data_3CPM # _entry.id 3CPM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CPM pdb_00003cpm 10.2210/pdb3cpm/pdb RCSB RCSB047061 ? ? WWPDB D_1000047061 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.value' 17 3 'Structure model' '_struct_conn.pdbx_dist_value' 18 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3CPM _pdbx_database_status.recvd_initial_deposition_date 2008-03-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rodgers, D.W.' 1 'Houtz, R.L.' 2 'Dirk, L.M.A.' 3 'Schmidt, J.J.' 4 'Cai, Y.' 5 # _citation.id primary _citation.title ;Insights into the substrate specificity of plant peptide deformylase, an essential enzyme with potential for the development of novel biotechnology applications in agriculture ; _citation.journal_abbrev Biochem.J. _citation.journal_volume 413 _citation.page_first 417 _citation.page_last 427 _citation.year 2008 _citation.journal_id_ASTM BIJOAK _citation.country UK _citation.journal_id_ISSN 0264-6021 _citation.journal_id_CSD 0043 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18412546 _citation.pdbx_database_id_DOI 10.1042/BJ20071641 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dirk, L.M.' 1 ? primary 'Schmidt, J.J.' 2 ? primary 'Cai, Y.' 3 ? primary 'Barnes, J.C.' 4 ? primary 'Hanger, K.M.' 5 ? primary 'Nayak, N.R.' 6 ? primary 'Williams, M.A.' 7 ? primary 'Grossman, R.B.' 8 ? primary 'Houtz, R.L.' 9 ? primary 'Rodgers, D.W.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptide deformylase, chloroplast' 21918.014 1 3.5.1.88 ? 'residues 65-257' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 4 water nat water 18.015 60 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PDF, Polypeptide deformylase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEP GEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFF DRMTDQVLDSIREELEALEKKYEEKTGLPSPER ; _entity_poly.pdbx_seq_one_letter_code_can ;KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEP GEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFF DRMTDQVLDSIREELEALEKKYEEKTGLPSPER ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'ZINC ION' ZN 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ASP n 1 3 ASP n 1 4 LYS n 1 5 VAL n 1 6 ALA n 1 7 SER n 1 8 ALA n 1 9 THR n 1 10 ASP n 1 11 VAL n 1 12 GLN n 1 13 PHE n 1 14 GLU n 1 15 THR n 1 16 PRO n 1 17 LEU n 1 18 LYS n 1 19 ILE n 1 20 VAL n 1 21 GLU n 1 22 TYR n 1 23 PRO n 1 24 ASP n 1 25 PRO n 1 26 ILE n 1 27 LEU n 1 28 ARG n 1 29 ALA n 1 30 LYS n 1 31 ASN n 1 32 LYS n 1 33 ARG n 1 34 ILE n 1 35 ASP n 1 36 ILE n 1 37 PHE n 1 38 ASP n 1 39 GLU n 1 40 ASN n 1 41 LEU n 1 42 LYS n 1 43 ASN n 1 44 LEU n 1 45 VAL n 1 46 ASP n 1 47 ALA n 1 48 MET n 1 49 PHE n 1 50 ASP n 1 51 VAL n 1 52 MET n 1 53 TYR n 1 54 LYS n 1 55 THR n 1 56 ASP n 1 57 GLY n 1 58 ILE n 1 59 GLY n 1 60 LEU n 1 61 SER n 1 62 ALA n 1 63 PRO n 1 64 GLN n 1 65 VAL n 1 66 GLY n 1 67 LEU n 1 68 ASN n 1 69 VAL n 1 70 GLN n 1 71 LEU n 1 72 MET n 1 73 VAL n 1 74 PHE n 1 75 ASN n 1 76 PRO n 1 77 ALA n 1 78 GLY n 1 79 GLU n 1 80 PRO n 1 81 GLY n 1 82 GLU n 1 83 GLY n 1 84 LYS n 1 85 GLU n 1 86 ILE n 1 87 VAL n 1 88 LEU n 1 89 VAL n 1 90 ASN n 1 91 PRO n 1 92 LYS n 1 93 ILE n 1 94 LYS n 1 95 LYS n 1 96 TYR n 1 97 SER n 1 98 ASP n 1 99 LYS n 1 100 LEU n 1 101 VAL n 1 102 PRO n 1 103 PHE n 1 104 ASP n 1 105 GLU n 1 106 GLY n 1 107 CYS n 1 108 LEU n 1 109 SER n 1 110 PHE n 1 111 PRO n 1 112 GLY n 1 113 ILE n 1 114 TYR n 1 115 ALA n 1 116 GLU n 1 117 VAL n 1 118 VAL n 1 119 ARG n 1 120 PRO n 1 121 GLN n 1 122 SER n 1 123 VAL n 1 124 LYS n 1 125 ILE n 1 126 ASP n 1 127 ALA n 1 128 ARG n 1 129 ASP n 1 130 ILE n 1 131 THR n 1 132 GLY n 1 133 GLU n 1 134 ARG n 1 135 PHE n 1 136 SER n 1 137 ILE n 1 138 SER n 1 139 LEU n 1 140 SER n 1 141 ARG n 1 142 LEU n 1 143 PRO n 1 144 ALA n 1 145 ARG n 1 146 ILE n 1 147 PHE n 1 148 GLN n 1 149 HIS n 1 150 GLU n 1 151 TYR n 1 152 ASP n 1 153 HIS n 1 154 LEU n 1 155 GLU n 1 156 GLY n 1 157 VAL n 1 158 LEU n 1 159 PHE n 1 160 PHE n 1 161 ASP n 1 162 ARG n 1 163 MET n 1 164 THR n 1 165 ASP n 1 166 GLN n 1 167 VAL n 1 168 LEU n 1 169 ASP n 1 170 SER n 1 171 ILE n 1 172 ARG n 1 173 GLU n 1 174 GLU n 1 175 LEU n 1 176 GLU n 1 177 ALA n 1 178 LEU n 1 179 GLU n 1 180 LYS n 1 181 LYS n 1 182 TYR n 1 183 GLU n 1 184 GLU n 1 185 LYS n 1 186 THR n 1 187 GLY n 1 188 LEU n 1 189 PRO n 1 190 SER n 1 191 PRO n 1 192 GLU n 1 193 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PDF1B _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET23b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 65 ? ? ? A . n A 1 2 ASP 2 66 ? ? ? A . n A 1 3 ASP 3 67 ? ? ? A . n A 1 4 LYS 4 68 ? ? ? A . n A 1 5 VAL 5 69 ? ? ? A . n A 1 6 ALA 6 70 ? ? ? A . n A 1 7 SER 7 71 ? ? ? A . n A 1 8 ALA 8 72 ? ? ? A . n A 1 9 THR 9 73 ? ? ? A . n A 1 10 ASP 10 74 74 ASP ASP A . n A 1 11 VAL 11 75 75 VAL VAL A . n A 1 12 GLN 12 76 76 GLN GLN A . n A 1 13 PHE 13 77 77 PHE PHE A . n A 1 14 GLU 14 78 78 GLU GLU A . n A 1 15 THR 15 79 79 THR THR A . n A 1 16 PRO 16 80 80 PRO CPR A . n A 1 17 LEU 17 81 81 LEU LEU A . n A 1 18 LYS 18 82 82 LYS LYS A . n A 1 19 ILE 19 83 83 ILE ILE A . n A 1 20 VAL 20 84 84 VAL VAL A . n A 1 21 GLU 21 85 85 GLU GLU A . n A 1 22 TYR 22 86 86 TYR TYR A . n A 1 23 PRO 23 87 87 PRO PRO A . n A 1 24 ASP 24 88 88 ASP ASP A . n A 1 25 PRO 25 89 89 PRO PRO A . n A 1 26 ILE 26 90 90 ILE ILE A . n A 1 27 LEU 27 91 91 LEU LEU A . n A 1 28 ARG 28 92 92 ARG ARG A . n A 1 29 ALA 29 93 93 ALA ALA A . n A 1 30 LYS 30 94 94 LYS LYS A . n A 1 31 ASN 31 95 95 ASN ASN A . n A 1 32 LYS 32 96 96 LYS LYS A . n A 1 33 ARG 33 97 97 ARG ARG A . n A 1 34 ILE 34 98 98 ILE ILE A . n A 1 35 ASP 35 99 99 ASP ASP A . n A 1 36 ILE 36 100 100 ILE ILE A . n A 1 37 PHE 37 101 101 PHE PHE A . n A 1 38 ASP 38 102 102 ASP ASP A . n A 1 39 GLU 39 103 103 GLU GLU A . n A 1 40 ASN 40 104 104 ASN ASN A . n A 1 41 LEU 41 105 105 LEU LEU A . n A 1 42 LYS 42 106 106 LYS LYS A . n A 1 43 ASN 43 107 107 ASN ASN A . n A 1 44 LEU 44 108 108 LEU LEU A . n A 1 45 VAL 45 109 109 VAL VAL A . n A 1 46 ASP 46 110 110 ASP ASP A . n A 1 47 ALA 47 111 111 ALA ALA A . n A 1 48 MET 48 112 112 MET MET A . n A 1 49 PHE 49 113 113 PHE PHE A . n A 1 50 ASP 50 114 114 ASP ASP A . n A 1 51 VAL 51 115 115 VAL VAL A . n A 1 52 MET 52 116 116 MET MET A . n A 1 53 TYR 53 117 117 TYR TYR A . n A 1 54 LYS 54 118 118 LYS LYS A . n A 1 55 THR 55 119 119 THR THR A . n A 1 56 ASP 56 120 120 ASP ASP A . n A 1 57 GLY 57 121 121 GLY GLY A . n A 1 58 ILE 58 122 122 ILE ILE A . n A 1 59 GLY 59 123 123 GLY GLY A . n A 1 60 LEU 60 124 124 LEU LEU A . n A 1 61 SER 61 125 125 SER SER A . n A 1 62 ALA 62 126 126 ALA ALA A . n A 1 63 PRO 63 127 127 PRO PRO A . n A 1 64 GLN 64 128 128 GLN GLN A . n A 1 65 VAL 65 129 129 VAL VAL A . n A 1 66 GLY 66 130 130 GLY GLY A . n A 1 67 LEU 67 131 131 LEU LEU A . n A 1 68 ASN 68 132 132 ASN ASN A . n A 1 69 VAL 69 133 133 VAL VAL A . n A 1 70 GLN 70 134 134 GLN GLN A . n A 1 71 LEU 71 135 135 LEU LEU A . n A 1 72 MET 72 136 136 MET MET A . n A 1 73 VAL 73 137 137 VAL VAL A . n A 1 74 PHE 74 138 138 PHE PHE A . n A 1 75 ASN 75 139 139 ASN ASN A . n A 1 76 PRO 76 140 140 PRO PRO A . n A 1 77 ALA 77 141 141 ALA ALA A . n A 1 78 GLY 78 142 142 GLY GLY A . n A 1 79 GLU 79 143 143 GLU GLU A . n A 1 80 PRO 80 144 144 PRO PRO A . n A 1 81 GLY 81 145 145 GLY GLY A . n A 1 82 GLU 82 146 146 GLU GLU A . n A 1 83 GLY 83 147 147 GLY GLY A . n A 1 84 LYS 84 148 148 LYS LYS A . n A 1 85 GLU 85 149 149 GLU GLU A . n A 1 86 ILE 86 150 150 ILE ILE A . n A 1 87 VAL 87 151 151 VAL VAL A . n A 1 88 LEU 88 152 152 LEU LEU A . n A 1 89 VAL 89 153 153 VAL VAL A . n A 1 90 ASN 90 154 154 ASN ASN A . n A 1 91 PRO 91 155 155 PRO PRO A . n A 1 92 LYS 92 156 156 LYS LYS A . n A 1 93 ILE 93 157 157 ILE ILE A . n A 1 94 LYS 94 158 158 LYS LYS A . n A 1 95 LYS 95 159 159 LYS LYS A . n A 1 96 TYR 96 160 160 TYR TYR A . n A 1 97 SER 97 161 161 SER SER A . n A 1 98 ASP 98 162 162 ASP ASP A . n A 1 99 LYS 99 163 163 LYS LYS A . n A 1 100 LEU 100 164 164 LEU LEU A . n A 1 101 VAL 101 165 165 VAL VAL A . n A 1 102 PRO 102 166 166 PRO PRO A . n A 1 103 PHE 103 167 167 PHE PHE A . n A 1 104 ASP 104 168 168 ASP ASP A . n A 1 105 GLU 105 169 169 GLU GLU A . n A 1 106 GLY 106 170 170 GLY GLY A . n A 1 107 CYS 107 171 171 CYS CYS A . n A 1 108 LEU 108 172 172 LEU LEU A . n A 1 109 SER 109 173 173 SER SER A . n A 1 110 PHE 110 174 174 PHE PHE A . n A 1 111 PRO 111 175 175 PRO PRO A . n A 1 112 GLY 112 176 176 GLY GLY A . n A 1 113 ILE 113 177 177 ILE ILE A . n A 1 114 TYR 114 178 178 TYR TYR A . n A 1 115 ALA 115 179 179 ALA ALA A . n A 1 116 GLU 116 180 180 GLU GLU A . n A 1 117 VAL 117 181 181 VAL VAL A . n A 1 118 VAL 118 182 182 VAL VAL A . n A 1 119 ARG 119 183 183 ARG ARG A . n A 1 120 PRO 120 184 184 PRO PRO A . n A 1 121 GLN 121 185 185 GLN GLN A . n A 1 122 SER 122 186 186 SER SER A . n A 1 123 VAL 123 187 187 VAL VAL A . n A 1 124 LYS 124 188 188 LYS LYS A . n A 1 125 ILE 125 189 189 ILE ILE A . n A 1 126 ASP 126 190 190 ASP ASP A . n A 1 127 ALA 127 191 191 ALA ALA A . n A 1 128 ARG 128 192 192 ARG ARG A . n A 1 129 ASP 129 193 193 ASP ASP A . n A 1 130 ILE 130 194 194 ILE ILE A . n A 1 131 THR 131 195 195 THR THR A . n A 1 132 GLY 132 196 196 GLY GLY A . n A 1 133 GLU 133 197 197 GLU GLU A . n A 1 134 ARG 134 198 198 ARG ARG A . n A 1 135 PHE 135 199 199 PHE PHE A . n A 1 136 SER 136 200 200 SER SER A . n A 1 137 ILE 137 201 201 ILE ILE A . n A 1 138 SER 138 202 202 SER SER A . n A 1 139 LEU 139 203 203 LEU LEU A . n A 1 140 SER 140 204 204 SER SER A . n A 1 141 ARG 141 205 205 ARG ARG A . n A 1 142 LEU 142 206 206 LEU LEU A . n A 1 143 PRO 143 207 207 PRO PRO A . n A 1 144 ALA 144 208 208 ALA ALA A . n A 1 145 ARG 145 209 209 ARG ARG A . n A 1 146 ILE 146 210 210 ILE ILE A . n A 1 147 PHE 147 211 211 PHE PHE A . n A 1 148 GLN 148 212 212 GLN GLN A . n A 1 149 HIS 149 213 213 HIS HIS A . n A 1 150 GLU 150 214 214 GLU GLU A . n A 1 151 TYR 151 215 215 TYR TYR A . n A 1 152 ASP 152 216 216 ASP ASP A . n A 1 153 HIS 153 217 217 HIS HIS A . n A 1 154 LEU 154 218 218 LEU LEU A . n A 1 155 GLU 155 219 219 GLU GLU A . n A 1 156 GLY 156 220 220 GLY GLY A . n A 1 157 VAL 157 221 221 VAL VAL A . n A 1 158 LEU 158 222 222 LEU LEU A . n A 1 159 PHE 159 223 223 PHE PHE A . n A 1 160 PHE 160 224 224 PHE PHE A . n A 1 161 ASP 161 225 225 ASP ASP A . n A 1 162 ARG 162 226 226 ARG ARG A . n A 1 163 MET 163 227 227 MET MET A . n A 1 164 THR 164 228 228 THR THR A . n A 1 165 ASP 165 229 229 ASP ASP A . n A 1 166 GLN 166 230 230 GLN GLN A . n A 1 167 VAL 167 231 231 VAL VAL A . n A 1 168 LEU 168 232 232 LEU LEU A . n A 1 169 ASP 169 233 233 ASP ASP A . n A 1 170 SER 170 234 234 SER SER A . n A 1 171 ILE 171 235 235 ILE ILE A . n A 1 172 ARG 172 236 236 ARG ARG A . n A 1 173 GLU 173 237 237 GLU GLU A . n A 1 174 GLU 174 238 238 GLU GLU A . n A 1 175 LEU 175 239 239 LEU LEU A . n A 1 176 GLU 176 240 240 GLU GLU A . n A 1 177 ALA 177 241 241 ALA ALA A . n A 1 178 LEU 178 242 242 LEU LEU A . n A 1 179 GLU 179 243 243 GLU GLU A . n A 1 180 LYS 180 244 244 LYS LYS A . n A 1 181 LYS 181 245 245 LYS LYS A . n A 1 182 TYR 182 246 246 TYR TYR A . n A 1 183 GLU 183 247 247 GLU GLU A . n A 1 184 GLU 184 248 248 GLU GLU A . n A 1 185 LYS 185 249 249 LYS LYS A . n A 1 186 THR 186 250 250 THR THR A . n A 1 187 GLY 187 251 251 GLY GLY A . n A 1 188 LEU 188 252 252 LEU LEU A . n A 1 189 PRO 189 253 253 PRO PRO A . n A 1 190 SER 190 254 254 SER SER A . n A 1 191 PRO 191 255 255 PRO PRO A . n A 1 192 GLU 192 256 256 GLU GLU A . n A 1 193 ARG 193 257 257 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1 1 SO4 SO4 A . C 3 ZN 1 2 2 ZN ZN A . D 3 ZN 1 3 3 ZN ZN A . E 3 ZN 1 4 4 ZN ZN A . F 3 ZN 1 5 5 ZN ZN A . G 4 HOH 1 258 6 HOH TIP A . G 4 HOH 2 259 7 HOH TIP A . G 4 HOH 3 260 8 HOH TIP A . G 4 HOH 4 261 9 HOH TIP A . G 4 HOH 5 262 10 HOH TIP A . G 4 HOH 6 263 11 HOH TIP A . G 4 HOH 7 264 12 HOH TIP A . G 4 HOH 8 265 13 HOH TIP A . G 4 HOH 9 266 14 HOH TIP A . G 4 HOH 10 267 15 HOH TIP A . G 4 HOH 11 268 16 HOH TIP A . G 4 HOH 12 269 17 HOH TIP A . G 4 HOH 13 270 18 HOH TIP A . G 4 HOH 14 271 19 HOH TIP A . G 4 HOH 15 272 20 HOH TIP A . G 4 HOH 16 273 21 HOH TIP A . G 4 HOH 17 274 22 HOH TIP A . G 4 HOH 18 275 23 HOH TIP A . G 4 HOH 19 276 24 HOH TIP A . G 4 HOH 20 277 25 HOH TIP A . G 4 HOH 21 278 26 HOH TIP A . G 4 HOH 22 279 27 HOH TIP A . G 4 HOH 23 280 28 HOH TIP A . G 4 HOH 24 281 29 HOH TIP A . G 4 HOH 25 282 30 HOH TIP A . G 4 HOH 26 283 31 HOH TIP A . G 4 HOH 27 284 32 HOH TIP A . G 4 HOH 28 285 33 HOH TIP A . G 4 HOH 29 286 34 HOH TIP A . G 4 HOH 30 287 35 HOH TIP A . G 4 HOH 31 288 36 HOH TIP A . G 4 HOH 32 289 37 HOH TIP A . G 4 HOH 33 290 38 HOH TIP A . G 4 HOH 34 291 39 HOH TIP A . G 4 HOH 35 292 40 HOH TIP A . G 4 HOH 36 293 41 HOH TIP A . G 4 HOH 37 294 42 HOH TIP A . G 4 HOH 38 295 43 HOH TIP A . G 4 HOH 39 296 44 HOH TIP A . G 4 HOH 40 297 45 HOH TIP A . G 4 HOH 41 298 46 HOH TIP A . G 4 HOH 42 299 47 HOH TIP A . G 4 HOH 43 300 48 HOH TIP A . G 4 HOH 44 301 49 HOH TIP A . G 4 HOH 45 302 50 HOH TIP A . G 4 HOH 46 303 51 HOH TIP A . G 4 HOH 47 304 52 HOH TIP A . G 4 HOH 48 305 53 HOH TIP A . G 4 HOH 49 306 54 HOH TIP A . G 4 HOH 50 307 55 HOH TIP A . G 4 HOH 51 308 56 HOH TIP A . G 4 HOH 52 309 57 HOH TIP A . G 4 HOH 53 310 58 HOH TIP A . G 4 HOH 54 311 59 HOH TIP A . G 4 HOH 55 312 60 HOH TIP A . G 4 HOH 56 313 61 HOH TIP A . G 4 HOH 57 314 62 HOH TIP A . G 4 HOH 58 315 63 HOH TIP A . G 4 HOH 59 316 64 HOH TIP A . G 4 HOH 60 317 65 HOH TIP A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.2 ? 1 MAR345dtb 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CNS phasing . ? 5 # _cell.entry_id 3CPM _cell.length_a 50.902 _cell.length_b 50.902 _cell.length_c 144.783 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CPM _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3CPM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '15-18% PEG monomethyl ether 550, 28-70 mM ZnSO4, 70 mM MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2007-07-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3CPM _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.4 _reflns.number_obs 8067 _reflns.number_all 8067 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 18.1 _reflns.pdbx_redundancy 8.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.49 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3CPM _refine.ls_number_reflns_obs 8016 _refine.ls_number_reflns_all 8067 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1135949.73 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.64 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.235 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.235 _refine.ls_R_factor_R_free 0.297 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.6 _refine.ls_number_reflns_R_free 850 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 22.8 _refine.aniso_B[1][1] -1.27 _refine.aniso_B[2][2] -1.27 _refine.aniso_B[3][3] 2.55 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.4 _refine.solvent_model_param_bsol 36.5864 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3CPM _refine_analyze.Luzzati_coordinate_error_obs 0.31 _refine_analyze.Luzzati_sigma_a_obs 0.18 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.44 _refine_analyze.Luzzati_sigma_a_free 0.34 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1478 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 60 _refine_hist.number_atoms_total 1547 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 41.64 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.22 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.40 _refine_ls_shell.d_res_low 2.55 _refine_ls_shell.number_reflns_R_work 1168 _refine_ls_shell.R_factor_R_work 0.233 _refine_ls_shell.percent_reflns_obs 99.8 _refine_ls_shell.R_factor_R_free 0.333 _refine_ls_shell.R_factor_R_free_error 0.031 _refine_ls_shell.percent_reflns_R_free 9.2 _refine_ls_shell.number_reflns_R_free 119 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3CPM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3CPM _struct.title 'plant peptide deformylase PDF1B crystal structure' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CPM _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'alpha beta, Chloroplast, Hydrolase, Iron, Metal-binding, Protein biosynthesis, Transit peptide' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DEFC_ARATH _struct_ref.pdbx_db_accession Q9FUZ2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEP GEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFF DRMTDQVLDSIREELEALEKKYEEKTGLPSPER ; _struct_ref.pdbx_align_begin 65 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3CPM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 193 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9FUZ2 _struct_ref_seq.db_align_beg 65 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 257 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 65 _struct_ref_seq.pdbx_auth_seq_align_end 257 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1590 ? 2 MORE -284 ? 2 'SSA (A^2)' 19320 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G 2 1,2 A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_664 -y+1,-x+1,-z-1/2 0.0000000000 -1.0000000000 0.0000000000 50.9020000000 -1.0000000000 0.0000000000 0.0000000000 50.9020000000 0.0000000000 0.0000000000 -1.0000000000 -72.3915000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 24 ? ARG A 28 ? ASP A 88 ARG A 92 5 ? 5 HELX_P HELX_P2 2 ASP A 38 ? THR A 55 ? ASP A 102 THR A 119 1 ? 18 HELX_P HELX_P3 3 PRO A 63 ? GLY A 66 ? PRO A 127 GLY A 130 5 ? 4 HELX_P HELX_P4 4 SER A 140 ? GLU A 155 ? SER A 204 GLU A 219 1 ? 16 HELX_P HELX_P5 5 LEU A 158 ? MET A 163 ? LEU A 222 MET A 227 5 ? 6 HELX_P HELX_P6 6 THR A 164 ? SER A 170 ? THR A 228 SER A 234 1 ? 7 HELX_P HELX_P7 7 ILE A 171 ? GLY A 187 ? ILE A 235 GLY A 251 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 107 SG ? ? A ZN 2 A CYS 171 1_555 ? ? ? ? ? ? ? 2.367 ? ? metalc2 metalc ? ? C ZN . ZN ? ? ? 1_555 A HIS 149 NE2 ? ? A ZN 2 A HIS 213 1_555 ? ? ? ? ? ? ? 2.084 ? ? metalc3 metalc ? ? C ZN . ZN ? ? ? 1_555 A HIS 153 NE2 ? ? A ZN 2 A HIS 217 1_555 ? ? ? ? ? ? ? 1.944 ? ? metalc4 metalc ? ? C ZN . ZN ? ? ? 1_555 G HOH . O ? ? A ZN 2 A HOH 293 1_555 ? ? ? ? ? ? ? 2.188 ? ? metalc5 metalc ? ? D ZN . ZN ? ? ? 1_555 A ASP 46 OD1 ? ? A ZN 3 A ASP 110 1_555 ? ? ? ? ? ? ? 1.956 ? ? metalc6 metalc ? ? D ZN . ZN ? ? ? 1_555 A ASP 50 OD2 ? ? A ZN 3 A ASP 114 1_555 ? ? ? ? ? ? ? 2.098 ? ? metalc7 metalc ? ? E ZN . ZN ? ? ? 1_555 A ASP 10 OD1 ? ? A ZN 4 A ASP 74 1_555 ? ? ? ? ? ? ? 2.381 ? ? metalc8 metalc ? ? E ZN . ZN ? ? ? 1_555 A ASP 35 OD2 ? ? A ZN 4 A ASP 99 1_555 ? ? ? ? ? ? ? 1.934 ? ? metalc9 metalc ? ? F ZN . ZN ? ? ? 1_555 A GLU 173 OE1 ? ? A ZN 5 A GLU 237 1_555 ? ? ? ? ? ? ? 2.220 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 107 ? A CYS 171 ? 1_555 ZN ? C ZN . ? A ZN 2 ? 1_555 NE2 ? A HIS 149 ? A HIS 213 ? 1_555 111.8 ? 2 SG ? A CYS 107 ? A CYS 171 ? 1_555 ZN ? C ZN . ? A ZN 2 ? 1_555 NE2 ? A HIS 153 ? A HIS 217 ? 1_555 110.1 ? 3 NE2 ? A HIS 149 ? A HIS 213 ? 1_555 ZN ? C ZN . ? A ZN 2 ? 1_555 NE2 ? A HIS 153 ? A HIS 217 ? 1_555 106.9 ? 4 SG ? A CYS 107 ? A CYS 171 ? 1_555 ZN ? C ZN . ? A ZN 2 ? 1_555 O ? G HOH . ? A HOH 293 ? 1_555 125.5 ? 5 NE2 ? A HIS 149 ? A HIS 213 ? 1_555 ZN ? C ZN . ? A ZN 2 ? 1_555 O ? G HOH . ? A HOH 293 ? 1_555 97.7 ? 6 NE2 ? A HIS 153 ? A HIS 217 ? 1_555 ZN ? C ZN . ? A ZN 2 ? 1_555 O ? G HOH . ? A HOH 293 ? 1_555 102.9 ? 7 OD1 ? A ASP 46 ? A ASP 110 ? 1_555 ZN ? D ZN . ? A ZN 3 ? 1_555 OD2 ? A ASP 50 ? A ASP 114 ? 1_555 98.1 ? 8 OD1 ? A ASP 10 ? A ASP 74 ? 1_555 ZN ? E ZN . ? A ZN 4 ? 1_555 OD2 ? A ASP 35 ? A ASP 99 ? 1_555 106.7 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 86 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 87 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.43 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 59 ? SER A 61 ? GLY A 123 SER A 125 A 2 LEU A 71 ? PHE A 74 ? LEU A 135 PHE A 138 A 3 ILE A 86 ? TYR A 96 ? ILE A 150 TYR A 160 A 4 VAL A 123 ? ARG A 128 ? VAL A 187 ARG A 192 A 5 ARG A 134 ? LEU A 139 ? ARG A 198 LEU A 203 B 1 LEU A 100 ? GLU A 105 ? LEU A 164 GLU A 169 B 2 ALA A 115 ? PRO A 120 ? ALA A 179 PRO A 184 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 60 ? N LEU A 124 O VAL A 73 ? O VAL A 137 A 2 3 N MET A 72 ? N MET A 136 O LEU A 88 ? O LEU A 152 A 3 4 N LYS A 95 ? N LYS A 159 O LYS A 124 ? O LYS A 188 A 4 5 N VAL A 123 ? N VAL A 187 O LEU A 139 ? O LEU A 203 B 1 2 N PHE A 103 ? N PHE A 167 O VAL A 117 ? O VAL A 181 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 1 ? 6 'BINDING SITE FOR RESIDUE SO4 A 1' AC2 Software A ZN 2 ? 5 'BINDING SITE FOR RESIDUE ZN A 2' AC3 Software A ZN 3 ? 4 'BINDING SITE FOR RESIDUE ZN A 3' AC4 Software A ZN 4 ? 3 'BINDING SITE FOR RESIDUE ZN A 4' AC5 Software A ZN 5 ? 3 'BINDING SITE FOR RESIDUE ZN A 5' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG A 33 ? ARG A 97 . ? 1_555 ? 2 AC1 6 ASN A 90 ? ASN A 154 . ? 1_555 ? 3 AC1 6 GLY A 112 ? GLY A 176 . ? 3_545 ? 4 AC1 6 TYR A 114 ? TYR A 178 . ? 3_545 ? 5 AC1 6 ARG A 128 ? ARG A 192 . ? 1_555 ? 6 AC1 6 ARG A 134 ? ARG A 198 . ? 1_555 ? 7 AC2 5 GLN A 64 ? GLN A 128 . ? 1_555 ? 8 AC2 5 CYS A 107 ? CYS A 171 . ? 1_555 ? 9 AC2 5 HIS A 149 ? HIS A 213 . ? 1_555 ? 10 AC2 5 HIS A 153 ? HIS A 217 . ? 1_555 ? 11 AC2 5 HOH G . ? HOH A 293 . ? 1_555 ? 12 AC3 4 GLU A 39 ? GLU A 103 . ? 8_664 ? 13 AC3 4 LYS A 42 ? LYS A 106 . ? 8_664 ? 14 AC3 4 ASP A 46 ? ASP A 110 . ? 1_555 ? 15 AC3 4 ASP A 50 ? ASP A 114 . ? 1_555 ? 16 AC4 3 ASP A 10 ? ASP A 74 . ? 1_555 ? 17 AC4 3 ASP A 35 ? ASP A 99 . ? 1_555 ? 18 AC4 3 GLU A 174 ? GLU A 238 . ? 3_545 ? 19 AC5 3 GLU A 173 ? GLU A 237 . ? 1_555 ? 20 AC5 3 GLU A 176 ? GLU A 240 . ? 1_555 ? 21 AC5 3 HOH G . ? HOH A 272 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD2 A ASP 162 ? ? O A HOH 317 ? ? 2.09 2 1 OE1 A GLU 219 ? ? O A HOH 316 ? ? 2.14 3 1 O A VAL 181 ? ? NH2 A ARG 209 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 80 ? ? -11.02 127.26 2 1 ALA A 93 ? ? -52.26 -1.76 3 1 LYS A 94 ? ? 72.73 122.23 4 1 GLU A 146 ? ? -142.73 36.41 5 1 PRO A 175 ? ? -38.25 117.75 6 1 ARG A 205 ? ? 53.53 -143.64 7 1 PRO A 255 ? ? -81.37 47.16 8 1 GLU A 256 ? ? -56.55 -157.20 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 THR _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 79 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 80 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -89.38 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 65 ? A LYS 1 2 1 Y 1 A ASP 66 ? A ASP 2 3 1 Y 1 A ASP 67 ? A ASP 3 4 1 Y 1 A LYS 68 ? A LYS 4 5 1 Y 1 A VAL 69 ? A VAL 5 6 1 Y 1 A ALA 70 ? A ALA 6 7 1 Y 1 A SER 71 ? A SER 7 8 1 Y 1 A ALA 72 ? A ALA 8 9 1 Y 1 A THR 73 ? A THR 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 SO4 S S N N 304 SO4 O1 O N N 305 SO4 O2 O N N 306 SO4 O3 O N N 307 SO4 O4 O N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TYR N N N N 326 TYR CA C N S 327 TYR C C N N 328 TYR O O N N 329 TYR CB C N N 330 TYR CG C Y N 331 TYR CD1 C Y N 332 TYR CD2 C Y N 333 TYR CE1 C Y N 334 TYR CE2 C Y N 335 TYR CZ C Y N 336 TYR OH O N N 337 TYR OXT O N N 338 TYR H H N N 339 TYR H2 H N N 340 TYR HA H N N 341 TYR HB2 H N N 342 TYR HB3 H N N 343 TYR HD1 H N N 344 TYR HD2 H N N 345 TYR HE1 H N N 346 TYR HE2 H N N 347 TYR HH H N N 348 TYR HXT H N N 349 VAL N N N N 350 VAL CA C N S 351 VAL C C N N 352 VAL O O N N 353 VAL CB C N N 354 VAL CG1 C N N 355 VAL CG2 C N N 356 VAL OXT O N N 357 VAL H H N N 358 VAL H2 H N N 359 VAL HA H N N 360 VAL HB H N N 361 VAL HG11 H N N 362 VAL HG12 H N N 363 VAL HG13 H N N 364 VAL HG21 H N N 365 VAL HG22 H N N 366 VAL HG23 H N N 367 VAL HXT H N N 368 ZN ZN ZN N N 369 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SO4 S O1 doub N N 290 SO4 S O2 doub N N 291 SO4 S O3 sing N N 292 SO4 S O4 sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TYR N CA sing N N 310 TYR N H sing N N 311 TYR N H2 sing N N 312 TYR CA C sing N N 313 TYR CA CB sing N N 314 TYR CA HA sing N N 315 TYR C O doub N N 316 TYR C OXT sing N N 317 TYR CB CG sing N N 318 TYR CB HB2 sing N N 319 TYR CB HB3 sing N N 320 TYR CG CD1 doub Y N 321 TYR CG CD2 sing Y N 322 TYR CD1 CE1 sing Y N 323 TYR CD1 HD1 sing N N 324 TYR CD2 CE2 doub Y N 325 TYR CD2 HD2 sing N N 326 TYR CE1 CZ doub Y N 327 TYR CE1 HE1 sing N N 328 TYR CE2 CZ sing Y N 329 TYR CE2 HE2 sing N N 330 TYR CZ OH sing N N 331 TYR OH HH sing N N 332 TYR OXT HXT sing N N 333 VAL N CA sing N N 334 VAL N H sing N N 335 VAL N H2 sing N N 336 VAL CA C sing N N 337 VAL CA CB sing N N 338 VAL CA HA sing N N 339 VAL C O doub N N 340 VAL C OXT sing N N 341 VAL CB CG1 sing N N 342 VAL CB CG2 sing N N 343 VAL CB HB sing N N 344 VAL CG1 HG11 sing N N 345 VAL CG1 HG12 sing N N 346 VAL CG1 HG13 sing N N 347 VAL CG2 HG21 sing N N 348 VAL CG2 HG22 sing N N 349 VAL CG2 HG23 sing N N 350 VAL OXT HXT sing N N 351 # _atom_sites.entry_id 3CPM _atom_sites.fract_transf_matrix[1][1] 0.019646 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019646 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006907 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_