data_3CRO # _entry.id 3CRO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CRO pdb_00003cro 10.2210/pdb3cro/pdb RCSB PDR001 ? ? WWPDB D_1000178923 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1991-10-15 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3CRO _pdbx_database_status.recvd_initial_deposition_date 1990-07-06 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mondragon, A.' 1 'Harrison, S.C.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The phage 434 Cro/OR1 complex at 2.5 A resolution.' J.Mol.Biol. 219 321 334 1991 JMOBAK UK 0022-2836 0070 ? 2038059 '10.1016/0022-2836(91)90568-Q' 1 'Structure of Phage 434 Cro Protein at 2.35 Angstroms Resolution' J.Mol.Biol. 205 179 188 1989 JMOBAK UK 0022-2836 0070 ? ? ? 2 'Recognition of a DNA Operator by the Repressor of Phage 434. A View at High Resolution' Science 242 899 907 1988 SCIEAS US 0036-8075 0038 ? ? ? 3 'Structure of the Repressor-Operator Complex of Bacteriophage 434' Nature 326 846 852 1987 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mondragon, A.' 1 ? primary 'Harrison, S.C.' 2 ? 1 'Mondragon, A.' 3 ? 1 'Wolberger, C.' 4 ? 1 'Harrison, S.C.' 5 ? 2 'Aggarwal, A.K.' 6 ? 2 'Rodgers, D.W.' 7 ? 2 'Drottar, M.' 8 ? 2 'Ptashne, M.' 9 ? 2 'Harrison, S.C.' 10 ? 3 'Anderson, J.E.' 11 ? 3 'Ptashne, M.' 12 ? 3 'Harrison, S.C.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3') ; 6106.990 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3') ; 6156.027 1 ? ? ? ? 3 polymer nat 'PROTEIN (434 CRO)' 8076.619 2 ? ? ? ? 4 water nat water 18.015 25 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DA)(DG)(DT)(DA)(DC)(DA)(DA)(DA)(DC)(DT)(DT)(DT)(DC)(DT)(DT)(DG)(DT)(DA)(DT)' AAGTACAAACTTTCTTGTAT A ? 2 polydeoxyribonucleotide no no '(DT)(DA)(DT)(DA)(DC)(DA)(DA)(DG)(DA)(DA)(DA)(DG)(DT)(DT)(DT)(DG)(DT)(DA)(DC)(DT)' TATACAAGAAAGTTTGTACT B ? 3 'polypeptide(L)' no no MQTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPRFLFEIAMALNCDPVWLQYGTKRGKAA MQTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPRFLFEIAMALNCDPVWLQYGTKRGKAA L,R ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DG n 1 4 DT n 1 5 DA n 1 6 DC n 1 7 DA n 1 8 DA n 1 9 DA n 1 10 DC n 1 11 DT n 1 12 DT n 1 13 DT n 1 14 DC n 1 15 DT n 1 16 DT n 1 17 DG n 1 18 DT n 1 19 DA n 1 20 DT n 2 1 DT n 2 2 DA n 2 3 DT n 2 4 DA n 2 5 DC n 2 6 DA n 2 7 DA n 2 8 DG n 2 9 DA n 2 10 DA n 2 11 DA n 2 12 DG n 2 13 DT n 2 14 DT n 2 15 DT n 2 16 DG n 2 17 DT n 2 18 DA n 2 19 DC n 2 20 DT n 3 1 MET n 3 2 GLN n 3 3 THR n 3 4 LEU n 3 5 SER n 3 6 GLU n 3 7 ARG n 3 8 LEU n 3 9 LYS n 3 10 LYS n 3 11 ARG n 3 12 ARG n 3 13 ILE n 3 14 ALA n 3 15 LEU n 3 16 LYS n 3 17 MET n 3 18 THR n 3 19 GLN n 3 20 THR n 3 21 GLU n 3 22 LEU n 3 23 ALA n 3 24 THR n 3 25 LYS n 3 26 ALA n 3 27 GLY n 3 28 VAL n 3 29 LYS n 3 30 GLN n 3 31 GLN n 3 32 SER n 3 33 ILE n 3 34 GLN n 3 35 LEU n 3 36 ILE n 3 37 GLU n 3 38 ALA n 3 39 GLY n 3 40 VAL n 3 41 THR n 3 42 LYS n 3 43 ARG n 3 44 PRO n 3 45 ARG n 3 46 PHE n 3 47 LEU n 3 48 PHE n 3 49 GLU n 3 50 ILE n 3 51 ALA n 3 52 MET n 3 53 ALA n 3 54 LEU n 3 55 ASN n 3 56 CYS n 3 57 ASP n 3 58 PRO n 3 59 VAL n 3 60 TRP n 3 61 LEU n 3 62 GLN n 3 63 TYR n 3 64 GLY n 3 65 THR n 3 66 LYS n 3 67 ARG n 3 68 GLY n 3 69 LYS n 3 70 ALA n 3 71 ALA n # _entity_src_nat.entity_id 3 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Phage 434' _entity_src_nat.pdbx_ncbi_taxonomy_id 10712 _entity_src_nat.genus 'Lambda-like viruses' _entity_src_nat.species 'Enterobacteria phage lambda' _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A A . n A 1 2 DA 2 2 2 DA A A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DA 8 8 8 DA A A . n A 1 9 DA 9 9 9 DA A A . n A 1 10 DC 10 10 10 DC C A . n A 1 11 DT 11 11 11 DT T A . n A 1 12 DT 12 12 12 DT T A . n A 1 13 DT 13 13 13 DT T A . n A 1 14 DC 14 14 14 DC C A . n A 1 15 DT 15 15 15 DT T A . n A 1 16 DT 16 16 16 DT T A . n A 1 17 DG 17 17 17 DG G A . n A 1 18 DT 18 18 18 DT T A . n A 1 19 DA 19 19 19 DA A A . n A 1 20 DT 20 20 20 DT T A . n B 2 1 DT 1 1 1 DT T B . n B 2 2 DA 2 2 2 DA A B . n B 2 3 DT 3 3 3 DT T B . n B 2 4 DA 4 4 4 DA A B . n B 2 5 DC 5 5 5 DC C B . n B 2 6 DA 6 6 6 DA A B . n B 2 7 DA 7 7 7 DA A B . n B 2 8 DG 8 8 8 DG G B . n B 2 9 DA 9 9 9 DA A B . n B 2 10 DA 10 10 10 DA A B . n B 2 11 DA 11 11 11 DA A B . n B 2 12 DG 12 12 12 DG G B . n B 2 13 DT 13 13 13 DT T B . n B 2 14 DT 14 14 14 DT T B . n B 2 15 DT 15 15 15 DT T B . n B 2 16 DG 16 16 16 DG G B . n B 2 17 DT 17 17 17 DT T B . n B 2 18 DA 18 18 18 DA A B . n B 2 19 DC 19 19 19 DC C B . n B 2 20 DT 20 20 20 DT T B . n C 3 1 MET 1 -1 -1 MET MET L . n C 3 2 GLN 2 0 0 GLN GLN L . n C 3 3 THR 3 1 1 THR THR L . n C 3 4 LEU 4 2 2 LEU LEU L . n C 3 5 SER 5 3 3 SER SER L . n C 3 6 GLU 6 4 4 GLU GLU L . n C 3 7 ARG 7 5 5 ARG ARG L . n C 3 8 LEU 8 6 6 LEU LEU L . n C 3 9 LYS 9 7 7 LYS LYS L . n C 3 10 LYS 10 8 8 LYS LYS L . n C 3 11 ARG 11 9 9 ARG ARG L . n C 3 12 ARG 12 10 10 ARG ARG L . n C 3 13 ILE 13 11 11 ILE ILE L . n C 3 14 ALA 14 12 12 ALA ALA L . n C 3 15 LEU 15 13 13 LEU LEU L . n C 3 16 LYS 16 14 14 LYS LYS L . n C 3 17 MET 17 15 15 MET MET L . n C 3 18 THR 18 16 16 THR THR L . n C 3 19 GLN 19 17 17 GLN GLN L . n C 3 20 THR 20 18 18 THR THR L . n C 3 21 GLU 21 19 19 GLU GLU L . n C 3 22 LEU 22 20 20 LEU LEU L . n C 3 23 ALA 23 21 21 ALA ALA L . n C 3 24 THR 24 22 22 THR THR L . n C 3 25 LYS 25 23 23 LYS LYS L . n C 3 26 ALA 26 24 24 ALA ALA L . n C 3 27 GLY 27 25 25 GLY GLY L . n C 3 28 VAL 28 26 26 VAL VAL L . n C 3 29 LYS 29 27 27 LYS LYS L . n C 3 30 GLN 30 28 28 GLN GLN L . n C 3 31 GLN 31 29 29 GLN GLN L . n C 3 32 SER 32 30 30 SER SER L . n C 3 33 ILE 33 31 31 ILE ILE L . n C 3 34 GLN 34 32 32 GLN GLN L . n C 3 35 LEU 35 33 33 LEU LEU L . n C 3 36 ILE 36 34 34 ILE ILE L . n C 3 37 GLU 37 35 35 GLU GLU L . n C 3 38 ALA 38 36 36 ALA ALA L . n C 3 39 GLY 39 37 37 GLY GLY L . n C 3 40 VAL 40 38 38 VAL VAL L . n C 3 41 THR 41 39 39 THR THR L . n C 3 42 LYS 42 40 40 LYS LYS L . n C 3 43 ARG 43 41 41 ARG ARG L . n C 3 44 PRO 44 42 42 PRO PRO L . n C 3 45 ARG 45 43 43 ARG ARG L . n C 3 46 PHE 46 44 44 PHE PHE L . n C 3 47 LEU 47 45 45 LEU LEU L . n C 3 48 PHE 48 46 46 PHE PHE L . n C 3 49 GLU 49 47 47 GLU GLU L . n C 3 50 ILE 50 48 48 ILE ILE L . n C 3 51 ALA 51 49 49 ALA ALA L . n C 3 52 MET 52 50 50 MET MET L . n C 3 53 ALA 53 51 51 ALA ALA L . n C 3 54 LEU 54 52 52 LEU LEU L . n C 3 55 ASN 55 53 53 ASN ASN L . n C 3 56 CYS 56 54 54 CYS CYS L . n C 3 57 ASP 57 55 55 ASP ASP L . n C 3 58 PRO 58 56 56 PRO PRO L . n C 3 59 VAL 59 57 57 VAL VAL L . n C 3 60 TRP 60 58 58 TRP TRP L . n C 3 61 LEU 61 59 59 LEU LEU L . n C 3 62 GLN 62 60 60 GLN GLN L . n C 3 63 TYR 63 61 61 TYR TYR L . n C 3 64 GLY 64 62 62 GLY GLY L . n C 3 65 THR 65 63 63 THR THR L . n C 3 66 LYS 66 64 64 LYS LYS L . n C 3 67 ARG 67 65 ? ? ? L . n C 3 68 GLY 68 66 ? ? ? L . n C 3 69 LYS 69 67 ? ? ? L . n C 3 70 ALA 70 68 ? ? ? L . n C 3 71 ALA 71 69 ? ? ? L . n D 3 1 MET 1 -1 -1 MET MET R . n D 3 2 GLN 2 0 0 GLN GLN R . n D 3 3 THR 3 1 1 THR THR R . n D 3 4 LEU 4 2 2 LEU LEU R . n D 3 5 SER 5 3 3 SER SER R . n D 3 6 GLU 6 4 4 GLU GLU R . n D 3 7 ARG 7 5 5 ARG ARG R . n D 3 8 LEU 8 6 6 LEU LEU R . n D 3 9 LYS 9 7 7 LYS LYS R . n D 3 10 LYS 10 8 8 LYS LYS R . n D 3 11 ARG 11 9 9 ARG ARG R . n D 3 12 ARG 12 10 10 ARG ARG R . n D 3 13 ILE 13 11 11 ILE ILE R . n D 3 14 ALA 14 12 12 ALA ALA R . n D 3 15 LEU 15 13 13 LEU LEU R . n D 3 16 LYS 16 14 14 LYS LYS R . n D 3 17 MET 17 15 15 MET MET R . n D 3 18 THR 18 16 16 THR THR R . n D 3 19 GLN 19 17 17 GLN GLN R . n D 3 20 THR 20 18 18 THR THR R . n D 3 21 GLU 21 19 19 GLU GLU R . n D 3 22 LEU 22 20 20 LEU LEU R . n D 3 23 ALA 23 21 21 ALA ALA R . n D 3 24 THR 24 22 22 THR THR R . n D 3 25 LYS 25 23 23 LYS LYS R . n D 3 26 ALA 26 24 24 ALA ALA R . n D 3 27 GLY 27 25 25 GLY GLY R . n D 3 28 VAL 28 26 26 VAL VAL R . n D 3 29 LYS 29 27 27 LYS LYS R . n D 3 30 GLN 30 28 28 GLN GLN R . n D 3 31 GLN 31 29 29 GLN GLN R . n D 3 32 SER 32 30 30 SER SER R . n D 3 33 ILE 33 31 31 ILE ILE R . n D 3 34 GLN 34 32 32 GLN GLN R . n D 3 35 LEU 35 33 33 LEU LEU R . n D 3 36 ILE 36 34 34 ILE ILE R . n D 3 37 GLU 37 35 35 GLU GLU R . n D 3 38 ALA 38 36 36 ALA ALA R . n D 3 39 GLY 39 37 37 GLY GLY R . n D 3 40 VAL 40 38 38 VAL VAL R . n D 3 41 THR 41 39 39 THR THR R . n D 3 42 LYS 42 40 40 LYS LYS R . n D 3 43 ARG 43 41 41 ARG ARG R . n D 3 44 PRO 44 42 42 PRO PRO R . n D 3 45 ARG 45 43 43 ARG ARG R . n D 3 46 PHE 46 44 44 PHE PHE R . n D 3 47 LEU 47 45 45 LEU LEU R . n D 3 48 PHE 48 46 46 PHE PHE R . n D 3 49 GLU 49 47 47 GLU GLU R . n D 3 50 ILE 50 48 48 ILE ILE R . n D 3 51 ALA 51 49 49 ALA ALA R . n D 3 52 MET 52 50 50 MET MET R . n D 3 53 ALA 53 51 51 ALA ALA R . n D 3 54 LEU 54 52 52 LEU LEU R . n D 3 55 ASN 55 53 53 ASN ASN R . n D 3 56 CYS 56 54 54 CYS CYS R . n D 3 57 ASP 57 55 55 ASP ASP R . n D 3 58 PRO 58 56 56 PRO PRO R . n D 3 59 VAL 59 57 57 VAL VAL R . n D 3 60 TRP 60 58 58 TRP TRP R . n D 3 61 LEU 61 59 59 LEU LEU R . n D 3 62 GLN 62 60 60 GLN GLN R . n D 3 63 TYR 63 61 61 TYR TYR R . n D 3 64 GLY 64 62 62 GLY GLY R . n D 3 65 THR 65 63 ? ? ? R . n D 3 66 LYS 66 64 ? ? ? R . n D 3 67 ARG 67 65 ? ? ? R . n D 3 68 GLY 68 66 ? ? ? R . n D 3 69 LYS 69 67 ? ? ? R . n D 3 70 ALA 70 68 ? ? ? R . n D 3 71 ALA 71 69 ? ? ? R . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 21 14 HOH HOH A . E 4 HOH 2 22 19 HOH HOH A . E 4 HOH 3 23 20 HOH HOH A . E 4 HOH 4 24 22 HOH HOH A . F 4 HOH 1 21 5 HOH HOH B . F 4 HOH 2 22 21 HOH HOH B . F 4 HOH 3 23 23 HOH HOH B . F 4 HOH 4 24 24 HOH HOH B . G 4 HOH 1 70 1 HOH HOH L . G 4 HOH 2 71 2 HOH HOH L . G 4 HOH 3 72 3 HOH HOH L . G 4 HOH 4 73 4 HOH HOH L . G 4 HOH 5 74 6 HOH HOH L . G 4 HOH 6 75 7 HOH HOH L . G 4 HOH 7 76 8 HOH HOH L . G 4 HOH 8 77 16 HOH HOH L . G 4 HOH 9 78 25 HOH HOH L . H 4 HOH 1 70 9 HOH HOH R . H 4 HOH 2 71 10 HOH HOH R . H 4 HOH 3 72 11 HOH HOH R . H 4 HOH 4 73 12 HOH HOH R . H 4 HOH 5 74 13 HOH HOH R . H 4 HOH 6 75 15 HOH HOH R . H 4 HOH 7 76 17 HOH HOH R . H 4 HOH 8 77 18 HOH HOH R . # _software.name TNT _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 3CRO _cell.length_a 49.200 _cell.length_b 47.600 _cell.length_c 61.700 _cell.angle_alpha 90.00 _cell.angle_beta 109.50 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CRO _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 3CRO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.95 _exptl_crystal.density_Matthews 2.36 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 277.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.20 _exptl_crystal_grow.pdbx_details 'pH 6.20, temperature 277.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 'PEG 3500' ? ? ? 1 3 1 MES ? ? ? 1 4 1 NACL ? ? ? 1 5 1 MGCL2 ? ? ? 1 6 1 SPERMINE ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 277.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type XENTRONICS _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ELLIOTT GX-13' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3CRO _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 2.500 _reflns.number_obs 7232 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3CRO _refine.ls_number_reflns_obs 5351 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2200000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;DENSITY FOR THE LAST SIX CARBOXY TERMINAL RESIDUES (64 - 70) WAS NOT OBSERVED IN THE MAP AT ANY STAGE OF THE REFINEMENT AND THESE RESIDUES ARE PROBABLY DISORDERED. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1042 _refine_hist.pdbx_number_atoms_nucleic_acid 814 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 25 _refine_hist.number_atoms_total 1881 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 10.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? t_angle_deg 2.300 ? ? ? 'X-RAY DIFFRACTION' ? t_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_gen_planes 0.010 ? ? ? 'X-RAY DIFFRACTION' ? t_it ? ? ? ? 'X-RAY DIFFRACTION' ? t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 3CRO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3CRO _struct.title 'THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CRO _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, DOUBLE HELIX, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_code _struct_ref.db_name _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 RCRO_BP434 UNP 3 P03036 ? ? ? 2 3CRO PDB 1 3CRO ? ? ? 3 3CRO PDB 2 3CRO ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CRO L 1 ? 71 ? P03036 1 ? 71 ? -1 69 2 1 3CRO R 1 ? 71 ? P03036 1 ? 71 ? -1 69 3 2 3CRO A 1 ? 20 ? 3CRO 1 ? 20 ? 1 20 4 3 3CRO B 1 ? 20 ? 3CRO 1 ? 20 ? 1 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;THE TWO PROTEIN DOMAINS HAVE BEEN ASSIGNED CHAIN INDICATORS *L* AND *R*. THE TWO DNA CHAINS HAVE BEEN ASSIGNED CHAIN INDICATORS *A* AND *B*. THE UNIT CELL CONTAINS TWO COMPLEXES EACH OF WHICH CONSISTS OF A PROTEIN DIMER AND TWO DIFFERENT STRANDS OF DNA. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1L THR C 3 ? ALA C 14 ? THR L 1 ALA L 12 1 ? 12 HELX_P HELX_P2 H2L THR C 18 ? THR C 24 ? THR L 16 THR L 22 1 ? 7 HELX_P HELX_P3 H3L GLN C 30 ? ALA C 38 ? GLN L 28 ALA L 36 1 ? 9 HELX_P HELX_P4 H4L LEU C 47 ? ALA C 53 ? LEU L 45 ALA L 51 1 ? 7 HELX_P HELX_P5 H5L PRO C 58 ? TYR C 63 ? PRO L 56 TYR L 61 1 ? 6 HELX_P HELX_P6 H1R THR D 3 ? ALA D 14 ? THR R 1 ALA R 12 1 ? 12 HELX_P HELX_P7 H2R THR D 18 ? THR D 24 ? THR R 16 THR R 22 1 ? 7 HELX_P HELX_P8 H3R GLN D 30 ? ALA D 38 ? GLN R 28 ALA R 36 1 ? 9 HELX_P HELX_P9 H4R LEU D 47 ? ALA D 53 ? LEU R 45 ALA R 51 1 ? 7 HELX_P HELX_P10 H5R PRO D 58 ? TYR D 63 ? PRO R 56 TYR R 61 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 20 N3 ? ? A DA 2 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 20 O4 ? ? A DA 2 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 19 N3 ? ? A DG 3 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 19 O2 ? ? A DG 3 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 19 N4 ? ? A DG 3 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 18 N1 ? ? A DT 4 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 18 N6 ? ? A DT 4 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 17 N3 ? ? A DA 5 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 17 O4 ? ? A DA 5 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 16 N1 ? ? A DC 6 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 16 O6 ? ? A DC 6 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 16 N2 ? ? A DC 6 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 15 N3 ? ? A DA 7 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 15 O4 ? ? A DA 7 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 14 N3 ? ? A DA 8 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 14 O4 ? ? A DA 8 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 13 N3 ? ? A DA 9 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 13 O4 ? ? A DA 9 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 10 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 10 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 10 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 11 N1 ? ? A DT 11 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 11 N6 ? ? A DT 11 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 10 N1 ? ? A DT 12 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 10 N6 ? ? A DT 12 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 9 N1 ? ? A DT 13 B DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 9 N6 ? ? A DT 13 B DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 14 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 14 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 14 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 14 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 14 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 14 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 15 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 15 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 16 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 16 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 16 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 16 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 17 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 17 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 17 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 17 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 17 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 17 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 18 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 18 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DT 18 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 18 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 19 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 19 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DT 20 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 20 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DT 20 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 20 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A DT 15 ? ? "C3'" A DT 15 ? ? 1.348 1.419 -0.071 0.006 N 2 1 CD L GLU 19 ? ? OE2 L GLU 19 ? ? 1.319 1.252 0.067 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.33 108.30 2.03 0.30 N 2 1 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.31 108.30 2.01 0.30 N 3 1 "O4'" A DC 14 ? ? "C1'" A DC 14 ? ? N1 A DC 14 ? ? 110.46 108.30 2.16 0.30 N 4 1 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 110.95 108.30 2.65 0.30 N 5 1 "C3'" A DT 15 ? ? "O3'" A DT 15 ? ? P A DT 16 ? ? 108.46 119.70 -11.24 1.20 Y 6 1 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.78 108.30 2.48 0.30 N 7 1 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.58 108.30 2.28 0.30 N 8 1 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 111.18 108.30 2.88 0.30 N 9 1 "O4'" B DA 7 ? ? "C1'" B DA 7 ? ? N9 B DA 7 ? ? 112.27 108.30 3.97 0.30 N 10 1 "O5'" B DG 12 ? ? P B DG 12 ? ? OP1 B DG 12 ? ? 98.89 105.70 -6.81 0.90 N 11 1 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 110.29 108.30 1.99 0.30 N 12 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.32 108.30 3.02 0.30 N 13 1 N L GLU 19 ? ? CA L GLU 19 ? ? CB L GLU 19 ? ? 122.42 110.60 11.82 1.80 N 14 1 CB L ASP 55 ? ? CG L ASP 55 ? ? OD1 L ASP 55 ? ? 124.58 118.30 6.28 0.90 N 15 1 CB L ASP 55 ? ? CG L ASP 55 ? ? OD2 L ASP 55 ? ? 112.86 118.30 -5.44 0.90 N 16 1 CB L TYR 61 ? ? CG L TYR 61 ? ? CD1 L TYR 61 ? ? 124.80 121.00 3.80 0.60 N 17 1 N R PHE 44 ? ? CA R PHE 44 ? ? CB R PHE 44 ? ? 121.40 110.60 10.80 1.80 N 18 1 CB R ALA 49 ? ? CA R ALA 49 ? ? C R ALA 49 ? ? 99.19 110.10 -10.91 1.50 N 19 1 CB R ASP 55 ? ? CG R ASP 55 ? ? OD1 R ASP 55 ? ? 124.30 118.30 6.00 0.90 N 20 1 CB R ASP 55 ? ? CG R ASP 55 ? ? OD2 R ASP 55 ? ? 111.65 118.30 -6.65 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN R 0 ? ? 101.31 -130.87 2 1 THR R 1 ? ? -40.83 161.07 3 1 LYS R 7 ? ? -60.34 -83.39 4 1 LYS R 8 ? ? -14.67 -63.18 5 1 LYS R 14 ? ? 63.69 75.10 6 1 GLN R 17 ? ? -43.27 -77.23 7 1 LEU R 20 ? ? -62.90 -73.94 8 1 ALA R 21 ? ? -35.33 -32.24 9 1 VAL R 26 ? ? -122.61 -158.16 10 1 ARG R 41 ? ? -160.97 65.48 11 1 PRO R 42 ? ? -34.13 156.86 12 1 ILE R 48 ? ? -53.77 -82.96 13 1 ALA R 49 ? ? -31.74 -21.12 14 1 ASN R 53 ? ? 72.24 66.30 15 1 CYS R 54 ? ? -152.48 -145.47 16 1 TYR R 61 ? ? -121.57 -135.05 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CA _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id R _pdbx_validate_chiral.auth_comp_id ASP _pdbx_validate_chiral.auth_seq_id 55 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # _pdbx_entry_details.entry_id 3CRO _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE DNA CHAINS ARE ALIGNED AS FOLLOWS *B* 5(PRIME) T-A-T-A-C-A-A-G-A-A-A-G-T-T-T-G-T-A-C-T *A* 3(PRIME) T-A-T-G-T-T-C-T-T-T-C-A-A-A-C-A-T-G-A-A THE DNA CHAINS ARE NUMBERED SEQUENTIALLY. THE FOLLOWING TABLE PRESENTS THE RELATIONSHIP BETWEEN THE SEQUENTIAL DNA NUMBERING AND THAT USED IN THE PAPER CITED ON THE *JRNL* RECORDS ABOVE: PDB ENTRY PUBLISHED --------- --------- A A 1 -4R A A 2 -3R G A 3 -2R T A 4 -1R A A 5 1R C A 6 2R A A 7 3R A A 8 4R A A 9 5R C A 10 6R T A 11 7R T A 12 7'L T A 13 6'L C A 14 5'L T A 15 4'L T A 16 3'L G A 17 2'L T A 18 1'L A A 19 -1'L T A 20 -2'L T B 1 -3L A B 2 -2L T B 3 -1L A B 4 1L C B 5 2L A B 6 3L A B 7 4L G B 8 5L A B 9 6L A B 10 7L A B 11 7'R G B 12 6'R T B 13 5'R T B 14 4'R T B 15 3'R G B 16 2'R T B 17 1'R A B 18 -1'R C B 19 -2'R T B 20 -3'R ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L ARG 65 ? C ARG 67 2 1 Y 1 L GLY 66 ? C GLY 68 3 1 Y 1 L LYS 67 ? C LYS 69 4 1 Y 1 L ALA 68 ? C ALA 70 5 1 Y 1 L ALA 69 ? C ALA 71 6 1 Y 1 R THR 63 ? D THR 65 7 1 Y 1 R LYS 64 ? D LYS 66 8 1 Y 1 R ARG 65 ? D ARG 67 9 1 Y 1 R GLY 66 ? D GLY 68 10 1 Y 1 R LYS 67 ? D LYS 69 11 1 Y 1 R ALA 68 ? D ALA 70 12 1 Y 1 R ALA 69 ? D ALA 71 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HOH O O N N 280 HOH H1 H N N 281 HOH H2 H N N 282 ILE N N N N 283 ILE CA C N S 284 ILE C C N N 285 ILE O O N N 286 ILE CB C N S 287 ILE CG1 C N N 288 ILE CG2 C N N 289 ILE CD1 C N N 290 ILE OXT O N N 291 ILE H H N N 292 ILE H2 H N N 293 ILE HA H N N 294 ILE HB H N N 295 ILE HG12 H N N 296 ILE HG13 H N N 297 ILE HG21 H N N 298 ILE HG22 H N N 299 ILE HG23 H N N 300 ILE HD11 H N N 301 ILE HD12 H N N 302 ILE HD13 H N N 303 ILE HXT H N N 304 LEU N N N N 305 LEU CA C N S 306 LEU C C N N 307 LEU O O N N 308 LEU CB C N N 309 LEU CG C N N 310 LEU CD1 C N N 311 LEU CD2 C N N 312 LEU OXT O N N 313 LEU H H N N 314 LEU H2 H N N 315 LEU HA H N N 316 LEU HB2 H N N 317 LEU HB3 H N N 318 LEU HG H N N 319 LEU HD11 H N N 320 LEU HD12 H N N 321 LEU HD13 H N N 322 LEU HD21 H N N 323 LEU HD22 H N N 324 LEU HD23 H N N 325 LEU HXT H N N 326 LYS N N N N 327 LYS CA C N S 328 LYS C C N N 329 LYS O O N N 330 LYS CB C N N 331 LYS CG C N N 332 LYS CD C N N 333 LYS CE C N N 334 LYS NZ N N N 335 LYS OXT O N N 336 LYS H H N N 337 LYS H2 H N N 338 LYS HA H N N 339 LYS HB2 H N N 340 LYS HB3 H N N 341 LYS HG2 H N N 342 LYS HG3 H N N 343 LYS HD2 H N N 344 LYS HD3 H N N 345 LYS HE2 H N N 346 LYS HE3 H N N 347 LYS HZ1 H N N 348 LYS HZ2 H N N 349 LYS HZ3 H N N 350 LYS HXT H N N 351 MET N N N N 352 MET CA C N S 353 MET C C N N 354 MET O O N N 355 MET CB C N N 356 MET CG C N N 357 MET SD S N N 358 MET CE C N N 359 MET OXT O N N 360 MET H H N N 361 MET H2 H N N 362 MET HA H N N 363 MET HB2 H N N 364 MET HB3 H N N 365 MET HG2 H N N 366 MET HG3 H N N 367 MET HE1 H N N 368 MET HE2 H N N 369 MET HE3 H N N 370 MET HXT H N N 371 PHE N N N N 372 PHE CA C N S 373 PHE C C N N 374 PHE O O N N 375 PHE CB C N N 376 PHE CG C Y N 377 PHE CD1 C Y N 378 PHE CD2 C Y N 379 PHE CE1 C Y N 380 PHE CE2 C Y N 381 PHE CZ C Y N 382 PHE OXT O N N 383 PHE H H N N 384 PHE H2 H N N 385 PHE HA H N N 386 PHE HB2 H N N 387 PHE HB3 H N N 388 PHE HD1 H N N 389 PHE HD2 H N N 390 PHE HE1 H N N 391 PHE HE2 H N N 392 PHE HZ H N N 393 PHE HXT H N N 394 PRO N N N N 395 PRO CA C N S 396 PRO C C N N 397 PRO O O N N 398 PRO CB C N N 399 PRO CG C N N 400 PRO CD C N N 401 PRO OXT O N N 402 PRO H H N N 403 PRO HA H N N 404 PRO HB2 H N N 405 PRO HB3 H N N 406 PRO HG2 H N N 407 PRO HG3 H N N 408 PRO HD2 H N N 409 PRO HD3 H N N 410 PRO HXT H N N 411 SER N N N N 412 SER CA C N S 413 SER C C N N 414 SER O O N N 415 SER CB C N N 416 SER OG O N N 417 SER OXT O N N 418 SER H H N N 419 SER H2 H N N 420 SER HA H N N 421 SER HB2 H N N 422 SER HB3 H N N 423 SER HG H N N 424 SER HXT H N N 425 THR N N N N 426 THR CA C N S 427 THR C C N N 428 THR O O N N 429 THR CB C N R 430 THR OG1 O N N 431 THR CG2 C N N 432 THR OXT O N N 433 THR H H N N 434 THR H2 H N N 435 THR HA H N N 436 THR HB H N N 437 THR HG1 H N N 438 THR HG21 H N N 439 THR HG22 H N N 440 THR HG23 H N N 441 THR HXT H N N 442 TRP N N N N 443 TRP CA C N S 444 TRP C C N N 445 TRP O O N N 446 TRP CB C N N 447 TRP CG C Y N 448 TRP CD1 C Y N 449 TRP CD2 C Y N 450 TRP NE1 N Y N 451 TRP CE2 C Y N 452 TRP CE3 C Y N 453 TRP CZ2 C Y N 454 TRP CZ3 C Y N 455 TRP CH2 C Y N 456 TRP OXT O N N 457 TRP H H N N 458 TRP H2 H N N 459 TRP HA H N N 460 TRP HB2 H N N 461 TRP HB3 H N N 462 TRP HD1 H N N 463 TRP HE1 H N N 464 TRP HE3 H N N 465 TRP HZ2 H N N 466 TRP HZ3 H N N 467 TRP HH2 H N N 468 TRP HXT H N N 469 TYR N N N N 470 TYR CA C N S 471 TYR C C N N 472 TYR O O N N 473 TYR CB C N N 474 TYR CG C Y N 475 TYR CD1 C Y N 476 TYR CD2 C Y N 477 TYR CE1 C Y N 478 TYR CE2 C Y N 479 TYR CZ C Y N 480 TYR OH O N N 481 TYR OXT O N N 482 TYR H H N N 483 TYR H2 H N N 484 TYR HA H N N 485 TYR HB2 H N N 486 TYR HB3 H N N 487 TYR HD1 H N N 488 TYR HD2 H N N 489 TYR HE1 H N N 490 TYR HE2 H N N 491 TYR HH H N N 492 TYR HXT H N N 493 VAL N N N N 494 VAL CA C N S 495 VAL C C N N 496 VAL O O N N 497 VAL CB C N N 498 VAL CG1 C N N 499 VAL CG2 C N N 500 VAL OXT O N N 501 VAL H H N N 502 VAL H2 H N N 503 VAL HA H N N 504 VAL HB H N N 505 VAL HG11 H N N 506 VAL HG12 H N N 507 VAL HG13 H N N 508 VAL HG21 H N N 509 VAL HG22 H N N 510 VAL HG23 H N N 511 VAL HXT H N N 512 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 MET N CA sing N N 346 MET N H sing N N 347 MET N H2 sing N N 348 MET CA C sing N N 349 MET CA CB sing N N 350 MET CA HA sing N N 351 MET C O doub N N 352 MET C OXT sing N N 353 MET CB CG sing N N 354 MET CB HB2 sing N N 355 MET CB HB3 sing N N 356 MET CG SD sing N N 357 MET CG HG2 sing N N 358 MET CG HG3 sing N N 359 MET SD CE sing N N 360 MET CE HE1 sing N N 361 MET CE HE2 sing N N 362 MET CE HE3 sing N N 363 MET OXT HXT sing N N 364 PHE N CA sing N N 365 PHE N H sing N N 366 PHE N H2 sing N N 367 PHE CA C sing N N 368 PHE CA CB sing N N 369 PHE CA HA sing N N 370 PHE C O doub N N 371 PHE C OXT sing N N 372 PHE CB CG sing N N 373 PHE CB HB2 sing N N 374 PHE CB HB3 sing N N 375 PHE CG CD1 doub Y N 376 PHE CG CD2 sing Y N 377 PHE CD1 CE1 sing Y N 378 PHE CD1 HD1 sing N N 379 PHE CD2 CE2 doub Y N 380 PHE CD2 HD2 sing N N 381 PHE CE1 CZ doub Y N 382 PHE CE1 HE1 sing N N 383 PHE CE2 CZ sing Y N 384 PHE CE2 HE2 sing N N 385 PHE CZ HZ sing N N 386 PHE OXT HXT sing N N 387 PRO N CA sing N N 388 PRO N CD sing N N 389 PRO N H sing N N 390 PRO CA C sing N N 391 PRO CA CB sing N N 392 PRO CA HA sing N N 393 PRO C O doub N N 394 PRO C OXT sing N N 395 PRO CB CG sing N N 396 PRO CB HB2 sing N N 397 PRO CB HB3 sing N N 398 PRO CG CD sing N N 399 PRO CG HG2 sing N N 400 PRO CG HG3 sing N N 401 PRO CD HD2 sing N N 402 PRO CD HD3 sing N N 403 PRO OXT HXT sing N N 404 SER N CA sing N N 405 SER N H sing N N 406 SER N H2 sing N N 407 SER CA C sing N N 408 SER CA CB sing N N 409 SER CA HA sing N N 410 SER C O doub N N 411 SER C OXT sing N N 412 SER CB OG sing N N 413 SER CB HB2 sing N N 414 SER CB HB3 sing N N 415 SER OG HG sing N N 416 SER OXT HXT sing N N 417 THR N CA sing N N 418 THR N H sing N N 419 THR N H2 sing N N 420 THR CA C sing N N 421 THR CA CB sing N N 422 THR CA HA sing N N 423 THR C O doub N N 424 THR C OXT sing N N 425 THR CB OG1 sing N N 426 THR CB CG2 sing N N 427 THR CB HB sing N N 428 THR OG1 HG1 sing N N 429 THR CG2 HG21 sing N N 430 THR CG2 HG22 sing N N 431 THR CG2 HG23 sing N N 432 THR OXT HXT sing N N 433 TRP N CA sing N N 434 TRP N H sing N N 435 TRP N H2 sing N N 436 TRP CA C sing N N 437 TRP CA CB sing N N 438 TRP CA HA sing N N 439 TRP C O doub N N 440 TRP C OXT sing N N 441 TRP CB CG sing N N 442 TRP CB HB2 sing N N 443 TRP CB HB3 sing N N 444 TRP CG CD1 doub Y N 445 TRP CG CD2 sing Y N 446 TRP CD1 NE1 sing Y N 447 TRP CD1 HD1 sing N N 448 TRP CD2 CE2 doub Y N 449 TRP CD2 CE3 sing Y N 450 TRP NE1 CE2 sing Y N 451 TRP NE1 HE1 sing N N 452 TRP CE2 CZ2 sing Y N 453 TRP CE3 CZ3 doub Y N 454 TRP CE3 HE3 sing N N 455 TRP CZ2 CH2 doub Y N 456 TRP CZ2 HZ2 sing N N 457 TRP CZ3 CH2 sing Y N 458 TRP CZ3 HZ3 sing N N 459 TRP CH2 HH2 sing N N 460 TRP OXT HXT sing N N 461 TYR N CA sing N N 462 TYR N H sing N N 463 TYR N H2 sing N N 464 TYR CA C sing N N 465 TYR CA CB sing N N 466 TYR CA HA sing N N 467 TYR C O doub N N 468 TYR C OXT sing N N 469 TYR CB CG sing N N 470 TYR CB HB2 sing N N 471 TYR CB HB3 sing N N 472 TYR CG CD1 doub Y N 473 TYR CG CD2 sing Y N 474 TYR CD1 CE1 sing Y N 475 TYR CD1 HD1 sing N N 476 TYR CD2 CE2 doub Y N 477 TYR CD2 HD2 sing N N 478 TYR CE1 CZ doub Y N 479 TYR CE1 HE1 sing N N 480 TYR CE2 CZ sing Y N 481 TYR CE2 HE2 sing N N 482 TYR CZ OH sing N N 483 TYR OH HH sing N N 484 TYR OXT HXT sing N N 485 VAL N CA sing N N 486 VAL N H sing N N 487 VAL N H2 sing N N 488 VAL CA C sing N N 489 VAL CA CB sing N N 490 VAL CA HA sing N N 491 VAL C O doub N N 492 VAL C OXT sing N N 493 VAL CB CG1 sing N N 494 VAL CB CG2 sing N N 495 VAL CB HB sing N N 496 VAL CG1 HG11 sing N N 497 VAL CG1 HG12 sing N N 498 VAL CG1 HG13 sing N N 499 VAL CG2 HG21 sing N N 500 VAL CG2 HG22 sing N N 501 VAL CG2 HG23 sing N N 502 VAL OXT HXT sing N N 503 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3CRO 'double helix' 3CRO 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 20 1_555 0.677 -0.683 0.335 -5.682 -11.521 -13.249 1 A_DA2:DT20_B A 2 ? B 20 ? 20 1 1 A DG 3 1_555 B DC 19 1_555 0.390 -0.503 0.468 -3.583 -8.032 -9.621 2 A_DG3:DC19_B A 3 ? B 19 ? 19 1 1 A DT 4 1_555 B DA 18 1_555 0.241 -0.068 0.634 -6.538 -9.527 -2.815 3 A_DT4:DA18_B A 4 ? B 18 ? 20 1 1 A DA 5 1_555 B DT 17 1_555 -0.437 -0.385 -0.212 -3.532 -8.216 5.437 4 A_DA5:DT17_B A 5 ? B 17 ? 20 1 1 A DC 6 1_555 B DG 16 1_555 1.125 -0.413 0.153 0.855 -13.642 -2.891 5 A_DC6:DG16_B A 6 ? B 16 ? 19 1 1 A DA 7 1_555 B DT 15 1_555 0.005 -0.563 0.019 13.245 -12.807 -5.498 6 A_DA7:DT15_B A 7 ? B 15 ? 20 1 1 A DA 8 1_555 B DT 14 1_555 -0.460 -0.221 -0.333 9.985 -26.139 -8.381 7 A_DA8:DT14_B A 8 ? B 14 ? 20 1 1 A DA 9 1_555 B DT 13 1_555 -0.085 -0.136 -0.024 5.199 -13.099 -0.573 8 A_DA9:DT13_B A 9 ? B 13 ? 20 1 1 A DC 10 1_555 B DG 12 1_555 0.317 -0.099 -1.029 13.258 -17.098 -2.732 9 A_DC10:DG12_B A 10 ? B 12 ? 19 1 1 A DT 11 1_555 B DA 11 1_555 0.290 -0.320 -0.956 -2.719 -14.154 -9.343 10 A_DT11:DA11_B A 11 ? B 11 ? 20 1 1 A DT 12 1_555 B DA 10 1_555 0.672 -0.129 -0.204 -9.116 -19.494 -8.564 11 A_DT12:DA10_B A 12 ? B 10 ? 20 1 1 A DT 13 1_555 B DA 9 1_555 0.324 -0.472 -0.062 -11.132 -29.415 -16.270 12 A_DT13:DA9_B A 13 ? B 9 ? 20 1 1 A DC 14 1_555 B DG 8 1_555 -0.321 -0.267 -0.302 -19.119 -9.001 -8.897 13 A_DC14:DG8_B A 14 ? B 8 ? 19 1 1 A DT 15 1_555 B DA 7 1_555 0.489 -0.015 0.272 -24.578 -18.082 -10.994 14 A_DT15:DA7_B A 15 ? B 7 ? 20 1 1 A DT 16 1_555 B DA 6 1_555 -1.138 -0.192 -0.215 -5.017 -26.181 -5.894 15 A_DT16:DA6_B A 16 ? B 6 ? 20 1 1 A DG 17 1_555 B DC 5 1_555 -1.148 -0.349 -0.222 -4.125 -6.729 -4.424 16 A_DG17:DC5_B A 17 ? B 5 ? 19 1 1 A DT 18 1_555 B DA 4 1_555 -0.828 -0.362 -0.025 12.332 -4.285 -6.115 17 A_DT18:DA4_B A 18 ? B 4 ? 20 1 1 A DA 19 1_555 B DT 3 1_555 -0.870 -0.233 0.168 -4.199 -4.677 -4.821 18 A_DA19:DT3_B A 19 ? B 3 ? 20 1 1 A DT 20 1_555 B DA 2 1_555 0.091 -0.072 -0.753 2.541 -14.027 -5.978 19 A_DT20:DA2_B A 20 ? B 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DT 20 1_555 A DG 3 1_555 B DC 19 1_555 0.239 -0.556 3.258 -1.902 1.822 30.227 -1.424 -0.835 3.199 3.485 3.639 30.338 1 AA_DA2DG3:DC19DT20_BB A 2 ? B 20 ? A 3 ? B 19 ? 1 A DG 3 1_555 B DC 19 1_555 A DT 4 1_555 B DA 18 1_555 0.419 -0.899 3.525 1.578 2.164 32.683 -1.992 -0.451 3.475 3.838 -2.798 32.789 2 AA_DG3DT4:DA18DC19_BB A 3 ? B 19 ? A 4 ? B 18 ? 1 A DT 4 1_555 B DA 18 1_555 A DA 5 1_555 B DT 17 1_555 0.508 -0.224 3.362 3.328 -3.696 35.617 0.185 -0.331 3.399 -6.005 -5.409 35.952 3 AA_DT4DA5:DT17DA18_BB A 4 ? B 18 ? A 5 ? B 17 ? 1 A DA 5 1_555 B DT 17 1_555 A DC 6 1_555 B DG 16 1_555 -1.120 -0.298 3.299 -2.553 4.177 36.490 -1.048 1.422 3.314 6.634 4.054 36.806 4 AA_DA5DC6:DG16DT17_BB A 5 ? B 17 ? A 6 ? B 16 ? 1 A DC 6 1_555 B DG 16 1_555 A DA 7 1_555 B DT 15 1_555 -0.510 -0.846 3.152 -1.742 7.531 22.986 -4.232 0.702 2.768 18.247 4.221 24.234 5 AA_DC6DA7:DT15DG16_BB A 6 ? B 16 ? A 7 ? B 15 ? 1 A DA 7 1_555 B DT 15 1_555 A DA 8 1_555 B DT 14 1_555 -0.109 0.413 3.434 5.531 2.093 34.341 0.355 1.066 3.394 3.512 -9.282 34.831 6 AA_DA7DA8:DT14DT15_BB A 7 ? B 15 ? A 8 ? B 14 ? 1 A DA 8 1_555 B DT 14 1_555 A DA 9 1_555 B DT 13 1_555 0.284 -0.247 3.205 -3.690 2.173 41.956 -0.561 -0.765 3.154 3.026 5.138 42.164 7 AA_DA8DA9:DT13DT14_BB A 8 ? B 14 ? A 9 ? B 13 ? 1 A DA 9 1_555 B DT 13 1_555 A DC 10 1_555 B DG 12 1_555 0.152 -0.292 3.133 7.147 -1.068 37.389 -0.317 0.642 3.116 -1.647 -11.023 38.056 8 AA_DA9DC10:DG12DT13_BB A 9 ? B 13 ? A 10 ? B 12 ? 1 A DC 10 1_555 B DG 12 1_555 A DT 11 1_555 B DA 11 1_555 -0.182 -0.849 3.987 -0.457 5.649 32.660 -2.628 0.227 3.793 9.952 0.806 33.135 9 AA_DC10DT11:DA11DG12_BB A 10 ? B 12 ? A 11 ? B 11 ? 1 A DT 11 1_555 B DA 11 1_555 A DT 12 1_555 B DA 10 1_555 0.025 -0.083 3.519 -2.512 3.690 39.391 -0.586 -0.352 3.490 5.452 3.712 39.633 10 AA_DT11DT12:DA10DA11_BB A 11 ? B 11 ? A 12 ? B 10 ? 1 A DT 12 1_555 B DA 10 1_555 A DT 13 1_555 B DA 9 1_555 -0.386 -0.697 3.173 -0.909 2.289 37.126 -1.387 0.488 3.135 3.590 1.426 37.204 11 AA_DT12DT13:DA9DA10_BB A 12 ? B 10 ? A 13 ? B 9 ? 1 A DT 13 1_555 B DA 9 1_555 A DC 14 1_555 B DG 8 1_555 0.329 -0.376 3.615 -1.095 -5.392 36.773 0.209 -0.678 3.621 -8.488 1.724 37.169 12 AA_DT13DC14:DG8DA9_BB A 13 ? B 9 ? A 14 ? B 8 ? 1 A DC 14 1_555 B DG 8 1_555 A DT 15 1_555 B DA 7 1_555 -0.346 -0.517 3.370 -3.018 1.776 37.770 -1.030 0.135 3.360 2.737 4.650 37.927 13 AA_DC14DT15:DA7DG8_BB A 14 ? B 8 ? A 15 ? B 7 ? 1 A DT 15 1_555 B DA 7 1_555 A DT 16 1_555 B DA 6 1_555 -0.422 0.182 2.657 1.145 -1.410 30.834 0.563 0.972 2.630 -2.648 -2.152 30.886 14 AA_DT15DT16:DA6DA7_BB A 15 ? B 7 ? A 16 ? B 6 ? 1 A DT 16 1_555 B DA 6 1_555 A DG 17 1_555 B DC 5 1_555 0.931 -0.797 3.301 -0.911 13.658 29.778 -3.675 -1.803 2.662 24.982 1.667 32.709 15 AA_DT16DG17:DC5DA6_BB A 16 ? B 6 ? A 17 ? B 5 ? 1 A DG 17 1_555 B DC 5 1_555 A DT 18 1_555 B DA 4 1_555 0.737 -0.461 3.099 -0.505 0.601 30.817 -0.977 -1.480 3.078 1.131 0.950 30.827 16 AA_DG17DT18:DA4DC5_BB A 17 ? B 5 ? A 18 ? B 4 ? 1 A DT 18 1_555 B DA 4 1_555 A DA 19 1_555 B DT 3 1_555 -0.115 -0.780 3.795 -2.565 -2.390 38.894 -0.830 -0.189 3.834 -3.580 3.842 39.045 17 AA_DT18DA19:DT3DA4_BB A 18 ? B 4 ? A 19 ? B 3 ? 1 A DA 19 1_555 B DT 3 1_555 A DT 20 1_555 B DA 2 1_555 -0.270 -0.593 3.141 6.399 -0.492 35.829 -0.885 1.283 3.056 -0.791 -10.300 36.381 18 AA_DA19DT20:DA2DT3_BB A 19 ? B 3 ? A 20 ? B 2 ? # _atom_sites.entry_id 3CRO _atom_sites.fract_transf_matrix[1][1] 0.020325 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007198 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021008 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017194 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_