HEADER PROTEIN BINDING 27-MAR-08 3CO1 TITLE CRYSTAL STRUCTURE OF MICROTUBULE BINDING DOMAIN OF HUMAN EB3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CH DOMAIN; COMPND 5 SYNONYM: END-BINDING PROTEIN 3, EB3, EB1 PROTEIN FAMILY MEMBER 3, COMPND 6 EBF3, RP3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 DE(3); SOURCE 8 OTHER_DETAILS: INVITROGEN GATEWAY KEYWDS RP/EB FAMILY, CH DOMAIN, MICROTUBULE-BINDING, +TIP PROTEIN, CELL KEYWDS 2 CYCLE, CELL DIVISION, MITOSIS, PHOSPHOPROTEIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.O.DE GROOT,S.HONNAPPA,M.O.STEINMETZ REVDAT 4 01-NOV-23 3CO1 1 SEQADV REVDAT 3 13-JUL-11 3CO1 1 VERSN REVDAT 2 19-JAN-10 3CO1 1 REMARK REVDAT 1 17-MAR-09 3CO1 0 JRNL AUTH Y.KOMAROVA,C.O.DE GROOT,I.GRIGORIEV,S.M.GOUVEIA, JRNL AUTH 2 E.L.MUNTEANU,J.M.SCHOBER,S.HONNAPPA,R.M.BUEY,C.C.HOOGENRAAD, JRNL AUTH 3 M.DOGTEROM,G.G.BORISY,M.O.STEINMETZ,A.AKHMANOVA JRNL TITL MAMMALIAN END BINDING PROTEINS CONTROL PERSISTENT JRNL TITL 2 MICROTUBULE GROWTH. JRNL REF J.CELL BIOL. 2009 JRNL REFN ESSN 1540-8140 JRNL PMID 19255245 JRNL DOI 10.1083/JCB.200807179 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 24229 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1296 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1651 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.29 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.2650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1083 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 151 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.57000 REMARK 3 B22 (A**2) : 0.62000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.073 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.076 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.015 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1124 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1514 ; 1.067 ; 1.932 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 135 ; 4.494 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;41.137 ;24.643 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 206 ;12.346 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ;11.078 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 158 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 850 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 538 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 786 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 107 ; 0.139 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 47 ; 0.154 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.136 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 673 ; 1.936 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1065 ; 2.698 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 506 ; 4.441 ; 4.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 447 ; 6.390 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 12 REMARK 3 ORIGIN FOR THE GROUP (A): -3.5804 20.4453 -1.2461 REMARK 3 T TENSOR REMARK 3 T11: 0.0528 T22: 0.0244 REMARK 3 T33: 0.0882 T12: -0.0269 REMARK 3 T13: -0.0106 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 3.0131 L22: 1.4947 REMARK 3 L33: 2.1750 L12: -0.1531 REMARK 3 L13: -0.0100 L23: 0.0797 REMARK 3 S TENSOR REMARK 3 S11: 0.0444 S12: -0.0542 S13: 0.2084 REMARK 3 S21: -0.0522 S22: -0.0165 S23: 0.0586 REMARK 3 S31: -0.0574 S32: -0.0362 S33: -0.0279 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 18 REMARK 3 ORIGIN FOR THE GROUP (A): -3.6689 1.0339 -1.2856 REMARK 3 T TENSOR REMARK 3 T11: 0.1286 T22: 0.0614 REMARK 3 T33: 0.0915 T12: 0.0193 REMARK 3 T13: 0.0002 T23: 0.0356 REMARK 3 L TENSOR REMARK 3 L11: 13.9040 L22: 22.5750 REMARK 3 L33: 1.8425 L12: 8.0488 REMARK 3 L13: 3.9126 L23: 3.9105 REMARK 3 S TENSOR REMARK 3 S11: 0.1982 S12: -0.1199 S13: -0.2822 REMARK 3 S21: 0.3633 S22: -0.0655 S23: -0.1687 REMARK 3 S31: 0.2656 S32: -0.0132 S33: -0.1328 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 36 REMARK 3 ORIGIN FOR THE GROUP (A): -14.4765 1.4105 -4.7855 REMARK 3 T TENSOR REMARK 3 T11: 0.0565 T22: -0.0043 REMARK 3 T33: 0.0626 T12: -0.0081 REMARK 3 T13: 0.0014 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 3.8175 L22: 3.4170 REMARK 3 L33: 3.0131 L12: 0.0599 REMARK 3 L13: -0.0452 L23: -0.5814 REMARK 3 S TENSOR REMARK 3 S11: -0.0257 S12: 0.1133 S13: -0.1219 REMARK 3 S21: -0.0071 S22: 0.0544 S23: -0.0545 REMARK 3 S31: 0.1069 S32: -0.0855 S33: -0.0287 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 56 REMARK 3 ORIGIN FOR THE GROUP (A): -17.1042 12.9572 -7.9309 REMARK 3 T TENSOR REMARK 3 T11: 0.0427 T22: 0.0092 REMARK 3 T33: 0.0272 T12: 0.0030 REMARK 3 T13: -0.0056 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.4429 L22: 2.9739 REMARK 3 L33: 1.5041 L12: -1.0855 REMARK 3 L13: -0.5060 L23: 1.3433 REMARK 3 S TENSOR REMARK 3 S11: 0.0354 S12: -0.0252 S13: -0.0348 REMARK 3 S21: -0.0716 S22: -0.0729 S23: 0.0676 REMARK 3 S31: 0.0391 S32: -0.0903 S33: 0.0374 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 57 A 64 REMARK 3 ORIGIN FOR THE GROUP (A): -24.6871 12.9974 -15.2186 REMARK 3 T TENSOR REMARK 3 T11: 0.0449 T22: 0.1092 REMARK 3 T33: 0.0433 T12: -0.0350 REMARK 3 T13: -0.0147 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 9.1566 L22: 16.5915 REMARK 3 L33: 5.3454 L12: -0.7339 REMARK 3 L13: -0.7700 L23: -0.4015 REMARK 3 S TENSOR REMARK 3 S11: -0.0371 S12: -0.0826 S13: 0.0411 REMARK 3 S21: -0.0018 S22: -0.1872 S23: -0.0733 REMARK 3 S31: 0.0510 S32: -0.4058 S33: 0.2244 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 65 A 75 REMARK 3 ORIGIN FOR THE GROUP (A): -17.1730 8.2391 -21.6999 REMARK 3 T TENSOR REMARK 3 T11: 0.0777 T22: 0.0024 REMARK 3 T33: 0.0159 T12: -0.0157 REMARK 3 T13: -0.0007 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 2.1287 L22: 4.0200 REMARK 3 L33: 8.2607 L12: -0.5964 REMARK 3 L13: -0.8879 L23: -0.4899 REMARK 3 S TENSOR REMARK 3 S11: -0.0598 S12: 0.1296 S13: -0.2834 REMARK 3 S21: -0.2081 S22: 0.0978 S23: 0.1227 REMARK 3 S31: 0.6380 S32: -0.1930 S33: -0.0380 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 76 A 81 REMARK 3 ORIGIN FOR THE GROUP (A): -14.9194 18.8306 -15.6205 REMARK 3 T TENSOR REMARK 3 T11: 0.0934 T22: 0.0263 REMARK 3 T33: 0.0192 T12: -0.0031 REMARK 3 T13: 0.0108 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 5.7150 L22: 7.6734 REMARK 3 L33: 13.4067 L12: 1.2145 REMARK 3 L13: 2.3160 L23: 6.0239 REMARK 3 S TENSOR REMARK 3 S11: -0.2007 S12: 0.2430 S13: 0.1305 REMARK 3 S21: -0.6090 S22: 0.0911 S23: -0.1283 REMARK 3 S31: -0.1586 S32: 0.3388 S33: 0.1096 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 82 A 91 REMARK 3 ORIGIN FOR THE GROUP (A): -9.4390 21.9488 -11.0851 REMARK 3 T TENSOR REMARK 3 T11: 0.0599 T22: 0.0086 REMARK 3 T33: 0.0545 T12: -0.0169 REMARK 3 T13: 0.0132 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 5.8272 L22: 5.6111 REMARK 3 L33: 3.9405 L12: 0.8135 REMARK 3 L13: -0.5869 L23: 1.8393 REMARK 3 S TENSOR REMARK 3 S11: -0.0670 S12: 0.0871 S13: -0.0358 REMARK 3 S21: -0.2659 S22: 0.0188 S23: -0.1432 REMARK 3 S31: -0.1491 S32: 0.1100 S33: 0.0482 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 92 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): -6.7870 9.0369 -20.6638 REMARK 3 T TENSOR REMARK 3 T11: 0.0382 T22: 0.0269 REMARK 3 T33: 0.0216 T12: 0.0284 REMARK 3 T13: 0.0524 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 10.4714 L22: 13.8169 REMARK 3 L33: 9.1501 L12: -1.1354 REMARK 3 L13: 0.7254 L23: 4.3672 REMARK 3 S TENSOR REMARK 3 S11: 0.0596 S12: 0.6972 S13: 0.2385 REMARK 3 S21: -0.4872 S22: -0.0647 S23: -0.5146 REMARK 3 S31: 0.0733 S32: 0.4619 S33: 0.0051 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): -2.5608 4.1633 -13.6876 REMARK 3 T TENSOR REMARK 3 T11: 0.0450 T22: 0.0487 REMARK 3 T33: 0.0915 T12: 0.0627 REMARK 3 T13: 0.0227 T23: -0.0387 REMARK 3 L TENSOR REMARK 3 L11: 12.7885 L22: 15.1577 REMARK 3 L33: 1.3010 L12: -1.1306 REMARK 3 L13: 0.8898 L23: 0.2203 REMARK 3 S TENSOR REMARK 3 S11: 0.2347 S12: 0.6737 S13: -0.6327 REMARK 3 S21: -0.6002 S22: -0.1648 S23: -0.7331 REMARK 3 S31: 0.2399 S32: 0.3908 S33: -0.0699 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 122 REMARK 3 ORIGIN FOR THE GROUP (A): -9.7298 13.5459 -1.7207 REMARK 3 T TENSOR REMARK 3 T11: 0.0271 T22: 0.0086 REMARK 3 T33: 0.0565 T12: -0.0040 REMARK 3 T13: -0.0016 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 2.5594 L22: 0.8594 REMARK 3 L33: 1.5196 L12: -1.2057 REMARK 3 L13: -0.2741 L23: 0.3776 REMARK 3 S TENSOR REMARK 3 S11: 0.0191 S12: -0.1497 S13: -0.0390 REMARK 3 S21: 0.0596 S22: -0.0117 S23: -0.0540 REMARK 3 S31: 0.0715 S32: -0.0433 S33: -0.0074 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 123 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): -26.9714 10.2364 -3.4560 REMARK 3 T TENSOR REMARK 3 T11: 0.0004 T22: 0.0327 REMARK 3 T33: 0.0540 T12: -0.0023 REMARK 3 T13: 0.0257 T23: 0.0337 REMARK 3 L TENSOR REMARK 3 L11: 2.9928 L22: 13.1581 REMARK 3 L33: 27.3543 L12: 3.0507 REMARK 3 L13: -1.5660 L23: 8.0273 REMARK 3 S TENSOR REMARK 3 S11: -0.0481 S12: -0.0010 S13: -0.3755 REMARK 3 S21: -0.4207 S22: -0.1933 S23: -0.4179 REMARK 3 S31: -0.0031 S32: 0.3747 S33: 0.2414 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CO1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047007. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0090 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25525 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10700 REMARK 200 FOR THE DATA SET : 10.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1PA7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.04M POTASSIUM PHOSPHATE, 16% PEG REMARK 280 8000, 20% GLYCEROL ANHYDROUS, PH 7.4, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 23.59400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.68250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.59400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.68250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 12 CA CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 94 CD GLU A 94 OE1 -0.093 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PA7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF AMINO-TERMINAL MICROTUBULE BINDING DOMAIN OF REMARK 900 EB1 REMARK 900 RELATED ID: 1WYO RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF THE CH DOMAIN OF HUMAN MICROTUBULE-ASSOCIATED REMARK 900 PROTEIN RP/EB FAMILY MEMBER 3 DBREF 3CO1 A 1 130 UNP Q9UPY8 MARE3_HUMAN 1 130 SEQADV 3CO1 GLY A -1 UNP Q9UPY8 EXPRESSION TAG SEQADV 3CO1 SER A 0 UNP Q9UPY8 EXPRESSION TAG SEQRES 1 A 132 GLY SER MET ALA VAL ASN VAL TYR SER THR SER VAL THR SEQRES 2 A 132 SER GLU ASN LEU SER ARG HIS ASP MET LEU ALA TRP VAL SEQRES 3 A 132 ASN ASP SER LEU HIS LEU ASN TYR THR LYS ILE GLU GLN SEQRES 4 A 132 LEU CYS SER GLY ALA ALA TYR CYS GLN PHE MET ASP MET SEQRES 5 A 132 LEU PHE PRO GLY CYS VAL HIS LEU ARG LYS VAL LYS PHE SEQRES 6 A 132 GLN ALA LYS LEU GLU HIS GLU TYR ILE HIS ASN PHE LYS SEQRES 7 A 132 VAL LEU GLN ALA ALA PHE LYS LYS MET GLY VAL ASP LYS SEQRES 8 A 132 ILE ILE PRO VAL GLU LYS LEU VAL LYS GLY LYS PHE GLN SEQRES 9 A 132 ASP ASN PHE GLU PHE ILE GLN TRP PHE LYS LYS PHE PHE SEQRES 10 A 132 ASP ALA ASN TYR ASP GLY LYS ASP TYR ASN PRO LEU LEU SEQRES 11 A 132 ALA ARG FORMUL 2 HOH *151(H2 O) HELIX 1 1 SER A 16 HIS A 29 1 14 HELIX 2 2 LYS A 34 SER A 40 5 7 HELIX 3 3 GLY A 41 PHE A 52 1 12 HELIX 4 4 HIS A 57 VAL A 61 5 5 HELIX 5 5 LEU A 67 GLY A 86 1 20 HELIX 6 6 PRO A 92 LYS A 98 1 7 HELIX 7 7 LYS A 100 TYR A 119 1 20 CRYST1 47.188 85.365 32.161 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021192 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011714 0.000000 0.00000 SCALE3 0.000000 0.000000 0.031094 0.00000