HEADER SIGNALING PROTEIN 07-APR-08 3CRN TITLE CRYSTAL STRUCTURE OF RESPONSE REGULATOR RECEIVER DOMAIN PROTEIN (CHEY- TITLE 2 LIKE) FROM METHANOSPIRILLUM HUNGATEI JF-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESPONSE REGULATOR RECEIVER DOMAIN PROTEIN, CHEY-LIKE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 2-122; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSPIRILLUM HUNGATEI JF-1; SOURCE 3 ORGANISM_TAXID: 323259; SOURCE 4 STRAIN: JF-1 / DSM 864; SOURCE 5 GENE: REC, MHUN_3201; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC) KEYWDS STRUCTURAL GENOMICS, SIGNAL REGULATOR RECEIVER DOMAIN, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, PSI-2, NEW YORK SGX RESEARCH CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, NYSGXRC, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.L.HINER,R.TORO,Y.PATSKOVSKY,J.FREEMAN,S.CHANG,D.SMITH,C.GROSHONG, AUTHOR 2 S.R.WASSERMAN,J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH AUTHOR 3 CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 8 03-FEB-21 3CRN 1 AUTHOR JRNL REMARK SEQADV REVDAT 8 2 1 LINK REVDAT 7 14-NOV-18 3CRN 1 AUTHOR REVDAT 6 25-OCT-17 3CRN 1 REMARK REVDAT 5 13-JUL-11 3CRN 1 VERSN REVDAT 4 09-JUN-09 3CRN 1 REVDAT REVDAT 3 24-FEB-09 3CRN 1 VERSN REVDAT 2 23-DEC-08 3CRN 1 AUTHOR KEYWDS REVDAT 1 22-APR-08 3CRN 0 JRNL AUTH R.L.HINER,R.TORO,Y.PATSKOVSKY,J.FREEMAN,S.CHANG,D.SMITH, JRNL AUTH 2 C.GROSHONG,S.R.WASSERMAN,J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF RESPONSE REGULATOR RECEIVER DOMAIN JRNL TITL 2 PROTEIN (CHEY-LIKE) FROM METHANOSPIRILLUM HUNGATEI JF-1. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 33209 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1752 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1730 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.4070 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.4780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2012 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.092 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.052 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2141 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2892 ; 1.264 ; 2.012 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 275 ; 5.122 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;38.827 ;25.938 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 422 ;12.530 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;18.554 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 326 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1564 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1302 ; 2.857 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2105 ; 4.314 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 839 ; 5.883 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 777 ; 9.206 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 124 4 REMARK 3 1 B 1 B 124 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 919 ; 0.37 ; 0.35 REMARK 3 MEDIUM THERMAL 1 B (A**2): 919 ; 3.24 ; 2.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CRN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 77.0 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36387 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 46.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.95000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4M SODIUM MALONATE PH 7.0, 10% REMARK 280 GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.96500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.34050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.99600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.34050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.96500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.99600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ACCORDING TO AUTHORS, THE BIOLOGICAL UNIT IS LIKELY A REMARK 300 HOMODIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -1 REMARK 465 SER A 0 REMARK 465 HIS A 130 REMARK 465 MSE B -1 REMARK 465 HIS B 125 REMARK 465 HIS B 126 REMARK 465 HIS B 127 REMARK 465 HIS B 128 REMARK 465 HIS B 129 REMARK 465 HIS B 130 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 131 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD1 REMARK 620 2 PHD A 52 OD2 93.3 REMARK 620 3 PHD A 52 OP1 148.7 71.5 REMARK 620 4 LYS A 54 O 99.9 82.4 104.8 REMARK 620 5 HOH A 206 O 87.5 97.0 68.2 172.7 REMARK 620 6 HOH A 215 O 85.2 168.1 115.1 86.2 94.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 132 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 202 O REMARK 620 2 HOH A 222 O 95.9 REMARK 620 3 ALA B 96 O 93.1 170.8 REMARK 620 4 HOH B 165 O 175.3 86.3 84.8 REMARK 620 5 HOH B 169 O 100.1 77.4 102.7 76.3 REMARK 620 6 HOH B 198 O 93.4 95.5 82.3 90.6 165.3 REMARK 620 7 HOH B 212 O 132.7 53.1 118.8 51.8 105.1 60.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 131 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 9 OD1 REMARK 620 2 PHD B 52 OD2 90.1 REMARK 620 3 PHD B 52 OP1 153.3 72.5 REMARK 620 4 LYS B 54 O 98.8 83.5 99.2 REMARK 620 5 HOH B 161 O 86.2 96.1 75.9 175.0 REMARK 620 6 HOH B 170 O 86.8 172.3 112.7 90.0 90.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 133 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO B 72 O REMARK 620 2 HOH B 178 O 95.9 REMARK 620 3 HOH B 180 O 81.1 92.3 REMARK 620 4 HOH B 186 O 82.7 155.4 63.1 REMARK 620 5 HOH B 192 O 171.6 88.1 91.4 90.6 REMARK 620 6 HOH B 201 O 103.6 127.8 138.0 76.0 79.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 134 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 135 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11024F RELATED DB: TARGETDB DBREF 3CRN A 2 122 UNP Q2FNF5 Q2FNF5_METHJ 2 122 DBREF 3CRN B 2 122 UNP Q2FNF5 Q2FNF5_METHJ 2 122 SEQADV 3CRN MSE A -1 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN SER A 0 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN LEU A 1 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN GLU A 123 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN GLY A 124 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS A 125 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS A 126 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS A 127 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS A 128 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS A 129 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS A 130 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN MSE B -1 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN SER B 0 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN LEU B 1 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN GLU B 123 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN GLY B 124 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS B 125 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS B 126 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS B 127 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS B 128 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS B 129 UNP Q2FNF5 EXPRESSION TAG SEQADV 3CRN HIS B 130 UNP Q2FNF5 EXPRESSION TAG SEQRES 1 A 132 MSE SER LEU LYS ARG ILE LEU ILE VAL ASP ASP ASP THR SEQRES 2 A 132 ALA ILE LEU ASP SER THR LYS GLN ILE LEU GLU PHE GLU SEQRES 3 A 132 GLY TYR GLU VAL GLU ILE ALA ALA THR ALA GLY GLU GLY SEQRES 4 A 132 LEU ALA LYS ILE GLU ASN GLU PHE PHE ASN LEU ALA LEU SEQRES 5 A 132 PHE PHD ILE LYS LEU PRO ASP MSE GLU GLY THR GLU LEU SEQRES 6 A 132 LEU GLU LYS ALA HIS LYS LEU ARG PRO GLY MSE LYS LYS SEQRES 7 A 132 ILE MSE VAL THR GLY TYR ALA SER LEU GLU ASN SER VAL SEQRES 8 A 132 PHE SER LEU ASN ALA GLY ALA ASP ALA TYR ILE MSE LYS SEQRES 9 A 132 PRO VAL ASN PRO ARG ASP LEU LEU GLU LYS ILE LYS GLU SEQRES 10 A 132 LYS LEU ASP GLU GLN GLU LYS GLU GLY HIS HIS HIS HIS SEQRES 11 A 132 HIS HIS SEQRES 1 B 132 MSE SER LEU LYS ARG ILE LEU ILE VAL ASP ASP ASP THR SEQRES 2 B 132 ALA ILE LEU ASP SER THR LYS GLN ILE LEU GLU PHE GLU SEQRES 3 B 132 GLY TYR GLU VAL GLU ILE ALA ALA THR ALA GLY GLU GLY SEQRES 4 B 132 LEU ALA LYS ILE GLU ASN GLU PHE PHE ASN LEU ALA LEU SEQRES 5 B 132 PHE PHD ILE LYS LEU PRO ASP MSE GLU GLY THR GLU LEU SEQRES 6 B 132 LEU GLU LYS ALA HIS LYS LEU ARG PRO GLY MSE LYS LYS SEQRES 7 B 132 ILE MSE VAL THR GLY TYR ALA SER LEU GLU ASN SER VAL SEQRES 8 B 132 PHE SER LEU ASN ALA GLY ALA ASP ALA TYR ILE MSE LYS SEQRES 9 B 132 PRO VAL ASN PRO ARG ASP LEU LEU GLU LYS ILE LYS GLU SEQRES 10 B 132 LYS LEU ASP GLU GLN GLU LYS GLU GLY HIS HIS HIS HIS SEQRES 11 B 132 HIS HIS MODRES 3CRN PHD A 52 ASP ASPARTYL PHOSPHATE MODRES 3CRN MSE A 58 MET SELENOMETHIONINE MODRES 3CRN MSE A 74 MET SELENOMETHIONINE MODRES 3CRN MSE A 78 MET SELENOMETHIONINE MODRES 3CRN MSE A 101 MET SELENOMETHIONINE MODRES 3CRN PHD B 52 ASP ASPARTYL PHOSPHATE MODRES 3CRN MSE B 58 MET SELENOMETHIONINE MODRES 3CRN MSE B 74 MET SELENOMETHIONINE MODRES 3CRN MSE B 78 MET SELENOMETHIONINE MODRES 3CRN MSE B 101 MET SELENOMETHIONINE HET PHD A 52 12 HET MSE A 58 8 HET MSE A 74 8 HET MSE A 78 8 HET MSE A 101 8 HET PHD B 52 12 HET MSE B 58 8 HET MSE B 74 8 HET MSE B 78 8 HET MSE B 101 8 HET NA A 131 1 HET GOL A 132 6 HET GOL A 133 6 HET NA B 131 1 HET NA B 132 1 HET NA B 133 1 HET GOL B 134 6 HET GOL B 135 6 HETNAM PHD ASPARTYL PHOSPHATE HETNAM MSE SELENOMETHIONINE HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 PHD 2(C4 H8 N O7 P) FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 NA 4(NA 1+) FORMUL 4 GOL 4(C3 H8 O3) FORMUL 11 HOH *180(H2 O) HELIX 1 1 ASP A 10 GLU A 24 1 15 HELIX 2 2 THR A 33 GLU A 44 1 12 HELIX 3 3 GLU A 59 ARG A 71 1 13 HELIX 4 4 SER A 84 ALA A 94 1 11 HELIX 5 5 ASN A 105 HIS A 129 1 25 HELIX 6 6 ASP B 10 GLY B 25 1 16 HELIX 7 7 THR B 33 GLU B 44 1 12 HELIX 8 8 GLU B 59 ARG B 71 1 13 HELIX 9 9 SER B 84 GLY B 95 1 12 HELIX 10 10 ASN B 105 GLY B 124 1 20 SHEET 1 A 5 GLU A 27 ALA A 31 0 SHEET 2 A 5 ARG A 3 VAL A 7 1 N ILE A 4 O GLU A 27 SHEET 3 A 5 LEU A 48 PHE A 51 1 O LEU A 50 N VAL A 7 SHEET 4 A 5 LYS A 75 THR A 80 1 O ILE A 77 N ALA A 49 SHEET 5 A 5 ALA A 98 MSE A 101 1 O ILE A 100 N MSE A 78 SHEET 1 B 5 GLU B 27 ALA B 31 0 SHEET 2 B 5 ARG B 3 VAL B 7 1 N ILE B 4 O GLU B 27 SHEET 3 B 5 LEU B 48 PHE B 51 1 O LEU B 50 N VAL B 7 SHEET 4 B 5 LYS B 75 THR B 80 1 O ILE B 77 N ALA B 49 SHEET 5 B 5 ALA B 98 MSE B 101 1 O ILE B 100 N MSE B 78 LINK C PHE A 51 N PHD A 52 1555 1555 1.35 LINK C PHD A 52 N ILE A 53 1555 1555 1.34 LINK C ASP A 57 N MSE A 58 1555 1555 1.33 LINK C MSE A 58 N GLU A 59 1555 1555 1.33 LINK C GLY A 73 N MSE A 74 1555 1555 1.33 LINK C MSE A 74 N LYS A 75 1555 1555 1.34 LINK C ILE A 77 N MSE A 78 1555 1555 1.34 LINK C MSE A 78 N VAL A 79 1555 1555 1.34 LINK C ILE A 100 N MSE A 101 1555 1555 1.34 LINK C MSE A 101 N LYS A 102 1555 1555 1.33 LINK C PHE B 51 N PHD B 52 1555 1555 1.33 LINK C PHD B 52 N ILE B 53 1555 1555 1.33 LINK C ASP B 57 N MSE B 58 1555 1555 1.33 LINK C MSE B 58 N GLU B 59 1555 1555 1.33 LINK C GLY B 73 N MSE B 74 1555 1555 1.34 LINK C MSE B 74 N LYS B 75 1555 1555 1.34 LINK C ILE B 77 N MSE B 78 1555 1555 1.33 LINK C MSE B 78 N VAL B 79 1555 1555 1.33 LINK C ILE B 100 N MSE B 101 1555 1555 1.33 LINK C MSE B 101 N LYS B 102 1555 1555 1.33 LINK OD1 ASP A 9 NA NA A 131 1555 1555 2.32 LINK OD2 PHD A 52 NA NA A 131 1555 1555 2.42 LINK OP1 PHD A 52 NA NA A 131 1555 1555 2.31 LINK O LYS A 54 NA NA A 131 1555 1555 2.35 LINK NA NA A 131 O HOH A 206 1555 1555 2.80 LINK NA NA A 131 O HOH A 215 1555 1555 2.46 LINK O HOH A 202 NA NA B 132 1555 1555 2.28 LINK O HOH A 222 NA NA B 132 1555 1555 2.38 LINK OD1 ASP B 9 NA NA B 131 1555 1555 2.32 LINK OD2 PHD B 52 NA NA B 131 1555 1555 2.48 LINK OP1 PHD B 52 NA NA B 131 1555 1555 2.21 LINK O LYS B 54 NA NA B 131 1555 1555 2.42 LINK O PRO B 72 NA NA B 133 1555 1555 2.54 LINK O ALA B 96 NA NA B 132 1555 1555 2.69 LINK NA NA B 131 O HOH B 161 1555 1555 2.62 LINK NA NA B 131 O HOH B 170 1555 1555 2.36 LINK NA NA B 132 O HOH B 165 1555 1555 2.62 LINK NA NA B 132 O HOH B 169 1555 1555 2.25 LINK NA NA B 132 O HOH B 198 1555 1555 2.34 LINK NA NA B 132 O HOH B 212 1555 1555 2.93 LINK NA NA B 133 O HOH B 178 1555 1555 2.60 LINK NA NA B 133 O HOH B 180 1555 1555 2.55 LINK NA NA B 133 O HOH B 186 1555 1555 2.79 LINK NA NA B 133 O HOH B 192 1555 1555 2.44 LINK NA NA B 133 O HOH B 201 1555 1555 2.31 CISPEP 1 LYS A 102 PRO A 103 0 1.21 CISPEP 2 LYS B 102 PRO B 103 0 -2.41 SITE 1 AC1 5 ASP A 9 PHD A 52 LYS A 54 HOH A 206 SITE 2 AC1 5 HOH A 215 SITE 1 AC2 5 ASP B 9 PHD B 52 LYS B 54 HOH B 161 SITE 2 AC2 5 HOH B 170 SITE 1 AC3 7 HOH A 202 HOH A 222 ALA B 96 HOH B 165 SITE 2 AC3 7 HOH B 169 HOH B 198 HOH B 212 SITE 1 AC4 7 PRO B 72 MSE B 74 HOH B 178 HOH B 180 SITE 2 AC4 7 HOH B 186 HOH B 192 HOH B 201 SITE 1 AC5 7 LEU A 1 LYS A 2 GLU A 24 GLY A 25 SITE 2 AC5 7 TYR A 26 HOH A 209 ASN B 105 SITE 1 AC6 7 TYR A 99 ILE A 100 MSE A 101 ASP A 108 SITE 2 AC6 7 LYS A 112 HOH A 162 ASN B 93 SITE 1 AC7 4 LEU B 1 LYS B 2 GLU B 24 GLY B 25 SITE 1 AC8 6 ASN A 93 GLY A 95 GLU B 115 LYS B 116 SITE 2 AC8 6 GLU B 119 HOH B 155 CRYST1 51.930 53.992 92.681 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019257 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018521 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010790 0.00000