HEADER OXIDOREDUCTASE 16-APR-08 3CUM OBSLTE 18-AUG-10 3CUM 3OBB TITLE CRYSTAL STRUCTURE OF A POSSIBLE 3-HYDROXYISOBUTYRATE DEHYDROGENASE TITLE 2 FROM PSEUDOMONAS AERUGINOSA PAO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE 3-HYDROXYISOBUTYRATE DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PA01 / 1C / PRS 101 / LMG 12228; SOURCE 5 ATCC: 15692; SOURCE 6 GENE: PA0743; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: P15TV LIC KEYWDS APC60124, 3-HYDROXYISOBUTYRATE DEHYDROGENASE, PSEUDOMONAS AERUGINOSA KEYWDS 2 PA01, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,E.EVDOKIMOVA,M.KUDRITSKA,A.SAVCHENKO,A.M.EDWARDS,A.JOACHIMIAK, AUTHOR 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 3 18-AUG-10 3CUM 1 OBSLTE REVDAT 2 24-FEB-09 3CUM 1 VERSN REVDAT 1 29-APR-08 3CUM 0 SPRSDE 29-APR-08 3CUM 2H78 JRNL AUTH K.TAN,E.EVDOKIMOVA,M.KUDRITSKA,A.SAVCHENKO,A.M.EDWARDS, JRNL AUTH 2 A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A POSSIBLE 3-HYDROXYISOBUTYRATE JRNL TITL 2 DEHYDROGENASE FROM PSEUDOMONAS AERUGINOSA PAO1. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 15696 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 838 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1142 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2139 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 80 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.248 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.203 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.121 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2207 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2985 ; 1.642 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 299 ; 6.805 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;43.560 ;24.458 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 351 ;19.694 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;21.441 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1664 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1080 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1502 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 97 ; 0.126 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 79 ; 0.238 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.111 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1507 ; 0.806 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2309 ; 1.205 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 777 ; 2.385 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 674 ; 3.056 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): -10.4350 24.9670 47.2560 REMARK 3 T TENSOR REMARK 3 T11: 0.2295 T22: -0.0092 REMARK 3 T33: 0.0059 T12: -0.3077 REMARK 3 T13: 0.0843 T23: -0.1021 REMARK 3 L TENSOR REMARK 3 L11: 2.2574 L22: 1.0469 REMARK 3 L33: 7.5517 L12: 0.1622 REMARK 3 L13: -3.0755 L23: -1.4936 REMARK 3 S TENSOR REMARK 3 S11: -0.4584 S12: 0.5455 S13: -0.2842 REMARK 3 S21: -0.0351 S22: 0.1430 S23: 0.1917 REMARK 3 S31: 1.3383 S32: -0.8329 S33: 0.3154 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 167 A 296 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7170 44.1650 50.3650 REMARK 3 T TENSOR REMARK 3 T11: -0.1339 T22: -0.1680 REMARK 3 T33: -0.1454 T12: 0.0115 REMARK 3 T13: 0.0408 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 1.1131 L22: 1.4142 REMARK 3 L33: 1.7283 L12: 0.3098 REMARK 3 L13: 0.1816 L23: -0.0809 REMARK 3 S TENSOR REMARK 3 S11: -0.0247 S12: -0.1071 S13: -0.0001 REMARK 3 S21: 0.2160 S22: 0.1092 S23: 0.0491 REMARK 3 S31: 0.0242 S32: 0.0099 S33: -0.0846 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CUM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-08. REMARK 100 THE RCSB ID CODE IS RCSB047229. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16608 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.500 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 0.74700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, RESOLVE, HKL-2000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4M AMMONIUM ACETATE, 0.1M SODIUM REMARK 280 ACETATE, PH 5.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.24000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.62000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 83.24000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 41.62000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 83.24000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 41.62000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 83.24000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 41.62000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS REMARK 300 EXPERIMENTALLY UNKNOWN. BASED ON THE CRYSTAL STRUCTURE, IT IS REMARK 300 LIKELY A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 46.30550 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 80.20348 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 83.24000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 46.30550 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 80.20348 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 83.24000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 46.30550 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 80.20348 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 83.24000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 297 REMARK 465 GLN A 298 REMARK 465 GLY A 299 REMARK 465 SER A 300 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 64 89.91 -156.80 REMARK 500 ASP A 77 179.53 -58.58 REMARK 500 GLU A 111 -11.05 -43.43 REMARK 500 ARG A 156 -64.36 -126.06 REMARK 500 PRO A 163 -160.52 -73.51 REMARK 500 SER A 209 -164.75 -123.84 REMARK 500 VAL A 218 -5.46 -145.13 REMARK 500 TYR A 219 53.88 -157.55 REMARK 500 THR A 295 34.72 -91.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 57 ALA A 58 -145.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC6014 RELATED DB: TARGETDB DBREF 3CUM A 1 298 UNP Q9I5I6 Q9I5I6_PSEAE 1 298 SEQADV 3CUM GLY A -1 UNP Q9I5I6 EXPRESSION TAG SEQADV 3CUM HIS A 0 UNP Q9I5I6 EXPRESSION TAG SEQADV 3CUM GLY A 299 UNP Q9I5I6 EXPRESSION TAG SEQADV 3CUM SER A 300 UNP Q9I5I6 EXPRESSION TAG SEQRES 1 A 302 GLY HIS MSE LYS GLN ILE ALA PHE ILE GLY LEU GLY HIS SEQRES 2 A 302 MSE GLY ALA PRO MSE ALA THR ASN LEU LEU LYS ALA GLY SEQRES 3 A 302 TYR LEU LEU ASN VAL PHE ASP LEU VAL GLN SER ALA VAL SEQRES 4 A 302 ASP GLY LEU VAL ALA ALA GLY ALA SER ALA ALA ARG SER SEQRES 5 A 302 ALA ARG ASP ALA VAL GLN GLY ALA ASP VAL VAL ILE SER SEQRES 6 A 302 MSE LEU PRO ALA SER GLN HIS VAL GLU GLY LEU TYR LEU SEQRES 7 A 302 ASP ASP ASP GLY LEU LEU ALA HIS ILE ALA PRO GLY THR SEQRES 8 A 302 LEU VAL LEU GLU CYS SER THR ILE ALA PRO THR SER ALA SEQRES 9 A 302 ARG LYS ILE HIS ALA ALA ALA ARG GLU ARG GLY LEU ALA SEQRES 10 A 302 MSE LEU ASP ALA PRO VAL SER GLY GLY THR ALA GLY ALA SEQRES 11 A 302 ALA ALA GLY THR LEU THR PHE MSE VAL GLY GLY ASP ALA SEQRES 12 A 302 GLU ALA LEU GLU LYS ALA ARG PRO LEU PHE GLU ALA MSE SEQRES 13 A 302 GLY ARG ASN ILE PHE HIS ALA GLY PRO ASP GLY ALA GLY SEQRES 14 A 302 GLN VAL ALA LYS VAL CYS ASN ASN GLN LEU LEU ALA VAL SEQRES 15 A 302 LEU MSE ILE GLY THR ALA GLU ALA MSE ALA LEU GLY VAL SEQRES 16 A 302 ALA ASN GLY LEU GLU ALA LYS VAL LEU ALA GLU ILE MSE SEQRES 17 A 302 ARG ARG SER SER GLY GLY ASN TRP ALA LEU GLU VAL TYR SEQRES 18 A 302 ASN PRO TRP PRO GLY VAL MSE GLU ASN ALA PRO ALA SER SEQRES 19 A 302 ARG ASP TYR SER GLY GLY PHE MSE ALA GLN LEU MSE ALA SEQRES 20 A 302 LYS ASP LEU GLY LEU ALA GLN GLU ALA ALA GLN ALA SER SEQRES 21 A 302 ALA SER SER THR PRO MSE GLY SER LEU ALA LEU SER LEU SEQRES 22 A 302 TYR ARG LEU LEU LEU LYS GLN GLY TYR ALA GLU ARG ASP SEQRES 23 A 302 PHE SER VAL VAL GLN LYS LEU PHE ASP PRO THR GLN GLY SEQRES 24 A 302 GLN GLY SER MODRES 3CUM MSE A 1 MET SELENOMETHIONINE MODRES 3CUM MSE A 12 MET SELENOMETHIONINE MODRES 3CUM MSE A 16 MET SELENOMETHIONINE MODRES 3CUM MSE A 64 MET SELENOMETHIONINE MODRES 3CUM MSE A 116 MET SELENOMETHIONINE MODRES 3CUM MSE A 136 MET SELENOMETHIONINE MODRES 3CUM MSE A 154 MET SELENOMETHIONINE MODRES 3CUM MSE A 182 MET SELENOMETHIONINE MODRES 3CUM MSE A 189 MET SELENOMETHIONINE MODRES 3CUM MSE A 206 MET SELENOMETHIONINE MODRES 3CUM MSE A 226 MET SELENOMETHIONINE MODRES 3CUM MSE A 240 MET SELENOMETHIONINE MODRES 3CUM MSE A 244 MET SELENOMETHIONINE MODRES 3CUM MSE A 264 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 12 8 HET MSE A 16 8 HET MSE A 64 8 HET MSE A 116 8 HET MSE A 136 8 HET MSE A 154 8 HET MSE A 182 8 HET MSE A 189 8 HET MSE A 206 8 HET MSE A 226 8 HET MSE A 240 8 HET MSE A 244 8 HET MSE A 264 8 HET ACT A 402 4 HET ACT A 403 4 HET ACT A 404 4 HET EDO A 405 4 HET PEG A 401 7 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 2 ACT 3(C2 H3 O2 1-) FORMUL 5 EDO C2 H6 O2 FORMUL 6 PEG C4 H10 O3 FORMUL 7 HOH *80(H2 O) HELIX 1 1 MSE A 12 ALA A 23 1 12 HELIX 2 2 VAL A 33 ALA A 43 1 11 HELIX 3 3 SER A 50 GLN A 56 1 7 HELIX 4 4 ALA A 67 ASP A 77 1 11 HELIX 5 5 GLY A 80 ILE A 85 1 6 HELIX 6 6 ALA A 98 ARG A 112 1 15 HELIX 7 7 GLY A 124 GLY A 131 1 8 HELIX 8 8 ASP A 140 MSE A 154 1 15 HELIX 9 9 GLY A 165 ASN A 195 1 31 HELIX 10 10 GLU A 198 ARG A 208 1 11 HELIX 11 11 ASN A 213 TYR A 219 1 7 HELIX 12 12 ALA A 229 ASP A 234 5 6 HELIX 13 13 MSE A 240 ALA A 259 1 20 HELIX 14 14 THR A 262 GLN A 278 1 17 HELIX 15 15 ASP A 284 VAL A 287 5 4 HELIX 16 16 VAL A 288 ASP A 293 1 6 SHEET 1 A 6 SER A 46 ALA A 47 0 SHEET 2 A 6 LEU A 26 PHE A 30 1 N LEU A 27 O SER A 46 SHEET 3 A 6 GLN A 3 ILE A 7 1 N ILE A 4 O LEU A 26 SHEET 4 A 6 VAL A 60 SER A 63 1 O ILE A 62 N ALA A 5 SHEET 5 A 6 LEU A 90 GLU A 93 1 O LEU A 92 N VAL A 61 SHEET 6 A 6 ALA A 115 ASP A 118 1 O ALA A 115 N VAL A 91 SHEET 1 B 3 VAL A 121 SER A 122 0 SHEET 2 B 3 LEU A 133 GLY A 138 -1 O THR A 134 N SER A 122 SHEET 3 B 3 GLY A 155 GLY A 162 1 O ARG A 156 N LEU A 133 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C HIS A 11 N MSE A 12 1555 1555 1.33 LINK C MSE A 12 N GLY A 13 1555 1555 1.34 LINK C PRO A 15 N MSE A 16 1555 1555 1.33 LINK C MSE A 16 N ALA A 17 1555 1555 1.34 LINK C SER A 63 N MSE A 64 1555 1555 1.33 LINK C MSE A 64 N LEU A 65 1555 1555 1.33 LINK C ALA A 115 N MSE A 116 1555 1555 1.34 LINK C MSE A 116 N LEU A 117 1555 1555 1.33 LINK C PHE A 135 N MSE A 136 1555 1555 1.33 LINK C MSE A 136 N VAL A 137 1555 1555 1.32 LINK C ALA A 153 N MSE A 154 1555 1555 1.33 LINK C MSE A 154 N GLY A 155 1555 1555 1.33 LINK C LEU A 181 N MSE A 182 1555 1555 1.33 LINK C MSE A 182 N ILE A 183 1555 1555 1.32 LINK C ALA A 188 N MSE A 189 1555 1555 1.33 LINK C MSE A 189 N ALA A 190 1555 1555 1.32 LINK C ILE A 205 N MSE A 206 1555 1555 1.34 LINK C MSE A 206 N ARG A 207 1555 1555 1.34 LINK C VAL A 225 N MSE A 226 1555 1555 1.33 LINK C MSE A 226 N GLU A 227 1555 1555 1.32 LINK C PHE A 239 N MSE A 240 1555 1555 1.33 LINK C MSE A 240 N ALA A 241 1555 1555 1.32 LINK C LEU A 243 N MSE A 244 1555 1555 1.33 LINK C MSE A 244 N ALA A 245 1555 1555 1.34 LINK C PRO A 263 N MSE A 264 1555 1555 1.32 LINK C MSE A 264 N GLY A 265 1555 1555 1.34 SITE 1 AC1 3 HIS A 11 PHE A 239 HOH A 523 SITE 1 AC2 4 ASP A 38 GLN A 242 LEU A 276 HOH A 555 SITE 1 AC3 4 ARG A 233 SER A 236 GLY A 237 GLY A 238 SITE 1 AC4 2 GLY A 10 HIS A 11 SITE 1 AC5 5 GLY A 123 LYS A 171 ASN A 175 HOH A 538 SITE 2 AC5 5 HOH A 570 CRYST1 92.611 92.611 124.860 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010798 0.006234 0.000000 0.00000 SCALE2 0.000000 0.012468 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008009 0.00000 HETATM 1 N MSE A 1 -26.738 26.363 50.807 1.00 65.62 N HETATM 2 CA MSE A 1 -27.226 26.376 49.391 1.00 65.68 C HETATM 3 C MSE A 1 -26.587 25.231 48.607 1.00 63.79 C HETATM 4 O MSE A 1 -27.209 24.196 48.359 1.00 63.76 O HETATM 5 CB MSE A 1 -26.875 27.708 48.722 1.00 65.56 C HETATM 6 CG MSE A 1 -26.846 28.901 49.660 1.00 66.68 C HETATM 7 SE MSE A 1 -26.496 30.535 48.668 0.60 69.54 SE HETATM 8 CE MSE A 1 -28.327 30.862 48.007 1.00 68.61 C