HEADER HYDROLASE 26-MAR-08 3CNQ TITLE PROSUBTILISIN SUBSTRATE COMPLEX OF SUBTILISIN SUBT_BACAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUBTILISIN BPN'; COMPND 3 CHAIN: P; COMPND 4 FRAGMENT: PRODOMAIN; COMPND 5 SYNONYM: SUBTILISIN NOVO, SUBTILISIN DFE, ALKALINE PROTEASE; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SUBTILISIN BPN'; COMPND 10 CHAIN: S; COMPND 11 FRAGMENT: ENZYME DOMAIN; COMPND 12 SYNONYM: SUBTILISIN NOVO, SUBTILISIN DFE, ALKALINE PROTEASE; COMPND 13 EC: 3.4.21.62; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS AMYLOLIQUEFACIENS; SOURCE 3 ORGANISM_TAXID: 1390; SOURCE 4 GENE: APR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PG5; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: BACILLUS AMYLOLIQUEFACIENS; SOURCE 12 ORGANISM_TAXID: 1390; SOURCE 13 GENE: APR; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PG5 KEYWDS UNCLEAVED, PROENZYME, SUBSTRATE COMPLEX, HYDROLASE, METAL-BINDING, KEYWDS 2 PROTEASE, SECRETED, SERINE PROTEASE, SPORULATION, ZYMOGEN EXPDTA X-RAY DIFFRACTION AUTHOR D.T.GALLAGHER,P.N.BRYAN REVDAT 7 06-NOV-24 3CNQ 1 REMARK REVDAT 6 20-OCT-21 3CNQ 1 REMARK SEQADV LINK REVDAT 5 25-OCT-17 3CNQ 1 REMARK REVDAT 4 21-APR-10 3CNQ 1 JRNL REVDAT 3 31-MAR-10 3CNQ 1 JRNL SOURCE REVDAT 2 24-FEB-09 3CNQ 1 VERSN REVDAT 1 06-MAY-08 3CNQ 0 JRNL AUTH B.RUAN,V.LONDON,K.E.FISHER,D.T.GALLAGHER,P.N.BRYAN JRNL TITL ENGINEERING SUBSTRATE PREFERENCE IN SUBTILISIN: STRUCTURAL JRNL TITL 2 AND KINETIC ANALYSIS OF A SPECIFICITY MUTANT. JRNL REF BIOCHEMISTRY V. 47 6628 2008 JRNL REFN ISSN 0006-2960 JRNL PMID 18507395 JRNL DOI 10.1021/BI800089F REMARK 2 REMARK 2 RESOLUTION. 1.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 32338 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1641 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2067 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 145 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2401 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 259 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 0.86000 REMARK 3 B33 (A**2) : -1.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.121 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.120 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.199 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2429 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3300 ; 1.506 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 330 ; 5.628 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;40.352 ;25.926 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 378 ;14.648 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 4.593 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 382 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1808 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1150 ; 0.226 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1661 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 148 ; 0.127 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.042 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.327 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.117 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 2 ; 0.275 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1676 ; 1.036 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2615 ; 1.684 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 845 ; 2.659 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 685 ; 3.872 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3CNQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000046996. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32590 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.29300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG8K, 0.2 M ZN ACETATE, 0.1 M NA REMARK 280 CACODYLATE, PH 6.5, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.59750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.55600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.47050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.55600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.59750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.47050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -155.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: P, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -159.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 -21.59750 REMARK 350 BIOMT2 1 0.000000 -1.000000 0.000000 -36.47050 REMARK 350 BIOMT3 1 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: S REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -159.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: P REMARK 350 BIOMT1 1 -1.000000 0.000000 0.000000 -21.59750 REMARK 350 BIOMT2 1 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 46.55600 REMARK 350 APPLY THE FOLLOWING TO CHAINS: S REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET P 2 REMARK 465 GLY P 3 REMARK 465 GLY P 4 REMARK 465 LYS P 5 REMARK 465 SER P 6 REMARK 465 ASN P 7 REMARK 465 GLY P 8 REMARK 465 THR P 80 REMARK 465 SER P 81 REMARK 465 ALA S 1 REMARK 465 LYS S 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO S 40 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU P 77 51.60 -97.50 REMARK 500 TYR S 6 -15.83 -47.25 REMARK 500 ALA S 32 -146.00 -160.46 REMARK 500 SER S 63 -27.12 106.53 REMARK 500 SER S 125 54.43 -90.69 REMARK 500 ASP S 197 -60.54 -102.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN S 281 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS S 17 ND1 REMARK 620 2 HOH S 339 O 102.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN S 280 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS S 39 ND1 REMARK 620 2 ASP S 41 OD1 122.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN S 278 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA S 169 O REMARK 620 2 TYR S 171 O 93.9 REMARK 620 3 VAL S 174 O 108.7 92.8 REMARK 620 4 HOH S 319 O 99.3 86.5 151.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN S 279 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS S 238 ND1 REMARK 620 2 HOH S 401 O 122.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN S 282 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP S 259 OD2 REMARK 620 2 HOH S 473 O 89.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN S 278 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN S 279 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN S 280 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN S 281 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN S 282 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BGO RELATED DB: PDB REMARK 900 AZIDE COMPLEX REMARK 900 RELATED ID: 3CO0 RELATED DB: PDB REMARK 900 FLUORIDE TRIGGER REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHOR STATES THAT RESIDUES 17-23 TMSTMSA WAS REPLACED WITH GFKSC DBREF 3CNQ P 4 76 UNP P00782 SUBT_BACAM 32 106 DBREF 3CNQ S 1 275 UNP P00782 SUBT_BACAM 108 382 SEQADV 3CNQ MET P 2 UNP P00782 EXPRESSION TAG SEQADV 3CNQ GLY P 3 UNP P00782 EXPRESSION TAG SEQADV 3CNQ P UNP P00782 THR 47 SEE REMARK 999 SEQADV 3CNQ P UNP P00782 MET 48 SEE REMARK 999 SEQADV 3CNQ P UNP P00782 SER 49 SEE REMARK 999 SEQADV 3CNQ P UNP P00782 THR 50 SEE REMARK 999 SEQADV 3CNQ P UNP P00782 MET 51 SEE REMARK 999 SEQADV 3CNQ P UNP P00782 SER 52 SEE REMARK 999 SEQADV 3CNQ P UNP P00782 ALA 53 SEE REMARK 999 SEQADV 3CNQ GLU P 27 UNP P00782 LYS 57 ENGINEERED MUTATION SEQADV 3CNQ LEU P 37 UNP P00782 VAL 67 ENGINEERED MUTATION SEQADV 3CNQ CYS P 40 UNP P00782 GLN 70 ENGINEERED MUTATION SEQADV 3CNQ GLU P 57 UNP P00782 LYS 87 ENGINEERED MUTATION SEQADV 3CNQ LYS P 72 UNP P00782 HIS 102 ENGINEERED MUTATION SEQADV 3CNQ LEU P 73 UNP P00782 VAL 103 ENGINEERED MUTATION SEQADV 3CNQ TYR P 74 UNP P00782 ALA 104 ENGINEERED MUTATION SEQADV 3CNQ ARG P 75 UNP P00782 HIS 105 ENGINEERED MUTATION SEQADV 3CNQ LEU P 77 UNP P00782 TYR 107 ENGINEERED MUTATION SEQADV 3CNQ SER P 78 UNP P00782 EXPRESSION TAG SEQADV 3CNQ ALA P 79 UNP P00782 EXPRESSION TAG SEQADV 3CNQ THR P 80 UNP P00782 EXPRESSION TAG SEQADV 3CNQ SER P 81 UNP P00782 EXPRESSION TAG SEQADV 3CNQ LYS S 2 UNP P00782 GLN 109 ENGINEERED MUTATION SEQADV 3CNQ CYS S 3 UNP P00782 SER 110 ENGINEERED MUTATION SEQADV 3CNQ SER S 5 UNP P00782 PRO 112 ENGINEERED MUTATION SEQADV 3CNQ ALA S 9 UNP P00782 SER 116 ENGINEERED MUTATION SEQADV 3CNQ LEU S 31 UNP P00782 ILE 138 ENGINEERED MUTATION SEQADV 3CNQ ALA S 32 UNP P00782 ASP 139 ENGINEERED MUTATION SEQADV 3CNQ ASN S 43 UNP P00782 LYS 150 ENGINEERED MUTATION SEQADV 3CNQ PHE S 50 UNP P00782 MET 157 ENGINEERED MUTATION SEQADV 3CNQ S UNP P00782 VAL 179 DELETION SEQADV 3CNQ S UNP P00782 ALA 180 DELETION SEQADV 3CNQ S UNP P00782 ALA 181 DELETION SEQADV 3CNQ S UNP P00782 LEU 182 DELETION SEQADV 3CNQ S UNP P00782 ASN 183 DELETION SEQADV 3CNQ S UNP P00782 ASN 184 DELETION SEQADV 3CNQ S UNP P00782 SER 185 DELETION SEQADV 3CNQ S UNP P00782 ILE 186 DELETION SEQADV 3CNQ S UNP P00782 GLY 187 DELETION SEQADV 3CNQ ALA S 74 UNP P00782 GLY 190 ENGINEERED MUTATION SEQADV 3CNQ ALA S 104 UNP P00782 TYR 211 ENGINEERED MUTATION SEQADV 3CNQ SER S 128 UNP P00782 GLY 235 ENGINEERED MUTATION SEQADV 3CNQ SER S 156 UNP P00782 GLU 263 ENGINEERED MUTATION SEQADV 3CNQ SER S 166 UNP P00782 GLY 273 ENGINEERED MUTATION SEQADV 3CNQ ALA S 169 UNP P00782 GLY 276 ENGINEERED MUTATION SEQADV 3CNQ PRO S 188 UNP P00782 SER 295 ENGINEERED MUTATION SEQADV 3CNQ CYS S 206 UNP P00782 GLN 313 ENGINEERED MUTATION SEQADV 3CNQ GLY S 212 UNP P00782 ASN 319 ENGINEERED MUTATION SEQADV 3CNQ LEU S 217 UNP P00782 TYR 324 ENGINEERED MUTATION SEQADV 3CNQ SER S 218 UNP P00782 ASN 325 ENGINEERED MUTATION SEQADV 3CNQ ALA S 221 UNP P00782 SER 328 ENGINEERED MUTATION SEQADV 3CNQ ALA S 254 UNP P00782 THR 361 ENGINEERED MUTATION SEQADV 3CNQ GLU S 271 UNP P00782 GLN 378 ENGINEERED MUTATION SEQRES 1 P 80 MET GLY GLY LYS SER ASN GLY GLU LYS LYS TYR ILE VAL SEQRES 2 P 80 GLY PHE LYS GLN GLY PHE LYS SER CYS ALA LYS LYS GLU SEQRES 3 P 80 ASP VAL ILE SER GLU LYS GLY GLY LYS LEU GLN LYS CYS SEQRES 4 P 80 PHE LYS TYR VAL ASP ALA ALA SER ALA THR LEU ASN GLU SEQRES 5 P 80 LYS ALA VAL GLU GLU LEU LYS LYS ASP PRO SER VAL ALA SEQRES 6 P 80 TYR VAL GLU GLU ASP LYS LEU TYR ARG ALA LEU SER ALA SEQRES 7 P 80 THR SER SEQRES 1 S 266 ALA LYS CYS VAL SER TYR GLY VAL ALA GLN ILE LYS ALA SEQRES 2 S 266 PRO ALA LEU HIS SER GLN GLY TYR THR GLY SER ASN VAL SEQRES 3 S 266 LYS VAL ALA VAL LEU ALA SER GLY ILE ASP SER SER HIS SEQRES 4 S 266 PRO ASP LEU ASN VAL ALA GLY GLY ALA SER PHE VAL PRO SEQRES 5 S 266 SER GLU THR ASN PRO PHE GLN ASP ASN ASN SER HIS GLY SEQRES 6 S 266 THR HIS VAL ALA GLY THR VAL LEU ALA VAL ALA PRO SER SEQRES 7 S 266 ALA SER LEU TYR ALA VAL LYS VAL LEU GLY ALA ASP GLY SEQRES 8 S 266 SER GLY GLN ALA SER TRP ILE ILE ASN GLY ILE GLU TRP SEQRES 9 S 266 ALA ILE ALA ASN ASN MET ASP VAL ILE ASN MET SER LEU SEQRES 10 S 266 GLY SER PRO SER GLY SER ALA ALA LEU LYS ALA ALA VAL SEQRES 11 S 266 ASP LYS ALA VAL ALA SER GLY VAL VAL VAL VAL ALA ALA SEQRES 12 S 266 ALA GLY ASN SER GLY THR SER GLY SER SER SER THR VAL SEQRES 13 S 266 SER TYR PRO ALA LYS TYR PRO SER VAL ILE ALA VAL GLY SEQRES 14 S 266 ALA VAL ASP SER SER ASN GLN ARG ALA PRO PHE SER SER SEQRES 15 S 266 VAL GLY PRO GLU LEU ASP VAL MET ALA PRO GLY VAL SER SEQRES 16 S 266 ILE CYS SER THR LEU PRO GLY GLY LYS TYR GLY ALA LEU SEQRES 17 S 266 SER GLY THR ALA MET ALA SER PRO HIS VAL ALA GLY ALA SEQRES 18 S 266 ALA ALA LEU ILE LEU SER LYS HIS PRO ASN TRP THR ASN SEQRES 19 S 266 THR GLN VAL ARG SER SER LEU GLU ASN THR ALA THR LYS SEQRES 20 S 266 LEU GLY ASP SER PHE TYR TYR GLY LYS GLY LEU ILE ASN SEQRES 21 S 266 VAL GLU ALA ALA ALA GLN HET ZN S 278 1 HET ZN S 279 1 HET ZN S 280 1 HET ZN S 281 1 HET ZN S 282 1 HETNAM ZN ZINC ION FORMUL 3 ZN 5(ZN 2+) FORMUL 8 HOH *259(H2 O) HELIX 1 1 SER P 22 GLU P 32 1 11 HELIX 2 2 ASN P 52 LYS P 61 1 10 HELIX 3 3 TYR S 6 ILE S 11 1 6 HELIX 4 4 LYS S 12 GLN S 19 1 8 HELIX 5 5 SER S 63 ALA S 85 1 14 HELIX 6 6 ALA S 104 ASN S 117 1 14 HELIX 7 7 SER S 132 SER S 145 1 14 HELIX 8 8 GLY S 219 HIS S 238 1 20 HELIX 9 9 THR S 242 THR S 253 1 12 HELIX 10 10 ASP S 259 GLY S 264 1 6 HELIX 11 11 ASN S 269 ALA S 274 1 6 SHEET 1 A 4 LYS P 36 CYS P 40 0 SHEET 2 A 4 ALA P 46 THR P 50 -1 O SER P 48 N GLN P 38 SHEET 3 A 4 LYS P 11 PHE P 16 -1 N VAL P 14 O ALA P 47 SHEET 4 A 4 VAL P 65 GLU P 70 -1 O GLU P 69 N ILE P 13 SHEET 1 B 3 SER S 101 GLN S 103 0 SHEET 2 B 3 LEU P 73 ALA P 76 -1 N TYR P 74 O GLY S 102 SHEET 3 B 3 LEU S 126 GLY S 127 -1 O GLY S 127 N ARG P 75 SHEET 1 C 7 GLY S 46 SER S 49 0 SHEET 2 C 7 SER S 89 LYS S 94 1 O ALA S 92 N GLY S 46 SHEET 3 C 7 LYS S 27 ALA S 32 1 N VAL S 30 O TYR S 91 SHEET 4 C 7 VAL S 121 MET S 124 1 O VAL S 121 N ALA S 29 SHEET 5 C 7 VAL S 148 ALA S 152 1 O VAL S 150 N ILE S 122 SHEET 6 C 7 ILE S 175 VAL S 180 1 O ILE S 175 N ALA S 151 SHEET 7 C 7 VAL S 198 PRO S 201 1 O VAL S 198 N GLY S 178 SHEET 1 D 2 ILE S 205 LEU S 209 0 SHEET 2 D 2 LYS S 213 LEU S 217 -1 O LEU S 217 N ILE S 205 SSBOND 1 CYS P 23 CYS P 40 1555 1555 2.06 SSBOND 2 CYS S 3 CYS S 206 1555 1555 2.05 LINK ND1 HIS S 17 ZN ZN S 281 1555 1555 2.13 LINK ND1 HIS S 39 ZN ZN S 280 1555 1555 2.01 LINK OD1 ASP S 41 ZN ZN S 280 1555 1555 2.26 LINK O ALA S 169 ZN ZN S 278 1555 1555 2.31 LINK O TYR S 171 ZN ZN S 278 1555 1555 2.39 LINK O VAL S 174 ZN ZN S 278 1555 1555 2.39 LINK ND1 HIS S 238 ZN ZN S 279 1555 1555 2.07 LINK OD2 ASP S 259 ZN ZN S 282 1555 1555 2.25 LINK ZN ZN S 278 O HOH S 319 1555 1555 2.47 LINK ZN ZN S 279 O HOH S 401 1555 1555 2.37 LINK ZN ZN S 281 O HOH S 339 1555 1555 2.18 LINK ZN ZN S 282 O HOH S 473 1555 1555 2.00 CISPEP 1 TYR S 167 PRO S 168 0 5.58 SITE 1 AC1 2 ALA S 169 TYR S 171 SITE 1 AC2 2 GLU P 27 HIS S 238 SITE 1 AC3 3 HIS S 39 PRO S 40 ASP S 41 SITE 1 AC4 1 HIS S 17 SITE 1 AC5 2 GLU P 32 ASP S 259 CRYST1 43.195 72.941 93.112 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023151 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013710 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010740 0.00000