HEADER UNKNOWN FUNCTION 16-MAR-08 3CKO TITLE CRYSTAL STRUCTURE OF A MYCOBACTERIAL PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM PARATUBERCULOSIS; SOURCE 3 STRAIN: K-10 KEYWDS MYCOBACTERIA, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Z.MARLAND,J.ROSSJOHN REVDAT 6 21-FEB-24 3CKO 1 REMARK REVDAT 5 13-JUL-11 3CKO 1 VERSN REVDAT 4 24-FEB-09 3CKO 1 VERSN REVDAT 3 18-NOV-08 3CKO 1 JRNL REVDAT 2 05-AUG-08 3CKO 1 REMARK REVDAT 1 29-JUL-08 3CKO 0 JRNL AUTH Z.FULTON,A.MCALISTER,M.C.WILCE,R.BRAMMANANTH, JRNL AUTH 2 L.ZAKER-TABRIZI,M.A.PERUGINI,S.P.BOTTOMLEY,R.L.COPPEL, JRNL AUTH 3 P.K.CRELLIN,J.ROSSJOHN,T.BEDDOE JRNL TITL CRYSTAL STRUCTURE OF A UDP-GLUCOSE-SPECIFIC JRNL TITL 2 GLYCOSYLTRANSFERASE FROM A MYCOBACTERIUM SPECIES. JRNL REF J.BIOL.CHEM. V. 283 27881 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18667419 JRNL DOI 10.1074/JBC.M801853200 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 13439 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 711 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 943 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.3450 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2250 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 24 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.428 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.246 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.195 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.483 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2382 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3273 ; 0.887 ; 2.005 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 316 ; 3.788 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;29.539 ;22.609 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 364 ;13.040 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;11.153 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 385 ; 0.051 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1807 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1063 ; 0.150 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1605 ; 0.295 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 105 ; 0.079 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 60 ; 0.129 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.131 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1554 ; 0.109 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2463 ; 0.198 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 926 ; 0.197 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 801 ; 0.349 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 45 REMARK 3 ORIGIN FOR THE GROUP (A): 24.8057 11.1862 29.7548 REMARK 3 T TENSOR REMARK 3 T11: 1.6005 T22: 0.6435 REMARK 3 T33: 0.4904 T12: 0.4498 REMARK 3 T13: 0.0622 T23: 0.2760 REMARK 3 L TENSOR REMARK 3 L11: 4.9824 L22: 3.6558 REMARK 3 L33: 1.7787 L12: -0.3364 REMARK 3 L13: 0.3090 L23: 2.5075 REMARK 3 S TENSOR REMARK 3 S11: -0.6440 S12: -0.9668 S13: -0.5029 REMARK 3 S21: 1.4692 S22: 0.8691 S23: -0.4467 REMARK 3 S31: 1.9828 S32: 1.1575 S33: -0.2251 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 46 A 78 REMARK 3 ORIGIN FOR THE GROUP (A): 6.9170 22.8112 28.4568 REMARK 3 T TENSOR REMARK 3 T11: 0.7725 T22: 0.3321 REMARK 3 T33: 0.4901 T12: -0.1002 REMARK 3 T13: 0.4118 T23: 0.0774 REMARK 3 L TENSOR REMARK 3 L11: 5.9402 L22: 5.1743 REMARK 3 L33: 6.4304 L12: -2.1493 REMARK 3 L13: 1.4075 L23: -0.0742 REMARK 3 S TENSOR REMARK 3 S11: -0.5901 S12: -0.6650 S13: -0.4084 REMARK 3 S21: 1.2882 S22: 0.1226 S23: 1.0455 REMARK 3 S31: 1.0679 S32: -0.6421 S33: 0.4675 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 79 A 117 REMARK 3 ORIGIN FOR THE GROUP (A): 2.6080 33.2881 22.8871 REMARK 3 T TENSOR REMARK 3 T11: 0.4074 T22: 0.3900 REMARK 3 T33: 0.5626 T12: -0.0576 REMARK 3 T13: 0.2251 T23: -0.0494 REMARK 3 L TENSOR REMARK 3 L11: 2.2221 L22: 4.7474 REMARK 3 L33: 4.5012 L12: -0.1568 REMARK 3 L13: -2.1530 L23: -0.1193 REMARK 3 S TENSOR REMARK 3 S11: -0.1987 S12: -0.3054 S13: -0.0724 REMARK 3 S21: 0.7723 S22: -0.0158 S23: 1.1769 REMARK 3 S31: 0.1455 S32: -1.1000 S33: 0.2146 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 118 A 173 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8128 22.2765 24.5502 REMARK 3 T TENSOR REMARK 3 T11: 0.7203 T22: 0.2524 REMARK 3 T33: 0.3133 T12: 0.0410 REMARK 3 T13: 0.1360 T23: 0.0607 REMARK 3 L TENSOR REMARK 3 L11: 3.2926 L22: 5.1761 REMARK 3 L33: 4.1489 L12: -1.2159 REMARK 3 L13: -0.9488 L23: 0.1503 REMARK 3 S TENSOR REMARK 3 S11: -0.3462 S12: -0.5844 S13: -0.4209 REMARK 3 S21: 0.9919 S22: 0.1991 S23: 0.4455 REMARK 3 S31: 1.0332 S32: 0.1074 S33: 0.1471 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 189 A 245 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0109 24.7896 13.7607 REMARK 3 T TENSOR REMARK 3 T11: 0.3680 T22: 0.1949 REMARK 3 T33: 0.3297 T12: 0.0285 REMARK 3 T13: -0.0571 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.0131 L22: 3.1068 REMARK 3 L33: 5.3499 L12: -0.9435 REMARK 3 L13: -1.6403 L23: 1.5643 REMARK 3 S TENSOR REMARK 3 S11: -0.1839 S12: -0.3268 S13: -0.0713 REMARK 3 S21: 0.6277 S22: 0.2077 S23: 0.1070 REMARK 3 S31: 0.5398 S32: 0.3592 S33: -0.0239 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 246 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): 28.1526 22.4251 21.5605 REMARK 3 T TENSOR REMARK 3 T11: 0.6252 T22: 0.3925 REMARK 3 T33: 0.2095 T12: 0.2182 REMARK 3 T13: -0.1482 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 8.8894 L22: 8.4869 REMARK 3 L33: 4.9149 L12: 3.3876 REMARK 3 L13: -4.2372 L23: -1.6122 REMARK 3 S TENSOR REMARK 3 S11: -0.2914 S12: -0.7060 S13: -0.0133 REMARK 3 S21: 1.2075 S22: 0.2700 S23: -0.4877 REMARK 3 S31: 0.9888 S32: 1.2994 S33: 0.0214 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 259 A 269 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1362 15.4587 11.1623 REMARK 3 T TENSOR REMARK 3 T11: 0.8502 T22: 0.6431 REMARK 3 T33: 0.8880 T12: -0.1150 REMARK 3 T13: 0.0692 T23: 0.0397 REMARK 3 L TENSOR REMARK 3 L11: 0.8083 L22: 0.0577 REMARK 3 L33: 5.5926 L12: 0.2160 REMARK 3 L13: -2.1261 L23: -0.5681 REMARK 3 S TENSOR REMARK 3 S11: -0.1929 S12: 0.2120 S13: -0.4606 REMARK 3 S21: 0.5269 S22: -0.2310 S23: 0.5408 REMARK 3 S31: 0.9608 S32: -0.3373 S33: 0.4239 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 270 A 278 REMARK 3 ORIGIN FOR THE GROUP (A): 14.3845 26.1080 3.0386 REMARK 3 T TENSOR REMARK 3 T11: 0.2481 T22: 0.2367 REMARK 3 T33: 0.4178 T12: -0.0267 REMARK 3 T13: -0.0065 T23: -0.0115 REMARK 3 L TENSOR REMARK 3 L11: 3.4000 L22: 9.4162 REMARK 3 L33: 5.6809 L12: -3.1275 REMARK 3 L13: 3.2248 L23: 1.1748 REMARK 3 S TENSOR REMARK 3 S11: 0.0617 S12: -0.5289 S13: -0.2603 REMARK 3 S21: 0.2897 S22: -0.2382 S23: 0.7226 REMARK 3 S31: 0.1633 S32: -0.7732 S33: 0.1764 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 279 A 317 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9322 29.2745 -3.8754 REMARK 3 T TENSOR REMARK 3 T11: 0.2317 T22: 0.2768 REMARK 3 T33: 0.4170 T12: 0.0409 REMARK 3 T13: -0.0651 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 4.6886 L22: 2.7970 REMARK 3 L33: 6.4940 L12: 0.0996 REMARK 3 L13: 1.5350 L23: 1.3378 REMARK 3 S TENSOR REMARK 3 S11: 0.1657 S12: 0.4575 S13: -0.2398 REMARK 3 S21: -0.1608 S22: -0.1290 S23: 0.3061 REMARK 3 S31: -0.1832 S32: -0.4443 S33: -0.0367 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 318 A 329 REMARK 3 ORIGIN FOR THE GROUP (A): 18.5467 41.8752 21.4916 REMARK 3 T TENSOR REMARK 3 T11: 0.5151 T22: 0.1676 REMARK 3 T33: 0.4419 T12: -0.0313 REMARK 3 T13: 0.0138 T23: -0.1145 REMARK 3 L TENSOR REMARK 3 L11: 8.6372 L22: 5.4573 REMARK 3 L33: 4.7708 L12: -1.3415 REMARK 3 L13: 3.5127 L23: 0.5575 REMARK 3 S TENSOR REMARK 3 S11: -0.1635 S12: -1.0575 S13: 0.4642 REMARK 3 S21: 0.7205 S22: 0.1589 S23: -0.0193 REMARK 3 S31: -0.4866 S32: 0.0456 S33: 0.0046 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CKO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046892. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13439 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 33.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.51500 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RIGID BODY REFINEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M AMMONIUM SULPHATE, 0.1 M SODIUM REMARK 280 CITRATE PH 5.5, 20 MM MANGANESE CHLORIDE, 1 MM SODIUM REMARK 280 THIOSULPHATE, 100 MM URIDINE-5 -DIPHOSPHATE-GLUCOSE , VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.91450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.41150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.41150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.95725 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.41150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.41150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 77.87175 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.41150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.41150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.95725 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.41150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.41150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.87175 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.91450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ASP A 5 REMARK 465 LEU A 6 REMARK 465 VAL A 7 REMARK 465 ALA A 8 REMARK 465 GLY A 9 REMARK 465 GLU A 10 REMARK 465 LEU A 11 REMARK 465 ALA A 12 REMARK 465 GLY A 13 REMARK 465 ASP A 14 REMARK 465 LEU A 174 REMARK 465 ASN A 175 REMARK 465 VAL A 176 REMARK 465 GLY A 177 REMARK 465 ASP A 178 REMARK 465 ALA A 179 REMARK 465 GLY A 180 REMARK 465 GLY A 181 REMARK 465 GLY A 182 REMARK 465 ALA A 183 REMARK 465 GLY A 184 REMARK 465 ALA A 185 REMARK 465 THR A 186 REMARK 465 GLY A 187 REMARK 465 GLY A 188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 29 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 172 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 223 CG CD OE1 OE2 REMARK 470 GLN A 306 CG CD OE1 NE2 REMARK 470 ARG A 329 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 21 109.38 -56.49 REMARK 500 ASP A 28 26.68 -79.87 REMARK 500 ASP A 75 -9.14 74.68 REMARK 500 SER A 86 40.23 -94.71 REMARK 500 SER A 86 40.65 -95.10 REMARK 500 ASP A 91 36.85 -86.78 REMARK 500 LEU A 110 80.50 -152.80 REMARK 500 ASN A 144 70.07 50.44 REMARK 500 ASP A 161 18.79 -145.09 REMARK 500 ILE A 326 -62.56 -109.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 UDP A 331 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 330 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 333 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CKJ RELATED DB: PDB REMARK 900 RELATED ID: 3CKN RELATED DB: PDB REMARK 900 RELATED ID: 3CKQ RELATED DB: PDB REMARK 900 RELATED ID: 3CKV RELATED DB: PDB DBREF 3CKO A 1 329 UNP Q73WU1 Q73WU1_MYCPA 1 329 SEQRES 1 A 329 MET THR THR SER ASP LEU VAL ALA GLY GLU LEU ALA GLY SEQRES 2 A 329 ASP GLY LEU ARG ASP THR ARG PRO GLY ASP THR TRP LEU SEQRES 3 A 329 ALA ASP ARG SER TRP ASN ARG PRO GLY TRP THR VAL ALA SEQRES 4 A 329 GLU LEU GLU ALA ALA LYS ALA GLY ARG THR ILE SER VAL SEQRES 5 A 329 VAL LEU PRO ALA LEU ASP GLU GLU ASP THR ILE GLY SER SEQRES 6 A 329 VAL ILE ASP SER ILE SER PRO LEU VAL ASP GLY LEU VAL SEQRES 7 A 329 ASP GLU LEU ILE VAL LEU ASP SER GLY SER THR ASP ASP SEQRES 8 A 329 THR GLU ILE ARG ALA VAL ALA ALA GLY ALA ARG VAL VAL SEQRES 9 A 329 SER ARG GLU GLN ALA LEU PRO GLU VAL PRO ILE ARG PRO SEQRES 10 A 329 GLY LYS GLY GLU ALA LEU TRP ARG SER LEU ALA ALA SER SEQRES 11 A 329 ARG GLY ASP ILE VAL VAL PHE VAL ASP SER ASP LEU ILE SEQRES 12 A 329 ASN PRO HIS PRO MET PHE VAL PRO TRP LEU VAL GLY PRO SEQRES 13 A 329 LEU LEU THR GLY ASP GLY VAL HIS LEU VAL LYS SER PHE SEQRES 14 A 329 TYR ARG ARG PRO LEU ASN VAL GLY ASP ALA GLY GLY GLY SEQRES 15 A 329 ALA GLY ALA THR GLY GLY GLY ARG VAL THR GLU LEU VAL SEQRES 16 A 329 ALA ARG PRO LEU LEU ALA ALA LEU ARG PRO GLU LEU GLY SEQRES 17 A 329 CYS ILE LEU GLN PRO LEU GLY GLY GLU TYR ALA ALA THR SEQRES 18 A 329 ARG GLU LEU LEU THR SER VAL PRO PHE ALA PRO GLY TYR SEQRES 19 A 329 GLY VAL GLU ILE GLY LEU LEU VAL ASP THR PHE ASP ARG SEQRES 20 A 329 LEU GLY LEU ASP ALA ILE ALA GLN VAL ASN LEU GLY VAL SEQRES 21 A 329 ARG GLU HIS ARG ASN ARG PRO LEU ALA GLU LEU GLY ALA SEQRES 22 A 329 MET SER ARG GLN VAL ILE ALA THR LEU LEU SER ARG CYS SEQRES 23 A 329 GLY ILE PRO ASP SER GLY VAL GLY LEU THR GLN PHE VAL SEQRES 24 A 329 ALA ASP GLY PRO GLU GLY GLN SER TYR THR GLN HIS THR SEQRES 25 A 329 TRP PRO VAL SER LEU ALA ASP ARG PRO PRO MET GLN ALA SEQRES 26 A 329 ILE ARG PRO ARG HET SO4 A 330 5 HET UDP A 331 21 HET GOL A 332 6 HET GOL A 333 6 HETNAM SO4 SULFATE ION HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 O4 S 2- FORMUL 3 UDP C9 H14 N2 O12 P2 FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *24(H2 O) HELIX 1 1 THR A 37 ALA A 44 1 8 HELIX 2 2 THR A 62 SER A 71 1 10 HELIX 3 3 PRO A 72 VAL A 74 5 3 HELIX 4 4 ASP A 91 GLY A 100 1 10 HELIX 5 5 ARG A 106 LEU A 110 1 5 HELIX 6 6 GLY A 118 SER A 130 1 13 HELIX 7 7 MET A 148 THR A 159 1 12 HELIX 8 8 GLY A 189 VAL A 195 1 7 HELIX 9 9 VAL A 195 ARG A 204 1 10 HELIX 10 10 PRO A 205 GLY A 208 5 4 HELIX 11 11 ARG A 222 THR A 226 1 5 HELIX 12 12 PRO A 232 TYR A 234 5 3 HELIX 13 13 GLY A 235 GLY A 249 1 15 HELIX 14 14 GLU A 270 CYS A 286 1 17 HELIX 15 15 PRO A 322 ILE A 326 5 5 SHEET 1 A 9 TRP A 31 ASN A 32 0 SHEET 2 A 9 THR A 24 TRP A 25 -1 N THR A 24 O ASN A 32 SHEET 3 A 9 ILE A 253 VAL A 260 -1 O GLN A 255 N TRP A 25 SHEET 4 A 9 LEU A 165 ARG A 171 1 N LYS A 167 O ALA A 254 SHEET 5 A 9 TYR A 218 THR A 221 -1 O ALA A 219 N VAL A 166 SHEET 6 A 9 ILE A 134 PHE A 137 -1 N PHE A 137 O TYR A 218 SHEET 7 A 9 ILE A 50 ALA A 56 1 N VAL A 53 O VAL A 136 SHEET 8 A 9 GLU A 80 ASP A 85 1 O ILE A 82 N VAL A 52 SHEET 9 A 9 ARG A 102 SER A 105 1 O VAL A 104 N VAL A 83 SHEET 1 B 2 THR A 296 ALA A 300 0 SHEET 2 B 2 TYR A 308 THR A 312 -1 O HIS A 311 N GLN A 297 SITE 1 AC1 7 ARG A 17 PRO A 114 ARG A 116 TYR A 308 SITE 2 AC1 7 THR A 309 GLN A 310 ARG A 320 SITE 1 AC2 12 PRO A 55 ALA A 56 LEU A 57 GLU A 59 SITE 2 AC2 12 SER A 86 GLY A 118 LYS A 119 ASP A 139 SITE 3 AC2 12 SER A 140 ASP A 141 TYR A 234 ARG A 266 SITE 1 AC3 2 GLY A 189 ARG A 190 SITE 1 AC4 4 GLY A 189 THR A 192 ARG A 266 LEU A 271 CRYST1 86.823 86.823 103.829 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011518 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011518 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009631 0.00000