data_3CP0 # _entry.id 3CP0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3CP0 RCSB RCSB047041 WWPDB D_1000047041 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC20537.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3CP0 _pdbx_database_status.recvd_initial_deposition_date 2008-03-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kim, Y.' 1 'Tesar, C.' 2 'Abdullah, J.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title ;The crystal structure of the soluble domain of membrane protein implicated in regulation of membrane protease activity from Corynebacterium glutamicum. ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kim, Y.' 1 primary 'Tesar, C.' 2 primary 'Abdullah, J.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 3CP0 _cell.length_a 42.546 _cell.length_b 53.084 _cell.length_c 64.357 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CP0 _symmetry.space_group_name_H-M 'I 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Membrane protein implicated in regulation of membrane protease activity' 8923.986 1 ? ? 'CG1731 domain: Residues 64-142' ? 2 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 52 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNARPAIRKRLLKPKVLDSSPRALVGHRAEVLEDVGATSGQVRLDGSIWSARS(MSE)DPTHTFAEGEIVSVIDIQGTTA IVWKEA ; _entity_poly.pdbx_seq_one_letter_code_can ;SNARPAIRKRLLKPKVLDSSPRALVGHRAEVLEDVGATSGQVRLDGSIWSARSMDPTHTFAEGEIVSVIDIQGTTAIVWK EA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC20537.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 ARG n 1 5 PRO n 1 6 ALA n 1 7 ILE n 1 8 ARG n 1 9 LYS n 1 10 ARG n 1 11 LEU n 1 12 LEU n 1 13 LYS n 1 14 PRO n 1 15 LYS n 1 16 VAL n 1 17 LEU n 1 18 ASP n 1 19 SER n 1 20 SER n 1 21 PRO n 1 22 ARG n 1 23 ALA n 1 24 LEU n 1 25 VAL n 1 26 GLY n 1 27 HIS n 1 28 ARG n 1 29 ALA n 1 30 GLU n 1 31 VAL n 1 32 LEU n 1 33 GLU n 1 34 ASP n 1 35 VAL n 1 36 GLY n 1 37 ALA n 1 38 THR n 1 39 SER n 1 40 GLY n 1 41 GLN n 1 42 VAL n 1 43 ARG n 1 44 LEU n 1 45 ASP n 1 46 GLY n 1 47 SER n 1 48 ILE n 1 49 TRP n 1 50 SER n 1 51 ALA n 1 52 ARG n 1 53 SER n 1 54 MSE n 1 55 ASP n 1 56 PRO n 1 57 THR n 1 58 HIS n 1 59 THR n 1 60 PHE n 1 61 ALA n 1 62 GLU n 1 63 GLY n 1 64 GLU n 1 65 ILE n 1 66 VAL n 1 67 SER n 1 68 VAL n 1 69 ILE n 1 70 ASP n 1 71 ILE n 1 72 GLN n 1 73 GLY n 1 74 THR n 1 75 THR n 1 76 ALA n 1 77 ILE n 1 78 VAL n 1 79 TRP n 1 80 LYS n 1 81 GLU n 1 82 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Corynebacterium _entity_src_gen.pdbx_gene_src_gene cg1731 _entity_src_gen.gene_src_species 'Corynebacterium glutamicum' _entity_src_gen.gene_src_strain 'DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Corynebacterium glutamicum ATCC 13032' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 196627 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 13032 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6M555_CORGL _struct_ref.pdbx_db_accession Q6M555 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code RPAIRKRLLKPKVLDSSPRALVGHRAEVLEDVGATSGQVRLDGSIWSARSMDPTHTFAEGEIVSVIDIQGTTAIVWKEA _struct_ref.pdbx_align_begin 64 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3CP0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 82 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6M555 _struct_ref_seq.db_align_beg 64 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 142 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 79 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CP0 SER A 1 ? UNP Q6M555 ? ? 'EXPRESSION TAG' -2 1 1 3CP0 ASN A 2 ? UNP Q6M555 ? ? 'EXPRESSION TAG' -1 2 1 3CP0 ALA A 3 ? UNP Q6M555 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3CP0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_percent_sol 39.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details '0.05 M Zinc acetate dihydrate, 20% w/v PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-03-12 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9793 # _reflns.entry_id 3CP0 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 1.65 _reflns.number_obs 9137 _reflns.number_all 9137 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.113 _reflns.pdbx_netI_over_sigmaI 13.6 _reflns.B_iso_Wilson_estimate 20.43 _reflns.pdbx_redundancy 6.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.68 _reflns_shell.percent_possible_all 86.3 _reflns_shell.Rmerge_I_obs 0.436 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.22 _reflns_shell.pdbx_redundancy 2.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3CP0 _refine.ls_number_reflns_obs 8534 _refine.ls_number_reflns_all 8534 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.20 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 98.57 _refine.ls_R_factor_obs 0.17372 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17174 _refine.ls_R_factor_R_free 0.21594 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 428 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.B_iso_mean 24.127 _refine.aniso_B[1][1] -1.48 _refine.aniso_B[2][2] 1.30 _refine.aniso_B[3][3] 0.18 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.091 _refine.pdbx_overall_ESU_R_Free 0.097 _refine.overall_SU_ML 0.059 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.126 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 472 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 52 _refine_hist.number_atoms_total 528 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 33.20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.021 ? 567 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.707 1.924 ? 781 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.593 5.000 ? 79 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 29.510 22.692 ? 26 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.264 15.000 ? 94 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.681 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.132 0.200 ? 87 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 454 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.234 0.200 ? 238 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.304 0.200 ? 395 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.190 0.200 ? 44 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.019 0.200 ? 3 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.219 0.200 ? 25 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.154 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 0.096 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.246 1.500 ? 363 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.054 2.000 ? 596 'X-RAY DIFFRACTION' ? r_scbond_it 3.018 3.000 ? 204 'X-RAY DIFFRACTION' ? r_scangle_it 4.792 4.500 ? 185 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.650 _refine_ls_shell.d_res_low 1.693 _refine_ls_shell.number_reflns_R_work 563 _refine_ls_shell.R_factor_R_work 0.253 _refine_ls_shell.percent_reflns_obs 90.79 _refine_ls_shell.R_factor_R_free 0.280 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3CP0 _struct.title ;Crystal structure of the soluble domain of membrane protein implicated in regulation of membrane protease activity from Corynebacterium glutamicum ; _struct.pdbx_descriptor 'Membrane protein implicated in regulation of membrane protease activity' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CP0 _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text ;beta barrel, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Protease, MEMBRANE PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 20 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id VAL _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 25 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 17 _struct_conf.end_auth_comp_id VAL _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 22 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A SER 53 C A ? ? 1_555 A MSE 54 N ? ? A SER 50 A MSE 51 1_555 ? ? ? ? ? ? ? 1.336 ? covale2 covale ? ? A SER 53 C B ? ? 1_555 A MSE 54 N ? ? A SER 50 A MSE 51 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A MSE 54 C ? ? ? 1_555 A ASP 55 N ? ? A MSE 51 A ASP 52 1_555 ? ? ? ? ? ? ? 1.335 ? metalc1 metalc ? ? A HIS 27 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 24 A ZN 101 1_555 ? ? ? ? ? ? ? 2.046 ? metalc2 metalc ? ? A ASP 45 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 42 A ZN 101 1_555 ? ? ? ? ? ? ? 1.990 ? metalc3 metalc ? ? A HIS 58 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 55 A ZN 102 1_555 ? ? ? ? ? ? ? 2.053 ? metalc4 metalc ? ? A ASP 70 OD2 ? ? ? 1_555 D ZN . ZN ? ? A ASP 67 A ZN 103 1_555 ? ? ? ? ? ? ? 2.071 ? metalc5 metalc ? ? B ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 101 A HOH 140 1_555 ? ? ? ? ? ? ? 2.126 ? metalc6 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O A ? A ZN 102 A HOH 152 1_555 ? ? ? ? ? ? ? 2.357 ? metalc7 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O B ? A ZN 102 A HOH 153 1_555 ? ? ? ? ? ? ? 2.100 ? metalc8 metalc ? ? D ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 103 A HOH 146 1_555 ? ? ? ? ? ? ? 2.352 ? metalc9 metalc ? ? D ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 103 A HOH 105 1_555 ? ? ? ? ? ? ? 2.042 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 28 ? GLU A 33 ? ARG A 25 GLU A 30 A 2 GLN A 41 ? LEU A 44 ? GLN A 38 LEU A 41 A 3 SER A 47 ? SER A 53 ? SER A 44 SER A 50 A 4 THR A 75 ? LYS A 80 ? THR A 72 LYS A 77 A 5 ILE A 65 ? GLN A 72 ? ILE A 62 GLN A 69 A 6 ARG A 28 ? GLU A 33 ? ARG A 25 GLU A 30 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 32 ? N LEU A 29 O GLN A 41 ? O GLN A 38 A 2 3 N VAL A 42 ? N VAL A 39 O TRP A 49 ? O TRP A 46 A 3 4 N SER A 50 ? N SER A 47 O ALA A 76 ? O ALA A 73 A 4 5 O ILE A 77 ? O ILE A 74 N ILE A 69 ? N ILE A 66 A 5 6 O VAL A 66 ? O VAL A 63 N ALA A 29 ? N ALA A 26 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 101' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE ZN A 102' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE ZN A 103' AC4 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE CL A 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 27 ? HIS A 24 . ? 1_555 ? 2 AC1 4 ASP A 45 ? ASP A 42 . ? 1_555 ? 3 AC1 4 GLU A 81 ? GLU A 78 . ? 7_556 ? 4 AC1 4 HOH F . ? HOH A 140 . ? 1_555 ? 5 AC2 6 HIS A 58 ? HIS A 55 . ? 1_555 ? 6 AC2 6 HIS A 58 ? HIS A 55 . ? 7_656 ? 7 AC2 6 HOH F . ? HOH A 152 . ? 7_656 ? 8 AC2 6 HOH F . ? HOH A 152 . ? 1_555 ? 9 AC2 6 HOH F . ? HOH A 153 . ? 7_656 ? 10 AC2 6 HOH F . ? HOH A 153 . ? 1_555 ? 11 AC3 6 ASP A 70 ? ASP A 67 . ? 1_555 ? 12 AC3 6 ASP A 70 ? ASP A 67 . ? 6_655 ? 13 AC3 6 HOH F . ? HOH A 105 . ? 1_555 ? 14 AC3 6 HOH F . ? HOH A 105 . ? 6_655 ? 15 AC3 6 HOH F . ? HOH A 146 . ? 6_655 ? 16 AC3 6 HOH F . ? HOH A 146 . ? 1_555 ? 17 AC4 2 ARG A 28 ? ARG A 25 . ? 7_556 ? 18 AC4 2 ARG A 28 ? ARG A 25 . ? 1_555 ? # _database_PDB_matrix.entry_id 3CP0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3CP0 _atom_sites.fract_transf_matrix[1][1] 0.023504 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018838 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015538 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 ARG 4 1 ? ? ? A . n A 1 5 PRO 5 2 ? ? ? A . n A 1 6 ALA 6 3 ? ? ? A . n A 1 7 ILE 7 4 ? ? ? A . n A 1 8 ARG 8 5 ? ? ? A . n A 1 9 LYS 9 6 ? ? ? A . n A 1 10 ARG 10 7 ? ? ? A . n A 1 11 LEU 11 8 ? ? ? A . n A 1 12 LEU 12 9 ? ? ? A . n A 1 13 LYS 13 10 ? ? ? A . n A 1 14 PRO 14 11 ? ? ? A . n A 1 15 LYS 15 12 ? ? ? A . n A 1 16 VAL 16 13 ? ? ? A . n A 1 17 LEU 17 14 ? ? ? A . n A 1 18 ASP 18 15 ? ? ? A . n A 1 19 SER 19 16 ? ? ? A . n A 1 20 SER 20 17 17 SER SER A . n A 1 21 PRO 21 18 18 PRO PRO A . n A 1 22 ARG 22 19 19 ARG ARG A . n A 1 23 ALA 23 20 20 ALA ALA A . n A 1 24 LEU 24 21 21 LEU LEU A . n A 1 25 VAL 25 22 22 VAL VAL A . n A 1 26 GLY 26 23 23 GLY GLY A . n A 1 27 HIS 27 24 24 HIS HIS A . n A 1 28 ARG 28 25 25 ARG ARG A . n A 1 29 ALA 29 26 26 ALA ALA A . n A 1 30 GLU 30 27 27 GLU GLU A . n A 1 31 VAL 31 28 28 VAL VAL A . n A 1 32 LEU 32 29 29 LEU LEU A . n A 1 33 GLU 33 30 30 GLU GLU A . n A 1 34 ASP 34 31 31 ASP ASP A . n A 1 35 VAL 35 32 32 VAL VAL A . n A 1 36 GLY 36 33 33 GLY GLY A . n A 1 37 ALA 37 34 34 ALA ALA A . n A 1 38 THR 38 35 35 THR THR A . n A 1 39 SER 39 36 36 SER SER A . n A 1 40 GLY 40 37 37 GLY GLY A . n A 1 41 GLN 41 38 38 GLN GLN A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 ARG 43 40 40 ARG ARG A . n A 1 44 LEU 44 41 41 LEU LEU A . n A 1 45 ASP 45 42 42 ASP ASP A . n A 1 46 GLY 46 43 43 GLY GLY A . n A 1 47 SER 47 44 44 SER SER A . n A 1 48 ILE 48 45 45 ILE ILE A . n A 1 49 TRP 49 46 46 TRP TRP A . n A 1 50 SER 50 47 47 SER SER A . n A 1 51 ALA 51 48 48 ALA ALA A . n A 1 52 ARG 52 49 49 ARG ARG A . n A 1 53 SER 53 50 50 SER SER A . n A 1 54 MSE 54 51 51 MSE MSE A . n A 1 55 ASP 55 52 52 ASP ASP A . n A 1 56 PRO 56 53 53 PRO PRO A . n A 1 57 THR 57 54 54 THR THR A . n A 1 58 HIS 58 55 55 HIS HIS A . n A 1 59 THR 59 56 56 THR THR A . n A 1 60 PHE 60 57 57 PHE PHE A . n A 1 61 ALA 61 58 58 ALA ALA A . n A 1 62 GLU 62 59 59 GLU GLU A . n A 1 63 GLY 63 60 60 GLY GLY A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 ILE 65 62 62 ILE ILE A . n A 1 66 VAL 66 63 63 VAL VAL A . n A 1 67 SER 67 64 64 SER SER A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 ILE 69 66 66 ILE ILE A . n A 1 70 ASP 70 67 67 ASP ASP A . n A 1 71 ILE 71 68 68 ILE ILE A . n A 1 72 GLN 72 69 69 GLN GLN A . n A 1 73 GLY 73 70 70 GLY GLY A . n A 1 74 THR 74 71 71 THR THR A . n A 1 75 THR 75 72 72 THR THR A . n A 1 76 ALA 76 73 73 ALA ALA A . n A 1 77 ILE 77 74 74 ILE ILE A . n A 1 78 VAL 78 75 75 VAL VAL A . n A 1 79 TRP 79 76 76 TRP TRP A . n A 1 80 LYS 80 77 77 LYS LYS A . n A 1 81 GLU 81 78 78 GLU GLU A . n A 1 82 ALA 82 79 79 ALA ALA A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 54 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 51 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ZN 102 ? C ZN . 2 1 A ZN 103 ? D ZN . 3 1 A CL 104 ? E CL . 4 1 A HOH 117 ? F HOH . 5 1 A HOH 135 ? F HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 27 ? A HIS 24 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 45 ? A ASP 42 ? 1_555 112.7 ? 2 NE2 ? A HIS 27 ? A HIS 24 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 140 ? 1_555 104.3 ? 3 OD2 ? A ASP 45 ? A ASP 42 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 O ? F HOH . ? A HOH 140 ? 1_555 100.4 ? 4 ND1 ? A HIS 58 ? A HIS 55 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 O A F HOH . ? A HOH 152 ? 1_555 113.1 ? 5 ND1 ? A HIS 58 ? A HIS 55 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 O B F HOH . ? A HOH 153 ? 1_555 121.7 ? 6 O A F HOH . ? A HOH 152 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 O B F HOH . ? A HOH 153 ? 1_555 15.8 ? 7 OD2 ? A ASP 70 ? A ASP 67 ? 1_555 ZN ? D ZN . ? A ZN 103 ? 1_555 O ? F HOH . ? A HOH 146 ? 1_555 84.5 ? 8 OD2 ? A ASP 70 ? A ASP 67 ? 1_555 ZN ? D ZN . ? A ZN 103 ? 1_555 O ? F HOH . ? A HOH 105 ? 1_555 100.2 ? 9 O ? F HOH . ? A HOH 146 ? 1_555 ZN ? D ZN . ? A ZN 103 ? 1_555 O ? F HOH . ? A HOH 105 ? 1_555 74.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-15 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 19.7791 _pdbx_refine_tls.origin_y 3.1642 _pdbx_refine_tls.origin_z 25.9387 _pdbx_refine_tls.T[1][1] -0.0337 _pdbx_refine_tls.T[2][2] -0.0515 _pdbx_refine_tls.T[3][3] -0.0582 _pdbx_refine_tls.T[1][2] -0.0008 _pdbx_refine_tls.T[1][3] 0.0002 _pdbx_refine_tls.T[2][3] -0.0124 _pdbx_refine_tls.L[1][1] 2.7833 _pdbx_refine_tls.L[2][2] 2.2582 _pdbx_refine_tls.L[3][3] 2.3994 _pdbx_refine_tls.L[1][2] -0.0283 _pdbx_refine_tls.L[1][3] -0.4947 _pdbx_refine_tls.L[2][3] 0.5750 _pdbx_refine_tls.S[1][1] -0.0642 _pdbx_refine_tls.S[1][2] 0.0326 _pdbx_refine_tls.S[1][3] -0.1298 _pdbx_refine_tls.S[2][1] -0.0726 _pdbx_refine_tls.S[2][2] 0.0215 _pdbx_refine_tls.S[2][3] -0.0059 _pdbx_refine_tls.S[3][1] 0.0343 _pdbx_refine_tls.S[3][2] 0.0174 _pdbx_refine_tls.S[3][3] 0.0427 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 17 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 20 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 79 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 82 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 SBC-Collect 'data collection' . ? 2 HKL-3000 'data collection' . ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 HKL-3000 phasing . ? 6 MLPHARE phasing . ? 7 DM phasing . ? 8 SHELXD phasing . ? 9 RESOLVE phasing . ? 10 Coot 'model building' . ? 11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 35 ? A -143.40 27.46 2 1 GLU A 59 ? B -38.80 132.11 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A ARG 1 ? A ARG 4 5 1 Y 1 A PRO 2 ? A PRO 5 6 1 Y 1 A ALA 3 ? A ALA 6 7 1 Y 1 A ILE 4 ? A ILE 7 8 1 Y 1 A ARG 5 ? A ARG 8 9 1 Y 1 A LYS 6 ? A LYS 9 10 1 Y 1 A ARG 7 ? A ARG 10 11 1 Y 1 A LEU 8 ? A LEU 11 12 1 Y 1 A LEU 9 ? A LEU 12 13 1 Y 1 A LYS 10 ? A LYS 13 14 1 Y 1 A PRO 11 ? A PRO 14 15 1 Y 1 A LYS 12 ? A LYS 15 16 1 Y 1 A VAL 13 ? A VAL 16 17 1 Y 1 A LEU 14 ? A LEU 17 18 1 Y 1 A ASP 15 ? A ASP 18 19 1 Y 1 A SER 16 ? A SER 19 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'CHLORIDE ION' CL 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 101 101 ZN ZN A . C 2 ZN 1 102 102 ZN ZN A . D 2 ZN 1 103 103 ZN ZN A . E 3 CL 1 104 104 CL CL A . F 4 HOH 1 105 105 HOH HOH A . F 4 HOH 2 106 2 HOH HOH A . F 4 HOH 3 107 3 HOH HOH A . F 4 HOH 4 108 4 HOH HOH A . F 4 HOH 5 109 5 HOH HOH A . F 4 HOH 6 110 6 HOH HOH A . F 4 HOH 7 111 7 HOH HOH A . F 4 HOH 8 112 8 HOH HOH A . F 4 HOH 9 113 9 HOH HOH A . F 4 HOH 10 114 10 HOH HOH A . F 4 HOH 11 115 11 HOH HOH A . F 4 HOH 12 116 12 HOH HOH A . F 4 HOH 13 117 13 HOH HOH A . F 4 HOH 14 118 14 HOH HOH A . F 4 HOH 15 119 15 HOH HOH A . F 4 HOH 16 120 16 HOH HOH A . F 4 HOH 17 121 17 HOH HOH A . F 4 HOH 18 122 18 HOH HOH A . F 4 HOH 19 123 19 HOH HOH A . F 4 HOH 20 124 20 HOH HOH A . F 4 HOH 21 125 21 HOH HOH A . F 4 HOH 22 126 22 HOH HOH A . F 4 HOH 23 127 23 HOH HOH A . F 4 HOH 24 128 24 HOH HOH A . F 4 HOH 25 129 25 HOH HOH A . F 4 HOH 26 130 26 HOH HOH A . F 4 HOH 27 131 27 HOH HOH A . F 4 HOH 28 132 28 HOH HOH A . F 4 HOH 29 133 29 HOH HOH A . F 4 HOH 30 134 30 HOH HOH A . F 4 HOH 31 135 31 HOH HOH A . F 4 HOH 32 136 32 HOH HOH A . F 4 HOH 33 137 33 HOH HOH A . F 4 HOH 34 138 34 HOH HOH A . F 4 HOH 35 139 35 HOH HOH A . F 4 HOH 36 140 36 HOH HOH A . F 4 HOH 37 141 37 HOH HOH A . F 4 HOH 38 142 38 HOH HOH A . F 4 HOH 39 143 39 HOH HOH A . F 4 HOH 40 144 40 HOH HOH A . F 4 HOH 41 145 41 HOH HOH A . F 4 HOH 42 146 42 HOH HOH A . F 4 HOH 43 147 43 HOH HOH A . F 4 HOH 44 148 44 HOH HOH A . F 4 HOH 45 149 45 HOH HOH A . F 4 HOH 46 150 46 HOH HOH A . F 4 HOH 47 151 47 HOH HOH A . F 4 HOH 48 152 48 HOH HOH A . F 4 HOH 49 153 49 HOH HOH A . F 4 HOH 50 154 50 HOH HOH A . F 4 HOH 51 155 51 HOH HOH A . F 4 HOH 52 156 52 HOH HOH A . #