HEADER TRANSFERASE 11-APR-08 3CTA TITLE CRYSTAL STRUCTURE OF RIBOFLAVIN KINASE FROM THERMOPLASMA ACIDOPHILUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOFLAVIN KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RFK, CTP:RIBOFLAVIN 5'-PHOSPHOTRANSFERASE, CTP-DEPENDENT COMPND 5 RIBOFLAVIN KINASE, FLAVOKINASE; COMPND 6 EC: 2.7.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOPLASMA ACIDOPHILUM DSM 1728; SOURCE 3 ORGANISM_TAXID: 273075; SOURCE 4 STRAIN: DSM 1728 / AMRC-C165 / IFO 15155 / JCM 9062; SOURCE 5 ATCC: 25905; SOURCE 6 GENE: RFK, TA1064; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PET; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, TRANSFERASE, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC, FMN, KINASE, MAGNESIUM, METAL-BINDING, NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BONANNO,M.RUTTER,K.T.BAIN,M.MENDOZA,R.ROMERO,D.SMITH,S.WASSERMAN, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 7 21-FEB-24 3CTA 1 REMARK REVDAT 6 03-FEB-21 3CTA 1 AUTHOR JRNL SEQADV REVDAT 5 14-NOV-18 3CTA 1 AUTHOR REVDAT 4 25-OCT-17 3CTA 1 REMARK REVDAT 3 24-FEB-09 3CTA 1 VERSN REVDAT 2 15-JUL-08 3CTA 1 COMPND AUTHOR KEYWDS REVDAT 1 29-APR-08 3CTA 0 JRNL AUTH J.B.BONANNO,M.RUTTER,K.T.BAIN,M.MENDOZA,R.ROMERO,D.SMITH, JRNL AUTH 2 S.WASSERMAN,J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF RIBOFLAVIN KINASE FROM THERMOPLASMA JRNL TITL 2 ACIDOPHILUM. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 13425 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 673 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 921 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.2980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1424 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 52 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.25000 REMARK 3 B22 (A**2) : 0.34000 REMARK 3 B33 (A**2) : -0.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.245 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.205 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.580 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1441 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1946 ; 1.401 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 182 ; 5.994 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 54 ;38.868 ;23.889 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 253 ;16.037 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;23.689 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 238 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1031 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 925 ; 0.928 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1485 ; 1.757 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 516 ; 2.712 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 461 ; 4.714 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3CTA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047184. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.19 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13460 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 23.122 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : 0.09400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 0.69400 REMARK 200 R SYM FOR SHELL (I) : 0.69400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM BICINE PH 9.0, 10% PEG 6000, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.27200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.27200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.54350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.49350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.54350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.49350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.27200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.54350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.49350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 40.27200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.54350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.49350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE DIMERIC ASSEMBLY OF THE BIOLOGICAL REMARK 300 UNIT THAT IS SHOWN IN REMARK 350 IS PUTATIVE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 77.08700 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 40.27200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 GLU A 2 REMARK 465 THR A 3 REMARK 465 ASP A 4 REMARK 465 GLY A 102 REMARK 465 MET A 103 REMARK 465 GLY A 104 REMARK 465 GLU A 105 REMARK 465 GLY A 106 REMARK 465 ARG A 107 REMARK 465 TYR A 108 REMARK 465 TYR A 109 REMARK 465 VAL A 110 REMARK 465 ALA A 111 REMARK 465 ARG A 112 REMARK 465 LYS A 113 REMARK 465 LEU A 129 REMARK 465 GLY A 130 REMARK 465 THR A 131 REMARK 465 GLU A 161 REMARK 465 ASP A 162 REMARK 465 LYS A 200 REMARK 465 TYR A 201 REMARK 465 LEU A 202 REMARK 465 ARG A 203 REMARK 465 GLU A 204 REMARK 465 GLU A 205 REMARK 465 ILE A 206 REMARK 465 ASN A 207 REMARK 465 LEU A 208 REMARK 465 HIS A 209 REMARK 465 ASP A 210 REMARK 465 GLY A 211 REMARK 465 GLU A 221 REMARK 465 GLY A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 HIS A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 5 CG OD1 OD2 REMARK 470 GLN A 6 CG CD OE1 NE2 REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 62 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 114 CG CD OE1 NE2 REMARK 470 ILE A 116 CG1 CG2 CD1 REMARK 470 ILE A 125 CG1 CG2 CD1 REMARK 470 ILE A 126 CG1 CG2 CD1 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 THR A 160 OG1 CG2 REMARK 470 ARG A 163 CG CD NE CZ NH1 NH2 REMARK 470 THR A 164 OG1 CG2 REMARK 470 GLN A 176 CG CD OE1 NE2 REMARK 470 GLU A 186 CG CD OE1 OE2 REMARK 470 ARG A 187 CG CD NE CZ NH1 NH2 REMARK 470 SER A 198 OG REMARK 470 ASP A 199 OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 19 -126.72 49.58 REMARK 500 SER A 21 -168.10 -79.40 REMARK 500 ASN A 91 55.77 -140.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-10141B RELATED DB: TARGETDB DBREF 3CTA A -1 220 UNP Q9HJA6 RIFK_THEAC 1 220 SEQADV 3CTA SER A 0 UNP Q9HJA6 EXPRESSION TAG SEQADV 3CTA LEU A 1 UNP Q9HJA6 EXPRESSION TAG SEQADV 3CTA GLU A 221 UNP Q9HJA6 EXPRESSION TAG SEQADV 3CTA GLY A 222 UNP Q9HJA6 EXPRESSION TAG SEQADV 3CTA HIS A 223 UNP Q9HJA6 EXPRESSION TAG SEQADV 3CTA HIS A 224 UNP Q9HJA6 EXPRESSION TAG SEQADV 3CTA HIS A 225 UNP Q9HJA6 EXPRESSION TAG SEQADV 3CTA HIS A 226 UNP Q9HJA6 EXPRESSION TAG SEQADV 3CTA HIS A 227 UNP Q9HJA6 EXPRESSION TAG SEQADV 3CTA HIS A 228 UNP Q9HJA6 EXPRESSION TAG SEQRES 1 A 230 MET SER LEU GLU THR ASP ASP GLN TYR TYR ARG ALA ILE SEQRES 2 A 230 LYS LYS ILE LYS GLU ALA ALA GLU ALA SER ASN ARG ALA SEQRES 3 A 230 TYR LEU THR SER SER LYS LEU ALA ASP MET LEU GLY ILE SEQRES 4 A 230 SER GLN GLN SER ALA SER ARG ILE ILE ILE ASP LEU GLU SEQRES 5 A 230 LYS ASN GLY TYR ILE THR ARG THR VAL THR LYS ARG GLY SEQRES 6 A 230 GLN ILE LEU ASN ILE THR GLU LYS GLY LEU ASP VAL LEU SEQRES 7 A 230 TYR THR GLU PHE ALA ASP LEU SER ARG ILE LEU ALA ILE SEQRES 8 A 230 LYS ASN ASN VAL VAL ILE THR GLY THR VAL THR SER GLY SEQRES 9 A 230 MET GLY GLU GLY ARG TYR TYR VAL ALA ARG LYS GLN TYR SEQRES 10 A 230 ILE ILE GLN PHE GLN GLU LYS LEU GLY ILE ILE PRO TYR SEQRES 11 A 230 LEU GLY THR LEU ASN ILE LYS VAL ASP GLN ALA SER LEU SEQRES 12 A 230 PRO GLU LEU ARG LYS ILE ARG GLY PHE ARG GLY ILE HIS SEQRES 13 A 230 ILE GLU GLY PHE LYS THR GLU ASP ARG THR PHE GLY SER SEQRES 14 A 230 VAL LYS ALA PHE PRO ALA LYS ILE GLN ASN ILE PRO CYS SEQRES 15 A 230 PHE VAL ILE MET PRO GLU ARG THR VAL TYR THR ASP VAL SEQRES 16 A 230 ILE GLU ILE ILE SER ASP LYS TYR LEU ARG GLU GLU ILE SEQRES 17 A 230 ASN LEU HIS ASP GLY ASP ARG VAL SER VAL GLU VAL TYR SEQRES 18 A 230 THR GLU GLY HIS HIS HIS HIS HIS HIS FORMUL 2 HOH *52(H2 O) HELIX 1 1 ASP A 5 ALA A 18 1 14 HELIX 2 2 THR A 27 GLY A 36 1 10 HELIX 3 3 SER A 38 ASN A 52 1 15 HELIX 4 4 THR A 69 LEU A 87 1 19 HELIX 5 5 TYR A 115 LEU A 123 1 9 HELIX 6 6 SER A 140 PHE A 150 1 11 SHEET 1 A 3 ARG A 23 TYR A 25 0 SHEET 2 A 3 GLY A 63 ILE A 68 -1 O LEU A 66 N ALA A 24 SHEET 3 A 3 ILE A 55 THR A 60 -1 N THR A 56 O ASN A 67 SHEET 1 B 8 ILE A 153 ILE A 155 0 SHEET 2 B 8 VAL A 168 ILE A 175 -1 O ALA A 170 N ILE A 153 SHEET 3 B 8 ARG A 213 VAL A 218 -1 O GLU A 217 N LYS A 174 SHEET 4 B 8 VAL A 93 VAL A 99 -1 N VAL A 93 O VAL A 218 SHEET 5 B 8 ASN A 133 VAL A 136 -1 O LYS A 135 N THR A 98 SHEET 6 B 8 VAL A 193 ILE A 197 -1 O ILE A 194 N ILE A 134 SHEET 7 B 8 ILE A 178 PRO A 185 -1 N PHE A 181 O ILE A 197 SHEET 8 B 8 VAL A 168 ILE A 175 -1 N ALA A 173 O CYS A 180 CRYST1 77.087 82.987 80.544 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012972 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012050 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012416 0.00000