data_3CBM # _entry.id 3CBM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3CBM RCSB RCSB046579 WWPDB D_1000046579 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3CBO 'Set7/9-ER-AdoHcy complex' unspecified PDB 3CBP 'Set7/9-ER-Sinefungin complex' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3CBM _pdbx_database_status.recvd_initial_deposition_date 2008-02-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cheng, X.' 1 'Jia, D.' 2 # _citation.id primary _citation.title 'Regulation of estrogen receptor alpha by the SET7 lysine methyltransferase.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 30 _citation.page_first 336 _citation.page_last 347 _citation.year 2008 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18471979 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2008.03.022 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Subramanian, K.' 1 primary 'Jia, D.' 2 primary 'Kapoor-Vazirani, P.' 3 primary 'Powell, D.R.' 4 primary 'Collins, R.E.' 5 primary 'Sharma, D.' 6 primary 'Peng, J.' 7 primary 'Cheng, X.' 8 primary 'Vertino, P.M.' 9 # _cell.entry_id 3CBM _cell.length_a 102.338 _cell.length_b 38.902 _cell.length_c 66.812 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CBM _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 18 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histone-lysine N-methyltransferase SETD7' 28563.785 1 2.1.1.43 ? 'UNP residues 111-366' ? 2 polymer syn 'Estrogen receptor' 1161.419 1 ? ? 'UNP residues 298-307' ? 3 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 4 non-polymer syn BETA-MERCAPTOETHANOL 78.133 3 ? ? ? ? 5 water nat water 18.015 155 ? ? ? ? # loop_ _entity_keywords.entity_id _entity_keywords.text 1 'catalytic domain' 2 'ER peptide' # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Histone H3-K4 methyltransferase SETD7,H3-K4-HMTase SETD7,Lysine N-methyltransferase 7,SET domain-containing protein 7,SET7/9' 2 'ER, Estradiol receptor, ER-alpha, Nuclear receptor subfamily 3 group A member 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;KDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSV YHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSLD EETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAP EWYQVELKAFQATQQK ; ;KDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSV YHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSLD EETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAP EWYQVELKAFQATQQK ; A ? 2 'polypeptide(L)' no yes 'IKRS(MLZ)KNSLA' IKRSKKNSLA B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ASP n 1 3 ASN n 1 4 ILE n 1 5 ARG n 1 6 HIS n 1 7 GLY n 1 8 VAL n 1 9 CYS n 1 10 TRP n 1 11 ILE n 1 12 TYR n 1 13 TYR n 1 14 PRO n 1 15 ASP n 1 16 GLY n 1 17 GLY n 1 18 SER n 1 19 LEU n 1 20 VAL n 1 21 GLY n 1 22 GLU n 1 23 VAL n 1 24 ASN n 1 25 GLU n 1 26 ASP n 1 27 GLY n 1 28 GLU n 1 29 MET n 1 30 THR n 1 31 GLY n 1 32 GLU n 1 33 LYS n 1 34 ILE n 1 35 ALA n 1 36 TYR n 1 37 VAL n 1 38 TYR n 1 39 PRO n 1 40 ASP n 1 41 GLU n 1 42 ARG n 1 43 THR n 1 44 ALA n 1 45 LEU n 1 46 TYR n 1 47 GLY n 1 48 LYS n 1 49 PHE n 1 50 ILE n 1 51 ASP n 1 52 GLY n 1 53 GLU n 1 54 MET n 1 55 ILE n 1 56 GLU n 1 57 GLY n 1 58 LYS n 1 59 LEU n 1 60 ALA n 1 61 THR n 1 62 LEU n 1 63 MET n 1 64 SER n 1 65 THR n 1 66 GLU n 1 67 GLU n 1 68 GLY n 1 69 ARG n 1 70 PRO n 1 71 HIS n 1 72 PHE n 1 73 GLU n 1 74 LEU n 1 75 MET n 1 76 PRO n 1 77 GLY n 1 78 ASN n 1 79 SER n 1 80 VAL n 1 81 TYR n 1 82 HIS n 1 83 PHE n 1 84 ASP n 1 85 LYS n 1 86 SER n 1 87 THR n 1 88 SER n 1 89 SER n 1 90 CYS n 1 91 ILE n 1 92 SER n 1 93 THR n 1 94 ASN n 1 95 ALA n 1 96 LEU n 1 97 LEU n 1 98 PRO n 1 99 ASP n 1 100 PRO n 1 101 TYR n 1 102 GLU n 1 103 SER n 1 104 GLU n 1 105 ARG n 1 106 VAL n 1 107 TYR n 1 108 VAL n 1 109 ALA n 1 110 GLU n 1 111 SER n 1 112 LEU n 1 113 ILE n 1 114 SER n 1 115 SER n 1 116 ALA n 1 117 GLY n 1 118 GLU n 1 119 GLY n 1 120 LEU n 1 121 PHE n 1 122 SER n 1 123 LYS n 1 124 VAL n 1 125 ALA n 1 126 VAL n 1 127 GLY n 1 128 PRO n 1 129 ASN n 1 130 THR n 1 131 VAL n 1 132 MET n 1 133 SER n 1 134 PHE n 1 135 TYR n 1 136 ASN n 1 137 GLY n 1 138 VAL n 1 139 ARG n 1 140 ILE n 1 141 THR n 1 142 HIS n 1 143 GLN n 1 144 GLU n 1 145 VAL n 1 146 ASP n 1 147 SER n 1 148 ARG n 1 149 ASP n 1 150 TRP n 1 151 ALA n 1 152 LEU n 1 153 ASN n 1 154 GLY n 1 155 ASN n 1 156 THR n 1 157 LEU n 1 158 SER n 1 159 LEU n 1 160 ASP n 1 161 GLU n 1 162 GLU n 1 163 THR n 1 164 VAL n 1 165 ILE n 1 166 ASP n 1 167 VAL n 1 168 PRO n 1 169 GLU n 1 170 PRO n 1 171 TYR n 1 172 ASN n 1 173 HIS n 1 174 VAL n 1 175 SER n 1 176 LYS n 1 177 TYR n 1 178 CYS n 1 179 ALA n 1 180 SER n 1 181 LEU n 1 182 GLY n 1 183 HIS n 1 184 LYS n 1 185 ALA n 1 186 ASN n 1 187 HIS n 1 188 SER n 1 189 PHE n 1 190 THR n 1 191 PRO n 1 192 ASN n 1 193 CYS n 1 194 ILE n 1 195 TYR n 1 196 ASP n 1 197 MET n 1 198 PHE n 1 199 VAL n 1 200 HIS n 1 201 PRO n 1 202 ARG n 1 203 PHE n 1 204 GLY n 1 205 PRO n 1 206 ILE n 1 207 LYS n 1 208 CYS n 1 209 ILE n 1 210 ARG n 1 211 THR n 1 212 LEU n 1 213 ARG n 1 214 ALA n 1 215 VAL n 1 216 GLU n 1 217 ALA n 1 218 ASP n 1 219 GLU n 1 220 GLU n 1 221 LEU n 1 222 THR n 1 223 VAL n 1 224 ALA n 1 225 TYR n 1 226 GLY n 1 227 TYR n 1 228 ASP n 1 229 HIS n 1 230 SER n 1 231 PRO n 1 232 PRO n 1 233 GLY n 1 234 LYS n 1 235 SER n 1 236 GLY n 1 237 PRO n 1 238 GLU n 1 239 ALA n 1 240 PRO n 1 241 GLU n 1 242 TRP n 1 243 TYR n 1 244 GLN n 1 245 VAL n 1 246 GLU n 1 247 LEU n 1 248 LYS n 1 249 ALA n 1 250 PHE n 1 251 GLN n 1 252 ALA n 1 253 THR n 1 254 GLN n 1 255 GLN n 1 256 LYS n 2 1 ILE n 2 2 LYS n 2 3 ARG n 2 4 SER n 2 5 MLZ n 2 6 LYS n 2 7 ASN n 2 8 SER n 2 9 LEU n 2 10 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 256 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'SETD7, KIAA1717, KMT7, SET7, SET9' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)C+' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pGEX2T _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pXC408 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'ER peptide' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SETD7_HUMAN Q8WTS6 ? 1 ;KDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSV YHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSLD EETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAP EWYQVELKAFQATQQK ; 111 2 PDB 3CBM 3CBM ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CBM A 1 ? 256 ? Q8WTS6 111 ? 366 ? 111 366 2 2 3CBM B 1 ? 10 ? 3CBM 298 ? 307 ? 298 307 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLZ 'L-peptide linking' n N-METHYL-LYSINE ? 'C7 H16 N2 O2' 160.214 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3CBM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_percent_sol 44.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '40-42.5% PEG3350, 100 mM Tris, pH 8.0, VAPOR DIFFUSION' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2006-04-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3CBM _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 1.69 _reflns.d_resolution_low 25.59 _reflns.number_all ? _reflns.number_obs 27719 _reflns.percent_possible_obs 90.4 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.8 _reflns.B_iso_Wilson_estimate 20.2 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.69 _reflns_shell.d_res_low 1.75 _reflns_shell.percent_possible_all 83.7 _reflns_shell.Rmerge_I_obs 0.571 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.4 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2379 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CBM _refine.ls_d_res_high 1.69 _refine.ls_d_res_low 25.59 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27719 _refine.ls_number_reflns_R_free 1355 _refine.ls_percent_reflns_obs 90.4 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.196 _refine.ls_R_factor_R_free 0.229 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1O9S _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean 27.4 _refine.aniso_B[1][1] -1.33 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 0.76 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.56 _refine.details ;BULK SOLVENT MODELING. METHOD USED : FLAT MODEL KSOL : 0.366634 BSOL : 44.8929 (A**2) ; _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3CBM _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 0.11 _refine_analyze.Luzzati_d_res_low_obs 35.0 _refine_analyze.Luzzati_coordinate_error_free 0.23 _refine_analyze.Luzzati_sigma_a_free 0.15 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2011 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 155 _refine_hist.number_atoms_total 2204 _refine_hist.d_res_high 1.69 _refine_hist.d_res_low 25.59 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.1 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.86 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.69 _refine_ls_shell.d_res_low 1.75 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.229 _refine_ls_shell.percent_reflns_obs 83.7 _refine_ls_shell.R_factor_R_free 0.262 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 121 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 2379 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3CBM _struct.title 'SET7/9-ER-AdoMet complex' _struct.pdbx_descriptor 'Histone-lysine N-methyltransferase SETD7 (E.C.2.1.1.43), Estrogen receptor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CBM _struct_keywords.pdbx_keywords 'TRANSFERASE/TRANSFERASE RECEPTOR' _struct_keywords.text ;Estrogen receptor, protein lysine methylation, Activator, Chromatin regulator, Chromosomal protein, Methyltransferase, Nucleus, S-adenosyl-L-methionine, Transcription, Transcription regulation, Transferase, Alternative splicing, DNA-binding, Lipid-binding, Metal-binding, Phosphoprotein, Polymorphism, Steroid-binding, Zinc, Zinc-finger, TRANSFERASE-TRANSFERASE RECEPTOR COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 99 ? GLU A 104 ? ASP A 209 GLU A 214 1 ? 6 HELX_P HELX_P2 2 THR A 141 ? SER A 147 ? THR A 251 SER A 257 1 ? 7 HELX_P HELX_P3 3 ASP A 149 ? ASN A 153 ? ASP A 259 ASN A 263 5 ? 5 HELX_P HELX_P4 4 LEU A 181 ? ALA A 185 ? LEU A 291 ALA A 295 5 ? 5 HELX_P HELX_P5 5 PRO A 240 ? ALA A 252 ? PRO A 350 ALA A 362 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A CYS 9 SG B ? ? 1_555 E BME . S2 ? ? A CYS 119 A BME 396 1_555 ? ? ? ? ? ? ? 1.556 ? covale2 covale ? ? A CYS 178 SG ? ? ? 1_555 F BME . S2 ? ? A CYS 288 A BME 397 1_555 ? ? ? ? ? ? ? 2.146 ? covale3 covale ? ? A CYS 90 SG ? ? ? 1_555 D BME . S2 ? ? A CYS 200 A BME 395 1_555 ? ? ? ? ? ? ? 2.170 ? covale4 covale ? ? B SER 4 C ? ? ? 1_555 B MLZ 5 N ? ? B SER 301 B MLZ 302 1_555 ? ? ? ? ? ? ? 1.33 sing covale5 covale ? ? B MLZ 5 C ? ? ? 1_555 B LYS 6 N ? ? B MLZ 302 B LYS 303 1_555 ? ? ? ? ? ? ? 1.33 sing # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 169 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 279 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 170 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 280 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.07 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? C ? 4 ? D ? 3 ? E ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 8 ? TYR A 12 ? VAL A 118 TYR A 122 A 2 SER A 18 ? GLU A 22 ? SER A 128 GLU A 132 A 3 GLY A 31 ? VAL A 37 ? GLY A 141 VAL A 147 A 4 THR A 43 ? ILE A 50 ? THR A 153 ILE A 160 A 5 GLU A 53 ? GLU A 66 ? GLU A 163 GLU A 176 A 6 ARG A 69 ? LEU A 74 ? ARG A 179 LEU A 184 B 1 VAL A 8 ? TYR A 12 ? VAL A 118 TYR A 122 B 2 SER A 18 ? GLU A 22 ? SER A 128 GLU A 132 B 3 GLY A 31 ? VAL A 37 ? GLY A 141 VAL A 147 B 4 THR A 43 ? ILE A 50 ? THR A 153 ILE A 160 B 5 GLU A 53 ? GLU A 66 ? GLU A 163 GLU A 176 B 6 VAL A 80 ? TYR A 81 ? VAL A 190 TYR A 191 C 1 VAL A 106 ? GLU A 110 ? VAL A 216 GLU A 220 C 2 GLU A 118 ? SER A 122 ? GLU A 228 SER A 232 C 3 GLU A 220 ? VAL A 223 ? GLU A 330 VAL A 333 C 4 ASN A 186 ? HIS A 187 ? ASN A 296 HIS A 297 D 1 VAL A 131 ? TYR A 135 ? VAL A 241 TYR A 245 D 2 GLY A 204 ? THR A 211 ? GLY A 314 THR A 321 D 3 CYS A 193 ? HIS A 200 ? CYS A 303 HIS A 310 E 1 VAL A 138 ? ILE A 140 ? VAL A 248 ILE A 250 E 2 VAL A 164 ? ASP A 166 ? VAL A 274 ASP A 276 E 3 LEU A 157 ? SER A 158 ? LEU A 267 SER A 268 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 11 ? N ILE A 121 O LEU A 19 ? O LEU A 129 A 2 3 N SER A 18 ? N SER A 128 O VAL A 37 ? O VAL A 147 A 3 4 N ILE A 34 ? N ILE A 144 O GLY A 47 ? O GLY A 157 A 4 5 N TYR A 46 ? N TYR A 156 O LYS A 58 ? O LYS A 168 A 5 6 N SER A 64 ? N SER A 174 O HIS A 71 ? O HIS A 181 B 1 2 N ILE A 11 ? N ILE A 121 O LEU A 19 ? O LEU A 129 B 2 3 N SER A 18 ? N SER A 128 O VAL A 37 ? O VAL A 147 B 3 4 N ILE A 34 ? N ILE A 144 O GLY A 47 ? O GLY A 157 B 4 5 N TYR A 46 ? N TYR A 156 O LYS A 58 ? O LYS A 168 B 5 6 N GLY A 57 ? N GLY A 167 O TYR A 81 ? O TYR A 191 C 1 2 N TYR A 107 ? N TYR A 217 O PHE A 121 ? O PHE A 231 C 2 3 N LEU A 120 ? N LEU A 230 O LEU A 221 ? O LEU A 331 C 3 4 O VAL A 223 ? O VAL A 333 N ASN A 186 ? N ASN A 296 D 1 2 N MET A 132 ? N MET A 242 O ILE A 209 ? O ILE A 319 D 2 3 O CYS A 208 ? O CYS A 318 N ASP A 196 ? N ASP A 306 E 1 2 N ILE A 140 ? N ILE A 250 O VAL A 164 ? O VAL A 274 E 2 3 O ILE A 165 ? O ILE A 275 N LEU A 157 ? N LEU A 267 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE SAH A 1' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE BME A 395' AC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE BME A 396' AC4 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE BME A 397' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 ALA A 116 ? ALA A 226 . ? 1_555 ? 2 AC1 11 GLU A 118 ? GLU A 228 . ? 1_555 ? 3 AC1 11 GLY A 154 ? GLY A 264 . ? 1_555 ? 4 AC1 11 ASN A 155 ? ASN A 265 . ? 1_555 ? 5 AC1 11 HIS A 183 ? HIS A 293 . ? 1_555 ? 6 AC1 11 LYS A 184 ? LYS A 294 . ? 1_555 ? 7 AC1 11 ASN A 186 ? ASN A 296 . ? 1_555 ? 8 AC1 11 HIS A 187 ? HIS A 297 . ? 1_555 ? 9 AC1 11 TYR A 225 ? TYR A 335 . ? 1_555 ? 10 AC1 11 TRP A 242 ? TRP A 352 . ? 1_555 ? 11 AC1 11 GLU A 246 ? GLU A 356 . ? 1_555 ? 12 AC2 5 ASP A 84 ? ASP A 194 . ? 1_555 ? 13 AC2 5 LYS A 85 ? LYS A 195 . ? 1_555 ? 14 AC2 5 CYS A 90 ? CYS A 200 . ? 1_555 ? 15 AC2 5 SER A 92 ? SER A 202 . ? 1_555 ? 16 AC2 5 GLU A 162 ? GLU A 272 . ? 3_556 ? 17 AC3 1 CYS A 9 ? CYS A 119 . ? 1_555 ? 18 AC4 2 CYS A 178 ? CYS A 288 . ? 1_555 ? 19 AC4 2 GLU A 216 ? GLU A 326 . ? 3_555 ? # _database_PDB_matrix.entry_id 3CBM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3CBM _atom_sites.fract_transf_matrix[1][1] 0.009772 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025706 _atom_sites.fract_transf_matrix[2][3] -0.000001 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014967 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 111 ? ? ? A . n A 1 2 ASP 2 112 ? ? ? A . n A 1 3 ASN 3 113 ? ? ? A . n A 1 4 ILE 4 114 ? ? ? A . n A 1 5 ARG 5 115 ? ? ? A . n A 1 6 HIS 6 116 116 HIS HIS A . n A 1 7 GLY 7 117 117 GLY GLY A . n A 1 8 VAL 8 118 118 VAL VAL A . n A 1 9 CYS 9 119 119 CYS CYS A . n A 1 10 TRP 10 120 120 TRP TRP A . n A 1 11 ILE 11 121 121 ILE ILE A . n A 1 12 TYR 12 122 122 TYR TYR A . n A 1 13 TYR 13 123 123 TYR TYR A . n A 1 14 PRO 14 124 124 PRO PRO A . n A 1 15 ASP 15 125 125 ASP ASP A . n A 1 16 GLY 16 126 126 GLY GLY A . n A 1 17 GLY 17 127 127 GLY GLY A . n A 1 18 SER 18 128 128 SER SER A . n A 1 19 LEU 19 129 129 LEU LEU A . n A 1 20 VAL 20 130 130 VAL VAL A . n A 1 21 GLY 21 131 131 GLY GLY A . n A 1 22 GLU 22 132 132 GLU GLU A . n A 1 23 VAL 23 133 133 VAL VAL A . n A 1 24 ASN 24 134 134 ASN ASN A . n A 1 25 GLU 25 135 135 GLU ALA A . n A 1 26 ASP 26 136 136 ASP ALA A . n A 1 27 GLY 27 137 137 GLY GLY A . n A 1 28 GLU 28 138 138 GLU ALA A . n A 1 29 MET 29 139 139 MET MET A . n A 1 30 THR 30 140 140 THR THR A . n A 1 31 GLY 31 141 141 GLY GLY A . n A 1 32 GLU 32 142 142 GLU GLU A . n A 1 33 LYS 33 143 143 LYS LYS A . n A 1 34 ILE 34 144 144 ILE ILE A . n A 1 35 ALA 35 145 145 ALA ALA A . n A 1 36 TYR 36 146 146 TYR TYR A . n A 1 37 VAL 37 147 147 VAL VAL A . n A 1 38 TYR 38 148 148 TYR TYR A . n A 1 39 PRO 39 149 149 PRO PRO A . n A 1 40 ASP 40 150 150 ASP ASP A . n A 1 41 GLU 41 151 151 GLU GLU A . n A 1 42 ARG 42 152 152 ARG ARG A . n A 1 43 THR 43 153 153 THR THR A . n A 1 44 ALA 44 154 154 ALA ALA A . n A 1 45 LEU 45 155 155 LEU LEU A . n A 1 46 TYR 46 156 156 TYR TYR A . n A 1 47 GLY 47 157 157 GLY GLY A . n A 1 48 LYS 48 158 158 LYS LYS A . n A 1 49 PHE 49 159 159 PHE PHE A . n A 1 50 ILE 50 160 160 ILE ILE A . n A 1 51 ASP 51 161 161 ASP ASP A . n A 1 52 GLY 52 162 162 GLY GLY A . n A 1 53 GLU 53 163 163 GLU GLU A . n A 1 54 MET 54 164 164 MET MET A . n A 1 55 ILE 55 165 165 ILE ILE A . n A 1 56 GLU 56 166 166 GLU GLU A . n A 1 57 GLY 57 167 167 GLY GLY A . n A 1 58 LYS 58 168 168 LYS LYS A . n A 1 59 LEU 59 169 169 LEU LEU A . n A 1 60 ALA 60 170 170 ALA ALA A . n A 1 61 THR 61 171 171 THR THR A . n A 1 62 LEU 62 172 172 LEU LEU A . n A 1 63 MET 63 173 173 MET MET A . n A 1 64 SER 64 174 174 SER SER A . n A 1 65 THR 65 175 175 THR THR A . n A 1 66 GLU 66 176 176 GLU ALA A . n A 1 67 GLU 67 177 177 GLU GLU A . n A 1 68 GLY 68 178 178 GLY GLY A . n A 1 69 ARG 69 179 179 ARG ARG A . n A 1 70 PRO 70 180 180 PRO PRO A . n A 1 71 HIS 71 181 181 HIS HIS A . n A 1 72 PHE 72 182 182 PHE PHE A . n A 1 73 GLU 73 183 183 GLU GLU A . n A 1 74 LEU 74 184 184 LEU LEU A . n A 1 75 MET 75 185 185 MET MET A . n A 1 76 PRO 76 186 186 PRO PRO A . n A 1 77 GLY 77 187 187 GLY GLY A . n A 1 78 ASN 78 188 188 ASN ALA A . n A 1 79 SER 79 189 189 SER SER A . n A 1 80 VAL 80 190 190 VAL VAL A . n A 1 81 TYR 81 191 191 TYR TYR A . n A 1 82 HIS 82 192 192 HIS HIS A . n A 1 83 PHE 83 193 193 PHE PHE A . n A 1 84 ASP 84 194 194 ASP ASP A . n A 1 85 LYS 85 195 195 LYS LYS A . n A 1 86 SER 86 196 196 SER SER A . n A 1 87 THR 87 197 197 THR THR A . n A 1 88 SER 88 198 198 SER SER A . n A 1 89 SER 89 199 199 SER SER A . n A 1 90 CYS 90 200 200 CYS CYS A . n A 1 91 ILE 91 201 201 ILE ILE A . n A 1 92 SER 92 202 202 SER SER A . n A 1 93 THR 93 203 203 THR THR A . n A 1 94 ASN 94 204 204 ASN ASN A . n A 1 95 ALA 95 205 205 ALA ALA A . n A 1 96 LEU 96 206 206 LEU LEU A . n A 1 97 LEU 97 207 207 LEU LEU A . n A 1 98 PRO 98 208 208 PRO PRO A . n A 1 99 ASP 99 209 209 ASP ASP A . n A 1 100 PRO 100 210 210 PRO PRO A . n A 1 101 TYR 101 211 211 TYR TYR A . n A 1 102 GLU 102 212 212 GLU GLU A . n A 1 103 SER 103 213 213 SER SER A . n A 1 104 GLU 104 214 214 GLU GLU A . n A 1 105 ARG 105 215 215 ARG ARG A . n A 1 106 VAL 106 216 216 VAL VAL A . n A 1 107 TYR 107 217 217 TYR TYR A . n A 1 108 VAL 108 218 218 VAL VAL A . n A 1 109 ALA 109 219 219 ALA ALA A . n A 1 110 GLU 110 220 220 GLU GLU A . n A 1 111 SER 111 221 221 SER SER A . n A 1 112 LEU 112 222 222 LEU LEU A . n A 1 113 ILE 113 223 223 ILE ILE A . n A 1 114 SER 114 224 224 SER SER A . n A 1 115 SER 115 225 225 SER SER A . n A 1 116 ALA 116 226 226 ALA ALA A . n A 1 117 GLY 117 227 227 GLY GLY A . n A 1 118 GLU 118 228 228 GLU GLU A . n A 1 119 GLY 119 229 229 GLY GLY A . n A 1 120 LEU 120 230 230 LEU LEU A . n A 1 121 PHE 121 231 231 PHE PHE A . n A 1 122 SER 122 232 232 SER SER A . n A 1 123 LYS 123 233 233 LYS LYS A . n A 1 124 VAL 124 234 234 VAL VAL A . n A 1 125 ALA 125 235 235 ALA ALA A . n A 1 126 VAL 126 236 236 VAL VAL A . n A 1 127 GLY 127 237 237 GLY GLY A . n A 1 128 PRO 128 238 238 PRO PRO A . n A 1 129 ASN 129 239 239 ASN ASN A . n A 1 130 THR 130 240 240 THR THR A . n A 1 131 VAL 131 241 241 VAL VAL A . n A 1 132 MET 132 242 242 MET MET A . n A 1 133 SER 133 243 243 SER SER A . n A 1 134 PHE 134 244 244 PHE PHE A . n A 1 135 TYR 135 245 245 TYR TYR A . n A 1 136 ASN 136 246 246 ASN ASN A . n A 1 137 GLY 137 247 247 GLY GLY A . n A 1 138 VAL 138 248 248 VAL VAL A . n A 1 139 ARG 139 249 249 ARG ARG A . n A 1 140 ILE 140 250 250 ILE ILE A . n A 1 141 THR 141 251 251 THR THR A . n A 1 142 HIS 142 252 252 HIS HIS A . n A 1 143 GLN 143 253 253 GLN GLN A . n A 1 144 GLU 144 254 254 GLU GLU A . n A 1 145 VAL 145 255 255 VAL VAL A . n A 1 146 ASP 146 256 256 ASP ASP A . n A 1 147 SER 147 257 257 SER SER A . n A 1 148 ARG 148 258 258 ARG ARG A . n A 1 149 ASP 149 259 259 ASP ASP A . n A 1 150 TRP 150 260 260 TRP TRP A . n A 1 151 ALA 151 261 261 ALA ALA A . n A 1 152 LEU 152 262 262 LEU LEU A . n A 1 153 ASN 153 263 263 ASN ASN A . n A 1 154 GLY 154 264 264 GLY GLY A . n A 1 155 ASN 155 265 265 ASN ASN A . n A 1 156 THR 156 266 266 THR THR A . n A 1 157 LEU 157 267 267 LEU LEU A . n A 1 158 SER 158 268 268 SER SER A . n A 1 159 LEU 159 269 269 LEU LEU A . n A 1 160 ASP 160 270 270 ASP ASP A . n A 1 161 GLU 161 271 271 GLU GLU A . n A 1 162 GLU 162 272 272 GLU GLU A . n A 1 163 THR 163 273 273 THR THR A . n A 1 164 VAL 164 274 274 VAL VAL A . n A 1 165 ILE 165 275 275 ILE ILE A . n A 1 166 ASP 166 276 276 ASP ASP A . n A 1 167 VAL 167 277 277 VAL VAL A . n A 1 168 PRO 168 278 278 PRO PRO A . n A 1 169 GLU 169 279 279 GLU GLU A . n A 1 170 PRO 170 280 280 PRO PRO A . n A 1 171 TYR 171 281 281 TYR TYR A . n A 1 172 ASN 172 282 282 ASN ASN A . n A 1 173 HIS 173 283 283 HIS HIS A . n A 1 174 VAL 174 284 284 VAL VAL A . n A 1 175 SER 175 285 285 SER SER A . n A 1 176 LYS 176 286 286 LYS LYS A . n A 1 177 TYR 177 287 287 TYR TYR A . n A 1 178 CYS 178 288 288 CYS CYS A . n A 1 179 ALA 179 289 289 ALA ALA A . n A 1 180 SER 180 290 290 SER SER A . n A 1 181 LEU 181 291 291 LEU LEU A . n A 1 182 GLY 182 292 292 GLY GLY A . n A 1 183 HIS 183 293 293 HIS HIS A . n A 1 184 LYS 184 294 294 LYS LYS A . n A 1 185 ALA 185 295 295 ALA ALA A . n A 1 186 ASN 186 296 296 ASN ASN A . n A 1 187 HIS 187 297 297 HIS HIS A . n A 1 188 SER 188 298 298 SER SER A . n A 1 189 PHE 189 299 299 PHE PHE A . n A 1 190 THR 190 300 300 THR THR A . n A 1 191 PRO 191 301 301 PRO PRO A . n A 1 192 ASN 192 302 302 ASN ASN A . n A 1 193 CYS 193 303 303 CYS CYS A . n A 1 194 ILE 194 304 304 ILE ILE A . n A 1 195 TYR 195 305 305 TYR TYR A . n A 1 196 ASP 196 306 306 ASP ASP A . n A 1 197 MET 197 307 307 MET MET A . n A 1 198 PHE 198 308 308 PHE PHE A . n A 1 199 VAL 199 309 309 VAL VAL A . n A 1 200 HIS 200 310 310 HIS HIS A . n A 1 201 PRO 201 311 311 PRO PRO A . n A 1 202 ARG 202 312 312 ARG ARG A . n A 1 203 PHE 203 313 313 PHE PHE A . n A 1 204 GLY 204 314 314 GLY GLY A . n A 1 205 PRO 205 315 315 PRO PRO A . n A 1 206 ILE 206 316 316 ILE ILE A . n A 1 207 LYS 207 317 317 LYS LYS A . n A 1 208 CYS 208 318 318 CYS CYS A . n A 1 209 ILE 209 319 319 ILE ILE A . n A 1 210 ARG 210 320 320 ARG ARG A . n A 1 211 THR 211 321 321 THR THR A . n A 1 212 LEU 212 322 322 LEU LEU A . n A 1 213 ARG 213 323 323 ARG ARG A . n A 1 214 ALA 214 324 324 ALA ALA A . n A 1 215 VAL 215 325 325 VAL VAL A . n A 1 216 GLU 216 326 326 GLU GLU A . n A 1 217 ALA 217 327 327 ALA ALA A . n A 1 218 ASP 218 328 328 ASP ASP A . n A 1 219 GLU 219 329 329 GLU GLU A . n A 1 220 GLU 220 330 330 GLU GLU A . n A 1 221 LEU 221 331 331 LEU LEU A . n A 1 222 THR 222 332 332 THR THR A . n A 1 223 VAL 223 333 333 VAL VAL A . n A 1 224 ALA 224 334 334 ALA ALA A . n A 1 225 TYR 225 335 335 TYR TYR A . n A 1 226 GLY 226 336 336 GLY GLY A . n A 1 227 TYR 227 337 337 TYR TYR A . n A 1 228 ASP 228 338 338 ASP ASP A . n A 1 229 HIS 229 339 339 HIS HIS A . n A 1 230 SER 230 340 340 SER SER A . n A 1 231 PRO 231 341 341 PRO PRO A . n A 1 232 PRO 232 342 ? ? ? A . n A 1 233 GLY 233 343 ? ? ? A . n A 1 234 LYS 234 344 ? ? ? A . n A 1 235 SER 235 345 ? ? ? A . n A 1 236 GLY 236 346 ? ? ? A . n A 1 237 PRO 237 347 ? ? ? A . n A 1 238 GLU 238 348 348 GLU GLU A . n A 1 239 ALA 239 349 349 ALA ALA A . n A 1 240 PRO 240 350 350 PRO PRO A . n A 1 241 GLU 241 351 351 GLU GLU A . n A 1 242 TRP 242 352 352 TRP TRP A . n A 1 243 TYR 243 353 353 TYR TYR A . n A 1 244 GLN 244 354 354 GLN GLN A . n A 1 245 VAL 245 355 355 VAL VAL A . n A 1 246 GLU 246 356 356 GLU GLU A . n A 1 247 LEU 247 357 357 LEU LEU A . n A 1 248 LYS 248 358 358 LYS LYS A . n A 1 249 ALA 249 359 359 ALA ALA A . n A 1 250 PHE 250 360 360 PHE PHE A . n A 1 251 GLN 251 361 361 GLN GLN A . n A 1 252 ALA 252 362 362 ALA ALA A . n A 1 253 THR 253 363 363 THR THR A . n A 1 254 GLN 254 364 364 GLN ALA A . n A 1 255 GLN 255 365 ? ? ? A . n A 1 256 LYS 256 366 ? ? ? A . n B 2 1 ILE 1 298 298 ILE ILE B . n B 2 2 LYS 2 299 299 LYS LYS B . n B 2 3 ARG 3 300 300 ARG ARG B . n B 2 4 SER 4 301 301 SER SER B . n B 2 5 MLZ 5 302 302 MLZ MLZ B . n B 2 6 LYS 6 303 303 LYS LYS B . n B 2 7 ASN 7 304 304 ASN ASN B . n B 2 8 SER 8 305 ? ? ? B . n B 2 9 LEU 9 306 ? ? ? B . n B 2 10 ALA 10 307 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SAH 1 1 1 SAH SAH A . D 4 BME 1 395 395 BME BME A . E 4 BME 1 396 396 BME BME A . F 4 BME 1 397 397 BME BME A . G 5 HOH 1 398 1 HOH TIP A . G 5 HOH 2 399 2 HOH TIP A . G 5 HOH 3 400 3 HOH TIP A . G 5 HOH 4 401 4 HOH TIP A . G 5 HOH 5 402 5 HOH TIP A . G 5 HOH 6 403 6 HOH TIP A . G 5 HOH 7 404 7 HOH TIP A . G 5 HOH 8 405 8 HOH TIP A . G 5 HOH 9 406 9 HOH TIP A . G 5 HOH 10 407 10 HOH TIP A . G 5 HOH 11 408 11 HOH TIP A . G 5 HOH 12 409 12 HOH TIP A . G 5 HOH 13 410 13 HOH TIP A . G 5 HOH 14 411 14 HOH TIP A . G 5 HOH 15 412 15 HOH TIP A . G 5 HOH 16 413 16 HOH TIP A . G 5 HOH 17 414 17 HOH TIP A . G 5 HOH 18 415 18 HOH TIP A . G 5 HOH 19 416 19 HOH TIP A . G 5 HOH 20 417 20 HOH TIP A . G 5 HOH 21 418 21 HOH TIP A . G 5 HOH 22 419 22 HOH TIP A . G 5 HOH 23 420 23 HOH TIP A . G 5 HOH 24 421 24 HOH TIP A . G 5 HOH 25 422 25 HOH TIP A . G 5 HOH 26 423 26 HOH TIP A . G 5 HOH 27 424 27 HOH TIP A . G 5 HOH 28 425 28 HOH TIP A . G 5 HOH 29 426 29 HOH TIP A . G 5 HOH 30 427 30 HOH TIP A . G 5 HOH 31 428 31 HOH TIP A . G 5 HOH 32 429 32 HOH TIP A . G 5 HOH 33 430 33 HOH TIP A . G 5 HOH 34 431 34 HOH TIP A . G 5 HOH 35 432 35 HOH TIP A . G 5 HOH 36 433 36 HOH TIP A . G 5 HOH 37 434 37 HOH TIP A . G 5 HOH 38 435 38 HOH TIP A . G 5 HOH 39 436 39 HOH TIP A . G 5 HOH 40 437 40 HOH TIP A . G 5 HOH 41 438 41 HOH TIP A . G 5 HOH 42 439 42 HOH TIP A . G 5 HOH 43 440 43 HOH TIP A . G 5 HOH 44 441 44 HOH TIP A . G 5 HOH 45 442 45 HOH TIP A . G 5 HOH 46 443 46 HOH TIP A . G 5 HOH 47 444 47 HOH TIP A . G 5 HOH 48 445 48 HOH TIP A . G 5 HOH 49 446 49 HOH TIP A . G 5 HOH 50 447 50 HOH TIP A . G 5 HOH 51 448 51 HOH TIP A . G 5 HOH 52 449 52 HOH TIP A . G 5 HOH 53 450 54 HOH TIP A . G 5 HOH 54 451 57 HOH TIP A . G 5 HOH 55 452 58 HOH TIP A . G 5 HOH 56 453 59 HOH TIP A . G 5 HOH 57 454 60 HOH TIP A . G 5 HOH 58 455 61 HOH TIP A . G 5 HOH 59 456 62 HOH TIP A . G 5 HOH 60 457 63 HOH TIP A . G 5 HOH 61 458 64 HOH TIP A . G 5 HOH 62 459 65 HOH TIP A . G 5 HOH 63 460 66 HOH TIP A . G 5 HOH 64 461 67 HOH TIP A . G 5 HOH 65 462 68 HOH TIP A . G 5 HOH 66 463 69 HOH TIP A . G 5 HOH 67 464 70 HOH TIP A . G 5 HOH 68 465 71 HOH TIP A . G 5 HOH 69 466 72 HOH TIP A . G 5 HOH 70 467 73 HOH TIP A . G 5 HOH 71 468 74 HOH TIP A . G 5 HOH 72 469 76 HOH TIP A . G 5 HOH 73 470 77 HOH TIP A . G 5 HOH 74 471 78 HOH TIP A . G 5 HOH 75 472 79 HOH TIP A . G 5 HOH 76 473 80 HOH TIP A . G 5 HOH 77 474 81 HOH TIP A . G 5 HOH 78 475 82 HOH TIP A . G 5 HOH 79 476 83 HOH TIP A . G 5 HOH 80 477 84 HOH TIP A . G 5 HOH 81 478 85 HOH TIP A . G 5 HOH 82 479 86 HOH TIP A . G 5 HOH 83 480 87 HOH TIP A . G 5 HOH 84 481 88 HOH TIP A . G 5 HOH 85 482 89 HOH TIP A . G 5 HOH 86 483 90 HOH TIP A . G 5 HOH 87 484 91 HOH TIP A . G 5 HOH 88 485 92 HOH TIP A . G 5 HOH 89 486 93 HOH TIP A . G 5 HOH 90 487 94 HOH TIP A . G 5 HOH 91 488 95 HOH TIP A . G 5 HOH 92 489 96 HOH TIP A . G 5 HOH 93 490 97 HOH TIP A . G 5 HOH 94 491 99 HOH TIP A . G 5 HOH 95 492 100 HOH TIP A . G 5 HOH 96 493 101 HOH TIP A . G 5 HOH 97 494 102 HOH TIP A . G 5 HOH 98 495 103 HOH TIP A . G 5 HOH 99 496 104 HOH TIP A . G 5 HOH 100 497 105 HOH TIP A . G 5 HOH 101 498 106 HOH TIP A . G 5 HOH 102 499 107 HOH TIP A . G 5 HOH 103 500 108 HOH TIP A . G 5 HOH 104 501 109 HOH TIP A . G 5 HOH 105 502 110 HOH TIP A . G 5 HOH 106 503 111 HOH TIP A . G 5 HOH 107 504 112 HOH TIP A . G 5 HOH 108 505 113 HOH TIP A . G 5 HOH 109 506 114 HOH TIP A . G 5 HOH 110 507 115 HOH TIP A . G 5 HOH 111 508 116 HOH TIP A . G 5 HOH 112 509 117 HOH TIP A . G 5 HOH 113 510 118 HOH TIP A . G 5 HOH 114 511 119 HOH TIP A . G 5 HOH 115 512 120 HOH TIP A . G 5 HOH 116 513 121 HOH TIP A . G 5 HOH 117 514 123 HOH TIP A . G 5 HOH 118 515 124 HOH TIP A . G 5 HOH 119 516 125 HOH TIP A . G 5 HOH 120 517 126 HOH TIP A . G 5 HOH 121 518 127 HOH TIP A . G 5 HOH 122 519 128 HOH TIP A . G 5 HOH 123 520 129 HOH TIP A . G 5 HOH 124 521 130 HOH TIP A . G 5 HOH 125 522 132 HOH TIP A . G 5 HOH 126 523 133 HOH TIP A . G 5 HOH 127 524 134 HOH TIP A . G 5 HOH 128 525 135 HOH TIP A . G 5 HOH 129 526 136 HOH TIP A . G 5 HOH 130 527 137 HOH TIP A . G 5 HOH 131 528 138 HOH TIP A . G 5 HOH 132 529 139 HOH TIP A . G 5 HOH 133 530 140 HOH TIP A . G 5 HOH 134 531 141 HOH TIP A . G 5 HOH 135 532 143 HOH TIP A . G 5 HOH 136 533 144 HOH TIP A . G 5 HOH 137 534 146 HOH TIP A . G 5 HOH 138 535 147 HOH TIP A . G 5 HOH 139 536 148 HOH TIP A . G 5 HOH 140 537 149 HOH TIP A . G 5 HOH 141 538 150 HOH TIP A . G 5 HOH 142 539 151 HOH TIP A . G 5 HOH 143 540 152 HOH TIP A . G 5 HOH 144 541 153 HOH TIP A . G 5 HOH 145 542 154 HOH TIP A . G 5 HOH 146 543 155 HOH TIP A . G 5 HOH 147 544 156 HOH TIP A . G 5 HOH 148 545 157 HOH TIP A . G 5 HOH 149 546 158 HOH TIP A . G 5 HOH 150 547 159 HOH TIP A . G 5 HOH 151 548 160 HOH TIP A . G 5 HOH 152 549 161 HOH TIP A . G 5 HOH 153 550 162 HOH TIP A . G 5 HOH 154 551 163 HOH TIP A . H 5 HOH 1 75 75 HOH TIP B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id MLZ _pdbx_struct_mod_residue.label_seq_id 5 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id MLZ _pdbx_struct_mod_residue.auth_seq_id 302 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N-METHYL-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1990 ? 1 MORE -6.4 ? 1 'SSA (A^2)' 12320 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-06-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Source and taxonomy' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_name_com 2 3 'Structure model' entity_src_gen 3 3 'Structure model' pdbx_entity_src_syn 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_ref 6 3 'Structure model' struct_ref_seq # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity_name_com.name' 2 3 'Structure model' '_entity_src_gen.gene_src_common_name' 3 3 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 4 3 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 5 3 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 6 3 'Structure model' '_entity_src_gen.pdbx_seq_type' 7 3 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 8 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 9 3 'Structure model' '_pdbx_entity_src_syn.pdbx_beg_seq_num' 10 3 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AMoRE phasing . ? 2 CNS refinement . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CG2 A THR 363 ? ? N A GLN 364 ? ? 1.71 2 1 O A HOH 517 ? ? O A HOH 548 ? ? 2.11 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 THR _pdbx_validate_rmsd_angle.auth_seq_id_1 363 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 THR _pdbx_validate_rmsd_angle.auth_seq_id_2 363 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 THR _pdbx_validate_rmsd_angle.auth_seq_id_3 363 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 95.16 _pdbx_validate_rmsd_angle.angle_target_value 111.60 _pdbx_validate_rmsd_angle.angle_deviation -16.44 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 152 ? ? -143.12 -46.16 2 1 ASN A 188 ? ? -113.45 51.38 3 1 ASP A 194 ? ? -145.51 53.71 4 1 THR A 197 ? ? -124.01 -167.65 5 1 SER A 202 ? ? -172.83 149.43 6 1 ILE A 316 ? ? -144.31 -159.45 7 1 THR A 363 ? ? -127.97 -165.02 8 1 ARG B 300 ? ? -101.84 53.74 9 1 ARG B 300 ? ? -100.46 53.74 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 135 ? CG ? A GLU 25 CG 2 1 Y 1 A GLU 135 ? CD ? A GLU 25 CD 3 1 Y 1 A GLU 135 ? OE1 ? A GLU 25 OE1 4 1 Y 1 A GLU 135 ? OE2 ? A GLU 25 OE2 5 1 Y 1 A ASP 136 ? CG ? A ASP 26 CG 6 1 Y 1 A ASP 136 ? OD1 ? A ASP 26 OD1 7 1 Y 1 A ASP 136 ? OD2 ? A ASP 26 OD2 8 1 Y 1 A GLU 138 ? CG ? A GLU 28 CG 9 1 Y 1 A GLU 138 ? CD ? A GLU 28 CD 10 1 Y 1 A GLU 138 ? OE1 ? A GLU 28 OE1 11 1 Y 1 A GLU 138 ? OE2 ? A GLU 28 OE2 12 1 Y 1 A GLU 176 ? CG ? A GLU 66 CG 13 1 Y 1 A GLU 176 ? CD ? A GLU 66 CD 14 1 Y 1 A GLU 176 ? OE1 ? A GLU 66 OE1 15 1 Y 1 A GLU 176 ? OE2 ? A GLU 66 OE2 16 1 Y 1 A ASN 188 ? CG ? A ASN 78 CG 17 1 Y 1 A ASN 188 ? OD1 ? A ASN 78 OD1 18 1 Y 1 A ASN 188 ? ND2 ? A ASN 78 ND2 19 1 Y 1 A GLN 364 ? CG ? A GLN 254 CG 20 1 Y 1 A GLN 364 ? CD ? A GLN 254 CD 21 1 Y 1 A GLN 364 ? OE1 ? A GLN 254 OE1 22 1 Y 1 A GLN 364 ? NE2 ? A GLN 254 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 111 ? A LYS 1 2 1 Y 1 A ASP 112 ? A ASP 2 3 1 Y 1 A ASN 113 ? A ASN 3 4 1 Y 1 A ILE 114 ? A ILE 4 5 1 Y 1 A ARG 115 ? A ARG 5 6 1 Y 1 A PRO 342 ? A PRO 232 7 1 Y 1 A GLY 343 ? A GLY 233 8 1 Y 1 A LYS 344 ? A LYS 234 9 1 Y 1 A SER 345 ? A SER 235 10 1 Y 1 A GLY 346 ? A GLY 236 11 1 Y 1 A PRO 347 ? A PRO 237 12 1 Y 1 A GLN 365 ? A GLN 255 13 1 Y 1 A LYS 366 ? A LYS 256 14 1 Y 1 B SER 305 ? B SER 8 15 1 Y 1 B LEU 306 ? B LEU 9 16 1 Y 1 B ALA 307 ? B ALA 10 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 S-ADENOSYL-L-HOMOCYSTEINE SAH 4 BETA-MERCAPTOETHANOL BME 5 water HOH #