HEADER ISOMERASE 27-MAR-08 3CO8 TITLE CRYSTAL STRUCTURE OF ALANINE RACEMASE FROM OENOCOCCUS OENI COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALANINE RACEMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.1.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OENOCOCCUS OENI; SOURCE 3 ORGANISM_TAXID: 203123; SOURCE 4 STRAIN: PSU-1; SOURCE 5 ATCC: BAA-331; SOURCE 6 GENE: OEOE_0162; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: BC-PSGX(BC) KEYWDS ALANINE RACEMASE, PROTEIN STRUCTURE INITIATIVE II, PSI-II, NYSGXRC, KEYWDS 2 11082I, PLP, TIM BARREL, STRUCTURAL GENOMICS, NEW YORK SGX RESEARCH KEYWDS 3 CENTER FOR STRUCTURAL GENOMICS, ISOMERASE, PYRIDOXAL PHOSPHATE EXPDTA X-RAY DIFFRACTION AUTHOR K.PALANI,S.K.BURLEY,S.SWAMINATHAN,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 8 03-FEB-21 3CO8 1 AUTHOR JRNL REMARK SEQADV REVDAT 8 2 1 LINK REVDAT 7 06-FEB-13 3CO8 1 JRNL REVDAT 6 09-JAN-13 3CO8 1 JRNL REVDAT 5 13-JUL-11 3CO8 1 VERSN REVDAT 4 09-JUN-09 3CO8 1 REVDAT REVDAT 3 24-FEB-09 3CO8 1 VERSN REVDAT 2 23-DEC-08 3CO8 1 AUTHOR KEYWDS REVDAT 1 08-APR-08 3CO8 0 JRNL AUTH K.PALANI,S.K.BURLEY,S.SWAMINATHAN JRNL TITL STRUCTURE OF ALANINE RACEMASE FROM OENOCOCCUS OENI WITH JRNL TITL 2 BOUND PYRIDOXAL 5'-PHOSPHATE. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 69 15 2013 JRNL REFN ESSN 1744-3091 JRNL PMID 23295479 JRNL DOI 10.1107/S1744309112047276 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 197480.700 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 80948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4092 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 11468 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 615 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5548 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 626 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.38000 REMARK 3 B22 (A**2) : 2.49000 REMARK 3 B33 (A**2) : -2.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.80000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.15 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.18 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.480 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 10.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN.PARAM REMARK 3 PARAMETER FILE 2 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES LISTED AS MISSING IN REMARK REMARK 3 465 ARE DUE TO LACK OF ELECTRON DENSITY. RESIDUES WITH MISSING REMARK 3 ATOMS LISTED IN REMARK 470 ARE DUE TO LACK OF ELECTRON DENSITY REMARK 3 FOR SIDE CHAINS AND MODELED AS ALANINES. REMARK 4 REMARK 4 3CO8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047014. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : SI(III) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 80948 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.23000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM CHLORIDE, 0.1M BIS-TRIS, REMARK 280 25% PEG 3350, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.81950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 0 REMARK 465 SER A 1 REMARK 465 SER A 169 REMARK 465 SER A 170 REMARK 465 ASP A 171 REMARK 465 ASN A 172 REMARK 465 PRO A 173 REMARK 465 ASP A 174 REMARK 465 ASP A 175 REMARK 465 HIS A 176 REMARK 465 TYR A 177 REMARK 465 ASP A 371 REMARK 465 GLU A 372 REMARK 465 GLY A 373 REMARK 465 HIS A 374 REMARK 465 HIS A 375 REMARK 465 HIS A 376 REMARK 465 HIS A 377 REMARK 465 HIS A 378 REMARK 465 HIS A 379 REMARK 465 MSE B 0 REMARK 465 SER B 1 REMARK 465 LEU B 2 REMARK 465 GLU B 3 REMARK 465 ALA B 4 REMARK 465 ILE B 5 REMARK 465 HIS B 6 REMARK 465 ILE B 258 REMARK 465 PRO B 259 REMARK 465 ALA B 260 REMARK 465 GLY B 261 REMARK 465 GLU B 262 REMARK 465 GLY B 263 REMARK 465 ILE B 264 REMARK 465 SER B 265 REMARK 465 TYR B 266 REMARK 465 GLY B 267 REMARK 465 SER B 268 REMARK 465 LYS B 269 REMARK 465 PHE B 270 REMARK 465 VAL B 271 REMARK 465 THR B 272 REMARK 465 SER B 273 REMARK 465 ARG B 274 REMARK 465 ASP B 275 REMARK 465 THR B 276 REMARK 465 ASP B 371 REMARK 465 GLU B 372 REMARK 465 GLY B 373 REMARK 465 HIS B 374 REMARK 465 HIS B 375 REMARK 465 HIS B 376 REMARK 465 HIS B 377 REMARK 465 HIS B 378 REMARK 465 HIS B 379 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 448 O HOH A 715 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 118 N - CA - C ANGL. DEV. = 16.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 200 -19.26 -142.44 REMARK 500 LEU A 213 60.05 -118.81 REMARK 500 SER A 265 -171.80 67.79 REMARK 500 ASP A 295 4.39 80.08 REMARK 500 SER A 336 112.74 -161.48 REMARK 500 ARG B 135 -75.48 -104.26 REMARK 500 SER B 169 51.77 -153.55 REMARK 500 VAL B 200 -20.10 -142.91 REMARK 500 CYS B 216 32.56 -141.32 REMARK 500 ASP B 295 4.53 83.97 REMARK 500 ASP B 314 16.16 -141.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11082I RELATED DB: TARGETDB DBREF 3CO8 A 3 371 UNP Q04HB7 Q04HB7_OENOB 3 371 DBREF 3CO8 B 3 371 UNP Q04HB7 Q04HB7_OENOB 3 371 SEQADV 3CO8 MSE A 0 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 SER A 1 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 LEU A 2 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 GLU A 372 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 GLY A 373 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS A 374 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS A 375 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS A 376 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS A 377 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS A 378 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS A 379 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 MSE B 0 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 SER B 1 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 LEU B 2 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 GLU B 372 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 GLY B 373 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS B 374 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS B 375 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS B 376 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS B 377 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS B 378 UNP Q04HB7 EXPRESSION TAG SEQADV 3CO8 HIS B 379 UNP Q04HB7 EXPRESSION TAG SEQRES 1 A 380 MSE SER LEU GLU ALA ILE HIS ARG SER THR ARG ILE GLU SEQRES 2 A 380 PHE SER LYS SER SER LEU ALA TYR ASN VAL GLN TYR THR SEQRES 3 A 380 LYS GLN VAL SER GLY ALA LYS THR LEU TRP LEU ALA VAL SEQRES 4 A 380 LYS SER ASN ALA TYR GLY HIS GLY LEU LEU GLN VAL SER SEQRES 5 A 380 LYS ILE ALA ARG GLU CYS GLY VAL ASP GLY LEU ALA VAL SEQRES 6 A 380 SER VAL LEU ASP GLU GLY ILE ALA ILE ARG GLN ALA GLY SEQRES 7 A 380 ILE ASP ASP PHE ILE LEU ILE LEU GLY PRO ILE ASP VAL SEQRES 8 A 380 LYS TYR ALA PRO ILE ALA SER LYS TYR HIS PHE LEU THR SEQRES 9 A 380 THR VAL SER SER LEU ASP TRP LEU LYS SER ALA ASP LYS SEQRES 10 A 380 ILE LEU GLY LYS GLU LYS LEU SER VAL ASN LEU ALA VAL SEQRES 11 A 380 ASP THR GLY MSE ASN ARG ILE GLY VAL ARG SER LYS LYS SEQRES 12 A 380 ASP LEU LYS ASP GLU ILE GLU PHE LEU GLN GLU HIS SER SEQRES 13 A 380 ASP HIS PHE SER TYR ASP GLY ILE PHE THR HIS PHE ALA SEQRES 14 A 380 SER SER ASP ASN PRO ASP ASP HIS TYR PHE GLN ARG GLN SEQRES 15 A 380 LYS ASN ARG TRP TYR GLU LEU ILE ASP GLY LEU ILE MSE SEQRES 16 A 380 PRO ARG TYR VAL HIS VAL MSE ASN SER GLY ALA ALA MSE SEQRES 17 A 380 TYR HIS SER LYS GLU LEU PRO GLY CYS ASN SER ILE ALA SEQRES 18 A 380 ARG VAL GLY THR VAL VAL TYR GLY VAL GLU PRO SER GLU SEQRES 19 A 380 GLY VAL LEU GLY PRO ILE ASP LYS LEU LYS PRO VAL PHE SEQRES 20 A 380 GLU LEU LYS SER ALA LEU THR PHE VAL LYS LYS ILE PRO SEQRES 21 A 380 ALA GLY GLU GLY ILE SER TYR GLY SER LYS PHE VAL THR SEQRES 22 A 380 SER ARG ASP THR TRP ILE GLY THR LEU PRO ILE GLY TYR SEQRES 23 A 380 GLY ASP GLY TRP LEU ALA GLU TYR GLN ASP PHE GLN LEU SEQRES 24 A 380 LEU ILE ASP GLY GLN LYS CYS ARG GLN VAL GLY GLN ILE SEQRES 25 A 380 ALA MSE ASP GLN MSE MSE VAL ALA LEU PRO HIS GLU TYR SEQRES 26 A 380 PRO ILE GLY THR GLU VAL THR LEU ILE GLY LYS SER GLY SEQRES 27 A 380 LYS TYR GLU ASN THR LEU TYR ASP LEU HIS LYS HIS SER SEQRES 28 A 380 GLY VAL PRO PRO TRP LYS ILE THR VAL ALA PHE SER ASP SEQRES 29 A 380 ARG LEU LYS ARG MSE VAL VAL ASP GLU GLY HIS HIS HIS SEQRES 30 A 380 HIS HIS HIS SEQRES 1 B 380 MSE SER LEU GLU ALA ILE HIS ARG SER THR ARG ILE GLU SEQRES 2 B 380 PHE SER LYS SER SER LEU ALA TYR ASN VAL GLN TYR THR SEQRES 3 B 380 LYS GLN VAL SER GLY ALA LYS THR LEU TRP LEU ALA VAL SEQRES 4 B 380 LYS SER ASN ALA TYR GLY HIS GLY LEU LEU GLN VAL SER SEQRES 5 B 380 LYS ILE ALA ARG GLU CYS GLY VAL ASP GLY LEU ALA VAL SEQRES 6 B 380 SER VAL LEU ASP GLU GLY ILE ALA ILE ARG GLN ALA GLY SEQRES 7 B 380 ILE ASP ASP PHE ILE LEU ILE LEU GLY PRO ILE ASP VAL SEQRES 8 B 380 LYS TYR ALA PRO ILE ALA SER LYS TYR HIS PHE LEU THR SEQRES 9 B 380 THR VAL SER SER LEU ASP TRP LEU LYS SER ALA ASP LYS SEQRES 10 B 380 ILE LEU GLY LYS GLU LYS LEU SER VAL ASN LEU ALA VAL SEQRES 11 B 380 ASP THR GLY MSE ASN ARG ILE GLY VAL ARG SER LYS LYS SEQRES 12 B 380 ASP LEU LYS ASP GLU ILE GLU PHE LEU GLN GLU HIS SER SEQRES 13 B 380 ASP HIS PHE SER TYR ASP GLY ILE PHE THR HIS PHE ALA SEQRES 14 B 380 SER SER ASP ASN PRO ASP ASP HIS TYR PHE GLN ARG GLN SEQRES 15 B 380 LYS ASN ARG TRP TYR GLU LEU ILE ASP GLY LEU ILE MSE SEQRES 16 B 380 PRO ARG TYR VAL HIS VAL MSE ASN SER GLY ALA ALA MSE SEQRES 17 B 380 TYR HIS SER LYS GLU LEU PRO GLY CYS ASN SER ILE ALA SEQRES 18 B 380 ARG VAL GLY THR VAL VAL TYR GLY VAL GLU PRO SER GLU SEQRES 19 B 380 GLY VAL LEU GLY PRO ILE ASP LYS LEU LYS PRO VAL PHE SEQRES 20 B 380 GLU LEU LYS SER ALA LEU THR PHE VAL LYS LYS ILE PRO SEQRES 21 B 380 ALA GLY GLU GLY ILE SER TYR GLY SER LYS PHE VAL THR SEQRES 22 B 380 SER ARG ASP THR TRP ILE GLY THR LEU PRO ILE GLY TYR SEQRES 23 B 380 GLY ASP GLY TRP LEU ALA GLU TYR GLN ASP PHE GLN LEU SEQRES 24 B 380 LEU ILE ASP GLY GLN LYS CYS ARG GLN VAL GLY GLN ILE SEQRES 25 B 380 ALA MSE ASP GLN MSE MSE VAL ALA LEU PRO HIS GLU TYR SEQRES 26 B 380 PRO ILE GLY THR GLU VAL THR LEU ILE GLY LYS SER GLY SEQRES 27 B 380 LYS TYR GLU ASN THR LEU TYR ASP LEU HIS LYS HIS SER SEQRES 28 B 380 GLY VAL PRO PRO TRP LYS ILE THR VAL ALA PHE SER ASP SEQRES 29 B 380 ARG LEU LYS ARG MSE VAL VAL ASP GLU GLY HIS HIS HIS SEQRES 30 B 380 HIS HIS HIS MODRES 3CO8 MSE A 133 MET SELENOMETHIONINE MODRES 3CO8 MSE A 194 MET SELENOMETHIONINE MODRES 3CO8 MSE A 201 MET SELENOMETHIONINE MODRES 3CO8 MSE A 207 MET SELENOMETHIONINE MODRES 3CO8 MSE A 313 MET SELENOMETHIONINE MODRES 3CO8 MSE A 316 MET SELENOMETHIONINE MODRES 3CO8 MSE A 317 MET SELENOMETHIONINE MODRES 3CO8 MSE A 368 MET SELENOMETHIONINE MODRES 3CO8 MSE B 133 MET SELENOMETHIONINE MODRES 3CO8 MSE B 194 MET SELENOMETHIONINE MODRES 3CO8 MSE B 201 MET SELENOMETHIONINE MODRES 3CO8 MSE B 207 MET SELENOMETHIONINE MODRES 3CO8 MSE B 313 MET SELENOMETHIONINE MODRES 3CO8 MSE B 316 MET SELENOMETHIONINE MODRES 3CO8 MSE B 317 MET SELENOMETHIONINE MODRES 3CO8 MSE B 368 MET SELENOMETHIONINE HET MSE A 133 8 HET MSE A 194 8 HET MSE A 201 8 HET MSE A 207 8 HET MSE A 313 8 HET MSE A 316 8 HET MSE A 317 8 HET MSE A 368 8 HET MSE B 133 8 HET MSE B 194 8 HET MSE B 201 8 HET MSE B 207 8 HET MSE B 313 8 HET MSE B 316 8 HET MSE B 317 8 HET MSE B 368 8 HET PLP A 401 15 HET PLP B 401 15 HETNAM MSE SELENOMETHIONINE HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 3 PLP 2(C8 H10 N O6 P) FORMUL 5 HOH *626(H2 O) HELIX 1 1 LYS A 15 GLY A 30 1 16 HELIX 2 2 VAL A 38 GLY A 44 1 7 HELIX 3 3 GLY A 46 ARG A 55 1 10 HELIX 4 4 GLU A 56 GLY A 58 5 3 HELIX 5 5 VAL A 66 ALA A 76 1 11 HELIX 6 6 ASP A 89 LYS A 91 5 3 HELIX 7 7 TYR A 92 TYR A 99 1 8 HELIX 8 8 SER A 107 LEU A 118 1 12 HELIX 9 9 SER A 140 HIS A 154 1 15 HELIX 10 10 PHE A 178 ASP A 190 1 13 HELIX 11 11 ASN A 202 HIS A 209 1 8 HELIX 12 12 SER A 210 LEU A 213 5 4 HELIX 13 13 PRO A 238 LEU A 242 5 5 HELIX 14 14 SER A 265 LYS A 269 5 5 HELIX 15 15 GLY A 284 GLY A 288 5 5 HELIX 16 16 LEU A 290 GLN A 294 5 5 HELIX 17 17 THR A 342 GLY A 351 1 10 HELIX 18 18 PRO A 353 ALA A 360 1 8 HELIX 19 19 LYS B 15 GLY B 30 1 16 HELIX 20 20 VAL B 38 GLY B 44 1 7 HELIX 21 21 GLY B 46 ALA B 54 1 9 HELIX 22 22 VAL B 66 ALA B 76 1 11 HELIX 23 23 ASP B 89 LYS B 91 5 3 HELIX 24 24 TYR B 92 TYR B 99 1 8 HELIX 25 25 SER B 107 LYS B 116 1 10 HELIX 26 26 SER B 140 HIS B 154 1 15 HELIX 27 27 ASP B 175 ASP B 190 1 16 HELIX 28 28 ASN B 202 HIS B 209 1 8 HELIX 29 29 SER B 210 LEU B 213 5 4 HELIX 30 30 GLY B 284 GLY B 288 5 5 HELIX 31 31 LEU B 290 GLN B 294 5 5 HELIX 32 32 THR B 342 GLY B 351 1 10 HELIX 33 33 PRO B 353 ALA B 360 1 8 SHEET 1 A 5 TYR A 339 ASN A 341 0 SHEET 2 A 5 GLU A 329 SER A 336 -1 N GLY A 334 O ASN A 341 SHEET 3 A 5 PHE A 246 ALA A 251 -1 N LEU A 248 O LEU A 332 SHEET 4 A 5 ARG A 10 SER A 14 -1 N GLU A 12 O GLU A 247 SHEET 5 A 5 LYS A 366 VAL A 370 1 O VAL A 370 N PHE A 13 SHEET 1 B 8 TYR A 197 HIS A 199 0 SHEET 2 B 8 PHE A 158 PHE A 164 1 N ASP A 161 O TYR A 197 SHEET 3 B 8 LEU A 123 ALA A 128 1 N VAL A 125 O SER A 159 SHEET 4 B 8 LEU A 102 VAL A 105 1 N THR A 103 O SER A 124 SHEET 5 B 8 ILE A 82 ILE A 84 1 N ILE A 82 O LEU A 102 SHEET 6 B 8 GLY A 61 VAL A 64 1 N VAL A 64 O LEU A 83 SHEET 7 B 8 THR A 33 ALA A 37 1 N LEU A 36 O ALA A 63 SHEET 8 B 8 ILE A 219 VAL A 222 1 O ALA A 220 N TRP A 35 SHEET 1 C 5 PHE A 254 ILE A 258 0 SHEET 2 C 5 THR A 276 LEU A 281 -1 O ILE A 278 N LYS A 256 SHEET 3 C 5 MSE A 316 LEU A 320 -1 O MSE A 316 N LEU A 281 SHEET 4 C 5 GLN A 303 VAL A 308 -1 N ARG A 306 O ALA A 319 SHEET 5 C 5 GLN A 297 ILE A 300 -1 N LEU A 298 O CYS A 305 SHEET 1 D 2 GLY A 263 ILE A 264 0 SHEET 2 D 2 PHE A 270 VAL A 271 -1 O PHE A 270 N ILE A 264 SHEET 1 E 5 TYR B 339 ASN B 341 0 SHEET 2 E 5 GLU B 329 SER B 336 -1 N GLY B 334 O ASN B 341 SHEET 3 E 5 PHE B 246 ALA B 251 -1 N LEU B 248 O LEU B 332 SHEET 4 E 5 ARG B 10 SER B 14 -1 N ARG B 10 O LYS B 249 SHEET 5 E 5 LYS B 366 VAL B 370 1 O VAL B 370 N PHE B 13 SHEET 1 F 8 TYR B 197 HIS B 199 0 SHEET 2 F 8 PHE B 158 PHE B 164 1 N ILE B 163 O HIS B 199 SHEET 3 F 8 LEU B 123 ALA B 128 1 N VAL B 125 O SER B 159 SHEET 4 F 8 PHE B 101 VAL B 105 1 N THR B 103 O SER B 124 SHEET 5 F 8 ILE B 82 ILE B 84 1 N ILE B 82 O LEU B 102 SHEET 6 F 8 GLY B 61 VAL B 64 1 N VAL B 64 O LEU B 83 SHEET 7 F 8 THR B 33 ALA B 37 1 N LEU B 36 O ALA B 63 SHEET 8 F 8 ILE B 219 VAL B 222 1 O ALA B 220 N TRP B 35 SHEET 1 G 4 PHE B 254 LYS B 256 0 SHEET 2 G 4 ILE B 278 LEU B 281 -1 O THR B 280 N PHE B 254 SHEET 3 G 4 MSE B 316 ALA B 319 -1 O VAL B 318 N GLY B 279 SHEET 4 G 4 GLN B 307 VAL B 308 -1 N VAL B 308 O MSE B 317 SHEET 1 H 2 LEU B 298 ILE B 300 0 SHEET 2 H 2 GLN B 303 CYS B 305 -1 O CYS B 305 N LEU B 298 LINK NZ LYS A 39 C4A PLP A 401 1555 1555 1.34 LINK C GLY A 132 N MSE A 133 1555 1555 1.33 LINK C MSE A 133 N ASN A 134 1555 1555 1.34 LINK C ILE A 193 N MSE A 194 1555 1555 1.33 LINK C MSE A 194 N PRO A 195 1555 1555 1.35 LINK C VAL A 200 N MSE A 201 1555 1555 1.33 LINK C MSE A 201 N ASN A 202 1555 1555 1.34 LINK C ALA A 206 N MSE A 207 1555 1555 1.33 LINK C MSE A 207 N TYR A 208 1555 1555 1.34 LINK C ALA A 312 N MSE A 313 1555 1555 1.33 LINK C MSE A 313 N ASP A 314 1555 1555 1.33 LINK C GLN A 315 N MSE A 316 1555 1555 1.33 LINK C MSE A 316 N MSE A 317 1555 1555 1.33 LINK C MSE A 317 N VAL A 318 1555 1555 1.33 LINK C ARG A 367 N MSE A 368 1555 1555 1.33 LINK C MSE A 368 N VAL A 369 1555 1555 1.33 LINK NZ LYS B 39 C4A PLP B 401 1555 1555 1.35 LINK C GLY B 132 N MSE B 133 1555 1555 1.34 LINK C MSE B 133 N ASN B 134 1555 1555 1.34 LINK C ILE B 193 N MSE B 194 1555 1555 1.33 LINK C MSE B 194 N PRO B 195 1555 1555 1.35 LINK C VAL B 200 N MSE B 201 1555 1555 1.33 LINK C MSE B 201 N ASN B 202 1555 1555 1.34 LINK C ALA B 206 N MSE B 207 1555 1555 1.33 LINK C MSE B 207 N TYR B 208 1555 1555 1.33 LINK C ALA B 312 N MSE B 313 1555 1555 1.33 LINK C MSE B 313 N ASP B 314 1555 1555 1.33 LINK C GLN B 315 N MSE B 316 1555 1555 1.33 LINK C MSE B 316 N MSE B 317 1555 1555 1.33 LINK C MSE B 317 N VAL B 318 1555 1555 1.33 LINK C ARG B 367 N MSE B 368 1555 1555 1.33 LINK C MSE B 368 N VAL B 369 1555 1555 1.33 SITE 1 AC1 8 LYS A 39 TYR A 43 LEU A 85 HIS A 166 SITE 2 AC1 8 SER A 203 ARG A 221 GLY A 223 THR A 224 SITE 1 AC2 8 LYS B 39 TYR B 43 ARG B 135 HIS B 166 SITE 2 AC2 8 SER B 203 ARG B 221 GLY B 223 THR B 224 CRYST1 47.397 99.639 84.670 90.00 103.26 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021098 0.000000 0.004972 0.00000 SCALE2 0.000000 0.010036 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012134 0.00000