HEADER TRANSCRIPTION REGULATOR 28-MAR-08 3COL TITLE CRYSTAL STRUCTURE OF PUTATIVE TRANSCRIPTION REGULATOR FROM TITLE 2 LACTOBACILLUS PLANTARUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE TRANSCRIPTION REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS PLANTARUM WCFS1; SOURCE 3 ORGANISM_TAXID: 220668; SOURCE 4 STRAIN: WCFS1 / NCIMB 8826; SOURCE 5 ATCC: BAA-793; SOURCE 6 GENE: LP_3090; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS TRANSCRIPTION REGULATOR, LACTOBACILLUS PLANTARUM, STRUCTURAL KEYWDS 2 GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, MCSG, DNA-BINDING, TRANSCRIPTION REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,L.BIGELOW,L.FREEMAN,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 4 13-NOV-24 3COL 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 3COL 1 VERSN REVDAT 2 24-FEB-09 3COL 1 VERSN REVDAT 1 08-APR-08 3COL 0 JRNL AUTH C.CHANG,L.BIGELOW,L.FREEMAN,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE TRANSCRIPTION REGULATOR FROM JRNL TITL 2 LACTOBACILLUS PLANTARUM. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 24182 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1234 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1599 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.1830 REMARK 3 BIN FREE R VALUE SET COUNT : 86 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2713 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 302 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 23.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.71000 REMARK 3 B22 (A**2) : 0.38000 REMARK 3 B33 (A**2) : 0.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.217 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.131 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.321 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2876 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3923 ; 1.353 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 376 ; 5.222 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 122 ;38.846 ;24.754 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 503 ;16.915 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;12.106 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 477 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2141 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1540 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2117 ; 0.296 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 252 ; 0.179 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 46 ; 0.223 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.241 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1890 ; 0.832 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2985 ; 1.396 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1112 ; 2.349 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 937 ; 3.476 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 55 REMARK 3 ORIGIN FOR THE GROUP (A): 46.4517 46.8968 23.5463 REMARK 3 T TENSOR REMARK 3 T11: -0.0963 T22: -0.1676 REMARK 3 T33: -0.1551 T12: 0.0096 REMARK 3 T13: 0.0185 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 5.5881 L22: 4.2656 REMARK 3 L33: 7.2270 L12: -2.0277 REMARK 3 L13: 0.3119 L23: -0.6404 REMARK 3 S TENSOR REMARK 3 S11: -0.1579 S12: 0.0273 S13: -0.2252 REMARK 3 S21: 0.1094 S22: 0.0834 S23: -0.0325 REMARK 3 S31: 0.2706 S32: 0.3117 S33: 0.0745 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 56 A 143 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5536 55.5942 34.6643 REMARK 3 T TENSOR REMARK 3 T11: -0.0514 T22: -0.0508 REMARK 3 T33: -0.0814 T12: -0.0558 REMARK 3 T13: -0.0166 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 3.5546 L22: 0.6528 REMARK 3 L33: 0.9701 L12: -0.7943 REMARK 3 L13: -1.3883 L23: -0.0353 REMARK 3 S TENSOR REMARK 3 S11: -0.1072 S12: 0.4117 S13: -0.0638 REMARK 3 S21: -0.0965 S22: 0.1097 S23: 0.0636 REMARK 3 S31: 0.2326 S32: -0.2070 S33: -0.0025 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 144 A 193 REMARK 3 ORIGIN FOR THE GROUP (A): 27.7269 59.6739 47.0208 REMARK 3 T TENSOR REMARK 3 T11: -0.0231 T22: -0.0305 REMARK 3 T33: -0.0180 T12: -0.0056 REMARK 3 T13: 0.0011 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 2.7418 L22: 2.9914 REMARK 3 L33: 1.8843 L12: -1.2009 REMARK 3 L13: 0.1972 L23: -1.7624 REMARK 3 S TENSOR REMARK 3 S11: -0.0348 S12: -0.0673 S13: -0.0170 REMARK 3 S21: -0.0786 S22: 0.0764 S23: 0.0630 REMARK 3 S31: 0.0980 S32: 0.0340 S33: -0.0416 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 8 B 55 REMARK 3 ORIGIN FOR THE GROUP (A): 60.0857 66.4404 36.7953 REMARK 3 T TENSOR REMARK 3 T11: -0.1286 T22: -0.0464 REMARK 3 T33: 0.2712 T12: 0.0447 REMARK 3 T13: 0.0173 T23: -0.1616 REMARK 3 L TENSOR REMARK 3 L11: 17.6097 L22: 12.5334 REMARK 3 L33: 4.3500 L12: 5.2369 REMARK 3 L13: 4.3428 L23: -1.9260 REMARK 3 S TENSOR REMARK 3 S11: 0.4259 S12: -0.0603 S13: -0.6754 REMARK 3 S21: 0.0278 S22: -0.2957 S23: -1.3537 REMARK 3 S31: 0.1457 S32: 0.6252 S33: -0.1302 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 56 B 143 REMARK 3 ORIGIN FOR THE GROUP (A): 41.3410 73.4831 52.2784 REMARK 3 T TENSOR REMARK 3 T11: -0.0896 T22: -0.0589 REMARK 3 T33: -0.0854 T12: -0.0059 REMARK 3 T13: -0.0564 T23: -0.0327 REMARK 3 L TENSOR REMARK 3 L11: 2.7315 L22: 0.8424 REMARK 3 L33: 2.8750 L12: 0.8448 REMARK 3 L13: -1.9192 L23: 0.1674 REMARK 3 S TENSOR REMARK 3 S11: 0.0939 S12: -0.3699 S13: 0.0689 REMARK 3 S21: 0.3047 S22: 0.0319 S23: -0.1340 REMARK 3 S31: 0.0471 S32: 0.2682 S33: -0.1258 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 144 B 193 REMARK 3 ORIGIN FOR THE GROUP (A): 30.1382 71.6664 45.4424 REMARK 3 T TENSOR REMARK 3 T11: -0.0683 T22: -0.0546 REMARK 3 T33: -0.0116 T12: -0.0139 REMARK 3 T13: 0.0265 T23: -0.0203 REMARK 3 L TENSOR REMARK 3 L11: 1.8514 L22: 2.7081 REMARK 3 L33: 3.7750 L12: -0.3131 REMARK 3 L13: 0.2001 L23: -1.8303 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: 0.0340 S13: 0.1481 REMARK 3 S21: 0.1338 S22: 0.0174 S23: -0.0611 REMARK 3 S31: -0.1295 S32: -0.0094 S33: -0.0194 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3COL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047027. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24247 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : 0.44400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % PEG 3000, 100 MM NA CITRATE PH REMARK 280 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.10650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.70200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.46800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.70200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.10650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.46800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 LYS A 4 REMARK 465 ASP A 5 REMARK 465 MSE A 6 REMARK 465 GLY A 117 REMARK 465 MSE A 118 REMARK 465 THR A 119 REMARK 465 ILE A 120 REMARK 465 SER A 121 REMARK 465 ALA A 122 REMARK 465 ALA A 123 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 LYS B 4 REMARK 465 ASP B 5 REMARK 465 MSE B 6 REMARK 465 ASN B 7 REMARK 465 GLY B 115 REMARK 465 GLN B 116 REMARK 465 GLY B 117 REMARK 465 MSE B 118 REMARK 465 THR B 119 REMARK 465 ILE B 120 REMARK 465 SER B 121 REMARK 465 ALA B 122 REMARK 465 ALA B 123 REMARK 465 ASP B 124 REMARK 465 ALA B 125 REMARK 465 ASP B 126 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 7 CG OD1 ND2 REMARK 470 LYS A 35 CG CD CE NZ REMARK 470 TYR A 47 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN A 116 CG CD OE1 NE2 REMARK 470 ASP A 124 CG OD1 OD2 REMARK 470 ALA A 125 CB REMARK 470 PRO A 127 CG CD REMARK 470 ASN A 128 CG OD1 ND2 REMARK 470 ASN A 129 CG OD1 ND2 REMARK 470 ARG B 36 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 39 CG1 CG2 CD1 REMARK 470 TYR B 45 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 49 CG CD CE NZ REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 PRO B 127 CG CD REMARK 470 ASN B 128 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 146 O HOH A 335 1.90 REMARK 500 NH1 ARG A 87 O HOH A 362 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 270 O HOH B 400 2674 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 127 N - CA - CB ANGL. DEV. = 7.5 DEGREES REMARK 500 PRO B 127 N - CA - CB ANGL. DEV. = 7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 125 27.44 103.63 REMARK 500 ASP A 126 -137.39 51.69 REMARK 500 ASN B 50 -177.46 -174.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC88984 RELATED DB: TARGETDB DBREF 3COL A 1 193 UNP Q88T92 Q88T92_LACPL 1 193 DBREF 3COL B 1 193 UNP Q88T92 Q88T92_LACPL 1 193 SEQADV 3COL SER A -2 UNP Q88T92 EXPRESSION TAG SEQADV 3COL ASN A -1 UNP Q88T92 EXPRESSION TAG SEQADV 3COL ALA A 0 UNP Q88T92 EXPRESSION TAG SEQADV 3COL SER B -2 UNP Q88T92 EXPRESSION TAG SEQADV 3COL ASN B -1 UNP Q88T92 EXPRESSION TAG SEQADV 3COL ALA B 0 UNP Q88T92 EXPRESSION TAG SEQRES 1 A 196 SER ASN ALA MSE LYS LYS LYS ASP MSE ASN LYS GLN VAL SEQRES 2 A 196 LYS ILE GLN ASP ALA VAL ALA ALA ILE ILE LEU ALA GLU SEQRES 3 A 196 GLY PRO ALA GLY VAL SER THR THR LYS VAL ALA LYS ARG SEQRES 4 A 196 VAL GLY ILE ALA GLN SER ASN VAL TYR LEU TYR PHE LYS SEQRES 5 A 196 ASN LYS GLN ALA LEU ILE ASP SER VAL TYR ALA ARG GLU SEQRES 6 A 196 THR ASN ARG ILE LEU SER THR THR ASP LEU ASP ARG LEU SEQRES 7 A 196 SER ASP SER THR ILE ASP VAL THR THR ARG ILE ARG LEU SEQRES 8 A 196 TYR VAL GLN GLN VAL TYR ASP TYR SER LEU ALA ASN PRO SEQRES 9 A 196 ASP SER LEU THR ILE ILE GLN GLN ILE LYS ALA LEU ASN SEQRES 10 A 196 GLY GLN GLY MSE THR ILE SER ALA ALA ASP ALA ASP PRO SEQRES 11 A 196 ASN ASN ILE VAL ALA ASN LEU LEU THR ALA ALA ILE ASP SEQRES 12 A 196 ALA LYS VAL ILE LYS GLN LEU PRO VAL SER LEU HIS MSE SEQRES 13 A 196 GLY VAL VAL PHE SER THR ILE HIS THR HIS THR THR ASN SEQRES 14 A 196 ILE SER LYS GLY ARG TYR ALA GLN ASP GLN TYR THR PHE SEQRES 15 A 196 GLY ASP ILE PHE GLN MSE ILE TRP ASP ALA MSE LYS GLN SEQRES 16 A 196 ASP SEQRES 1 B 196 SER ASN ALA MSE LYS LYS LYS ASP MSE ASN LYS GLN VAL SEQRES 2 B 196 LYS ILE GLN ASP ALA VAL ALA ALA ILE ILE LEU ALA GLU SEQRES 3 B 196 GLY PRO ALA GLY VAL SER THR THR LYS VAL ALA LYS ARG SEQRES 4 B 196 VAL GLY ILE ALA GLN SER ASN VAL TYR LEU TYR PHE LYS SEQRES 5 B 196 ASN LYS GLN ALA LEU ILE ASP SER VAL TYR ALA ARG GLU SEQRES 6 B 196 THR ASN ARG ILE LEU SER THR THR ASP LEU ASP ARG LEU SEQRES 7 B 196 SER ASP SER THR ILE ASP VAL THR THR ARG ILE ARG LEU SEQRES 8 B 196 TYR VAL GLN GLN VAL TYR ASP TYR SER LEU ALA ASN PRO SEQRES 9 B 196 ASP SER LEU THR ILE ILE GLN GLN ILE LYS ALA LEU ASN SEQRES 10 B 196 GLY GLN GLY MSE THR ILE SER ALA ALA ASP ALA ASP PRO SEQRES 11 B 196 ASN ASN ILE VAL ALA ASN LEU LEU THR ALA ALA ILE ASP SEQRES 12 B 196 ALA LYS VAL ILE LYS GLN LEU PRO VAL SER LEU HIS MSE SEQRES 13 B 196 GLY VAL VAL PHE SER THR ILE HIS THR HIS THR THR ASN SEQRES 14 B 196 ILE SER LYS GLY ARG TYR ALA GLN ASP GLN TYR THR PHE SEQRES 15 B 196 GLY ASP ILE PHE GLN MSE ILE TRP ASP ALA MSE LYS GLN SEQRES 16 B 196 ASP MODRES 3COL MSE A 153 MET SELENOMETHIONINE MODRES 3COL MSE A 185 MET SELENOMETHIONINE MODRES 3COL MSE A 190 MET SELENOMETHIONINE MODRES 3COL MSE B 153 MET SELENOMETHIONINE MODRES 3COL MSE B 185 MET SELENOMETHIONINE MODRES 3COL MSE B 190 MET SELENOMETHIONINE HET MSE A 153 16 HET MSE A 185 8 HET MSE A 190 8 HET MSE B 153 16 HET MSE B 185 8 HET MSE B 190 8 HET GOL B 201 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *302(H2 O) HELIX 1 1 ASN A 7 GLY A 24 1 18 HELIX 2 2 PRO A 25 VAL A 28 5 4 HELIX 3 3 SER A 29 GLY A 38 1 10 HELIX 4 4 ALA A 40 LEU A 46 1 7 HELIX 5 5 ASN A 50 ARG A 65 1 16 HELIX 6 6 SER A 68 SER A 76 1 9 HELIX 7 7 ASP A 81 ASN A 100 1 20 HELIX 8 8 ASP A 102 GLY A 115 1 14 HELIX 9 9 ALA A 125 ASN A 128 5 4 HELIX 10 10 ASN A 129 ALA A 141 1 13 HELIX 11 11 PRO A 148 LYS A 169 1 22 HELIX 12 12 THR A 178 LYS A 191 1 14 HELIX 13 13 LYS B 8 GLY B 24 1 17 HELIX 14 14 PRO B 25 VAL B 28 5 4 HELIX 15 15 SER B 29 GLY B 38 1 10 HELIX 16 16 ALA B 40 LEU B 46 1 7 HELIX 17 17 ASN B 50 LEU B 67 1 18 HELIX 18 18 SER B 68 SER B 76 1 9 HELIX 19 19 ASP B 81 ASN B 100 1 20 HELIX 20 20 ASP B 102 ASN B 114 1 13 HELIX 21 21 ASN B 129 ALA B 141 1 13 HELIX 22 22 PRO B 148 LYS B 169 1 22 HELIX 23 23 THR B 178 LYS B 191 1 14 LINK C HIS A 152 N AMSE A 153 1555 1555 1.34 LINK C HIS A 152 N BMSE A 153 1555 1555 1.33 LINK C AMSE A 153 N GLY A 154 1555 1555 1.33 LINK C BMSE A 153 N GLY A 154 1555 1555 1.33 LINK C GLN A 184 N MSE A 185 1555 1555 1.33 LINK C MSE A 185 N ILE A 186 1555 1555 1.33 LINK C ALA A 189 N MSE A 190 1555 1555 1.33 LINK C MSE A 190 N LYS A 191 1555 1555 1.32 LINK C HIS B 152 N AMSE B 153 1555 1555 1.34 LINK C HIS B 152 N BMSE B 153 1555 1555 1.33 LINK C AMSE B 153 N GLY B 154 1555 1555 1.33 LINK C BMSE B 153 N GLY B 154 1555 1555 1.34 LINK C GLN B 184 N MSE B 185 1555 1555 1.32 LINK C MSE B 185 N ILE B 186 1555 1555 1.33 LINK C ALA B 189 N MSE B 190 1555 1555 1.33 LINK C MSE B 190 N LYS B 191 1555 1555 1.33 SITE 1 AC1 5 GLN A 108 GLN B 108 GLN B 109 ALA B 112 SITE 2 AC1 5 HIS B 161 CRYST1 64.213 66.936 93.404 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015573 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014940 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010706 0.00000