HEADER TRANSFERASE 05-MAR-08 3CGG TITLE CRYSTAL STRUCTURE OF TEHB-LIKE SAM-DEPENDENT METHYLTRANSFERASE TITLE 2 (NP_600671.1) FROM CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO AT TITLE 3 2.00 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SAM-DEPENDENT METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM ATCC 13032; SOURCE 3 ORGANISM_TAXID: 196627; SOURCE 4 STRAIN: DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025; SOURCE 5 GENE: NP_600671.1, CG1645; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NP_600671.1, TEHB-LIKE SAM-DEPENDENT METHYLTRANSFERASE, KEYWDS 2 METHYLTRANSFERASE DOMAIN, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 3CGG 1 REMARK SEQADV REVDAT 5 24-JUL-19 3CGG 1 REMARK LINK REVDAT 4 25-OCT-17 3CGG 1 REMARK REVDAT 3 13-JUL-11 3CGG 1 VERSN REVDAT 2 24-FEB-09 3CGG 1 VERSN REVDAT 1 18-MAR-08 3CGG 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF TEHB-LIKE SAM-DEPENDENT JRNL TITL 2 METHYLTRANSFERASE (NP_600671.1) FROM CORYNEBACTERIUM JRNL TITL 3 GLUTAMICUM ATCC 13032 KITASATO AT 2.00 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 28741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1455 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1962 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 130 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2820 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 274 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 28.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.23000 REMARK 3 B22 (A**2) : 0.58000 REMARK 3 B33 (A**2) : -0.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.164 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.250 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3086 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2113 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4183 ; 1.827 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5101 ; 0.987 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 398 ; 6.071 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 155 ;36.979 ;24.065 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 469 ;15.032 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;21.126 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 430 ; 0.167 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3621 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 672 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 607 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2278 ; 0.202 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1513 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1584 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 235 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.073 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 11 ; 0.203 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 83 ; 0.230 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.117 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1983 ; 1.872 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 804 ; 0.598 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3033 ; 2.793 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1284 ; 4.842 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1150 ; 6.516 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 31 A 194 4 REMARK 3 1 B 31 B 194 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2035 ; 0.550 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2035 ; 1.180 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 194 REMARK 3 ORIGIN FOR THE GROUP (A): 26.8987 46.6452 16.5100 REMARK 3 T TENSOR REMARK 3 T11: -0.0527 T22: -0.0822 REMARK 3 T33: -0.0866 T12: -0.0044 REMARK 3 T13: -0.0007 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.7548 L22: 1.0129 REMARK 3 L33: 1.2934 L12: 0.0606 REMARK 3 L13: 0.1531 L23: 0.3875 REMARK 3 S TENSOR REMARK 3 S11: 0.0111 S12: 0.0920 S13: -0.0432 REMARK 3 S21: 0.0077 S22: 0.0118 S23: -0.0528 REMARK 3 S31: 0.0881 S32: -0.0055 S33: -0.0229 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 11 B 194 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2262 51.3812 31.0345 REMARK 3 T TENSOR REMARK 3 T11: -0.0571 T22: -0.0276 REMARK 3 T33: -0.0594 T12: 0.0282 REMARK 3 T13: 0.0030 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 2.3259 L22: 0.5056 REMARK 3 L33: 1.3894 L12: -0.2936 REMARK 3 L13: -0.1204 L23: 0.1335 REMARK 3 S TENSOR REMARK 3 S11: 0.0321 S12: -0.0215 S13: 0.1462 REMARK 3 S21: 0.0039 S22: 0.0173 S23: 0.0724 REMARK 3 S31: -0.0215 S32: -0.1361 S33: -0.0494 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 4. 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID (NHE) AND CITRATE REMARK 3 (CIT) REMARK 3 FROM CRYSTALLIZATION AND ETHYLENE GLYCOL (EDO) FROM CRYO SOLUTION REMARK 3 WERE MODELED. REMARK 4 REMARK 4 3CGG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046746. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97978 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28773 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.062 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : 0.09300 REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.66700 REMARK 200 R SYM FOR SHELL (I) : 0.66700 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, AUTOSHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 1.0M SODIUM CITRATE, 0.1M REMARK 280 CHES PH 9.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.66500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.21450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.69900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.21450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.66500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.69900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE CRYSTAL PACKING ANALYSIS SUPPORTS REMARK 300 THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION REMARK 300 STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 TRP A 4 REMARK 465 LYS A 5 REMARK 465 GLU A 6 REMARK 465 LEU A 7 REMARK 465 THR A 8 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 THR B 3 REMARK 465 TRP B 4 REMARK 465 LYS B 5 REMARK 465 GLU B 6 REMARK 465 LEU B 7 REMARK 465 THR B 8 REMARK 465 ASP B 9 REMARK 465 ASN B 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 9 CG OD1 OD2 REMARK 470 LEU A 25 CD1 CD2 REMARK 470 ARG B 23 NH1 NH2 REMARK 470 LYS B 194 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 177 30.52 70.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHE A 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHE A 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 198 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 372498 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3CGG A 1 194 UNP Q6M5C6 Q6M5C6_CORGL 1 194 DBREF 3CGG B 1 194 UNP Q6M5C6 Q6M5C6_CORGL 1 194 SEQADV 3CGG GLY A 0 UNP Q6M5C6 EXPRESSION TAG SEQADV 3CGG GLY B 0 UNP Q6M5C6 EXPRESSION TAG SEQRES 1 A 195 GLY MSE THR THR TRP LYS GLU LEU THR ASP ASN ASN PRO SEQRES 2 A 195 ALA HIS SER GLU ASN TYR ALA GLN ARG TRP ARG ASN LEU SEQRES 3 A 195 ALA ALA ALA GLY ASN ASP ILE TYR GLY GLU ALA ARG LEU SEQRES 4 A 195 ILE ASP ALA MSE ALA PRO ARG GLY ALA LYS ILE LEU ASP SEQRES 5 A 195 ALA GLY CYS GLY GLN GLY ARG ILE GLY GLY TYR LEU SER SEQRES 6 A 195 LYS GLN GLY HIS ASP VAL LEU GLY THR ASP LEU ASP PRO SEQRES 7 A 195 ILE LEU ILE ASP TYR ALA LYS GLN ASP PHE PRO GLU ALA SEQRES 8 A 195 ARG TRP VAL VAL GLY ASP LEU SER VAL ASP GLN ILE SER SEQRES 9 A 195 GLU THR ASP PHE ASP LEU ILE VAL SER ALA GLY ASN VAL SEQRES 10 A 195 MSE GLY PHE LEU ALA GLU ASP GLY ARG GLU PRO ALA LEU SEQRES 11 A 195 ALA ASN ILE HIS ARG ALA LEU GLY ALA ASP GLY ARG ALA SEQRES 12 A 195 VAL ILE GLY PHE GLY ALA GLY ARG GLY TRP VAL PHE GLY SEQRES 13 A 195 ASP PHE LEU GLU VAL ALA GLU ARG VAL GLY LEU GLU LEU SEQRES 14 A 195 GLU ASN ALA PHE GLU SER TRP ASP LEU LYS PRO PHE VAL SEQRES 15 A 195 GLN GLY SER GLU PHE LEU VAL ALA VAL PHE THR LYS LYS SEQRES 1 B 195 GLY MSE THR THR TRP LYS GLU LEU THR ASP ASN ASN PRO SEQRES 2 B 195 ALA HIS SER GLU ASN TYR ALA GLN ARG TRP ARG ASN LEU SEQRES 3 B 195 ALA ALA ALA GLY ASN ASP ILE TYR GLY GLU ALA ARG LEU SEQRES 4 B 195 ILE ASP ALA MSE ALA PRO ARG GLY ALA LYS ILE LEU ASP SEQRES 5 B 195 ALA GLY CYS GLY GLN GLY ARG ILE GLY GLY TYR LEU SER SEQRES 6 B 195 LYS GLN GLY HIS ASP VAL LEU GLY THR ASP LEU ASP PRO SEQRES 7 B 195 ILE LEU ILE ASP TYR ALA LYS GLN ASP PHE PRO GLU ALA SEQRES 8 B 195 ARG TRP VAL VAL GLY ASP LEU SER VAL ASP GLN ILE SER SEQRES 9 B 195 GLU THR ASP PHE ASP LEU ILE VAL SER ALA GLY ASN VAL SEQRES 10 B 195 MSE GLY PHE LEU ALA GLU ASP GLY ARG GLU PRO ALA LEU SEQRES 11 B 195 ALA ASN ILE HIS ARG ALA LEU GLY ALA ASP GLY ARG ALA SEQRES 12 B 195 VAL ILE GLY PHE GLY ALA GLY ARG GLY TRP VAL PHE GLY SEQRES 13 B 195 ASP PHE LEU GLU VAL ALA GLU ARG VAL GLY LEU GLU LEU SEQRES 14 B 195 GLU ASN ALA PHE GLU SER TRP ASP LEU LYS PRO PHE VAL SEQRES 15 B 195 GLN GLY SER GLU PHE LEU VAL ALA VAL PHE THR LYS LYS MODRES 3CGG MSE A 42 MET SELENOMETHIONINE MODRES 3CGG MSE A 117 MET SELENOMETHIONINE MODRES 3CGG MSE B 42 MET SELENOMETHIONINE MODRES 3CGG MSE B 117 MET SELENOMETHIONINE HET MSE A 42 8 HET MSE A 117 8 HET MSE B 42 8 HET MSE B 117 8 HET NHE A 195 13 HET NHE A 196 13 HET EDO A 197 4 HET EDO A 198 4 HET EDO A 199 4 HET EDO A 200 4 HET EDO A 201 4 HET CIT B 195 13 HET EDO B 196 4 HET EDO B 197 4 HET EDO B 198 4 HETNAM MSE SELENOMETHIONINE HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CIT CITRIC ACID HETSYN NHE N-CYCLOHEXYLTAURINE; CHES HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 NHE 2(C8 H17 N O3 S) FORMUL 5 EDO 8(C2 H6 O2) FORMUL 10 CIT C6 H8 O7 FORMUL 14 HOH *274(H2 O) HELIX 1 1 ASN A 11 SER A 15 5 5 HELIX 2 2 ASN A 17 GLY A 29 1 13 HELIX 3 3 TYR A 33 ALA A 43 1 11 HELIX 4 4 GLY A 57 GLN A 66 1 10 HELIX 5 5 ASP A 76 PHE A 87 1 12 HELIX 6 6 VAL A 116 LEU A 120 5 5 HELIX 7 7 ALA A 121 ASP A 123 5 3 HELIX 8 8 GLY A 124 ALA A 135 1 12 HELIX 9 9 VAL A 153 GLY A 165 1 13 HELIX 10 10 PRO B 12 ALA B 28 1 17 HELIX 11 11 TYR B 33 ALA B 43 1 11 HELIX 12 12 GLY B 57 GLN B 66 1 10 HELIX 13 13 ASP B 76 PHE B 87 1 12 HELIX 14 14 ASN B 115 LEU B 120 1 6 HELIX 15 15 ALA B 121 ASP B 123 5 3 HELIX 16 16 GLY B 124 ALA B 135 1 12 HELIX 17 17 VAL B 153 GLY B 165 1 13 SHEET 1 A 7 ARG A 91 VAL A 94 0 SHEET 2 A 7 ASP A 69 ASP A 74 1 N GLY A 72 O ARG A 91 SHEET 3 A 7 LYS A 48 ALA A 52 1 N ILE A 49 O ASP A 69 SHEET 4 A 7 PHE A 107 SER A 112 1 O VAL A 111 N LEU A 50 SHEET 5 A 7 LEU A 136 GLY A 147 1 O VAL A 143 N ILE A 110 SHEET 6 A 7 PHE A 186 LYS A 193 -1 O PHE A 191 N ALA A 142 SHEET 7 A 7 LEU A 166 PHE A 172 -1 N GLU A 169 O VAL A 190 SHEET 1 B 7 ARG B 91 VAL B 94 0 SHEET 2 B 7 ASP B 69 ASP B 74 1 N GLY B 72 O VAL B 93 SHEET 3 B 7 LYS B 48 ALA B 52 1 N ASP B 51 O LEU B 71 SHEET 4 B 7 PHE B 107 SER B 112 1 O VAL B 111 N LEU B 50 SHEET 5 B 7 LEU B 136 GLY B 147 1 O GLY B 145 N SER B 112 SHEET 6 B 7 PHE B 186 LYS B 193 -1 O ALA B 189 N ILE B 144 SHEET 7 B 7 LEU B 166 PHE B 172 -1 N GLU B 169 O VAL B 190 LINK C ALA A 41 N MSE A 42 1555 1555 1.32 LINK C MSE A 42 N ALA A 43 1555 1555 1.33 LINK C VAL A 116 N MSE A 117 1555 1555 1.34 LINK C MSE A 117 N GLY A 118 1555 1555 1.33 LINK C ALA B 41 N MSE B 42 1555 1555 1.32 LINK C MSE B 42 N ALA B 43 1555 1555 1.33 LINK C VAL B 116 N MSE B 117 1555 1555 1.35 LINK C MSE B 117 N GLY B 118 1555 1555 1.34 CISPEP 1 ASN B 11 PRO B 12 0 12.76 SITE 1 AC1 8 GLY A 53 ASP A 74 LEU A 75 GLY A 95 SITE 2 AC1 8 ASP A 96 LEU A 97 SER A 112 ARG B 21 SITE 1 AC2 4 ALA A 19 TRP A 22 GLY A 155 LEU A 158 SITE 1 AC3 4 ASP A 9 TYR B 33 LYS B 65 ASP B 86 SITE 1 AC4 2 LEU A 120 ARG B 21 SITE 1 AC5 3 THR A 73 ASP A 100 GLN A 101 SITE 1 AC6 3 SER B 98 PRO B 127 ARG B 134 SITE 1 AC7 4 TYR A 62 GLN A 66 TYR B 62 GLN B 66 SITE 1 AC8 4 ILE A 102 SER A 103 GLU A 104 SER B 103 SITE 1 AC9 5 LYS A 178 ASP B 108 LEU B 109 ASP B 139 SITE 2 AC9 5 ARG B 141 SITE 1 BC1 4 TYR A 33 TYR A 62 LYS A 65 PHE A 87 SITE 1 BC2 5 SER A 103 GLN B 101 ILE B 102 SER B 103 SITE 2 BC2 5 GLU B 104 CRYST1 51.330 87.398 92.429 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019482 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011442 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010819 0.00000