data_3CM3 # _entry.id 3CM3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CM3 pdb_00003cm3 10.2210/pdb3cm3/pdb RCSB RCSB046940 ? ? WWPDB D_1000046940 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2RF6 'Vaccinia Virus Dual-Specificity Phosphatase VH1' unspecified PDB 3CEO 'Vaccinia Virus Dual-Specificity Phosphatase VH1 Bound to Xenon Gas' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3CM3 _pdbx_database_status.recvd_initial_deposition_date 2008-03-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Koksal, A.C.' 1 'Cingolani, G.' 2 # _citation.id primary _citation.title 'Dimeric Quaternary Structure of the Prototypical Dual Specificity Phosphatase VH1.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 284 _citation.page_first 10129 _citation.page_last 10137 _citation.year 2009 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19211553 _citation.pdbx_database_id_DOI 10.1074/jbc.M808362200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Koksal, A.C.' 1 ? primary 'Nardozzi, J.D.' 2 ? primary 'Cingolani, G.' 3 ? # _cell.entry_id 3CM3 _cell.length_a 63.816 _cell.length_b 38.690 _cell.length_c 134.987 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CM3 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dual specificity protein phosphatase' 20262.455 1 '3.1.3.48, 3.1.3.-' C110S ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 non-polymer syn BETA-MERCAPTOETHANOL 78.133 2 ? ? ? ? 4 water nat water 18.015 300 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Late protein H1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPEIRMDKKSLYKYLLLRSTGDMHKAKSPTIMTRVTNNVYLGNYKNAMDAPSSEVKFKYVLNLTMDKYTLPNSNINIIHI PLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVEN PSFKRQIIEKYVIDKN ; _entity_poly.pdbx_seq_one_letter_code_can ;GPEIRMDKKSLYKYLLLRSTGDMHKAKSPTIMTRVTNNVYLGNYKNAMDAPSSEVKFKYVLNLTMDKYTLPNSNINIIHI PLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVEN PSFKRQIIEKYVIDKN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLU n 1 4 ILE n 1 5 ARG n 1 6 MET n 1 7 ASP n 1 8 LYS n 1 9 LYS n 1 10 SER n 1 11 LEU n 1 12 TYR n 1 13 LYS n 1 14 TYR n 1 15 LEU n 1 16 LEU n 1 17 LEU n 1 18 ARG n 1 19 SER n 1 20 THR n 1 21 GLY n 1 22 ASP n 1 23 MET n 1 24 HIS n 1 25 LYS n 1 26 ALA n 1 27 LYS n 1 28 SER n 1 29 PRO n 1 30 THR n 1 31 ILE n 1 32 MET n 1 33 THR n 1 34 ARG n 1 35 VAL n 1 36 THR n 1 37 ASN n 1 38 ASN n 1 39 VAL n 1 40 TYR n 1 41 LEU n 1 42 GLY n 1 43 ASN n 1 44 TYR n 1 45 LYS n 1 46 ASN n 1 47 ALA n 1 48 MET n 1 49 ASP n 1 50 ALA n 1 51 PRO n 1 52 SER n 1 53 SER n 1 54 GLU n 1 55 VAL n 1 56 LYS n 1 57 PHE n 1 58 LYS n 1 59 TYR n 1 60 VAL n 1 61 LEU n 1 62 ASN n 1 63 LEU n 1 64 THR n 1 65 MET n 1 66 ASP n 1 67 LYS n 1 68 TYR n 1 69 THR n 1 70 LEU n 1 71 PRO n 1 72 ASN n 1 73 SER n 1 74 ASN n 1 75 ILE n 1 76 ASN n 1 77 ILE n 1 78 ILE n 1 79 HIS n 1 80 ILE n 1 81 PRO n 1 82 LEU n 1 83 VAL n 1 84 ASP n 1 85 ASP n 1 86 THR n 1 87 THR n 1 88 THR n 1 89 ASP n 1 90 ILE n 1 91 SER n 1 92 LYS n 1 93 TYR n 1 94 PHE n 1 95 ASP n 1 96 ASP n 1 97 VAL n 1 98 THR n 1 99 ALA n 1 100 PHE n 1 101 LEU n 1 102 SER n 1 103 LYS n 1 104 CYS n 1 105 ASP n 1 106 GLN n 1 107 ARG n 1 108 ASN n 1 109 GLU n 1 110 PRO n 1 111 VAL n 1 112 LEU n 1 113 VAL n 1 114 HIS n 1 115 SER n 1 116 ALA n 1 117 ALA n 1 118 GLY n 1 119 VAL n 1 120 ASN n 1 121 ARG n 1 122 SER n 1 123 GLY n 1 124 ALA n 1 125 MET n 1 126 ILE n 1 127 LEU n 1 128 ALA n 1 129 TYR n 1 130 LEU n 1 131 MET n 1 132 SER n 1 133 LYS n 1 134 ASN n 1 135 LYS n 1 136 GLU n 1 137 SER n 1 138 LEU n 1 139 PRO n 1 140 MET n 1 141 LEU n 1 142 TYR n 1 143 PHE n 1 144 LEU n 1 145 TYR n 1 146 VAL n 1 147 TYR n 1 148 HIS n 1 149 SER n 1 150 MET n 1 151 ARG n 1 152 ASP n 1 153 LEU n 1 154 ARG n 1 155 GLY n 1 156 ALA n 1 157 PHE n 1 158 VAL n 1 159 GLU n 1 160 ASN n 1 161 PRO n 1 162 SER n 1 163 PHE n 1 164 LYS n 1 165 ARG n 1 166 GLN n 1 167 ILE n 1 168 ILE n 1 169 GLU n 1 170 LYS n 1 171 TYR n 1 172 VAL n 1 173 ILE n 1 174 ASP n 1 175 LYS n 1 176 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'H1 ORF' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Western Reserve / WR' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vaccinia virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET14B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DUSP_VACCV _struct_ref.pdbx_db_accession P07239 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDKKSLYKYLLLRSTGDMHKAKSPTIMTRVTNNVYLGNYKNAMDAPSSEVKFKYVLNLTMDKYTLPNSNINIIHIPLVDD TTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKR QIIEKYVIDKN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3CM3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 176 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P07239 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 171 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1003 _struct_ref_seq.pdbx_auth_seq_align_end 1173 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CM3 GLY A 1 ? UNP P07239 ? ? 'expression tag' 998 1 1 3CM3 PRO A 2 ? UNP P07239 ? ? 'expression tag' 999 2 1 3CM3 GLU A 3 ? UNP P07239 ? ? 'expression tag' 1000 3 1 3CM3 ILE A 4 ? UNP P07239 ? ? 'expression tag' 1001 4 1 3CM3 ARG A 5 ? UNP P07239 ? ? 'expression tag' 1002 5 1 3CM3 SER A 115 ? UNP P07239 CYS 110 'engineered mutation' 1112 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3CM3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_percent_sol 40.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method Batch _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details '62% PEG 400, 0.1M Tris pH 8 , Batch, temperature 297K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC Q-270' _diffrn_detector.pdbx_collection_date 2007-10-20 _diffrn_detector.details 'Horizontal bent Si(111), asymmetrically cut with water cooled Cu Block. Rh-coated Si mirror for vertical focusing.' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE F1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline F1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.918 # _reflns.entry_id 3CM3 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.32 _reflns.d_resolution_low 20 _reflns.number_all 39499 _reflns.number_obs 35905 _reflns.percent_possible_obs 90.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.057 _reflns.pdbx_netI_over_sigmaI 65.6 _reflns.B_iso_Wilson_estimate 19.326 _reflns.pdbx_redundancy 15.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.32 _reflns_shell.d_res_low 1.37 _reflns_shell.percent_possible_all 51.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.357 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3868 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CM3 _refine.ls_number_reflns_obs 33998 _refine.ls_number_reflns_all 37455 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 14.11 _refine.ls_d_res_high 1.32 _refine.ls_percent_reflns_obs 90.77 _refine.ls_R_factor_obs 0.1717 _refine.ls_R_factor_all 0.1717 _refine.ls_R_factor_R_work 0.17098 _refine.ls_R_factor_R_free 0.18458 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.963 _refine.B_iso_mean 26.352 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB Entry 2RF6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Anisotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.071 _refine.pdbx_overall_ESU_R_Free 0.057 _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1366 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 300 _refine_hist.number_atoms_total 1679 _refine_hist.d_res_high 1.32 _refine_hist.d_res_low 14.11 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 1411 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.186 1.976 ? 1916 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.494 5.000 ? 176 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.513 23.934 ? 61 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.109 15.000 ? 254 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.492 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.076 0.200 ? 216 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1049 'X-RAY DIFFRACTION' ? r_nbd_refined 0.257 0.200 ? 724 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.320 0.200 ? 978 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.242 0.200 ? 215 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.207 0.200 ? 62 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.229 0.200 ? 40 'X-RAY DIFFRACTION' ? r_mcbond_it 2.158 1.500 ? 853 'X-RAY DIFFRACTION' ? r_mcangle_it 3.819 2.000 ? 1398 'X-RAY DIFFRACTION' ? r_scbond_it 3.739 3.000 ? 558 'X-RAY DIFFRACTION' ? r_scangle_it 6.064 4.500 ? 515 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.32 _refine_ls_shell.d_res_low 1.357 _refine_ls_shell.number_reflns_R_work 1248 _refine_ls_shell.R_factor_R_work 0.362 _refine_ls_shell.percent_reflns_obs 46.10 _refine_ls_shell.R_factor_R_free 0.384 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1250 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3CM3 _struct.title 'High Resolution Crystal Structure of the Vaccinia Virus Dual-Specificity Phosphatase VH1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CM3 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Dual-specificity phosphatase, Vaccinia virus, VH1, Hydrolase, Late Protein, Protein phosphatase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details 'One copy of the biologically relevant monomer is present in the asymmetric unit' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 10 ? THR A 20 ? SER A 1007 THR A 1017 1 ? 11 HELX_P HELX_P2 2 ASN A 43 ? ASP A 49 ? ASN A 1040 ASP A 1046 1 ? 7 HELX_P HELX_P3 3 ALA A 50 ? SER A 53 ? ALA A 1047 SER A 1050 5 ? 4 HELX_P HELX_P4 4 ILE A 90 ? LYS A 92 ? ILE A 1087 LYS A 1089 5 ? 3 HELX_P HELX_P5 5 TYR A 93 ? ASN A 108 ? TYR A 1090 ASN A 1105 1 ? 16 HELX_P HELX_P6 6 ASN A 120 ? ASN A 134 ? ASN A 1117 ASN A 1131 1 ? 15 HELX_P HELX_P7 7 LEU A 138 ? GLY A 155 ? LEU A 1135 GLY A 1152 1 ? 18 HELX_P HELX_P8 8 ASN A 160 ? VAL A 172 ? ASN A 1157 VAL A 1169 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 33 ? ARG A 34 ? THR A 1030 ARG A 1031 A 2 VAL A 39 ? GLY A 42 ? VAL A 1036 GLY A 1039 A 3 VAL A 111 ? HIS A 114 ? VAL A 1108 HIS A 1111 A 4 TYR A 59 ? ASN A 62 ? TYR A 1056 ASN A 1059 A 5 ASN A 76 ? HIS A 79 ? ASN A 1073 HIS A 1076 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 33 ? N THR A 1030 O LEU A 41 ? O LEU A 1038 A 2 3 N TYR A 40 ? N TYR A 1037 O VAL A 113 ? O VAL A 1110 A 3 4 O LEU A 112 ? O LEU A 1109 N LEU A 61 ? N LEU A 1058 A 4 5 N VAL A 60 ? N VAL A 1057 O ILE A 78 ? O ILE A 1075 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 1 ? 8 'BINDING SITE FOR RESIDUE PO4 A 1' AC2 Software A BME 1174 ? 5 'BINDING SITE FOR RESIDUE BME A 1174' AC3 Software A BME 2 ? 3 'BINDING SITE FOR RESIDUE BME A 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ASP A 84 ? ASP A 1081 . ? 1_555 ? 2 AC1 8 SER A 115 ? SER A 1112 . ? 1_555 ? 3 AC1 8 ALA A 116 ? ALA A 1113 . ? 1_555 ? 4 AC1 8 ALA A 117 ? ALA A 1114 . ? 1_555 ? 5 AC1 8 GLY A 118 ? GLY A 1115 . ? 1_555 ? 6 AC1 8 ASN A 120 ? ASN A 1117 . ? 1_555 ? 7 AC1 8 ARG A 121 ? ARG A 1118 . ? 1_555 ? 8 AC1 8 HOH E . ? HOH A 1199 . ? 1_555 ? 9 AC2 5 ASN A 120 ? ASN A 1117 . ? 1_555 ? 10 AC2 5 GLU A 159 ? GLU A 1156 . ? 1_555 ? 11 AC2 5 ASN A 160 ? ASN A 1157 . ? 1_555 ? 12 AC2 5 HOH E . ? HOH A 1251 . ? 1_555 ? 13 AC2 5 HOH E . ? HOH A 1391 . ? 1_555 ? 14 AC3 3 ASN A 134 ? ASN A 1131 . ? 1_555 ? 15 AC3 3 LYS A 135 ? LYS A 1132 . ? 1_555 ? 16 AC3 3 SER A 137 ? SER A 1134 . ? 1_555 ? # _database_PDB_matrix.entry_id 3CM3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3CM3 _atom_sites.fract_transf_matrix[1][1] 0.015670 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025846 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007408 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 998 ? ? ? A . n A 1 2 PRO 2 999 ? ? ? A . n A 1 3 GLU 3 1000 ? ? ? A . n A 1 4 ILE 4 1001 ? ? ? A . n A 1 5 ARG 5 1002 ? ? ? A . n A 1 6 MET 6 1003 ? ? ? A . n A 1 7 ASP 7 1004 ? ? ? A . n A 1 8 LYS 8 1005 ? ? ? A . n A 1 9 LYS 9 1006 ? ? ? A . n A 1 10 SER 10 1007 1007 SER SER A . n A 1 11 LEU 11 1008 1008 LEU LEU A . n A 1 12 TYR 12 1009 1009 TYR TYR A . n A 1 13 LYS 13 1010 1010 LYS LYS A . n A 1 14 TYR 14 1011 1011 TYR TYR A . n A 1 15 LEU 15 1012 1012 LEU LEU A . n A 1 16 LEU 16 1013 1013 LEU LEU A . n A 1 17 LEU 17 1014 1014 LEU LEU A . n A 1 18 ARG 18 1015 1015 ARG ARG A . n A 1 19 SER 19 1016 1016 SER SER A . n A 1 20 THR 20 1017 1017 THR THR A . n A 1 21 GLY 21 1018 1018 GLY GLY A . n A 1 22 ASP 22 1019 1019 ASP ASP A . n A 1 23 MET 23 1020 1020 MET MET A . n A 1 24 HIS 24 1021 1021 HIS HIS A . n A 1 25 LYS 25 1022 1022 LYS LYS A . n A 1 26 ALA 26 1023 1023 ALA ALA A . n A 1 27 LYS 27 1024 1024 LYS LYS A . n A 1 28 SER 28 1025 1025 SER SER A . n A 1 29 PRO 29 1026 1026 PRO PRO A . n A 1 30 THR 30 1027 1027 THR THR A . n A 1 31 ILE 31 1028 1028 ILE ILE A . n A 1 32 MET 32 1029 1029 MET MET A . n A 1 33 THR 33 1030 1030 THR THR A . n A 1 34 ARG 34 1031 1031 ARG ARG A . n A 1 35 VAL 35 1032 1032 VAL VAL A . n A 1 36 THR 36 1033 1033 THR THR A . n A 1 37 ASN 37 1034 1034 ASN ASN A . n A 1 38 ASN 38 1035 1035 ASN ASN A . n A 1 39 VAL 39 1036 1036 VAL VAL A . n A 1 40 TYR 40 1037 1037 TYR TYR A . n A 1 41 LEU 41 1038 1038 LEU LEU A . n A 1 42 GLY 42 1039 1039 GLY GLY A . n A 1 43 ASN 43 1040 1040 ASN ASN A . n A 1 44 TYR 44 1041 1041 TYR TYR A . n A 1 45 LYS 45 1042 1042 LYS LYS A . n A 1 46 ASN 46 1043 1043 ASN ASN A . n A 1 47 ALA 47 1044 1044 ALA ALA A . n A 1 48 MET 48 1045 1045 MET MET A . n A 1 49 ASP 49 1046 1046 ASP ASP A . n A 1 50 ALA 50 1047 1047 ALA ALA A . n A 1 51 PRO 51 1048 1048 PRO PRO A . n A 1 52 SER 52 1049 1049 SER SER A . n A 1 53 SER 53 1050 1050 SER SER A . n A 1 54 GLU 54 1051 1051 GLU GLU A . n A 1 55 VAL 55 1052 1052 VAL VAL A . n A 1 56 LYS 56 1053 1053 LYS LYS A . n A 1 57 PHE 57 1054 1054 PHE PHE A . n A 1 58 LYS 58 1055 1055 LYS LYS A . n A 1 59 TYR 59 1056 1056 TYR TYR A . n A 1 60 VAL 60 1057 1057 VAL VAL A . n A 1 61 LEU 61 1058 1058 LEU LEU A . n A 1 62 ASN 62 1059 1059 ASN ASN A . n A 1 63 LEU 63 1060 1060 LEU LEU A . n A 1 64 THR 64 1061 1061 THR THR A . n A 1 65 MET 65 1062 1062 MET MET A . n A 1 66 ASP 66 1063 1063 ASP ASP A . n A 1 67 LYS 67 1064 1064 LYS LYS A . n A 1 68 TYR 68 1065 1065 TYR TYR A . n A 1 69 THR 69 1066 1066 THR THR A . n A 1 70 LEU 70 1067 1067 LEU LEU A . n A 1 71 PRO 71 1068 1068 PRO PRO A . n A 1 72 ASN 72 1069 1069 ASN ASN A . n A 1 73 SER 73 1070 1070 SER SER A . n A 1 74 ASN 74 1071 1071 ASN ASN A . n A 1 75 ILE 75 1072 1072 ILE ILE A . n A 1 76 ASN 76 1073 1073 ASN ASN A . n A 1 77 ILE 77 1074 1074 ILE ILE A . n A 1 78 ILE 78 1075 1075 ILE ILE A . n A 1 79 HIS 79 1076 1076 HIS HIS A . n A 1 80 ILE 80 1077 1077 ILE ILE A . n A 1 81 PRO 81 1078 1078 PRO PRO A . n A 1 82 LEU 82 1079 1079 LEU LEU A . n A 1 83 VAL 83 1080 1080 VAL VAL A . n A 1 84 ASP 84 1081 1081 ASP ASP A . n A 1 85 ASP 85 1082 1082 ASP ASP A . n A 1 86 THR 86 1083 1083 THR THR A . n A 1 87 THR 87 1084 1084 THR THR A . n A 1 88 THR 88 1085 1085 THR THR A . n A 1 89 ASP 89 1086 1086 ASP ASP A . n A 1 90 ILE 90 1087 1087 ILE ILE A . n A 1 91 SER 91 1088 1088 SER SER A . n A 1 92 LYS 92 1089 1089 LYS LYS A . n A 1 93 TYR 93 1090 1090 TYR TYR A . n A 1 94 PHE 94 1091 1091 PHE PHE A . n A 1 95 ASP 95 1092 1092 ASP ASP A . n A 1 96 ASP 96 1093 1093 ASP ASP A . n A 1 97 VAL 97 1094 1094 VAL VAL A . n A 1 98 THR 98 1095 1095 THR THR A . n A 1 99 ALA 99 1096 1096 ALA ALA A . n A 1 100 PHE 100 1097 1097 PHE PHE A . n A 1 101 LEU 101 1098 1098 LEU LEU A . n A 1 102 SER 102 1099 1099 SER SER A . n A 1 103 LYS 103 1100 1100 LYS LYS A . n A 1 104 CYS 104 1101 1101 CYS CYS A . n A 1 105 ASP 105 1102 1102 ASP ASP A . n A 1 106 GLN 106 1103 1103 GLN GLN A . n A 1 107 ARG 107 1104 1104 ARG ARG A . n A 1 108 ASN 108 1105 1105 ASN ASN A . n A 1 109 GLU 109 1106 1106 GLU GLU A . n A 1 110 PRO 110 1107 1107 PRO PRO A . n A 1 111 VAL 111 1108 1108 VAL VAL A . n A 1 112 LEU 112 1109 1109 LEU LEU A . n A 1 113 VAL 113 1110 1110 VAL VAL A . n A 1 114 HIS 114 1111 1111 HIS HIS A . n A 1 115 SER 115 1112 1112 SER SER A . n A 1 116 ALA 116 1113 1113 ALA ALA A . n A 1 117 ALA 117 1114 1114 ALA ALA A . n A 1 118 GLY 118 1115 1115 GLY GLY A . n A 1 119 VAL 119 1116 1116 VAL VAL A . n A 1 120 ASN 120 1117 1117 ASN ASN A . n A 1 121 ARG 121 1118 1118 ARG ARG A . n A 1 122 SER 122 1119 1119 SER SER A . n A 1 123 GLY 123 1120 1120 GLY GLY A . n A 1 124 ALA 124 1121 1121 ALA ALA A . n A 1 125 MET 125 1122 1122 MET MET A . n A 1 126 ILE 126 1123 1123 ILE ILE A . n A 1 127 LEU 127 1124 1124 LEU LEU A . n A 1 128 ALA 128 1125 1125 ALA ALA A . n A 1 129 TYR 129 1126 1126 TYR TYR A . n A 1 130 LEU 130 1127 1127 LEU LEU A . n A 1 131 MET 131 1128 1128 MET MET A . n A 1 132 SER 132 1129 1129 SER SER A . n A 1 133 LYS 133 1130 1130 LYS LYS A . n A 1 134 ASN 134 1131 1131 ASN ASN A . n A 1 135 LYS 135 1132 1132 LYS LYS A . n A 1 136 GLU 136 1133 1133 GLU GLU A . n A 1 137 SER 137 1134 1134 SER SER A . n A 1 138 LEU 138 1135 1135 LEU LEU A . n A 1 139 PRO 139 1136 1136 PRO PRO A . n A 1 140 MET 140 1137 1137 MET MET A . n A 1 141 LEU 141 1138 1138 LEU LEU A . n A 1 142 TYR 142 1139 1139 TYR TYR A . n A 1 143 PHE 143 1140 1140 PHE PHE A . n A 1 144 LEU 144 1141 1141 LEU LEU A . n A 1 145 TYR 145 1142 1142 TYR TYR A . n A 1 146 VAL 146 1143 1143 VAL VAL A . n A 1 147 TYR 147 1144 1144 TYR TYR A . n A 1 148 HIS 148 1145 1145 HIS HIS A . n A 1 149 SER 149 1146 1146 SER SER A . n A 1 150 MET 150 1147 1147 MET MET A . n A 1 151 ARG 151 1148 1148 ARG ARG A . n A 1 152 ASP 152 1149 1149 ASP ASP A . n A 1 153 LEU 153 1150 1150 LEU LEU A . n A 1 154 ARG 154 1151 1151 ARG ARG A . n A 1 155 GLY 155 1152 1152 GLY GLY A . n A 1 156 ALA 156 1153 1153 ALA ALA A . n A 1 157 PHE 157 1154 1154 PHE PHE A . n A 1 158 VAL 158 1155 1155 VAL VAL A . n A 1 159 GLU 159 1156 1156 GLU GLU A . n A 1 160 ASN 160 1157 1157 ASN ASN A . n A 1 161 PRO 161 1158 1158 PRO PRO A . n A 1 162 SER 162 1159 1159 SER SER A . n A 1 163 PHE 163 1160 1160 PHE PHE A . n A 1 164 LYS 164 1161 1161 LYS LYS A . n A 1 165 ARG 165 1162 1162 ARG ARG A . n A 1 166 GLN 166 1163 1163 GLN GLN A . n A 1 167 ILE 167 1164 1164 ILE ILE A . n A 1 168 ILE 168 1165 1165 ILE ILE A . n A 1 169 GLU 169 1166 1166 GLU GLU A . n A 1 170 LYS 170 1167 1167 LYS LYS A . n A 1 171 TYR 171 1168 1168 TYR TYR A . n A 1 172 VAL 172 1169 1169 VAL VAL A . n A 1 173 ILE 173 1170 1170 ILE ILE A . n A 1 174 ASP 174 1171 ? ? ? A . n A 1 175 LYS 175 1172 ? ? ? A . n A 1 176 ASN 176 1173 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 1 1 PO4 PO4 A . C 3 BME 1 1174 1 BME BME A . D 3 BME 1 2 2 BME BME A . E 4 HOH 1 1175 2 HOH HOH A . E 4 HOH 2 1176 3 HOH HOH A . E 4 HOH 3 1177 4 HOH HOH A . E 4 HOH 4 1178 5 HOH HOH A . E 4 HOH 5 1179 6 HOH HOH A . E 4 HOH 6 1180 7 HOH HOH A . E 4 HOH 7 1181 8 HOH HOH A . E 4 HOH 8 1182 9 HOH HOH A . E 4 HOH 9 1183 10 HOH HOH A . E 4 HOH 10 1184 11 HOH HOH A . E 4 HOH 11 1185 12 HOH HOH A . E 4 HOH 12 1186 13 HOH HOH A . E 4 HOH 13 1187 14 HOH HOH A . E 4 HOH 14 1188 15 HOH HOH A . E 4 HOH 15 1189 16 HOH HOH A . E 4 HOH 16 1190 17 HOH HOH A . E 4 HOH 17 1191 18 HOH HOH A . E 4 HOH 18 1192 19 HOH HOH A . E 4 HOH 19 1193 20 HOH HOH A . E 4 HOH 20 1194 21 HOH HOH A . E 4 HOH 21 1195 22 HOH HOH A . E 4 HOH 22 1196 23 HOH HOH A . E 4 HOH 23 1197 24 HOH HOH A . E 4 HOH 24 1198 25 HOH HOH A . E 4 HOH 25 1199 26 HOH HOH A . E 4 HOH 26 1200 27 HOH HOH A . E 4 HOH 27 1201 28 HOH HOH A . E 4 HOH 28 1202 29 HOH HOH A . E 4 HOH 29 1203 30 HOH HOH A . E 4 HOH 30 1204 31 HOH HOH A . E 4 HOH 31 1205 32 HOH HOH A . E 4 HOH 32 1206 33 HOH HOH A . E 4 HOH 33 1207 34 HOH HOH A . E 4 HOH 34 1208 35 HOH HOH A . E 4 HOH 35 1209 36 HOH HOH A . E 4 HOH 36 1210 37 HOH HOH A . E 4 HOH 37 1211 38 HOH HOH A . E 4 HOH 38 1212 39 HOH HOH A . E 4 HOH 39 1213 40 HOH HOH A . E 4 HOH 40 1214 41 HOH HOH A . E 4 HOH 41 1215 42 HOH HOH A . E 4 HOH 42 1216 43 HOH HOH A . E 4 HOH 43 1217 44 HOH HOH A . E 4 HOH 44 1218 45 HOH HOH A . E 4 HOH 45 1219 46 HOH HOH A . E 4 HOH 46 1220 47 HOH HOH A . E 4 HOH 47 1221 48 HOH HOH A . E 4 HOH 48 1222 49 HOH HOH A . E 4 HOH 49 1223 50 HOH HOH A . E 4 HOH 50 1224 51 HOH HOH A . E 4 HOH 51 1225 52 HOH HOH A . E 4 HOH 52 1226 53 HOH HOH A . E 4 HOH 53 1227 54 HOH HOH A . E 4 HOH 54 1228 55 HOH HOH A . E 4 HOH 55 1229 56 HOH HOH A . E 4 HOH 56 1230 57 HOH HOH A . E 4 HOH 57 1231 58 HOH HOH A . E 4 HOH 58 1232 59 HOH HOH A . E 4 HOH 59 1233 60 HOH HOH A . E 4 HOH 60 1234 61 HOH HOH A . E 4 HOH 61 1235 62 HOH HOH A . E 4 HOH 62 1236 63 HOH HOH A . E 4 HOH 63 1237 64 HOH HOH A . E 4 HOH 64 1238 65 HOH HOH A . E 4 HOH 65 1239 66 HOH HOH A . E 4 HOH 66 1240 67 HOH HOH A . E 4 HOH 67 1241 68 HOH HOH A . E 4 HOH 68 1242 69 HOH HOH A . E 4 HOH 69 1243 70 HOH HOH A . E 4 HOH 70 1244 71 HOH HOH A . E 4 HOH 71 1245 72 HOH HOH A . E 4 HOH 72 1246 73 HOH HOH A . E 4 HOH 73 1247 74 HOH HOH A . E 4 HOH 74 1248 75 HOH HOH A . E 4 HOH 75 1249 76 HOH HOH A . E 4 HOH 76 1250 77 HOH HOH A . E 4 HOH 77 1251 78 HOH HOH A . E 4 HOH 78 1252 79 HOH HOH A . E 4 HOH 79 1253 80 HOH HOH A . E 4 HOH 80 1254 81 HOH HOH A . E 4 HOH 81 1255 82 HOH HOH A . E 4 HOH 82 1256 83 HOH HOH A . E 4 HOH 83 1257 84 HOH HOH A . E 4 HOH 84 1258 85 HOH HOH A . E 4 HOH 85 1259 86 HOH HOH A . E 4 HOH 86 1260 87 HOH HOH A . E 4 HOH 87 1261 88 HOH HOH A . E 4 HOH 88 1262 89 HOH HOH A . E 4 HOH 89 1263 90 HOH HOH A . E 4 HOH 90 1264 91 HOH HOH A . E 4 HOH 91 1265 92 HOH HOH A . E 4 HOH 92 1266 93 HOH HOH A . E 4 HOH 93 1267 94 HOH HOH A . E 4 HOH 94 1268 95 HOH HOH A . E 4 HOH 95 1269 96 HOH HOH A . E 4 HOH 96 1270 97 HOH HOH A . E 4 HOH 97 1271 98 HOH HOH A . E 4 HOH 98 1272 99 HOH HOH A . E 4 HOH 99 1273 100 HOH HOH A . E 4 HOH 100 1274 101 HOH HOH A . E 4 HOH 101 1275 102 HOH HOH A . E 4 HOH 102 1276 103 HOH HOH A . E 4 HOH 103 1277 104 HOH HOH A . E 4 HOH 104 1278 105 HOH HOH A . E 4 HOH 105 1279 106 HOH HOH A . E 4 HOH 106 1280 107 HOH HOH A . E 4 HOH 107 1281 108 HOH HOH A . E 4 HOH 108 1282 109 HOH HOH A . E 4 HOH 109 1283 110 HOH HOH A . E 4 HOH 110 1284 111 HOH HOH A . E 4 HOH 111 1285 112 HOH HOH A . E 4 HOH 112 1286 113 HOH HOH A . E 4 HOH 113 1287 114 HOH HOH A . E 4 HOH 114 1288 115 HOH HOH A . E 4 HOH 115 1289 116 HOH HOH A . E 4 HOH 116 1290 117 HOH HOH A . E 4 HOH 117 1291 118 HOH HOH A . E 4 HOH 118 1292 119 HOH HOH A . E 4 HOH 119 1293 120 HOH HOH A . E 4 HOH 120 1294 121 HOH HOH A . E 4 HOH 121 1295 122 HOH HOH A . E 4 HOH 122 1296 123 HOH HOH A . E 4 HOH 123 1297 124 HOH HOH A . E 4 HOH 124 1298 125 HOH HOH A . E 4 HOH 125 1299 126 HOH HOH A . E 4 HOH 126 1300 127 HOH HOH A . E 4 HOH 127 1301 128 HOH HOH A . E 4 HOH 128 1302 129 HOH HOH A . E 4 HOH 129 1303 130 HOH HOH A . E 4 HOH 130 1304 131 HOH HOH A . E 4 HOH 131 1305 132 HOH HOH A . E 4 HOH 132 1306 133 HOH HOH A . E 4 HOH 133 1307 134 HOH HOH A . E 4 HOH 134 1308 135 HOH HOH A . E 4 HOH 135 1309 136 HOH HOH A . E 4 HOH 136 1310 137 HOH HOH A . E 4 HOH 137 1311 138 HOH HOH A . E 4 HOH 138 1312 139 HOH HOH A . E 4 HOH 139 1313 140 HOH HOH A . E 4 HOH 140 1314 141 HOH HOH A . E 4 HOH 141 1315 142 HOH HOH A . E 4 HOH 142 1316 143 HOH HOH A . E 4 HOH 143 1317 144 HOH HOH A . E 4 HOH 144 1318 145 HOH HOH A . E 4 HOH 145 1319 146 HOH HOH A . E 4 HOH 146 1320 147 HOH HOH A . E 4 HOH 147 1321 148 HOH HOH A . E 4 HOH 148 1322 149 HOH HOH A . E 4 HOH 149 1323 150 HOH HOH A . E 4 HOH 150 1324 151 HOH HOH A . E 4 HOH 151 1325 152 HOH HOH A . E 4 HOH 152 1326 153 HOH HOH A . E 4 HOH 153 1327 154 HOH HOH A . E 4 HOH 154 1328 155 HOH HOH A . E 4 HOH 155 1329 156 HOH HOH A . E 4 HOH 156 1330 157 HOH HOH A . E 4 HOH 157 1331 158 HOH HOH A . E 4 HOH 158 1332 159 HOH HOH A . E 4 HOH 159 1333 160 HOH HOH A . E 4 HOH 160 1334 161 HOH HOH A . E 4 HOH 161 1335 162 HOH HOH A . E 4 HOH 162 1336 163 HOH HOH A . E 4 HOH 163 1337 164 HOH HOH A . E 4 HOH 164 1338 165 HOH HOH A . E 4 HOH 165 1339 166 HOH HOH A . E 4 HOH 166 1340 167 HOH HOH A . E 4 HOH 167 1341 168 HOH HOH A . E 4 HOH 168 1342 169 HOH HOH A . E 4 HOH 169 1343 170 HOH HOH A . E 4 HOH 170 1344 171 HOH HOH A . E 4 HOH 171 1345 172 HOH HOH A . E 4 HOH 172 1346 173 HOH HOH A . E 4 HOH 173 1347 174 HOH HOH A . E 4 HOH 174 1348 175 HOH HOH A . E 4 HOH 175 1349 176 HOH HOH A . E 4 HOH 176 1350 177 HOH HOH A . E 4 HOH 177 1351 178 HOH HOH A . E 4 HOH 178 1352 179 HOH HOH A . E 4 HOH 179 1353 180 HOH HOH A . E 4 HOH 180 1354 181 HOH HOH A . E 4 HOH 181 1355 182 HOH HOH A . E 4 HOH 182 1356 183 HOH HOH A . E 4 HOH 183 1357 184 HOH HOH A . E 4 HOH 184 1358 185 HOH HOH A . E 4 HOH 185 1359 186 HOH HOH A . E 4 HOH 186 1360 187 HOH HOH A . E 4 HOH 187 1361 188 HOH HOH A . E 4 HOH 188 1362 189 HOH HOH A . E 4 HOH 189 1363 190 HOH HOH A . E 4 HOH 190 1364 191 HOH HOH A . E 4 HOH 191 1365 192 HOH HOH A . E 4 HOH 192 1366 193 HOH HOH A . E 4 HOH 193 1367 194 HOH HOH A . E 4 HOH 194 1368 195 HOH HOH A . E 4 HOH 195 1369 196 HOH HOH A . E 4 HOH 196 1370 197 HOH HOH A . E 4 HOH 197 1371 198 HOH HOH A . E 4 HOH 198 1372 199 HOH HOH A . E 4 HOH 199 1373 200 HOH HOH A . E 4 HOH 200 1374 201 HOH HOH A . E 4 HOH 201 1375 202 HOH HOH A . E 4 HOH 202 1376 203 HOH HOH A . E 4 HOH 203 1377 204 HOH HOH A . E 4 HOH 204 1378 205 HOH HOH A . E 4 HOH 205 1379 206 HOH HOH A . E 4 HOH 206 1380 207 HOH HOH A . E 4 HOH 207 1381 208 HOH HOH A . E 4 HOH 208 1382 209 HOH HOH A . E 4 HOH 209 1383 210 HOH HOH A . E 4 HOH 210 1384 211 HOH HOH A . E 4 HOH 211 1385 212 HOH HOH A . E 4 HOH 212 1386 213 HOH HOH A . E 4 HOH 213 1387 214 HOH HOH A . E 4 HOH 214 1388 215 HOH HOH A . E 4 HOH 215 1389 216 HOH HOH A . E 4 HOH 216 1390 217 HOH HOH A . E 4 HOH 217 1391 218 HOH HOH A . E 4 HOH 218 1392 219 HOH HOH A . E 4 HOH 219 1393 220 HOH HOH A . E 4 HOH 220 1394 221 HOH HOH A . E 4 HOH 221 1395 222 HOH HOH A . E 4 HOH 222 1396 223 HOH HOH A . E 4 HOH 223 1397 224 HOH HOH A . E 4 HOH 224 1398 225 HOH HOH A . E 4 HOH 225 1399 226 HOH HOH A . E 4 HOH 226 1400 227 HOH HOH A . E 4 HOH 227 1401 228 HOH HOH A . E 4 HOH 228 1402 229 HOH HOH A . E 4 HOH 229 1403 230 HOH HOH A . E 4 HOH 230 1404 231 HOH HOH A . E 4 HOH 231 1405 232 HOH HOH A . E 4 HOH 232 1406 233 HOH HOH A . E 4 HOH 233 1407 234 HOH HOH A . E 4 HOH 234 1408 235 HOH HOH A . E 4 HOH 235 1409 236 HOH HOH A . E 4 HOH 236 1410 237 HOH HOH A . E 4 HOH 237 1411 238 HOH HOH A . E 4 HOH 238 1412 239 HOH HOH A . E 4 HOH 239 1413 240 HOH HOH A . E 4 HOH 240 1414 241 HOH HOH A . E 4 HOH 241 1415 242 HOH HOH A . E 4 HOH 242 1416 243 HOH HOH A . E 4 HOH 243 1417 244 HOH HOH A . E 4 HOH 244 1418 245 HOH HOH A . E 4 HOH 245 1419 246 HOH HOH A . E 4 HOH 246 1420 247 HOH HOH A . E 4 HOH 247 1421 248 HOH HOH A . E 4 HOH 248 1422 249 HOH HOH A . E 4 HOH 249 1423 250 HOH HOH A . E 4 HOH 250 1424 251 HOH HOH A . E 4 HOH 251 1425 252 HOH HOH A . E 4 HOH 252 1426 253 HOH HOH A . E 4 HOH 253 1427 254 HOH HOH A . E 4 HOH 254 1428 255 HOH HOH A . E 4 HOH 255 1429 256 HOH HOH A . E 4 HOH 256 1430 257 HOH HOH A . E 4 HOH 257 1431 258 HOH HOH A . E 4 HOH 258 1432 259 HOH HOH A . E 4 HOH 259 1433 260 HOH HOH A . E 4 HOH 260 1434 261 HOH HOH A . E 4 HOH 261 1435 262 HOH HOH A . E 4 HOH 262 1436 263 HOH HOH A . E 4 HOH 263 1437 264 HOH HOH A . E 4 HOH 264 1438 265 HOH HOH A . E 4 HOH 265 1439 266 HOH HOH A . E 4 HOH 266 1440 267 HOH HOH A . E 4 HOH 267 1441 268 HOH HOH A . E 4 HOH 268 1442 269 HOH HOH A . E 4 HOH 269 1443 270 HOH HOH A . E 4 HOH 270 1444 271 HOH HOH A . E 4 HOH 271 1445 272 HOH HOH A . E 4 HOH 272 1446 273 HOH HOH A . E 4 HOH 273 1447 274 HOH HOH A . E 4 HOH 274 1448 275 HOH HOH A . E 4 HOH 275 1449 276 HOH HOH A . E 4 HOH 276 1450 277 HOH HOH A . E 4 HOH 277 1451 278 HOH HOH A . E 4 HOH 278 1452 279 HOH HOH A . E 4 HOH 279 1453 280 HOH HOH A . E 4 HOH 280 1454 281 HOH HOH A . E 4 HOH 281 1455 282 HOH HOH A . E 4 HOH 282 1456 283 HOH HOH A . E 4 HOH 283 1457 284 HOH HOH A . E 4 HOH 284 1458 285 HOH HOH A . E 4 HOH 285 1459 286 HOH HOH A . E 4 HOH 286 1460 287 HOH HOH A . E 4 HOH 287 1461 288 HOH HOH A . E 4 HOH 288 1462 289 HOH HOH A . E 4 HOH 289 1463 290 HOH HOH A . E 4 HOH 290 1464 291 HOH HOH A . E 4 HOH 291 1465 292 HOH HOH A . E 4 HOH 292 1466 293 HOH HOH A . E 4 HOH 293 1467 294 HOH HOH A . E 4 HOH 294 1468 295 HOH HOH A . E 4 HOH 295 1469 296 HOH HOH A . E 4 HOH 296 1470 297 HOH HOH A . E 4 HOH 297 1471 298 HOH HOH A . E 4 HOH 298 1472 299 HOH HOH A . E 4 HOH 299 1473 300 HOH HOH A . E 4 HOH 300 1474 301 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3230 ? 1 MORE -42.0 ? 1 'SSA (A^2)' 15430 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 1243 ? E HOH . 2 1 A HOH 1325 ? E HOH . 3 1 A HOH 1373 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 ADSC 'data collection' Quantum ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 MOLREP phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 1027 ? ? -121.78 -53.99 2 1 SER A 1112 ? ? -128.88 -151.55 3 1 VAL A 1116 ? ? -121.11 -54.11 4 1 ASN A 1117 ? ? -101.60 -67.46 5 1 VAL A 1155 ? ? 30.91 57.66 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 998 ? A GLY 1 2 1 Y 1 A PRO 999 ? A PRO 2 3 1 Y 1 A GLU 1000 ? A GLU 3 4 1 Y 1 A ILE 1001 ? A ILE 4 5 1 Y 1 A ARG 1002 ? A ARG 5 6 1 Y 1 A MET 1003 ? A MET 6 7 1 Y 1 A ASP 1004 ? A ASP 7 8 1 Y 1 A LYS 1005 ? A LYS 8 9 1 Y 1 A LYS 1006 ? A LYS 9 10 1 Y 1 A ASP 1171 ? A ASP 174 11 1 Y 1 A LYS 1172 ? A LYS 175 12 1 Y 1 A ASN 1173 ? A ASN 176 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BME C1 C N N 74 BME C2 C N N 75 BME O1 O N N 76 BME S2 S N N 77 BME H11 H N N 78 BME H12 H N N 79 BME H21 H N N 80 BME H22 H N N 81 BME HO1 H N N 82 BME HS2 H N N 83 CYS N N N N 84 CYS CA C N R 85 CYS C C N N 86 CYS O O N N 87 CYS CB C N N 88 CYS SG S N N 89 CYS OXT O N N 90 CYS H H N N 91 CYS H2 H N N 92 CYS HA H N N 93 CYS HB2 H N N 94 CYS HB3 H N N 95 CYS HG H N N 96 CYS HXT H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PO4 P P N N 283 PO4 O1 O N N 284 PO4 O2 O N N 285 PO4 O3 O N N 286 PO4 O4 O N N 287 PRO N N N N 288 PRO CA C N S 289 PRO C C N N 290 PRO O O N N 291 PRO CB C N N 292 PRO CG C N N 293 PRO CD C N N 294 PRO OXT O N N 295 PRO H H N N 296 PRO HA H N N 297 PRO HB2 H N N 298 PRO HB3 H N N 299 PRO HG2 H N N 300 PRO HG3 H N N 301 PRO HD2 H N N 302 PRO HD3 H N N 303 PRO HXT H N N 304 SER N N N N 305 SER CA C N S 306 SER C C N N 307 SER O O N N 308 SER CB C N N 309 SER OG O N N 310 SER OXT O N N 311 SER H H N N 312 SER H2 H N N 313 SER HA H N N 314 SER HB2 H N N 315 SER HB3 H N N 316 SER HG H N N 317 SER HXT H N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TYR N N N N 336 TYR CA C N S 337 TYR C C N N 338 TYR O O N N 339 TYR CB C N N 340 TYR CG C Y N 341 TYR CD1 C Y N 342 TYR CD2 C Y N 343 TYR CE1 C Y N 344 TYR CE2 C Y N 345 TYR CZ C Y N 346 TYR OH O N N 347 TYR OXT O N N 348 TYR H H N N 349 TYR H2 H N N 350 TYR HA H N N 351 TYR HB2 H N N 352 TYR HB3 H N N 353 TYR HD1 H N N 354 TYR HD2 H N N 355 TYR HE1 H N N 356 TYR HE2 H N N 357 TYR HH H N N 358 TYR HXT H N N 359 VAL N N N N 360 VAL CA C N S 361 VAL C C N N 362 VAL O O N N 363 VAL CB C N N 364 VAL CG1 C N N 365 VAL CG2 C N N 366 VAL OXT O N N 367 VAL H H N N 368 VAL H2 H N N 369 VAL HA H N N 370 VAL HB H N N 371 VAL HG11 H N N 372 VAL HG12 H N N 373 VAL HG13 H N N 374 VAL HG21 H N N 375 VAL HG22 H N N 376 VAL HG23 H N N 377 VAL HXT H N N 378 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BME C1 C2 sing N N 70 BME C1 O1 sing N N 71 BME C1 H11 sing N N 72 BME C1 H12 sing N N 73 BME C2 S2 sing N N 74 BME C2 H21 sing N N 75 BME C2 H22 sing N N 76 BME O1 HO1 sing N N 77 BME S2 HS2 sing N N 78 CYS N CA sing N N 79 CYS N H sing N N 80 CYS N H2 sing N N 81 CYS CA C sing N N 82 CYS CA CB sing N N 83 CYS CA HA sing N N 84 CYS C O doub N N 85 CYS C OXT sing N N 86 CYS CB SG sing N N 87 CYS CB HB2 sing N N 88 CYS CB HB3 sing N N 89 CYS SG HG sing N N 90 CYS OXT HXT sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PO4 P O1 doub N N 269 PO4 P O2 sing N N 270 PO4 P O3 sing N N 271 PO4 P O4 sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 BETA-MERCAPTOETHANOL BME 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2RF6 _pdbx_initial_refinement_model.details 'PDB Entry 2RF6' #