? E SF4 . ? A SF4 500 ? 1_555 FE2 ? E SF4 . ? A SF4 500 ? 1_555 O ? D SAM . ? A SAM 501 ? 1_555 94.8 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 48 ? VAL A 50 ? LYS A 48 VAL A 50 A 2 GLY A 4 ? GLY A 13 ? GLY A 4 GLY A 13 A 3 ARG A 21 ? PHE A 26 ? ARG A 21 PHE A 26 A 4 GLY A 72 ? GLY A 77 ? GLY A 72 GLY A 77 A 5 THR A 101 ? THR A 105 ? THR A 101 THR A 105 A 6 LEU A 125 ? ASP A 129 ? LEU A 125 ASP A 129 A 7 VAL A 163 ? VAL A 169 ? VAL A 163 VAL A 169 A 8 VAL A 193 ? PRO A 200 ? VAL A 193 PRO A 200 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 50 ? O VAL A 50 N GLY A 4 ? N GLY A 4 A 2 3 N SER A 8 ? N SER A 8 O PHE A 25 ? O PHE A 25 A 3 4 N THR A 24 ? N THR A 24 O SER A 76 ? O SER A 76 A 4 5 N ALA A 75 ? N ALA A 75 O ASP A 104 ? O ASP A 104 A 5 6 N LEU A 103 ? N LEU A 103 O LEU A 125 ? O LEU A 125 A 6 7 N LEU A 128 ? N LEU A 128 O ARG A 166 ? O ARG A 166 A 7 8 N VAL A 169 ? N VAL A 169 O LEU A 199 ? O LEU A 199 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 820 ? 4 'BINDING SITE FOR RESIDUE NA A 820' AC2 Software A SAM 501 ? 17 'BINDING SITE FOR RESIDUE SAM A 501' AC3 Software A SF4 500 ? 7 'BINDING SITE FOR RESIDUE SF4 A 500' AC4 Software A FMT 502 ? 4 'BINDING SITE FOR RESIDUE FMT A 502' AC5 Software A FMT 503 ? 2 'BINDING SITE FOR RESIDUE FMT A 503' AC6 Software A FMT 504 ? 3 'BINDING SITE FOR RESIDUE FMT A 504' AC7 Software A FMT 505 ? 2 'BINDING SITE FOR RESIDUE FMT A 505' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP A 104 ? ASP A 104 . ? 1_555 ? 2 AC1 4 THR A 105 ? THR A 105 . ? 1_555 ? 3 AC1 4 MET A 127 ? MET A 127 . ? 1_555 ? 4 AC1 4 ASP A 129 ? ASP A 129 . ? 1_555 ? 5 AC2 17 TYR A 35 ? TYR A 35 . ? 1_555 ? 6 AC2 17 CYS A 36 ? CYS A 36 . ? 1_555 ? 7 AC2 17 HIS A 37 ? HIS A 37 . ? 1_555 ? 8 AC2 17 ASN A 38 ? ASN A 38 . ? 1_555 ? 9 AC2 17 SER A 76 ? SER A 76 . ? 1_555 ? 10 AC2 17 GLY A 77 ? GLY A 77 . ? 1_555 ? 11 AC2 17 GLY A 78 ? GLY A 78 . ? 1_555 ? 12 AC2 17 GLU A 79 ? GLU A 79 . ? 1_555 ? 13 AC2 17 ASP A 104 ? ASP A 104 . ? 1_555 ? 14 AC2 17 THR A 105 ? THR A 105 . ? 1_555 ? 15 AC2 17 ASP A 129 ? ASP A 129 . ? 1_555 ? 16 AC2 17 LYS A 131 ? LYS A 131 . ? 1_555 ? 17 AC2 17 LEU A 199 ? LEU A 199 . ? 1_555 ? 18 AC2 17 PRO A 200 ? PRO A 200 . ? 1_555 ? 19 AC2 17 TYR A 201 ? TYR A 201 . ? 1_555 ? 20 AC2 17 HIS A 202 ? HIS A 202 . ? 1_555 ? 21 AC2 17 SER B 2 ? SER B 733 . ? 1_555 ? 22 AC3 7 CYS A 29 ? CYS A 29 . ? 1_555 ? 23 AC3 7 MET A 31 ? MET A 31 . ? 1_555 ? 24 AC3 7 CYS A 33 ? CYS A 33 . ? 1_555 ? 25 AC3 7 CYS A 36 ? CYS A 36 . ? 1_555 ? 26 AC3 7 TRP A 42 ? TRP A 42 . ? 1_555 ? 27 AC3 7 GLY A 78 ? GLY A 78 . ? 1_555 ? 28 AC3 7 ASN A 106 ? ASN A 106 . ? 1_555 ? 29 AC4 4 GLY A 17 ? GLY A 17 . ? 1_555 ? 30 AC4 4 TRP A 164 ? TRP A 164 . ? 1_555 ? 31 AC4 4 ARG A 166 ? ARG A 166 . ? 1_555 ? 32 AC4 4 GLU A 197 ? GLU A 197 . ? 1_555 ? 33 AC5 2 ASP A 113 ? ASP A 113 . ? 1_555 ? 34 AC5 2 GLU A 214 ? GLU A 214 . ? 12_545 ? 35 AC6 3 PHE A 108 ? PHE A 108 . ? 1_555 ? 36 AC6 3 ARG A 110 ? ARG A 110 . ? 1_555 ? 37 AC6 3 ARG A 111 ? ARG A 111 . ? 1_555 ? 38 AC7 2 ARG A 32 ? ARG A 32 . ? 12_545 ? 39 AC7 2 ARG A 110 ? ARG A 110 . ? 1_555 ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GLY _pdbx_validate_rmsd_angle.auth_seq_id_1 78 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 GLY _pdbx_validate_rmsd_angle.auth_seq_id_2 78 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 GLY _pdbx_validate_rmsd_angle.auth_seq_id_3 78 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 97.47 _pdbx_validate_rmsd_angle.angle_target_value 113.10 _pdbx_validate_rmsd_angle.angle_deviation -15.63 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 8 ? ? -172.69 -173.31 2 1 CYS A 12 ? ? -171.52 84.61 3 1 ARG A 32 ? ? -140.70 49.22 4 1 CYS A 36 ? ? -38.17 118.04 5 1 ASN A 38 ? ? -119.56 55.92 6 1 LYS A 57 ? ? -60.88 6.82 7 1 GLU A 58 ? ? -134.09 -46.66 8 1 SER A 76 ? ? -149.78 -134.60 9 1 ILE A 81 ? ? -58.11 -8.44 10 1 LYS A 96 ? ? -69.71 2.80 11 1 GLN A 132 ? ? 179.95 112.75 12 1 ASN A 158 ? ? -57.66 -5.55 13 1 LYS A 162 ? ? -54.75 104.52 14 1 LEU A 204 ? ? 178.48 132.34 15 1 LEU A 218 ? ? -56.57 2.39 16 1 LYS A 242 ? ? -78.61 35.91 17 1 VAL A 243 ? ? -36.46 88.95 # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.900 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 12853 _diffrn_reflns.pdbx_Rmerge_I_obs 0.098 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.05 _diffrn_reflns.av_sigmaI_over_netI 14.20 _diffrn_reflns.pdbx_redundancy 9.80 _diffrn_reflns.pdbx_percent_possible_obs 98.50 _diffrn_reflns.number 125568 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 6.24 50.00 ? ? 0.060 ? 1.002 10.40 99.80 1 4.96 6.24 ? ? 0.085 ? 1.032 10.70 100.00 1 4.33 4.96 ? ? 0.091 ? 1.048 10.70 100.00 1 3.94 4.33 ? ? 0.108 ? 1.072 10.60 100.00 1 3.65 3.94 ? ? 0.132 ? 1.089 10.60 100.00 1 3.44 3.65 ? ? 0.190 ? 1.122 10.60 100.00 1 3.27 3.44 ? ? 0.243 ? 1.021 10.40 100.00 1 3.12 3.27 ? ? 0.345 ? 1.030 9.60 100.00 1 3.00 3.12 ? ? 0.394 ? 1.050 7.70 98.10 1 2.90 3.00 ? ? 0.420 ? 1.018 5.80 87.60 # _phasing.method MAD # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FMT C C N N 88 FMT O1 O N N 89 FMT O2 O N N 90 FMT H H N N 91 FMT HO2 H N N 92 GLN N N N N 93 GLN CA C N S 94 GLN C C N N 95 GLN O O N N 96 GLN CB C N N 97 GLN CG C N N 98 GLN CD C N N 99 GLN OE1 O N N 100 GLN NE2 N N N 101 GLN OXT O N N 102 GLN H H N N 103 GLN H2 H N N 104 GLN HA H N N 105 GLN HB2 H N N 106 GLN HB3 H N N 107 GLN HG2 H N N 108 GLN HG3 H N N 109 GLN HE21 H N N 110 GLN HE22 H N N 111 GLN HXT H N N 112 GLU N N N N 113 GLU CA C N S 114 GLU C C N N 115 GLU O O N N 116 GLU CB C N N 117 GLU CG C N N 118 GLU CD C N N 119 GLU OE1 O N N 120 GLU OE2 O N N 121 GLU OXT O N N 122 GLU H H N N 123 GLU H2 H N N 124 GLU HA H N N 125 GLU HB2 H N N 126 GLU HB3 H N N 127 GLU HG2 H N N 128 GLU HG3 H N N 129 GLU HE2 H N N 130 GLU HXT H N N 131 GLY N N N N 132 GLY CA C N N 133 GLY C C N N 134 GLY O O N N 135 GLY OXT O N N 136 GLY H H N N 137 GLY H2 H N N 138 GLY HA2 H N N 139 GLY HA3 H N N 140 GLY HXT H N N 141 HIS N N N N 142 HIS CA C N S 143 HIS C C N N 144 HIS O O N N 145 HIS CB C N N 146 HIS CG C Y N 147 HIS ND1 N Y N 148 HIS CD2 C Y N 149 HIS CE1 C Y N 150 HIS NE2 N Y N 151 HIS OXT O N N 152 HIS H H N N 153 HIS H2 H N N 154 HIS HA H N N 155 HIS HB2 H N N 156 HIS HB3 H N N 157 HIS HD1 H N N 158 HIS HD2 H N N 159 HIS HE1 H N N 160 HIS HE2 H N N 161 HIS HXT H N N 162 HOH O O N N 163 HOH H1 H N N 164 HOH H2 H N N 165 ILE N N N N 166 ILE CA C N S 167 ILE C C N N 168 ILE O O N N 169 ILE CB C N S 170 ILE CG1 C N N 171 ILE CG2 C N N 172 ILE CD1 C N N 173 ILE OXT O N N 174 ILE H H N N 175 ILE H2 H N N 176 ILE HA H N N 177 ILE HB H N N 178 ILE HG12 H N N 179 ILE HG13 H N N 180 ILE HG21 H N N 181 ILE HG22 H N N 182 ILE HG23 H N N 183 ILE HD11 H N N 184 ILE HD12 H N N 185 ILE HD13 H N N 186 ILE HXT H N N 187 LEU N N N N 188 LEU CA C N S 189 LEU C C N N 190 LEU O O N N 191 LEU CB C N N 192 LEU CG C N N 193 LEU CD1 C N N 194 LEU CD2 C N N 195 LEU OXT O N N 196 LEU H H N N 197 LEU H2 H N N 198 LEU HA H N N 199 LEU HB2 H N N 200 LEU HB3 H N N 201 LEU HG H N N 202 LEU HD11 H N N 203 LEU HD12 H N N 204 LEU HD13 H N N 205 LEU HD21 H N N 206 LEU HD22 H N N 207 LEU HD23 H N N 208 LEU HXT H N N 209 LYS N N N N 210 LYS CA C N S 211 LYS C C N N 212 LYS O O N N 213 LYS CB C N N 214 LYS CG C N N 215 LYS CD C N N 216 LYS CE C N N 217 LYS NZ N N N 218 LYS OXT O N N 219 LYS H H N N 220 LYS H2 H N N 221 LYS HA H N N 222 LYS HB2 H N N 223 LYS HB3 H N N 224 LYS HG2 H N N 225 LYS HG3 H N N 226 LYS HD2 H N N 227 LYS HD3 H N N 228 LYS HE2 H N N 229 LYS HE3 H N N 230 LYS HZ1 H N N 231 LYS HZ2 H N N 232 LYS HZ3 H N N 233 LYS HXT H N N 234 MET N N N N 235 MET CA C N S 236 MET C C N N 237 MET O O N N 238 MET CB C N N 239 MET CG C N N 240 MET SD S N N 241 MET CE C N N 242 MET OXT O N N 243 MET H H N N 244 MET H2 H N N 245 MET HA H N N 246 MET HB2 H N N 247 MET HB3 H N N 248 MET HG2 H N N 249 MET HG3 H N N 250 MET HE1 H N N 251 MET HE2 H N N 252 MET HE3 H N N 253 MET HXT H N N 254 NA NA NA N N 255 PHE N N N N 256 PHE CA C N S 257 PHE C C N N 258 PHE O O N N 259 PHE CB C N N 260 PHE CG C Y N 261 PHE CD1 C Y N 262 PHE CD2 C Y N 263 PHE CE1 C Y N 264 PHE CE2 C Y N 265 PHE CZ C Y N 266 PHE OXT O N N 267 PHE H H N N 268 PHE H2 H N N 269 PHE HA H N N 270 PHE HB2 H N N 271 PHE HB3 H N N 272 PHE HD1 H N N 273 PHE HD2 H N N 274 PHE HE1 H N N 275 PHE HE2 H N N 276 PHE HZ H N N 277 PHE HXT H N N 278 PRO N N N N 279 PRO CA C N S 280 PRO C C N N 281 PRO O O N N 282 PRO CB C N N 283 PRO CG C N N 284 PRO CD C N N 285 PRO OXT O N N 286 PRO H H N N 287 PRO HA H N N 288 PRO HB2 H N N 289 PRO HB3 H N N 290 PRO HG2 H N N 291 PRO HG3 H N N 292 PRO HD2 H N N 293 PRO HD3 H N N 294 PRO HXT H N N 295 SAM N N N N 296 SAM CA C N S 297 SAM C C N N 298 SAM O O N N 299 SAM OXT O N N 300 SAM CB C N N 301 SAM CG C N N 302 SAM SD S N S 303 SAM CE C N N 304 SAM "C5'" C N N 305 SAM "C4'" C N S 306 SAM "O4'" O N N 307 SAM "C3'" C N S 308 SAM "O3'" O N N 309 SAM "C2'" C N R 310 SAM "O2'" O N N 311 SAM "C1'" C N R 312 SAM N9 N Y N 313 SAM C8 C Y N 314 SAM N7 N Y N 315 SAM C5 C Y N 316 SAM C6 C Y N 317 SAM N6 N N N 318 SAM N1 N Y N 319 SAM C2 C Y N 320 SAM N3 N Y N 321 SAM C4 C Y N 322 SAM HN1 H N N 323 SAM HN2 H N N 324 SAM HA H N N 325 SAM HB1 H N N 326 SAM HB2 H N N 327 SAM HG1 H N N 328 SAM HG2 H N N 329 SAM HE1 H N N 330 SAM HE2 H N N 331 SAM HE3 H N N 332 SAM "H5'1" H N N 333 SAM "H5'2" H N N 334 SAM "H4'" H N N 335 SAM "H3'" H N N 336 SAM "HO3'" H N N 337 SAM "H2'" H N N 338 SAM "HO2'" H N N 339 SAM "H1'" H N N 340 SAM H8 H N N 341 SAM HN61 H N N 342 SAM HN62 H N N 343 SAM H2 H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 SF4 FE1 FE N N 359 SF4 FE2 FE N N 360 SF4 FE3 FE N N 361 SF4 FE4 FE N N 362 SF4 S1 S N N 363 SF4 S2 S N N 364 SF4 S3 S N N 365 SF4 S4 S N N 366 THR N N N N 367 THR CA C N S 368 THR C C N N 369 THR O O N N 370 THR CB C N R 371 THR OG1 O N N 372 THR CG2 C N N 373 THR OXT O N N 374 THR H H N N 375 THR H2 H N N 376 THR HA H N N 377 THR HB H N N 378 THR HG1 H N N 379 THR HG21 H N N 380 THR HG22 H N N 381 THR HG23 H N N 382 THR HXT H N N 383 TRP N N N N 384 TRP CA C N S 385 TRP C C N N 386 TRP O O N N 387 TRP CB C N N 388 TRP CG C Y N 389 TRP CD1 C Y N 390 TRP CD2 C Y N 391 TRP NE1 N Y N 392 TRP CE2 C Y N 393 TRP CE3 C Y N 394 TRP CZ2 C Y N 395 TRP CZ3 C Y N 396 TRP CH2 C Y N 397 TRP OXT O N N 398 TRP H H N N 399 TRP H2 H N N 400 TRP HA H N N 401 TRP HB2 H N N 402 TRP HB3 H N N 403 TRP HD1 H N N 404 TRP HE1 H N N 405 TRP HE3 H N N 406 TRP HZ2 H N N 407 TRP HZ3 H N N 408 TRP HH2 H N N 409 TRP HXT H N N 410 TYR N N N N 411 TYR CA C N S 412 TYR C C N N 413 TYR O O N N 414 TYR CB C N N 415 TYR CG C Y N 416 TYR CD1 C Y N 417 TYR CD2 C Y N 418 TYR CE1 C Y N 419 TYR CE2 C Y N 420 TYR CZ C Y N 421 TYR OH O N N 422 TYR OXT O N N 423 TYR H H N N 424 TYR H2 H N N 425 TYR HA H N N 426 TYR HB2 H N N 427 TYR HB3 H N N 428 TYR HD1 H N N 429 TYR HD2 H N N 430 TYR HE1 H N N 431 TYR HE2 H N N 432 TYR HH H N N 433 TYR HXT H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FMT C O1 doub N N 83 FMT C O2 sing N N 84 FMT C H sing N N 85 FMT O2 HO2 sing N N 86 GLN N CA sing N N 87 GLN N H sing N N 88 GLN N H2 sing N N 89 GLN CA C sing N N 90 GLN CA CB sing N N 91 GLN CA HA sing N N 92 GLN C O doub N N 93 GLN C OXT sing N N 94 GLN CB CG sing N N 95 GLN CB HB2 sing N N 96 GLN CB HB3 sing N N 97 GLN CG CD sing N N 98 GLN CG HG2 sing N N 99 GLN CG HG3 sing N N 100 GLN CD OE1 doub N N 101 GLN CD NE2 sing N N 102 GLN NE2 HE21 sing N N 103 GLN NE2 HE22 sing N N 104 GLN OXT HXT sing N N 105 GLU N CA sing N N 106 GLU N H sing N N 107 GLU N H2 sing N N 108 GLU CA C sing N N 109 GLU CA CB sing N N 110 GLU CA HA sing N N 111 GLU C O doub N N 112 GLU C OXT sing N N 113 GLU CB CG sing N N 114 GLU CB HB2 sing N N 115 GLU CB HB3 sing N N 116 GLU CG CD sing N N 117 GLU CG HG2 sing N N 118 GLU CG HG3 sing N N 119 GLU CD OE1 doub N N 120 GLU CD OE2 sing N N 121 GLU OE2 HE2 sing N N 122 GLU OXT HXT sing N N 123 GLY N CA sing N N 124 GLY N H sing N N 125 GLY N H2 sing N N 126 GLY CA C sing N N 127 GLY CA HA2 sing N N 128 GLY CA HA3 sing N N 129 GLY C O doub N N 130 GLY C OXT sing N N 131 GLY OXT HXT sing N N 132 HIS N CA sing N N 133 HIS N H sing N N 134 HIS N H2 sing N N 135 HIS CA C sing N N 136 HIS CA CB sing N N 137 HIS CA HA sing N N 138 HIS C O doub N N 139 HIS C OXT sing N N 140 HIS CB CG sing N N 141 HIS CB HB2 sing N N 142 HIS CB HB3 sing N N 143 HIS CG ND1 sing Y N 144 HIS CG CD2 doub Y N 145 HIS ND1 CE1 doub Y N 146 HIS ND1 HD1 sing N N 147 HIS CD2 NE2 sing Y N 148 HIS CD2 HD2 sing N N 149 HIS CE1 NE2 sing Y N 150 HIS CE1 HE1 sing N N 151 HIS NE2 HE2 sing N N 152 HIS OXT HXT sing N N 153 HOH O H1 sing N N 154 HOH O H2 sing N N 155 ILE N CA sing N N 156 ILE N H sing N N 157 ILE N H2 sing N N 158 ILE CA C sing N N 159 ILE CA CB sing N N 160 ILE CA HA sing N N 161 ILE C O doub N N 162 ILE C OXT sing N N 163 ILE CB CG1 sing N N 164 ILE CB CG2 sing N N 165 ILE CB HB sing N N 166 ILE CG1 CD1 sing N N 167 ILE CG1 HG12 sing N N 168 ILE CG1 HG13 sing N N 169 ILE CG2 HG21 sing N N 170 ILE CG2 HG22 sing N N 171 ILE CG2 HG23 sing N N 172 ILE CD1 HD11 sing N N 173 ILE CD1 HD12 sing N N 174 ILE CD1 HD13 sing N N 175 ILE OXT HXT sing N N 176 LEU N CA sing N N 177 LEU N H sing N N 178 LEU N H2 sing N N 179 LEU CA C sing N N 180 LEU CA CB sing N N 181 LEU CA HA sing N N 182 LEU C O doub N N 183 LEU C OXT sing N N 184 LEU CB CG sing N N 185 LEU CB HB2 sing N N 186 LEU CB HB3 sing N N 187 LEU CG CD1 sing N N 188 LEU CG CD2 sing N N 189 LEU CG HG sing N N 190 LEU CD1 HD11 sing N N 191 LEU CD1 HD12 sing N N 192 LEU CD1 HD13 sing N N 193 LEU CD2 HD21 sing N N 194 LEU CD2 HD22 sing N N 195 LEU CD2 HD23 sing N N 196 LEU OXT HXT sing N N 197 LYS N CA sing N N 198 LYS N H sing N N 199 LYS N H2 sing N N 200 LYS CA C sing N N 201 LYS CA CB sing N N 202 LYS CA HA sing N N 203 LYS C O doub N N 204 LYS C OXT sing N N 205 LYS CB CG sing N N 206 LYS CB HB2 sing N N 207 LYS CB HB3 sing N N 208 LYS CG CD sing N N 209 LYS CG HG2 sing N N 210 LYS CG HG3 sing N N 211 LYS CD CE sing N N 212 LYS CD HD2 sing N N 213 LYS CD HD3 sing N N 214 LYS CE NZ sing N N 215 LYS CE HE2 sing N N 216 LYS CE HE3 sing N N 217 LYS NZ HZ1 sing N N 218 LYS NZ HZ2 sing N N 219 LYS NZ HZ3 sing N N 220 LYS OXT HXT sing N N 221 MET N CA sing N N 222 MET N H sing N N 223 MET N H2 sing N N 224 MET CA C sing N N 225 MET CA CB sing N N 226 MET CA HA sing N N 227 MET C O doub N N 228 MET C OXT sing N N 229 MET CB CG sing N N 230 MET CB HB2 sing N N 231 MET CB HB3 sing N N 232 MET CG SD sing N N 233 MET CG HG2 sing N N 234 MET CG HG3 sing N N 235 MET SD CE sing N N 236 MET CE HE1 sing N N 237 MET CE HE2 sing N N 238 MET CE HE3 sing N N 239 MET OXT HXT sing N N 240 PHE N CA sing N N 241 PHE N H sing N N 242 PHE N H2 sing N N 243 PHE CA C sing N N 244 PHE CA CB sing N N 245 PHE CA HA sing N N 246 PHE C O doub N N 247 PHE C OXT sing N N 248 PHE CB CG sing N N 249 PHE CB HB2 sing N N 250 PHE CB HB3 sing N N 251 PHE CG CD1 doub Y N 252 PHE CG CD2 sing Y N 253 PHE CD1 CE1 sing Y N 254 PHE CD1 HD1 sing N N 255 PHE CD2 CE2 doub Y N 256 PHE CD2 HD2 sing N N 257 PHE CE1 CZ doub Y N 258 PHE CE1 HE1 sing N N 259 PHE CE2 CZ sing Y N 260 PHE CE2 HE2 sing N N 261 PHE CZ HZ sing N N 262 PHE OXT HXT sing N N 263 PRO N CA sing N N 264 PRO N CD sing N N 265 PRO N H sing N N 266 PRO CA C sing N N 267 PRO CA CB sing N N 268 PRO CA HA sing N N 269 PRO C O doub N N 270 PRO C OXT sing N N 271 PRO CB CG sing N N 272 PRO CB HB2 sing N N 273 PRO CB HB3 sing N N 274 PRO CG CD sing N N 275 PRO CG HG2 sing N N 276 PRO CG HG3 sing N N 277 PRO CD HD2 sing N N 278 PRO CD HD3 sing N N 279 PRO OXT HXT sing N N 280 SAM N CA sing N N 281 SAM N HN1 sing N N 282 SAM N HN2 sing N N 283 SAM CA C sing N N 284 SAM CA CB sing N N 285 SAM CA HA sing N N 286 SAM C O doub N N 287 SAM C OXT sing N N 288 SAM CB CG sing N N 289 SAM CB HB1 sing N N 290 SAM CB HB2 sing N N 291 SAM CG SD sing N N 292 SAM CG HG1 sing N N 293 SAM CG HG2 sing N N 294 SAM SD CE sing N N 295 SAM SD "C5'" sing N N 296 SAM CE HE1 sing N N 297 SAM CE HE2 sing N N 298 SAM CE HE3 sing N N 299 SAM "C5'" "C4'" sing N N 300 SAM "C5'" "H5'1" sing N N 301 SAM "C5'" "H5'2" sing N N 302 SAM "C4'" "O4'" sing N N 303 SAM "C4'" "C3'" sing N N 304 SAM "C4'" "H4'" sing N N 305 SAM "O4'" "C1'" sing N N 306 SAM "C3'" "O3'" sing N N 307 SAM "C3'" "C2'" sing N N 308 SAM "C3'" "H3'" sing N N 309 SAM "O3'" "HO3'" sing N N 310 SAM "C2'" "O2'" sing N N 311 SAM "C2'" "C1'" sing N N 312 SAM "C2'" "H2'" sing N N 313 SAM "O2'" "HO2'" sing N N 314 SAM "C1'" N9 sing N N 315 SAM "C1'" "H1'" sing N N 316 SAM N9 C8 sing Y N 317 SAM N9 C4 sing Y N 318 SAM C8 N7 doub Y N 319 SAM C8 H8 sing N N 320 SAM N7 C5 sing Y N 321 SAM C5 C6 sing Y N 322 SAM C5 C4 doub Y N 323 SAM C6 N6 sing N N 324 SAM C6 N1 doub Y N 325 SAM N6 HN61 sing N N 326 SAM N6 HN62 sing N N 327 SAM N1 C2 sing Y N 328 SAM C2 N3 doub Y N 329 SAM C2 H2 sing N N 330 SAM N3 C4 sing Y N 331 SER N CA sing N N 332 SER N H sing N N 333 SER N H2 sing N N 334 SER CA C sing N N 335 SER CA CB sing N N 336 SER CA HA sing N N 337 SER C O doub N N 338 SER C OXT sing N N 339 SER CB OG sing N N 340 SER CB HB2 sing N N 341 SER CB HB3 sing N N 342 SER OG HG sing N N 343 SER OXT HXT sing N N 344 SF4 FE1 S2 sing N N 345 SF4 FE1 S3 sing N N 346 SF4 FE1 S4 sing N N 347 SF4 FE2 S1 sing N N 348 SF4 FE2 S3 sing N N 349 SF4 FE2 S4 sing N N 350 SF4 FE3 S1 sing N N 351 SF4 FE3 S2 sing N N 352 SF4 FE3 S4 sing N N 353 SF4 FE4 S1 sing N N 354 SF4 FE4 S2 sing N N 355 SF4 FE4 S3 sing N N 356 THR N CA sing N N 357 THR N H sing N N 358 THR N H2 sing N N 359 THR CA C sing N N 360 THR CA CB sing N N 361 THR CA HA sing N N 362 THR C O doub N N 363 THR C OXT sing N N 364 THR CB OG1 sing N N 365 THR CB CG2 sing N N 366 THR CB HB sing N N 367 THR OG1 HG1 sing N N 368 THR CG2 HG21 sing N N 369 THR CG2 HG22 sing N N 370 THR CG2 HG23 sing N N 371 THR OXT HXT sing N N 372 TRP N CA sing N N 373 TRP N H sing N N 374 TRP N H2 sing N N 375 TRP CA C sing N N 376 TRP CA CB sing N N 377 TRP CA HA sing N N 378 TRP C O doub N N 379 TRP C OXT sing N N 380 TRP CB CG sing N N 381 TRP CB HB2 sing N N 382 TRP CB HB3 sing N N 383 TRP CG CD1 doub Y N 384 TRP CG CD2 sing Y N 385 TRP CD1 NE1 sing Y N 386 TRP CD1 HD1 sing N N 387 TRP CD2 CE2 doub Y N 388 TRP CD2 CE3 sing Y N 389 TRP NE1 CE2 sing Y N 390 TRP NE1 HE1 sing N N 391 TRP CE2 CZ2 sing Y N 392 TRP CE3 CZ3 doub Y N 393 TRP CE3 HE3 sing N N 394 TRP CZ2 CH2 doub Y N 395 TRP CZ2 HZ2 sing N N 396 TRP CZ3 CH2 sing Y N 397 TRP CZ3 HZ3 sing N N 398 TRP CH2 HH2 sing N N 399 TRP OXT HXT sing N N 400 TYR N CA sing N N 401 TYR N H sing N N 402 TYR N H2 sing N N 403 TYR CA C sing N N 404 TYR CA CB sing N N 405 TYR CA HA sing N N 406 TYR C O doub N N 407 TYR C OXT sing N N 408 TYR CB CG sing N N 409 TYR CB HB2 sing N N 410 TYR CB HB3 sing N N 411 TYR CG CD1 doub Y N 412 TYR CG CD2 sing Y N 413 TYR CD1 CE1 sing Y N 414 TYR CD1 HD1 sing N N 415 TYR CD2 CE2 doub Y N 416 TYR CD2 HD2 sing N N 417 TYR CE1 CZ doub Y N 418 TYR CE1 HE1 sing N N 419 TYR CE2 CZ sing Y N 420 TYR CE2 HE2 sing N N 421 TYR CZ OH sing N N 422 TYR OH HH sing N N 423 TYR OXT HXT sing N N 424 VAL N CA sing N N 425 VAL N H sing N N 426 VAL N H2 sing N N 427 VAL CA C sing N N 428 VAL CA CB sing N N 429 VAL CA HA sing N N 430 VAL C O doub N N 431 VAL C OXT sing N N 432 VAL CB CG1 sing N N 433 VAL CB CG2 sing N N 434 VAL CB HB sing N N 435 VAL CG1 HG11 sing N N 436 VAL CG1 HG12 sing N N 437 VAL CG1 HG13 sing N N 438 VAL CG2 HG21 sing N N 439 VAL CG2 HG22 sing N N 440 VAL CG2 HG23 sing N N 441 VAL OXT HXT sing N N 442 # _atom_sites.entry_id 3CB8 _atom_sites.fract_transf_matrix[1][1] 0.013424 _atom_sites.fract_transf_matrix[1][2] 0.007750 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015501 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005327 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N NA O S # loop_