HEADER TRANSCRIPTION REGULATOR 13-MAR-08 3CJN TITLE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR, MARR FAMILY, FROM TITLE 2 SILICIBACTER POMEROYI COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR, MARR FAMILY; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SILICIBACTER POMEROYI DSS-3; SOURCE 3 ORGANISM_TAXID: 246200; SOURCE 4 STRAIN: DSS-3 / DSM 15171; SOURCE 5 ATCC: 700808; SOURCE 6 GENE: SPO1458; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)STAR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS TRANSCRIPTIONAL REGULATOR, MARR FAMILY, SILICIBACTER POMEROYI, KEYWDS 2 STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST KEYWDS 3 CENTER FOR STRUCTURAL GENOMICS, MCSG, DNA-BINDING, TRANSCRIPTION KEYWDS 4 REGULATION, TRANSCRIPTION REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,L.VOLKART,L.FREEMAN,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-JUL-11 3CJN 1 VERSN REVDAT 2 24-FEB-09 3CJN 1 VERSN REVDAT 1 25-MAR-08 3CJN 0 JRNL AUTH C.CHANG,L.VOLKART,L.FREEMAN,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF MARR FAMILY TRANSCRIPTIONAL REGULATOR JRNL TITL 2 FROM SILICIBACTER POMEROYI. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 12819 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 624 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 864 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.1910 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1133 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 142 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 28.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.75000 REMARK 3 B22 (A**2) : -0.75000 REMARK 3 B33 (A**2) : 1.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.153 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.144 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.913 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1172 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1583 ; 1.282 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 148 ; 5.126 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 52 ;22.835 ;21.923 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 209 ;12.965 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;17.392 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 178 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 880 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 535 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 821 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 106 ; 0.132 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 64 ; 0.266 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.176 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 764 ; 0.857 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1169 ; 1.329 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 463 ; 2.006 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 414 ; 2.881 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 46 REMARK 3 ORIGIN FOR THE GROUP (A): 28.7941 20.8937 22.8327 REMARK 3 T TENSOR REMARK 3 T11: -0.0855 T22: -0.0766 REMARK 3 T33: -0.0743 T12: -0.0044 REMARK 3 T13: -0.0521 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 5.6368 L22: 1.9477 REMARK 3 L33: 11.1979 L12: -0.0487 REMARK 3 L13: -6.4319 L23: -0.9280 REMARK 3 S TENSOR REMARK 3 S11: -0.1328 S12: 0.0160 S13: 0.2256 REMARK 3 S21: 0.1154 S22: 0.1242 S23: 0.0041 REMARK 3 S31: -0.1113 S32: -0.2850 S33: 0.0086 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 47 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 6.2192 30.3322 30.0672 REMARK 3 T TENSOR REMARK 3 T11: -0.1113 T22: -0.0854 REMARK 3 T33: -0.0329 T12: -0.0056 REMARK 3 T13: -0.0357 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 5.1725 L22: 2.3664 REMARK 3 L33: 3.9984 L12: 1.2373 REMARK 3 L13: -2.3614 L23: 0.2687 REMARK 3 S TENSOR REMARK 3 S11: -0.0937 S12: 0.0654 S13: 0.0642 REMARK 3 S21: -0.1900 S22: 0.0665 S23: 0.0912 REMARK 3 S31: -0.1485 S32: -0.1511 S33: 0.0272 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 24.7760 28.5663 37.7967 REMARK 3 T TENSOR REMARK 3 T11: 0.0226 T22: 0.0206 REMARK 3 T33: 0.0054 T12: 0.0297 REMARK 3 T13: -0.0666 T23: -0.0281 REMARK 3 L TENSOR REMARK 3 L11: 17.3069 L22: 0.0608 REMARK 3 L33: 2.8986 L12: 0.9291 REMARK 3 L13: -4.9080 L23: -0.3920 REMARK 3 S TENSOR REMARK 3 S11: -0.2421 S12: -0.5449 S13: 0.7257 REMARK 3 S21: 0.0799 S22: 0.3126 S23: -0.0707 REMARK 3 S31: 0.2059 S32: 0.1366 S33: -0.0705 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 159 REMARK 3 ORIGIN FOR THE GROUP (A): 27.4731 37.8468 21.0356 REMARK 3 T TENSOR REMARK 3 T11: -0.0573 T22: -0.1655 REMARK 3 T33: 0.0164 T12: -0.0096 REMARK 3 T13: -0.0208 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 8.7764 L22: 2.0207 REMARK 3 L33: 4.6672 L12: -0.9485 REMARK 3 L13: 5.0470 L23: 0.1590 REMARK 3 S TENSOR REMARK 3 S11: 0.0549 S12: 0.2712 S13: 0.3255 REMARK 3 S21: -0.1319 S22: -0.0419 S23: -0.5277 REMARK 3 S31: 0.0336 S32: 0.2562 S33: -0.0130 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CJN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAR-08. REMARK 100 THE RCSB ID CODE IS RCSB046856. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12941 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.000 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 77.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.80 REMARK 200 R MERGE FOR SHELL (I) : 0.47200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 14.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 SUCCINIC ACID PH 7.0, 12 % PEG REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.59850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.98800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.98800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.39775 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.98800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.98800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 10.79925 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.98800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.98800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.39775 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.98800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.98800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 10.79925 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 21.59850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 43.19700 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 286 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 342 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 SER A 4 REMARK 465 THR A 5 REMARK 465 ASP A 6 REMARK 465 GLN A 7 REMARK 465 THR A 8 REMARK 465 GLU A 9 REMARK 465 GLN A 10 REMARK 465 LEU A 11 REMARK 465 SER A 99 REMARK 465 ASP A 100 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 12 CG CD NE CZ NH1 NH2 REMARK 470 THR A 43 OG1 CG2 REMARK 470 ASP A 101 CG OD1 OD2 REMARK 470 GLN A 102 CG CD OE1 NE2 REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 342 DISTANCE = 5.86 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC88806 RELATED DB: TARGETDB DBREF 3CJN A 1 159 UNP Q5LTF6 Q5LTF6_SILPO 1 159 SEQADV 3CJN SER A -2 UNP Q5LTF6 EXPRESSION TAG SEQADV 3CJN ASN A -1 UNP Q5LTF6 EXPRESSION TAG SEQADV 3CJN ALA A 0 UNP Q5LTF6 EXPRESSION TAG SEQRES 1 A 162 SER ASN ALA MSE ALA GLU SER THR ASP GLN THR GLU GLN SEQRES 2 A 162 LEU ARG GLU LEU ALA GLU ILE GLY LEU GLU GLY TYR ALA SEQRES 3 A 162 PRO TYR LEU MSE ASN ARG ILE MSE GLY ARG TYR ASN ALA SEQRES 4 A 162 ASN LEU ARG LYS GLU MSE THR ALA LEU GLY LEU SER THR SEQRES 5 A 162 ALA LYS MSE ARG ALA LEU ALA ILE LEU SER ALA LYS ASP SEQRES 6 A 162 GLY LEU PRO ILE GLY THR LEU GLY ILE PHE ALA VAL VAL SEQRES 7 A 162 GLU GLN SER THR LEU SER ARG ALA LEU ASP GLY LEU GLN SEQRES 8 A 162 ALA ASP GLY LEU VAL ARG ARG GLU VAL ASP SER ASP ASP SEQRES 9 A 162 GLN ARG SER SER ARG VAL TYR LEU THR PRO ALA GLY ARG SEQRES 10 A 162 ALA VAL TYR ASP ARG LEU TRP PRO HIS MSE ARG ALA SER SEQRES 11 A 162 HIS ASP ARG MSE PHE GLN GLY ILE THR PRO GLN GLU ARG SEQRES 12 A 162 GLN ALA PHE LEU ALA THR LEU ASN LYS MSE LEU ALA ASN SEQRES 13 A 162 ILE ARG VAL HIS GLU ILE MODRES 3CJN MSE A 27 MET SELENOMETHIONINE MODRES 3CJN MSE A 31 MET SELENOMETHIONINE MODRES 3CJN MSE A 42 MET SELENOMETHIONINE MODRES 3CJN MSE A 52 MET SELENOMETHIONINE MODRES 3CJN MSE A 124 MET SELENOMETHIONINE MODRES 3CJN MSE A 131 MET SELENOMETHIONINE MODRES 3CJN MSE A 150 MET SELENOMETHIONINE HET MSE A 27 8 HET MSE A 31 8 HET MSE A 42 8 HET MSE A 52 8 HET MSE A 124 8 HET MSE A 131 8 HET MSE A 150 8 HET PO4 A 201 5 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 PO4 O4 P 3- FORMUL 3 HOH *142(H2 O) HELIX 1 1 GLU A 13 GLY A 18 1 6 HELIX 2 2 LEU A 19 GLY A 21 5 3 HELIX 3 3 TYR A 22 LYS A 40 1 19 HELIX 4 4 GLU A 41 GLY A 46 1 6 HELIX 5 5 SER A 48 LYS A 61 1 14 HELIX 6 6 ILE A 66 VAL A 74 1 9 HELIX 7 7 GLU A 76 ASP A 90 1 15 HELIX 8 8 THR A 110 PHE A 132 1 23 HELIX 9 9 THR A 136 ARG A 155 1 20 SHEET 1 A 3 LEU A 64 PRO A 65 0 SHEET 2 A 3 SER A 105 LEU A 109 -1 O VAL A 107 N LEU A 64 SHEET 3 A 3 VAL A 93 VAL A 97 -1 N GLU A 96 O ARG A 106 LINK C LEU A 26 N MSE A 27 1555 1555 1.33 LINK C MSE A 27 N ASN A 28 1555 1555 1.34 LINK C ILE A 30 N MSE A 31 1555 1555 1.34 LINK C MSE A 31 N GLY A 32 1555 1555 1.33 LINK C GLU A 41 N MSE A 42 1555 1555 1.34 LINK C MSE A 42 N THR A 43 1555 1555 1.33 LINK C LYS A 51 N MSE A 52 1555 1555 1.33 LINK C MSE A 52 N ARG A 53 1555 1555 1.33 LINK C HIS A 123 N MSE A 124 1555 1555 1.33 LINK C MSE A 124 N ARG A 125 1555 1555 1.34 LINK C ARG A 130 N MSE A 131 1555 1555 1.34 LINK C MSE A 131 N PHE A 132 1555 1555 1.34 LINK C LYS A 149 N MSE A 150 1555 1555 1.32 LINK C MSE A 150 N LEU A 151 1555 1555 1.33 SITE 1 AC1 6 ARG A 29 ARG A 33 ARG A 155 HIS A 157 SITE 2 AC1 6 HOH A 211 HOH A 285 CRYST1 87.976 87.976 43.197 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011367 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011367 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023150 0.00000