data_3CVW # _entry.id 3CVW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CVW pdb_00003cvw 10.2210/pdb3cvw/pdb NDB PD1118 ? ? RCSB RCSB047275 ? ? WWPDB D_1000047275 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-10-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_conn.pdbx_dist_value' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 16 4 'Structure model' '_struct_ref_seq_dif.details' 17 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3CVW _pdbx_database_status.recvd_initial_deposition_date 2008-04-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3CVU ;Drosophila melanogaster (6-4) photolyase bound to ds DNA with a T-T (6-4) photolesion ; unspecified PDB 3CVV ;Drosophila melanogaster (6-4) photolyase bound to ds DNA with a T-T (6-4) photolesion and F0 cofactor ; unspecified PDB 3CVX ;Drosophila melanogaster (6-4) photolyase H369M mutant bound to ds DNA with a T-T (6-4) photolesion ; unspecified PDB 3CVY 'Drosophila melanogaster (6-4) photolyase bound to repaired ds DNA' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Maul, M.J.' 1 'Barends, T.R.M.' 2 'Glas, A.F.' 3 'Cryle, M.J.' 4 'Schlichting, I.' 5 'Carell, T.' 6 # _citation.id primary _citation.title ;Structure and mechanism of a cofactor f0 accelerated (6-4) photolyase from the fruit fly ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Maul, M.J.' 1 ? primary 'Barends, T.' 2 ? primary 'Glas, A.F.' 3 ? primary 'Cryle, M.J.' 4 ? primary 'Schneider, S.' 5 ? primary 'Domratcheva, T.' 6 ? primary 'Schlichting, I.' 7 ? primary 'Carell, T.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DAP*DCP*DAP*DGP*DCP*DGP*DGP*(64T)P*(5PY)P*DGP*DCP*DAP*DGP*DGP*DT)-3') ; 4652.039 1 ? ? ? 'DNA with (6-4) photolesion' 2 polymer syn ;DNA (5'-D(*DTP*DAP*DCP*DCP*DTP*DGP*DCP*DAP*DAP*DCP*DCP*DGP*DCP*DTP*DG)-3') ; 4529.949 1 ? ? ? ? 3 polymer man RE11660p 62886.098 1 ? H365N ? ? 4 non-polymer syn 'FLAVIN-ADENINE DINUCLEOTIDE' 785.550 1 ? ? ? ? 5 non-polymer syn '1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol' 363.322 1 ? ? ? ? 6 water nat water 18.015 12 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DA)(DC)(DA)(DG)(DC)(DG)(DG)(64T)(5PY)(DG)(DC)(DA)(DG)(DG)(DT)' ACAGCGGTTGCAGGT C ? 2 polydeoxyribonucleotide no no '(DT)(DA)(DC)(DC)(DT)(DG)(DC)(DA)(DA)(DC)(DC)(DG)(DC)(DT)(DG)' TACCTGCAACCGCTG D ? 3 'polypeptide(L)' no no ;MASWSHPQFEKGASTSLYKKAGLMDSQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILDPGILDWMQVG ANRWRFLQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHC SHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEKLKNMPTPPKDEVEQKDSAAYDCPTMKQLVKRPEELGP NKFPGGETEALRRMEESLKDEIWVARFEKPNTAPNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLI GQLMWREFYYTVAAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHNLARHAVACFLTR GDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYPAGCIYEP WKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYKVNREVRTGKEEESSFEEKSET ; ;MASWSHPQFEKGASTSLYKKAGLMDSQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILDPGILDWMQVG ANRWRFLQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHC SHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVPEKLKNMPTPPKDEVEQKDSAAYDCPTMKQLVKRPEELGP NKFPGGETEALRRMEESLKDEIWVARFEKPNTAPNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLI GQLMWREFYYTVAAAEPNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHNLARHAVACFLTR GDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYPAGCIYEP WKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYKVNREVRTGKEEESSFEEKSET ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'FLAVIN-ADENINE DINUCLEOTIDE' FAD 5 '1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol' FO1 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DC n 1 3 DA n 1 4 DG n 1 5 DC n 1 6 DG n 1 7 DG n 1 8 64T n 1 9 5PY n 1 10 DG n 1 11 DC n 1 12 DA n 1 13 DG n 1 14 DG n 1 15 DT n 2 1 DT n 2 2 DA n 2 3 DC n 2 4 DC n 2 5 DT n 2 6 DG n 2 7 DC n 2 8 DA n 2 9 DA n 2 10 DC n 2 11 DC n 2 12 DG n 2 13 DC n 2 14 DT n 2 15 DG n 3 1 MET n 3 2 ALA n 3 3 SER n 3 4 TRP n 3 5 SER n 3 6 HIS n 3 7 PRO n 3 8 GLN n 3 9 PHE n 3 10 GLU n 3 11 LYS n 3 12 GLY n 3 13 ALA n 3 14 SER n 3 15 THR n 3 16 SER n 3 17 LEU n 3 18 TYR n 3 19 LYS n 3 20 LYS n 3 21 ALA n 3 22 GLY n 3 23 LEU n 3 24 MET n 3 25 ASP n 3 26 SER n 3 27 GLN n 3 28 ARG n 3 29 SER n 3 30 THR n 3 31 LEU n 3 32 VAL n 3 33 HIS n 3 34 TRP n 3 35 PHE n 3 36 ARG n 3 37 LYS n 3 38 GLY n 3 39 LEU n 3 40 ARG n 3 41 LEU n 3 42 HIS n 3 43 ASP n 3 44 ASN n 3 45 PRO n 3 46 ALA n 3 47 LEU n 3 48 SER n 3 49 HIS n 3 50 ILE n 3 51 PHE n 3 52 THR n 3 53 ALA n 3 54 ALA n 3 55 ASN n 3 56 ALA n 3 57 ALA n 3 58 PRO n 3 59 GLY n 3 60 ARG n 3 61 TYR n 3 62 PHE n 3 63 VAL n 3 64 ARG n 3 65 PRO n 3 66 ILE n 3 67 PHE n 3 68 ILE n 3 69 LEU n 3 70 ASP n 3 71 PRO n 3 72 GLY n 3 73 ILE n 3 74 LEU n 3 75 ASP n 3 76 TRP n 3 77 MET n 3 78 GLN n 3 79 VAL n 3 80 GLY n 3 81 ALA n 3 82 ASN n 3 83 ARG n 3 84 TRP n 3 85 ARG n 3 86 PHE n 3 87 LEU n 3 88 GLN n 3 89 GLN n 3 90 THR n 3 91 LEU n 3 92 GLU n 3 93 ASP n 3 94 LEU n 3 95 ASP n 3 96 ASN n 3 97 GLN n 3 98 LEU n 3 99 ARG n 3 100 LYS n 3 101 LEU n 3 102 ASN n 3 103 SER n 3 104 ARG n 3 105 LEU n 3 106 PHE n 3 107 VAL n 3 108 VAL n 3 109 ARG n 3 110 GLY n 3 111 LYS n 3 112 PRO n 3 113 ALA n 3 114 GLU n 3 115 VAL n 3 116 PHE n 3 117 PRO n 3 118 ARG n 3 119 ILE n 3 120 PHE n 3 121 LYS n 3 122 SER n 3 123 TRP n 3 124 ARG n 3 125 VAL n 3 126 GLU n 3 127 MET n 3 128 LEU n 3 129 THR n 3 130 PHE n 3 131 GLU n 3 132 THR n 3 133 ASP n 3 134 ILE n 3 135 GLU n 3 136 PRO n 3 137 TYR n 3 138 SER n 3 139 VAL n 3 140 THR n 3 141 ARG n 3 142 ASP n 3 143 ALA n 3 144 ALA n 3 145 VAL n 3 146 GLN n 3 147 LYS n 3 148 LEU n 3 149 ALA n 3 150 LYS n 3 151 ALA n 3 152 GLU n 3 153 GLY n 3 154 VAL n 3 155 ARG n 3 156 VAL n 3 157 GLU n 3 158 THR n 3 159 HIS n 3 160 CYS n 3 161 SER n 3 162 HIS n 3 163 THR n 3 164 ILE n 3 165 TYR n 3 166 ASN n 3 167 PRO n 3 168 GLU n 3 169 LEU n 3 170 VAL n 3 171 ILE n 3 172 ALA n 3 173 LYS n 3 174 ASN n 3 175 LEU n 3 176 GLY n 3 177 LYS n 3 178 ALA n 3 179 PRO n 3 180 ILE n 3 181 THR n 3 182 TYR n 3 183 GLN n 3 184 LYS n 3 185 PHE n 3 186 LEU n 3 187 GLY n 3 188 ILE n 3 189 VAL n 3 190 GLU n 3 191 GLN n 3 192 LEU n 3 193 LYS n 3 194 VAL n 3 195 PRO n 3 196 LYS n 3 197 VAL n 3 198 LEU n 3 199 GLY n 3 200 VAL n 3 201 PRO n 3 202 GLU n 3 203 LYS n 3 204 LEU n 3 205 LYS n 3 206 ASN n 3 207 MET n 3 208 PRO n 3 209 THR n 3 210 PRO n 3 211 PRO n 3 212 LYS n 3 213 ASP n 3 214 GLU n 3 215 VAL n 3 216 GLU n 3 217 GLN n 3 218 LYS n 3 219 ASP n 3 220 SER n 3 221 ALA n 3 222 ALA n 3 223 TYR n 3 224 ASP n 3 225 CYS n 3 226 PRO n 3 227 THR n 3 228 MET n 3 229 LYS n 3 230 GLN n 3 231 LEU n 3 232 VAL n 3 233 LYS n 3 234 ARG n 3 235 PRO n 3 236 GLU n 3 237 GLU n 3 238 LEU n 3 239 GLY n 3 240 PRO n 3 241 ASN n 3 242 LYS n 3 243 PHE n 3 244 PRO n 3 245 GLY n 3 246 GLY n 3 247 GLU n 3 248 THR n 3 249 GLU n 3 250 ALA n 3 251 LEU n 3 252 ARG n 3 253 ARG n 3 254 MET n 3 255 GLU n 3 256 GLU n 3 257 SER n 3 258 LEU n 3 259 LYS n 3 260 ASP n 3 261 GLU n 3 262 ILE n 3 263 TRP n 3 264 VAL n 3 265 ALA n 3 266 ARG n 3 267 PHE n 3 268 GLU n 3 269 LYS n 3 270 PRO n 3 271 ASN n 3 272 THR n 3 273 ALA n 3 274 PRO n 3 275 ASN n 3 276 SER n 3 277 LEU n 3 278 GLU n 3 279 PRO n 3 280 SER n 3 281 THR n 3 282 THR n 3 283 VAL n 3 284 LEU n 3 285 SER n 3 286 PRO n 3 287 TYR n 3 288 LEU n 3 289 LYS n 3 290 PHE n 3 291 GLY n 3 292 CYS n 3 293 LEU n 3 294 SER n 3 295 ALA n 3 296 ARG n 3 297 LEU n 3 298 PHE n 3 299 ASN n 3 300 GLN n 3 301 LYS n 3 302 LEU n 3 303 LYS n 3 304 GLU n 3 305 ILE n 3 306 ILE n 3 307 LYS n 3 308 ARG n 3 309 GLN n 3 310 PRO n 3 311 LYS n 3 312 HIS n 3 313 SER n 3 314 GLN n 3 315 PRO n 3 316 PRO n 3 317 VAL n 3 318 SER n 3 319 LEU n 3 320 ILE n 3 321 GLY n 3 322 GLN n 3 323 LEU n 3 324 MET n 3 325 TRP n 3 326 ARG n 3 327 GLU n 3 328 PHE n 3 329 TYR n 3 330 TYR n 3 331 THR n 3 332 VAL n 3 333 ALA n 3 334 ALA n 3 335 ALA n 3 336 GLU n 3 337 PRO n 3 338 ASN n 3 339 PHE n 3 340 ASP n 3 341 ARG n 3 342 MET n 3 343 LEU n 3 344 GLY n 3 345 ASN n 3 346 VAL n 3 347 TYR n 3 348 CYS n 3 349 MET n 3 350 GLN n 3 351 ILE n 3 352 PRO n 3 353 TRP n 3 354 GLN n 3 355 GLU n 3 356 HIS n 3 357 PRO n 3 358 ASP n 3 359 HIS n 3 360 LEU n 3 361 GLU n 3 362 ALA n 3 363 TRP n 3 364 THR n 3 365 HIS n 3 366 GLY n 3 367 ARG n 3 368 THR n 3 369 GLY n 3 370 TYR n 3 371 PRO n 3 372 PHE n 3 373 ILE n 3 374 ASP n 3 375 ALA n 3 376 ILE n 3 377 MET n 3 378 ARG n 3 379 GLN n 3 380 LEU n 3 381 ARG n 3 382 GLN n 3 383 GLU n 3 384 GLY n 3 385 TRP n 3 386 ILE n 3 387 HIS n 3 388 ASN n 3 389 LEU n 3 390 ALA n 3 391 ARG n 3 392 HIS n 3 393 ALA n 3 394 VAL n 3 395 ALA n 3 396 CYS n 3 397 PHE n 3 398 LEU n 3 399 THR n 3 400 ARG n 3 401 GLY n 3 402 ASP n 3 403 LEU n 3 404 TRP n 3 405 ILE n 3 406 SER n 3 407 TRP n 3 408 GLU n 3 409 GLU n 3 410 GLY n 3 411 GLN n 3 412 ARG n 3 413 VAL n 3 414 PHE n 3 415 GLU n 3 416 GLN n 3 417 LEU n 3 418 LEU n 3 419 LEU n 3 420 ASP n 3 421 GLN n 3 422 ASP n 3 423 TRP n 3 424 ALA n 3 425 LEU n 3 426 ASN n 3 427 ALA n 3 428 GLY n 3 429 ASN n 3 430 TRP n 3 431 MET n 3 432 TRP n 3 433 LEU n 3 434 SER n 3 435 ALA n 3 436 SER n 3 437 ALA n 3 438 PHE n 3 439 PHE n 3 440 HIS n 3 441 GLN n 3 442 TYR n 3 443 PHE n 3 444 ARG n 3 445 VAL n 3 446 TYR n 3 447 SER n 3 448 PRO n 3 449 VAL n 3 450 ALA n 3 451 PHE n 3 452 GLY n 3 453 LYS n 3 454 LYS n 3 455 THR n 3 456 ASP n 3 457 PRO n 3 458 GLN n 3 459 GLY n 3 460 HIS n 3 461 TYR n 3 462 ILE n 3 463 ARG n 3 464 LYS n 3 465 TYR n 3 466 VAL n 3 467 PRO n 3 468 GLU n 3 469 LEU n 3 470 SER n 3 471 LYS n 3 472 TYR n 3 473 PRO n 3 474 ALA n 3 475 GLY n 3 476 CYS n 3 477 ILE n 3 478 TYR n 3 479 GLU n 3 480 PRO n 3 481 TRP n 3 482 LYS n 3 483 ALA n 3 484 SER n 3 485 LEU n 3 486 VAL n 3 487 ASP n 3 488 GLN n 3 489 ARG n 3 490 ALA n 3 491 TYR n 3 492 GLY n 3 493 CYS n 3 494 VAL n 3 495 LEU n 3 496 GLY n 3 497 THR n 3 498 ASP n 3 499 TYR n 3 500 PRO n 3 501 HIS n 3 502 ARG n 3 503 ILE n 3 504 VAL n 3 505 LYS n 3 506 HIS n 3 507 GLU n 3 508 VAL n 3 509 VAL n 3 510 HIS n 3 511 LYS n 3 512 GLU n 3 513 ASN n 3 514 ILE n 3 515 LYS n 3 516 ARG n 3 517 MET n 3 518 GLY n 3 519 ALA n 3 520 ALA n 3 521 TYR n 3 522 LYS n 3 523 VAL n 3 524 ASN n 3 525 ARG n 3 526 GLU n 3 527 VAL n 3 528 ARG n 3 529 THR n 3 530 GLY n 3 531 LYS n 3 532 GLU n 3 533 GLU n 3 534 GLU n 3 535 SER n 3 536 SER n 3 537 PHE n 3 538 GLU n 3 539 GLU n 3 540 LYS n 3 541 SER n 3 542 GLU n 3 543 THR n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene phr64-520 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta-gami pLysS (DE-3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'derived from pDEST007' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5PY 'DNA linking' n "1-(2'-DEOXY-5'-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-5-METHYLPYRIMIDIN-2(1H)-ONE" ? 'C10 H15 N2 O7 P' 306.209 64T 'DNA linking' n "5-HYDROXY-THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H17 N2 O9 P' 340.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 FAD non-polymer . 'FLAVIN-ADENINE DINUCLEOTIDE' ? 'C27 H33 N9 O15 P2' 785.550 FO1 non-polymer . '1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol' 7,8-didemethyl-8-hydroxy-5-deazariboflavin 'C16 H17 N3 O7' 363.322 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA C . n A 1 2 DC 2 2 2 DC DC C . n A 1 3 DA 3 3 3 DA DA C . n A 1 4 DG 4 4 4 DG DG C . n A 1 5 DC 5 5 5 DC DC C . n A 1 6 DG 6 6 6 DG DG C . n A 1 7 DG 7 7 7 DG DG C . n A 1 8 64T 8 8 8 64T TDX C . n A 1 9 5PY 9 9 9 5PY TDY C . n A 1 10 DG 10 10 10 DG DG C . n A 1 11 DC 11 11 11 DC DC C . n A 1 12 DA 12 12 12 DA DA C . n A 1 13 DG 13 13 13 DG DG C . n A 1 14 DG 14 14 14 DG DG C . n A 1 15 DT 15 15 15 DT DT C . n B 2 1 DT 1 1 1 DT DT D . n B 2 2 DA 2 2 2 DA DA D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DC 4 4 4 DC DC D . n B 2 5 DT 5 5 5 DT DT D . n B 2 6 DG 6 6 6 DG DG D . n B 2 7 DC 7 7 7 DC DC D . n B 2 8 DA 8 8 8 DA DA D . n B 2 9 DA 9 9 9 DA DA D . n B 2 10 DC 10 10 10 DC DC D . n B 2 11 DC 11 11 11 DC DC D . n B 2 12 DG 12 12 12 DG DG D . n B 2 13 DC 13 13 13 DC DC D . n B 2 14 DT 14 14 14 DT DT D . n B 2 15 DG 15 15 15 DG DG D . n C 3 1 MET 1 -22 ? ? ? A . n C 3 2 ALA 2 -21 ? ? ? A . n C 3 3 SER 3 -20 ? ? ? A . n C 3 4 TRP 4 -19 ? ? ? A . n C 3 5 SER 5 -18 ? ? ? A . n C 3 6 HIS 6 -17 ? ? ? A . n C 3 7 PRO 7 -16 ? ? ? A . n C 3 8 GLN 8 -15 ? ? ? A . n C 3 9 PHE 9 -14 ? ? ? A . n C 3 10 GLU 10 -13 ? ? ? A . n C 3 11 LYS 11 -12 ? ? ? A . n C 3 12 GLY 12 -11 ? ? ? A . n C 3 13 ALA 13 -10 ? ? ? A . n C 3 14 SER 14 -9 ? ? ? A . n C 3 15 THR 15 -8 ? ? ? A . n C 3 16 SER 16 -7 ? ? ? A . n C 3 17 LEU 17 -6 ? ? ? A . n C 3 18 TYR 18 -5 ? ? ? A . n C 3 19 LYS 19 -4 ? ? ? A . n C 3 20 LYS 20 -3 ? ? ? A . n C 3 21 ALA 21 -2 ? ? ? A . n C 3 22 GLY 22 -1 ? ? ? A . n C 3 23 LEU 23 0 ? ? ? A . n C 3 24 MET 24 1 ? ? ? A . n C 3 25 ASP 25 2 ? ? ? A . n C 3 26 SER 26 3 ? ? ? A . n C 3 27 GLN 27 4 4 GLN GLN A . n C 3 28 ARG 28 5 5 ARG ARG A . n C 3 29 SER 29 6 6 SER SER A . n C 3 30 THR 30 7 7 THR THR A . n C 3 31 LEU 31 8 8 LEU LEU A . n C 3 32 VAL 32 9 9 VAL VAL A . n C 3 33 HIS 33 10 10 HIS HIS A . n C 3 34 TRP 34 11 11 TRP TRP A . n C 3 35 PHE 35 12 12 PHE PHE A . n C 3 36 ARG 36 13 13 ARG ARG A . n C 3 37 LYS 37 14 14 LYS LYS A . n C 3 38 GLY 38 15 15 GLY GLY A . n C 3 39 LEU 39 16 16 LEU LEU A . n C 3 40 ARG 40 17 17 ARG ARG A . n C 3 41 LEU 41 18 18 LEU LEU A . n C 3 42 HIS 42 19 19 HIS HIS A . n C 3 43 ASP 43 20 20 ASP ASP A . n C 3 44 ASN 44 21 21 ASN ASN A . n C 3 45 PRO 45 22 22 PRO PRO A . n C 3 46 ALA 46 23 23 ALA ALA A . n C 3 47 LEU 47 24 24 LEU LEU A . n C 3 48 SER 48 25 25 SER SER A . n C 3 49 HIS 49 26 26 HIS HIS A . n C 3 50 ILE 50 27 27 ILE ILE A . n C 3 51 PHE 51 28 28 PHE PHE A . n C 3 52 THR 52 29 29 THR THR A . n C 3 53 ALA 53 30 30 ALA ALA A . n C 3 54 ALA 54 31 31 ALA ALA A . n C 3 55 ASN 55 32 32 ASN ASN A . n C 3 56 ALA 56 33 33 ALA ALA A . n C 3 57 ALA 57 34 34 ALA ALA A . n C 3 58 PRO 58 35 35 PRO PRO A . n C 3 59 GLY 59 36 36 GLY GLY A . n C 3 60 ARG 60 37 37 ARG ARG A . n C 3 61 TYR 61 38 38 TYR TYR A . n C 3 62 PHE 62 39 39 PHE PHE A . n C 3 63 VAL 63 40 40 VAL VAL A . n C 3 64 ARG 64 41 41 ARG ARG A . n C 3 65 PRO 65 42 42 PRO PRO A . n C 3 66 ILE 66 43 43 ILE ILE A . n C 3 67 PHE 67 44 44 PHE PHE A . n C 3 68 ILE 68 45 45 ILE ILE A . n C 3 69 LEU 69 46 46 LEU LEU A . n C 3 70 ASP 70 47 47 ASP ASP A . n C 3 71 PRO 71 48 48 PRO PRO A . n C 3 72 GLY 72 49 49 GLY GLY A . n C 3 73 ILE 73 50 50 ILE ILE A . n C 3 74 LEU 74 51 51 LEU LEU A . n C 3 75 ASP 75 52 52 ASP ASP A . n C 3 76 TRP 76 53 53 TRP TRP A . n C 3 77 MET 77 54 54 MET MET A . n C 3 78 GLN 78 55 55 GLN GLN A . n C 3 79 VAL 79 56 56 VAL VAL A . n C 3 80 GLY 80 57 57 GLY GLY A . n C 3 81 ALA 81 58 58 ALA ALA A . n C 3 82 ASN 82 59 59 ASN ASN A . n C 3 83 ARG 83 60 60 ARG ARG A . n C 3 84 TRP 84 61 61 TRP TRP A . n C 3 85 ARG 85 62 62 ARG ARG A . n C 3 86 PHE 86 63 63 PHE PHE A . n C 3 87 LEU 87 64 64 LEU LEU A . n C 3 88 GLN 88 65 65 GLN GLN A . n C 3 89 GLN 89 66 66 GLN GLN A . n C 3 90 THR 90 67 67 THR THR A . n C 3 91 LEU 91 68 68 LEU LEU A . n C 3 92 GLU 92 69 69 GLU GLU A . n C 3 93 ASP 93 70 70 ASP ASP A . n C 3 94 LEU 94 71 71 LEU LEU A . n C 3 95 ASP 95 72 72 ASP ASP A . n C 3 96 ASN 96 73 73 ASN ASN A . n C 3 97 GLN 97 74 74 GLN GLN A . n C 3 98 LEU 98 75 75 LEU LEU A . n C 3 99 ARG 99 76 76 ARG ARG A . n C 3 100 LYS 100 77 77 LYS LYS A . n C 3 101 LEU 101 78 78 LEU LEU A . n C 3 102 ASN 102 79 79 ASN ASN A . n C 3 103 SER 103 80 80 SER SER A . n C 3 104 ARG 104 81 81 ARG ARG A . n C 3 105 LEU 105 82 82 LEU LEU A . n C 3 106 PHE 106 83 83 PHE PHE A . n C 3 107 VAL 107 84 84 VAL VAL A . n C 3 108 VAL 108 85 85 VAL VAL A . n C 3 109 ARG 109 86 86 ARG ARG A . n C 3 110 GLY 110 87 87 GLY GLY A . n C 3 111 LYS 111 88 88 LYS LYS A . n C 3 112 PRO 112 89 89 PRO PRO A . n C 3 113 ALA 113 90 90 ALA ALA A . n C 3 114 GLU 114 91 91 GLU GLU A . n C 3 115 VAL 115 92 92 VAL VAL A . n C 3 116 PHE 116 93 93 PHE PHE A . n C 3 117 PRO 117 94 94 PRO PRO A . n C 3 118 ARG 118 95 95 ARG ARG A . n C 3 119 ILE 119 96 96 ILE ILE A . n C 3 120 PHE 120 97 97 PHE PHE A . n C 3 121 LYS 121 98 98 LYS LYS A . n C 3 122 SER 122 99 99 SER SER A . n C 3 123 TRP 123 100 100 TRP TRP A . n C 3 124 ARG 124 101 101 ARG ARG A . n C 3 125 VAL 125 102 102 VAL VAL A . n C 3 126 GLU 126 103 103 GLU GLU A . n C 3 127 MET 127 104 104 MET MET A . n C 3 128 LEU 128 105 105 LEU LEU A . n C 3 129 THR 129 106 106 THR THR A . n C 3 130 PHE 130 107 107 PHE PHE A . n C 3 131 GLU 131 108 108 GLU GLU A . n C 3 132 THR 132 109 109 THR THR A . n C 3 133 ASP 133 110 110 ASP ASP A . n C 3 134 ILE 134 111 111 ILE ILE A . n C 3 135 GLU 135 112 112 GLU GLU A . n C 3 136 PRO 136 113 113 PRO PRO A . n C 3 137 TYR 137 114 114 TYR TYR A . n C 3 138 SER 138 115 115 SER SER A . n C 3 139 VAL 139 116 116 VAL VAL A . n C 3 140 THR 140 117 117 THR THR A . n C 3 141 ARG 141 118 118 ARG ARG A . n C 3 142 ASP 142 119 119 ASP ASP A . n C 3 143 ALA 143 120 120 ALA ALA A . n C 3 144 ALA 144 121 121 ALA ALA A . n C 3 145 VAL 145 122 122 VAL VAL A . n C 3 146 GLN 146 123 123 GLN GLN A . n C 3 147 LYS 147 124 124 LYS LYS A . n C 3 148 LEU 148 125 125 LEU LEU A . n C 3 149 ALA 149 126 126 ALA ALA A . n C 3 150 LYS 150 127 127 LYS LYS A . n C 3 151 ALA 151 128 128 ALA ALA A . n C 3 152 GLU 152 129 129 GLU GLU A . n C 3 153 GLY 153 130 130 GLY GLY A . n C 3 154 VAL 154 131 131 VAL VAL A . n C 3 155 ARG 155 132 132 ARG ARG A . n C 3 156 VAL 156 133 133 VAL VAL A . n C 3 157 GLU 157 134 134 GLU GLU A . n C 3 158 THR 158 135 135 THR THR A . n C 3 159 HIS 159 136 136 HIS HIS A . n C 3 160 CYS 160 137 137 CYS CYS A . n C 3 161 SER 161 138 138 SER SER A . n C 3 162 HIS 162 139 139 HIS HIS A . n C 3 163 THR 163 140 140 THR THR A . n C 3 164 ILE 164 141 141 ILE ILE A . n C 3 165 TYR 165 142 142 TYR TYR A . n C 3 166 ASN 166 143 143 ASN ASN A . n C 3 167 PRO 167 144 144 PRO PRO A . n C 3 168 GLU 168 145 145 GLU GLU A . n C 3 169 LEU 169 146 146 LEU LEU A . n C 3 170 VAL 170 147 147 VAL VAL A . n C 3 171 ILE 171 148 148 ILE ILE A . n C 3 172 ALA 172 149 149 ALA ALA A . n C 3 173 LYS 173 150 150 LYS LYS A . n C 3 174 ASN 174 151 151 ASN ASN A . n C 3 175 LEU 175 152 152 LEU LEU A . n C 3 176 GLY 176 153 153 GLY GLY A . n C 3 177 LYS 177 154 154 LYS LYS A . n C 3 178 ALA 178 155 155 ALA ALA A . n C 3 179 PRO 179 156 156 PRO PRO A . n C 3 180 ILE 180 157 157 ILE ILE A . n C 3 181 THR 181 158 158 THR THR A . n C 3 182 TYR 182 159 159 TYR TYR A . n C 3 183 GLN 183 160 160 GLN GLN A . n C 3 184 LYS 184 161 161 LYS LYS A . n C 3 185 PHE 185 162 162 PHE PHE A . n C 3 186 LEU 186 163 163 LEU LEU A . n C 3 187 GLY 187 164 164 GLY GLY A . n C 3 188 ILE 188 165 165 ILE ILE A . n C 3 189 VAL 189 166 166 VAL VAL A . n C 3 190 GLU 190 167 167 GLU GLU A . n C 3 191 GLN 191 168 168 GLN GLN A . n C 3 192 LEU 192 169 169 LEU LEU A . n C 3 193 LYS 193 170 170 LYS LYS A . n C 3 194 VAL 194 171 171 VAL VAL A . n C 3 195 PRO 195 172 172 PRO PRO A . n C 3 196 LYS 196 173 173 LYS LYS A . n C 3 197 VAL 197 174 174 VAL VAL A . n C 3 198 LEU 198 175 175 LEU LEU A . n C 3 199 GLY 199 176 176 GLY GLY A . n C 3 200 VAL 200 177 177 VAL VAL A . n C 3 201 PRO 201 178 178 PRO PRO A . n C 3 202 GLU 202 179 179 GLU GLU A . n C 3 203 LYS 203 180 180 LYS LYS A . n C 3 204 LEU 204 181 181 LEU LEU A . n C 3 205 LYS 205 182 182 LYS LYS A . n C 3 206 ASN 206 183 183 ASN ASN A . n C 3 207 MET 207 184 184 MET MET A . n C 3 208 PRO 208 185 185 PRO PRO A . n C 3 209 THR 209 186 186 THR THR A . n C 3 210 PRO 210 187 187 PRO PRO A . n C 3 211 PRO 211 188 188 PRO PRO A . n C 3 212 LYS 212 189 189 LYS LYS A . n C 3 213 ASP 213 190 190 ASP ASP A . n C 3 214 GLU 214 191 191 GLU GLU A . n C 3 215 VAL 215 192 192 VAL VAL A . n C 3 216 GLU 216 193 193 GLU GLU A . n C 3 217 GLN 217 194 194 GLN GLN A . n C 3 218 LYS 218 195 195 LYS LYS A . n C 3 219 ASP 219 196 196 ASP ASP A . n C 3 220 SER 220 197 197 SER SER A . n C 3 221 ALA 221 198 198 ALA ALA A . n C 3 222 ALA 222 199 199 ALA ALA A . n C 3 223 TYR 223 200 200 TYR TYR A . n C 3 224 ASP 224 201 201 ASP ASP A . n C 3 225 CYS 225 202 202 CYS CYS A . n C 3 226 PRO 226 203 203 PRO PRO A . n C 3 227 THR 227 204 204 THR THR A . n C 3 228 MET 228 205 205 MET MET A . n C 3 229 LYS 229 206 206 LYS LYS A . n C 3 230 GLN 230 207 207 GLN GLN A . n C 3 231 LEU 231 208 208 LEU LEU A . n C 3 232 VAL 232 209 209 VAL VAL A . n C 3 233 LYS 233 210 210 LYS LYS A . n C 3 234 ARG 234 211 211 ARG ARG A . n C 3 235 PRO 235 212 212 PRO PRO A . n C 3 236 GLU 236 213 213 GLU GLU A . n C 3 237 GLU 237 214 214 GLU GLU A . n C 3 238 LEU 238 215 215 LEU LEU A . n C 3 239 GLY 239 216 216 GLY GLY A . n C 3 240 PRO 240 217 217 PRO PRO A . n C 3 241 ASN 241 218 218 ASN ASN A . n C 3 242 LYS 242 219 219 LYS LYS A . n C 3 243 PHE 243 220 220 PHE PHE A . n C 3 244 PRO 244 221 221 PRO PRO A . n C 3 245 GLY 245 222 222 GLY GLY A . n C 3 246 GLY 246 223 223 GLY GLY A . n C 3 247 GLU 247 224 224 GLU GLU A . n C 3 248 THR 248 225 225 THR THR A . n C 3 249 GLU 249 226 226 GLU GLU A . n C 3 250 ALA 250 227 227 ALA ALA A . n C 3 251 LEU 251 228 228 LEU LEU A . n C 3 252 ARG 252 229 229 ARG ARG A . n C 3 253 ARG 253 230 230 ARG ARG A . n C 3 254 MET 254 231 231 MET MET A . n C 3 255 GLU 255 232 232 GLU GLU A . n C 3 256 GLU 256 233 233 GLU GLU A . n C 3 257 SER 257 234 234 SER SER A . n C 3 258 LEU 258 235 235 LEU LEU A . n C 3 259 LYS 259 236 236 LYS LYS A . n C 3 260 ASP 260 237 237 ASP ASP A . n C 3 261 GLU 261 238 238 GLU GLU A . n C 3 262 ILE 262 239 239 ILE ILE A . n C 3 263 TRP 263 240 240 TRP TRP A . n C 3 264 VAL 264 241 241 VAL VAL A . n C 3 265 ALA 265 242 242 ALA ALA A . n C 3 266 ARG 266 243 243 ARG ARG A . n C 3 267 PHE 267 244 244 PHE PHE A . n C 3 268 GLU 268 245 245 GLU GLU A . n C 3 269 LYS 269 246 246 LYS LYS A . n C 3 270 PRO 270 247 247 PRO PRO A . n C 3 271 ASN 271 248 248 ASN ASN A . n C 3 272 THR 272 249 249 THR THR A . n C 3 273 ALA 273 250 250 ALA ALA A . n C 3 274 PRO 274 251 251 PRO PRO A . n C 3 275 ASN 275 252 252 ASN ASN A . n C 3 276 SER 276 253 253 SER SER A . n C 3 277 LEU 277 254 254 LEU LEU A . n C 3 278 GLU 278 255 255 GLU GLU A . n C 3 279 PRO 279 256 256 PRO PRO A . n C 3 280 SER 280 257 257 SER SER A . n C 3 281 THR 281 258 258 THR THR A . n C 3 282 THR 282 259 259 THR THR A . n C 3 283 VAL 283 260 260 VAL VAL A . n C 3 284 LEU 284 261 261 LEU LEU A . n C 3 285 SER 285 262 262 SER SER A . n C 3 286 PRO 286 263 263 PRO PRO A . n C 3 287 TYR 287 264 264 TYR TYR A . n C 3 288 LEU 288 265 265 LEU LEU A . n C 3 289 LYS 289 266 266 LYS LYS A . n C 3 290 PHE 290 267 267 PHE PHE A . n C 3 291 GLY 291 268 268 GLY GLY A . n C 3 292 CYS 292 269 269 CYS CYS A . n C 3 293 LEU 293 270 270 LEU LEU A . n C 3 294 SER 294 271 271 SER SER A . n C 3 295 ALA 295 272 272 ALA ALA A . n C 3 296 ARG 296 273 273 ARG ARG A . n C 3 297 LEU 297 274 274 LEU LEU A . n C 3 298 PHE 298 275 275 PHE PHE A . n C 3 299 ASN 299 276 276 ASN ASN A . n C 3 300 GLN 300 277 277 GLN GLN A . n C 3 301 LYS 301 278 278 LYS LYS A . n C 3 302 LEU 302 279 279 LEU LEU A . n C 3 303 LYS 303 280 280 LYS LYS A . n C 3 304 GLU 304 281 281 GLU GLU A . n C 3 305 ILE 305 282 282 ILE ILE A . n C 3 306 ILE 306 283 283 ILE ILE A . n C 3 307 LYS 307 284 284 LYS LYS A . n C 3 308 ARG 308 285 285 ARG ARG A . n C 3 309 GLN 309 286 286 GLN GLN A . n C 3 310 PRO 310 287 287 PRO PRO A . n C 3 311 LYS 311 288 288 LYS LYS A . n C 3 312 HIS 312 289 289 HIS HIS A . n C 3 313 SER 313 290 290 SER SER A . n C 3 314 GLN 314 291 291 GLN GLN A . n C 3 315 PRO 315 292 292 PRO PRO A . n C 3 316 PRO 316 293 293 PRO PRO A . n C 3 317 VAL 317 294 294 VAL VAL A . n C 3 318 SER 318 295 295 SER SER A . n C 3 319 LEU 319 296 296 LEU LEU A . n C 3 320 ILE 320 297 297 ILE ILE A . n C 3 321 GLY 321 298 298 GLY GLY A . n C 3 322 GLN 322 299 299 GLN GLN A . n C 3 323 LEU 323 300 300 LEU LEU A . n C 3 324 MET 324 301 301 MET MET A . n C 3 325 TRP 325 302 302 TRP TRP A . n C 3 326 ARG 326 303 303 ARG ARG A . n C 3 327 GLU 327 304 304 GLU GLU A . n C 3 328 PHE 328 305 305 PHE PHE A . n C 3 329 TYR 329 306 306 TYR TYR A . n C 3 330 TYR 330 307 307 TYR TYR A . n C 3 331 THR 331 308 308 THR THR A . n C 3 332 VAL 332 309 309 VAL VAL A . n C 3 333 ALA 333 310 310 ALA ALA A . n C 3 334 ALA 334 311 311 ALA ALA A . n C 3 335 ALA 335 312 312 ALA ALA A . n C 3 336 GLU 336 313 313 GLU GLU A . n C 3 337 PRO 337 314 314 PRO PRO A . n C 3 338 ASN 338 315 315 ASN ASN A . n C 3 339 PHE 339 316 316 PHE PHE A . n C 3 340 ASP 340 317 317 ASP ASP A . n C 3 341 ARG 341 318 318 ARG ARG A . n C 3 342 MET 342 319 319 MET MET A . n C 3 343 LEU 343 320 320 LEU LEU A . n C 3 344 GLY 344 321 321 GLY GLY A . n C 3 345 ASN 345 322 322 ASN ASN A . n C 3 346 VAL 346 323 323 VAL VAL A . n C 3 347 TYR 347 324 324 TYR TYR A . n C 3 348 CYS 348 325 325 CYS CYS A . n C 3 349 MET 349 326 326 MET MET A . n C 3 350 GLN 350 327 327 GLN GLN A . n C 3 351 ILE 351 328 328 ILE ILE A . n C 3 352 PRO 352 329 329 PRO PRO A . n C 3 353 TRP 353 330 330 TRP TRP A . n C 3 354 GLN 354 331 331 GLN GLN A . n C 3 355 GLU 355 332 332 GLU GLU A . n C 3 356 HIS 356 333 333 HIS HIS A . n C 3 357 PRO 357 334 334 PRO PRO A . n C 3 358 ASP 358 335 335 ASP ASP A . n C 3 359 HIS 359 336 336 HIS HIS A . n C 3 360 LEU 360 337 337 LEU LEU A . n C 3 361 GLU 361 338 338 GLU GLU A . n C 3 362 ALA 362 339 339 ALA ALA A . n C 3 363 TRP 363 340 340 TRP TRP A . n C 3 364 THR 364 341 341 THR THR A . n C 3 365 HIS 365 342 342 HIS HIS A . n C 3 366 GLY 366 343 343 GLY GLY A . n C 3 367 ARG 367 344 344 ARG ARG A . n C 3 368 THR 368 345 345 THR THR A . n C 3 369 GLY 369 346 346 GLY GLY A . n C 3 370 TYR 370 347 347 TYR TYR A . n C 3 371 PRO 371 348 348 PRO PRO A . n C 3 372 PHE 372 349 349 PHE PHE A . n C 3 373 ILE 373 350 350 ILE ILE A . n C 3 374 ASP 374 351 351 ASP ASP A . n C 3 375 ALA 375 352 352 ALA ALA A . n C 3 376 ILE 376 353 353 ILE ILE A . n C 3 377 MET 377 354 354 MET MET A . n C 3 378 ARG 378 355 355 ARG ARG A . n C 3 379 GLN 379 356 356 GLN GLN A . n C 3 380 LEU 380 357 357 LEU LEU A . n C 3 381 ARG 381 358 358 ARG ARG A . n C 3 382 GLN 382 359 359 GLN GLN A . n C 3 383 GLU 383 360 360 GLU GLU A . n C 3 384 GLY 384 361 361 GLY GLY A . n C 3 385 TRP 385 362 362 TRP TRP A . n C 3 386 ILE 386 363 363 ILE ILE A . n C 3 387 HIS 387 364 364 HIS HIS A . n C 3 388 ASN 388 365 365 ASN ASN A . n C 3 389 LEU 389 366 366 LEU LEU A . n C 3 390 ALA 390 367 367 ALA ALA A . n C 3 391 ARG 391 368 368 ARG ARG A . n C 3 392 HIS 392 369 369 HIS HIS A . n C 3 393 ALA 393 370 370 ALA ALA A . n C 3 394 VAL 394 371 371 VAL VAL A . n C 3 395 ALA 395 372 372 ALA ALA A . n C 3 396 CYS 396 373 373 CYS CYS A . n C 3 397 PHE 397 374 374 PHE PHE A . n C 3 398 LEU 398 375 375 LEU LEU A . n C 3 399 THR 399 376 376 THR THR A . n C 3 400 ARG 400 377 377 ARG ARG A . n C 3 401 GLY 401 378 378 GLY GLY A . n C 3 402 ASP 402 379 379 ASP ASP A . n C 3 403 LEU 403 380 380 LEU LEU A . n C 3 404 TRP 404 381 381 TRP TRP A . n C 3 405 ILE 405 382 382 ILE ILE A . n C 3 406 SER 406 383 383 SER SER A . n C 3 407 TRP 407 384 384 TRP TRP A . n C 3 408 GLU 408 385 385 GLU GLU A . n C 3 409 GLU 409 386 386 GLU GLU A . n C 3 410 GLY 410 387 387 GLY GLY A . n C 3 411 GLN 411 388 388 GLN GLN A . n C 3 412 ARG 412 389 389 ARG ARG A . n C 3 413 VAL 413 390 390 VAL VAL A . n C 3 414 PHE 414 391 391 PHE PHE A . n C 3 415 GLU 415 392 392 GLU GLU A . n C 3 416 GLN 416 393 393 GLN GLN A . n C 3 417 LEU 417 394 394 LEU LEU A . n C 3 418 LEU 418 395 395 LEU LEU A . n C 3 419 LEU 419 396 396 LEU LEU A . n C 3 420 ASP 420 397 397 ASP ASP A . n C 3 421 GLN 421 398 398 GLN GLN A . n C 3 422 ASP 422 399 399 ASP ASP A . n C 3 423 TRP 423 400 400 TRP TRP A . n C 3 424 ALA 424 401 401 ALA ALA A . n C 3 425 LEU 425 402 402 LEU LEU A . n C 3 426 ASN 426 403 403 ASN ASN A . n C 3 427 ALA 427 404 404 ALA ALA A . n C 3 428 GLY 428 405 405 GLY GLY A . n C 3 429 ASN 429 406 406 ASN ASN A . n C 3 430 TRP 430 407 407 TRP TRP A . n C 3 431 MET 431 408 408 MET MET A . n C 3 432 TRP 432 409 409 TRP TRP A . n C 3 433 LEU 433 410 410 LEU LEU A . n C 3 434 SER 434 411 411 SER SER A . n C 3 435 ALA 435 412 412 ALA ALA A . n C 3 436 SER 436 413 413 SER SER A . n C 3 437 ALA 437 414 414 ALA ALA A . n C 3 438 PHE 438 415 415 PHE PHE A . n C 3 439 PHE 439 416 416 PHE PHE A . n C 3 440 HIS 440 417 417 HIS HIS A . n C 3 441 GLN 441 418 418 GLN GLN A . n C 3 442 TYR 442 419 419 TYR TYR A . n C 3 443 PHE 443 420 420 PHE PHE A . n C 3 444 ARG 444 421 421 ARG ARG A . n C 3 445 VAL 445 422 422 VAL VAL A . n C 3 446 TYR 446 423 423 TYR TYR A . n C 3 447 SER 447 424 424 SER SER A . n C 3 448 PRO 448 425 425 PRO PRO A . n C 3 449 VAL 449 426 426 VAL VAL A . n C 3 450 ALA 450 427 427 ALA ALA A . n C 3 451 PHE 451 428 428 PHE PHE A . n C 3 452 GLY 452 429 429 GLY GLY A . n C 3 453 LYS 453 430 430 LYS LYS A . n C 3 454 LYS 454 431 431 LYS LYS A . n C 3 455 THR 455 432 432 THR THR A . n C 3 456 ASP 456 433 433 ASP ASP A . n C 3 457 PRO 457 434 434 PRO PRO A . n C 3 458 GLN 458 435 435 GLN GLN A . n C 3 459 GLY 459 436 436 GLY GLY A . n C 3 460 HIS 460 437 437 HIS HIS A . n C 3 461 TYR 461 438 438 TYR TYR A . n C 3 462 ILE 462 439 439 ILE ILE A . n C 3 463 ARG 463 440 440 ARG ARG A . n C 3 464 LYS 464 441 441 LYS LYS A . n C 3 465 TYR 465 442 442 TYR TYR A . n C 3 466 VAL 466 443 443 VAL VAL A . n C 3 467 PRO 467 444 444 PRO PRO A . n C 3 468 GLU 468 445 445 GLU GLU A . n C 3 469 LEU 469 446 446 LEU LEU A . n C 3 470 SER 470 447 447 SER SER A . n C 3 471 LYS 471 448 448 LYS LYS A . n C 3 472 TYR 472 449 449 TYR TYR A . n C 3 473 PRO 473 450 450 PRO PRO A . n C 3 474 ALA 474 451 451 ALA ALA A . n C 3 475 GLY 475 452 452 GLY GLY A . n C 3 476 CYS 476 453 453 CYS CYS A . n C 3 477 ILE 477 454 454 ILE ILE A . n C 3 478 TYR 478 455 455 TYR TYR A . n C 3 479 GLU 479 456 456 GLU GLU A . n C 3 480 PRO 480 457 457 PRO PRO A . n C 3 481 TRP 481 458 458 TRP TRP A . n C 3 482 LYS 482 459 459 LYS LYS A . n C 3 483 ALA 483 460 460 ALA ALA A . n C 3 484 SER 484 461 461 SER SER A . n C 3 485 LEU 485 462 462 LEU LEU A . n C 3 486 VAL 486 463 463 VAL VAL A . n C 3 487 ASP 487 464 464 ASP ASP A . n C 3 488 GLN 488 465 465 GLN GLN A . n C 3 489 ARG 489 466 466 ARG ARG A . n C 3 490 ALA 490 467 467 ALA ALA A . n C 3 491 TYR 491 468 468 TYR TYR A . n C 3 492 GLY 492 469 469 GLY GLY A . n C 3 493 CYS 493 470 470 CYS CYS A . n C 3 494 VAL 494 471 471 VAL VAL A . n C 3 495 LEU 495 472 472 LEU LEU A . n C 3 496 GLY 496 473 473 GLY GLY A . n C 3 497 THR 497 474 474 THR THR A . n C 3 498 ASP 498 475 475 ASP ASP A . n C 3 499 TYR 499 476 476 TYR TYR A . n C 3 500 PRO 500 477 477 PRO PRO A . n C 3 501 HIS 501 478 478 HIS HIS A . n C 3 502 ARG 502 479 479 ARG ARG A . n C 3 503 ILE 503 480 480 ILE ILE A . n C 3 504 VAL 504 481 481 VAL VAL A . n C 3 505 LYS 505 482 482 LYS LYS A . n C 3 506 HIS 506 483 483 HIS HIS A . n C 3 507 GLU 507 484 484 GLU GLU A . n C 3 508 VAL 508 485 485 VAL VAL A . n C 3 509 VAL 509 486 486 VAL VAL A . n C 3 510 HIS 510 487 487 HIS HIS A . n C 3 511 LYS 511 488 488 LYS LYS A . n C 3 512 GLU 512 489 489 GLU GLU A . n C 3 513 ASN 513 490 490 ASN ASN A . n C 3 514 ILE 514 491 491 ILE ILE A . n C 3 515 LYS 515 492 492 LYS LYS A . n C 3 516 ARG 516 493 493 ARG ARG A . n C 3 517 MET 517 494 494 MET MET A . n C 3 518 GLY 518 495 495 GLY GLY A . n C 3 519 ALA 519 496 496 ALA ALA A . n C 3 520 ALA 520 497 497 ALA ALA A . n C 3 521 TYR 521 498 498 TYR TYR A . n C 3 522 LYS 522 499 499 LYS LYS A . n C 3 523 VAL 523 500 500 VAL VAL A . n C 3 524 ASN 524 501 501 ASN ASN A . n C 3 525 ARG 525 502 502 ARG ARG A . n C 3 526 GLU 526 503 503 GLU GLU A . n C 3 527 VAL 527 504 504 VAL VAL A . n C 3 528 ARG 528 505 505 ARG ARG A . n C 3 529 THR 529 506 ? ? ? A . n C 3 530 GLY 530 507 ? ? ? A . n C 3 531 LYS 531 508 ? ? ? A . n C 3 532 GLU 532 509 ? ? ? A . n C 3 533 GLU 533 510 ? ? ? A . n C 3 534 GLU 534 511 ? ? ? A . n C 3 535 SER 535 512 ? ? ? A . n C 3 536 SER 536 513 ? ? ? A . n C 3 537 PHE 537 514 ? ? ? A . n C 3 538 GLU 538 515 ? ? ? A . n C 3 539 GLU 539 516 ? ? ? A . n C 3 540 LYS 540 517 ? ? ? A . n C 3 541 SER 541 518 ? ? ? A . n C 3 542 GLU 542 519 ? ? ? A . n C 3 543 THR 543 520 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 FAD 1 521 1 FAD FAD A . E 5 FO1 1 1422 1422 FO1 HDB A . F 6 HOH 1 16 16 HOH HOH C . G 6 HOH 1 1423 1 HOH HOH A . G 6 HOH 2 1424 2 HOH HOH A . G 6 HOH 3 1425 3 HOH HOH A . G 6 HOH 4 1426 4 HOH HOH A . G 6 HOH 5 1427 6 HOH HOH A . G 6 HOH 6 1428 7 HOH HOH A . G 6 HOH 7 1429 8 HOH HOH A . G 6 HOH 8 1430 9 HOH HOH A . G 6 HOH 9 1431 11 HOH HOH A . G 6 HOH 10 1432 12 HOH HOH A . G 6 HOH 11 1433 15 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MAR345 'data collection' software ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 REFMAC phasing . ? 5 # _cell.entry_id 3CVW _cell.length_a 86.470 _cell.length_b 89.510 _cell.length_c 89.340 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CVW _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3CVW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.40 _exptl_crystal.density_percent_sol 48.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.6 _exptl_crystal_grow.pdbx_details '15-25% PEG1500, 0.1 M MIB, pH 8.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'MIB buffer' ? ? ? 1 2 2 'MIB buffer' ? ? ? 1 3 2 PEG1500 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2008-02-22 _diffrn_detector.details 'Dynamically bendable mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97895 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97895 # _reflns.entry_id 3CVW _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 3.2 _reflns.d_resolution_low 20 _reflns.number_all 10625 _reflns.number_obs 10625 _reflns.percent_possible_obs 89.2 _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.8 _reflns.B_iso_Wilson_estimate 65.5 _reflns.pdbx_redundancy 5.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.2 _reflns_shell.d_res_low 3.3 _reflns_shell.percent_possible_all 52.2 _reflns_shell.Rmerge_I_obs 0.308 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 526 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CVW _refine.ls_number_reflns_obs 10463 _refine.ls_number_reflns_all 10463 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.87 _refine.ls_d_res_high 3.20 _refine.ls_percent_reflns_obs 93.00 _refine.ls_R_factor_obs 0.27526 _refine.ls_R_factor_all 0.27526 _refine.ls_R_factor_R_work 0.27241 _refine.ls_R_factor_R_free 0.3291 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 549 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.860 _refine.correlation_coeff_Fo_to_Fc_free 0.792 _refine.B_iso_mean 49.849 _refine.aniso_B[1][1] -3.23 _refine.aniso_B[2][2] -1.04 _refine.aniso_B[3][3] 4.27 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.745 _refine.overall_SU_ML 0.594 _refine.overall_SU_B 35.355 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4117 _refine_hist.pdbx_number_atoms_nucleic_acid 609 _refine_hist.pdbx_number_atoms_ligand 79 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 4817 _refine_hist.d_res_high 3.20 _refine_hist.d_res_low 19.87 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.022 ? 5008 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.881 2.126 ? 6934 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.166 5.000 ? 501 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.890 23.058 ? 206 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.632 15.000 ? 725 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.565 15.000 ? 35 'X-RAY DIFFRACTION' ? r_chiral_restr 0.054 0.200 ? 725 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.000 0.020 ? 3625 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.152 0.200 ? 2305 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.294 0.200 ? 3342 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.114 0.200 ? 135 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.098 0.200 ? 33 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.067 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.200 _refine_ls_shell.d_res_low 3.281 _refine_ls_shell.number_reflns_R_work 457 _refine_ls_shell.R_factor_R_work 0.346 _refine_ls_shell.percent_reflns_obs 59.56 _refine_ls_shell.R_factor_R_free 0.367 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 29 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3CVW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3CVW _struct.title 'Drosophila melanogaster (6-4) photolyase H365N mutant bound to ds DNA with a T-T (6-4) photolesion and cofactor F0' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CVW _struct_keywords.pdbx_keywords Lyase/DNA _struct_keywords.text 'DNA repair, Lyase-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q8SXK5_DROME Q8SXK5 3 ;MDSQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILDPGILDWMQVGANRWRFLQQTLEDLDNQLRKLNS RLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHCSHTIYNPELVIAKNLGKAPITYQ KFLGIVEQLKVPKVLGVPEKLKNMPTPPKDEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIW VARFEKPNTAPNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTVAAAEPNFDRML GNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRVFEQLLLDQDW ALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYPAGCIYEPWKASLVDQRAYGCVLGTDYPHRI VKHEVVHKENIKRMGAAYKVNREVRTGKEEESSFEEKSET ; 1 ? 2 PDB 3CVW 3CVW 1 ACAGCGGTTGCAGGT ? ? 3 PDB 3CVW 3CVW 2 TACCTGCAACCGCTG ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CVW A 24 ? 543 ? Q8SXK5 1 ? 520 ? 1 520 2 2 3CVW C 1 ? 15 ? 3CVW 1 ? 15 ? 1 15 3 3 3CVW D 1 ? 15 ? 3CVW 1 ? 15 ? 1 15 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CVW MET A 1 ? UNP Q8SXK5 ? ? 'expression tag' -22 1 1 3CVW ALA A 2 ? UNP Q8SXK5 ? ? 'expression tag' -21 2 1 3CVW SER A 3 ? UNP Q8SXK5 ? ? 'expression tag' -20 3 1 3CVW TRP A 4 ? UNP Q8SXK5 ? ? 'expression tag' -19 4 1 3CVW SER A 5 ? UNP Q8SXK5 ? ? 'expression tag' -18 5 1 3CVW HIS A 6 ? UNP Q8SXK5 ? ? 'expression tag' -17 6 1 3CVW PRO A 7 ? UNP Q8SXK5 ? ? 'expression tag' -16 7 1 3CVW GLN A 8 ? UNP Q8SXK5 ? ? 'expression tag' -15 8 1 3CVW PHE A 9 ? UNP Q8SXK5 ? ? 'expression tag' -14 9 1 3CVW GLU A 10 ? UNP Q8SXK5 ? ? 'expression tag' -13 10 1 3CVW LYS A 11 ? UNP Q8SXK5 ? ? 'expression tag' -12 11 1 3CVW GLY A 12 ? UNP Q8SXK5 ? ? 'expression tag' -11 12 1 3CVW ALA A 13 ? UNP Q8SXK5 ? ? 'expression tag' -10 13 1 3CVW SER A 14 ? UNP Q8SXK5 ? ? 'expression tag' -9 14 1 3CVW THR A 15 ? UNP Q8SXK5 ? ? 'expression tag' -8 15 1 3CVW SER A 16 ? UNP Q8SXK5 ? ? 'expression tag' -7 16 1 3CVW LEU A 17 ? UNP Q8SXK5 ? ? 'expression tag' -6 17 1 3CVW TYR A 18 ? UNP Q8SXK5 ? ? 'expression tag' -5 18 1 3CVW LYS A 19 ? UNP Q8SXK5 ? ? 'expression tag' -4 19 1 3CVW LYS A 20 ? UNP Q8SXK5 ? ? 'expression tag' -3 20 1 3CVW ALA A 21 ? UNP Q8SXK5 ? ? 'expression tag' -2 21 1 3CVW GLY A 22 ? UNP Q8SXK5 ? ? 'expression tag' -1 22 1 3CVW LEU A 23 ? UNP Q8SXK5 ? ? 'expression tag' 0 23 1 3CVW ASN A 388 ? UNP Q8SXK5 HIS 365 'engineered mutation' 365 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5680 ? 1 MORE -20 ? 1 'SSA (A^2)' 24910 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN C 44 ? ALA C 57 ? ASN A 21 ALA A 34 1 ? 14 HELX_P HELX_P2 2 GLY C 72 ? MET C 77 ? GLY A 49 MET A 54 1 ? 6 HELX_P HELX_P3 3 GLY C 80 ? LYS C 100 ? GLY A 57 LYS A 77 1 ? 21 HELX_P HELX_P4 4 LYS C 111 ? ARG C 124 ? LYS A 88 ARG A 101 1 ? 14 HELX_P HELX_P5 5 GLU C 135 ? GLU C 152 ? GLU A 112 GLU A 129 1 ? 18 HELX_P HELX_P6 6 ASN C 166 ? ASN C 174 ? ASN A 143 ASN A 151 1 ? 9 HELX_P HELX_P7 7 THR C 181 ? GLU C 190 ? THR A 158 GLU A 167 1 ? 10 HELX_P HELX_P8 8 ASP C 213 ? ASP C 219 ? ASP A 190 ASP A 196 1 ? 7 HELX_P HELX_P9 9 THR C 227 ? VAL C 232 ? THR A 204 VAL A 209 1 ? 6 HELX_P HELX_P10 10 ARG C 234 ? LEU C 238 ? ARG A 211 LEU A 215 5 ? 5 HELX_P HELX_P11 11 GLY C 246 ? LEU C 258 ? GLY A 223 LEU A 235 1 ? 13 HELX_P HELX_P12 12 ASP C 260 ? ARG C 266 ? ASP A 237 ARG A 243 1 ? 7 HELX_P HELX_P13 13 GLU C 268 ? THR C 272 ? GLU A 245 THR A 249 5 ? 5 HELX_P HELX_P14 14 LEU C 284 ? PHE C 290 ? LEU A 261 PHE A 267 1 ? 7 HELX_P HELX_P15 15 SER C 294 ? ARG C 308 ? SER A 271 ARG A 285 1 ? 15 HELX_P HELX_P16 16 SER C 318 ? GLU C 336 ? SER A 295 GLU A 313 1 ? 19 HELX_P HELX_P17 17 HIS C 356 ? HIS C 365 ? HIS A 333 HIS A 342 1 ? 10 HELX_P HELX_P18 18 TYR C 370 ? GLU C 383 ? TYR A 347 GLU A 360 1 ? 14 HELX_P HELX_P19 19 HIS C 387 ? THR C 399 ? HIS A 364 THR A 376 1 ? 13 HELX_P HELX_P20 20 SER C 406 ? LEU C 418 ? SER A 383 LEU A 395 1 ? 13 HELX_P HELX_P21 21 ASP C 422 ? SER C 434 ? ASP A 399 SER A 411 1 ? 13 HELX_P HELX_P22 22 GLY C 459 ? VAL C 466 ? GLY A 436 VAL A 443 1 ? 8 HELX_P HELX_P23 23 PRO C 467 ? SER C 470 ? PRO A 444 SER A 447 5 ? 4 HELX_P HELX_P24 24 GLU C 479 ? ALA C 483 ? GLU A 456 ALA A 460 5 ? 5 HELX_P HELX_P25 25 SER C 484 ? TYR C 491 ? SER A 461 TYR A 468 1 ? 8 HELX_P HELX_P26 26 LYS C 505 ? ARG C 528 ? LYS A 482 ARG A 505 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 7 "O3'" ? ? ? 1_555 A 64T 8 P ? ? C DG 7 C 64T 8 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale2 covale both ? A 64T 8 "O3'" ? ? ? 1_555 A 5PY 9 P ? ? C 64T 8 C 5PY 9 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale3 covale none ? A 64T 8 C6 ? ? ? 1_555 A 5PY 9 C4 ? ? C 64T 8 C 5PY 9 1_555 ? ? ? ? ? ? ? 1.528 ? ? covale4 covale both ? A 5PY 9 "O3'" ? ? ? 1_555 A DG 10 P ? ? C 5PY 9 C DG 10 1_555 ? ? ? ? ? ? ? 1.600 ? ? hydrog1 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 15 O6 ? ? C DC 2 D DG 15 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 14 N3 ? ? C DA 3 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 14 O4 ? ? C DA 3 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 13 N3 ? ? C DG 4 D DC 13 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog5 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 12 N1 ? ? C DC 5 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 12 O6 ? ? C DC 5 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 12 N2 ? ? C DC 5 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 10 N4 ? ? C DG 6 D DC 10 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog9 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 11 N3 ? ? C DG 6 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 11 O2 ? ? C DG 6 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 11 N4 ? ? C DG 6 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 10 N3 ? ? C DG 7 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 10 O2 ? ? C DG 7 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 10 N4 ? ? C DG 7 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 7 O2 ? ? C DG 10 D DC 7 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog16 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 6 N1 ? ? C DC 11 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 6 O6 ? ? C DC 11 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 6 N2 ? ? C DC 11 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 5 N3 ? ? C DA 12 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 5 O4 ? ? C DA 12 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 4 N3 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 4 O2 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 4 N4 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 3 N3 ? ? C DG 14 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 3 O2 ? ? C DG 14 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 3 N4 ? ? C DG 14 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 2 N1 ? ? C DT 15 D DA 2 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 315 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 292 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 316 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 293 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.04 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE C 106 ? ARG C 109 ? PHE A 83 ARG A 86 A 2 TYR C 61 ? LEU C 69 ? TYR A 38 LEU A 46 A 3 SER C 29 ? PHE C 35 ? SER A 6 PHE A 12 A 4 VAL C 125 ? PHE C 130 ? VAL A 102 PHE A 107 A 5 ARG C 155 ? VAL C 156 ? ARG A 132 VAL A 133 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL C 108 ? O VAL A 85 N LEU C 69 ? N LEU A 46 A 2 3 O ILE C 66 ? O ILE A 43 N PHE C 35 ? N PHE A 12 A 3 4 N TRP C 34 ? N TRP A 11 O THR C 129 ? O THR A 106 A 4 5 N GLU C 126 ? N GLU A 103 O ARG C 155 ? O ARG A 132 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FAD 521 ? 22 'BINDING SITE FOR RESIDUE FAD A 521' AC2 Software A FO1 1422 ? 13 'BINDING SITE FOR RESIDUE FO1 A 1422' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 PHE C 267 ? PHE A 244 . ? 1_555 ? 2 AC1 22 LYS C 269 ? LYS A 246 . ? 1_555 ? 3 AC1 22 THR C 281 ? THR A 258 . ? 1_555 ? 4 AC1 22 THR C 282 ? THR A 259 . ? 1_555 ? 5 AC1 22 LEU C 284 ? LEU A 261 . ? 1_555 ? 6 AC1 22 SER C 285 ? SER A 262 . ? 1_555 ? 7 AC1 22 LEU C 288 ? LEU A 265 . ? 1_555 ? 8 AC1 22 GLN C 322 ? GLN A 299 . ? 1_555 ? 9 AC1 22 TRP C 325 ? TRP A 302 . ? 1_555 ? 10 AC1 22 ARG C 326 ? ARG A 303 . ? 1_555 ? 11 AC1 22 TYR C 329 ? TYR A 306 . ? 1_555 ? 12 AC1 22 TRP C 385 ? TRP A 362 . ? 1_555 ? 13 AC1 22 ASN C 388 ? ASN A 365 . ? 1_555 ? 14 AC1 22 ARG C 391 ? ARG A 368 . ? 1_555 ? 15 AC1 22 HIS C 392 ? HIS A 369 . ? 1_555 ? 16 AC1 22 ASP C 420 ? ASP A 397 . ? 1_555 ? 17 AC1 22 GLN C 421 ? GLN A 398 . ? 1_555 ? 18 AC1 22 ASP C 422 ? ASP A 399 . ? 1_555 ? 19 AC1 22 LEU C 425 ? LEU A 402 . ? 1_555 ? 20 AC1 22 ASN C 426 ? ASN A 403 . ? 1_555 ? 21 AC1 22 ASN C 429 ? ASN A 406 . ? 1_555 ? 22 AC1 22 TRP C 430 ? TRP A 407 . ? 1_555 ? 23 AC2 13 ARG C 36 ? ARG A 13 . ? 1_555 ? 24 AC2 13 LYS C 37 ? LYS A 14 . ? 1_555 ? 25 AC2 13 PHE C 67 ? PHE A 44 . ? 1_555 ? 26 AC2 13 ILE C 68 ? ILE A 45 . ? 1_555 ? 27 AC2 13 LEU C 69 ? LEU A 46 . ? 1_555 ? 28 AC2 13 ASP C 70 ? ASP A 47 . ? 1_555 ? 29 AC2 13 ILE C 73 ? ILE A 50 . ? 1_555 ? 30 AC2 13 MET C 77 ? MET A 54 . ? 1_555 ? 31 AC2 13 ARG C 83 ? ARG A 60 . ? 1_555 ? 32 AC2 13 ASP C 133 ? ASP A 110 . ? 1_555 ? 33 AC2 13 GLU C 135 ? GLU A 112 . ? 1_555 ? 34 AC2 13 ARG C 141 ? ARG A 118 . ? 1_555 ? 35 AC2 13 LYS C 289 ? LYS A 266 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DC 2 ? ? "C1'" C DC 2 ? ? N1 C DC 2 ? ? 110.76 108.30 2.46 0.30 N 2 1 "O4'" C DG 13 ? ? "C1'" C DG 13 ? ? N9 C DG 13 ? ? 111.91 108.30 3.61 0.30 N 3 1 "O4'" C DG 14 ? ? "C4'" C DG 14 ? ? "C3'" C DG 14 ? ? 101.96 104.50 -2.54 0.40 N 4 1 "O4'" C DG 14 ? ? "C1'" C DG 14 ? ? N9 C DG 14 ? ? 110.98 108.30 2.68 0.30 N 5 1 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 110.13 108.30 1.83 0.30 N 6 1 "O4'" D DT 1 ? ? "C1'" D DT 1 ? ? N1 D DT 1 ? ? 110.26 108.30 1.96 0.30 N 7 1 "O4'" D DC 3 ? ? "C1'" D DC 3 ? ? N1 D DC 3 ? ? 112.79 108.30 4.49 0.30 N 8 1 "O4'" D DC 4 ? ? "C1'" D DC 4 ? ? N1 D DC 4 ? ? 111.23 108.30 2.93 0.30 N 9 1 "O4'" D DT 5 ? ? "C1'" D DT 5 ? ? N1 D DT 5 ? ? 110.67 108.30 2.37 0.30 N 10 1 "O4'" D DA 9 ? ? "C4'" D DA 9 ? ? "C3'" D DA 9 ? ? 101.98 104.50 -2.52 0.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 13 ? ? -138.56 -78.52 2 1 ASN A 79 ? ? 59.06 15.95 3 1 SER A 80 ? ? -117.21 -151.44 4 1 ARG A 101 ? ? 63.48 72.60 5 1 ASN A 151 ? ? -101.07 41.88 6 1 GLN A 168 ? ? -98.37 35.79 7 1 ASP A 190 ? ? -78.42 -169.15 8 1 ALA A 198 ? ? -93.79 35.12 9 1 ASN A 315 ? ? -95.74 34.01 10 1 PRO A 329 ? ? -69.88 87.29 11 1 HIS A 333 ? ? -162.44 80.58 12 1 THR A 376 ? ? -92.77 -121.84 13 1 ASP A 379 ? ? -125.15 -66.51 14 1 GLN A 398 ? ? -47.91 105.30 15 1 PHE A 415 ? ? 62.30 -56.13 16 1 VAL A 443 ? ? -119.54 76.40 17 1 CYS A 453 ? ? -152.86 28.64 18 1 THR A 474 ? ? -107.62 -68.44 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 64T 8 C 64T 8 ? DT "5-HYDROXY-THYMIDINE-5'-MONOPHOSPHATE" 2 A 5PY 9 C 5PY 9 ? DT ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -22 ? C MET 1 2 1 Y 1 A ALA -21 ? C ALA 2 3 1 Y 1 A SER -20 ? C SER 3 4 1 Y 1 A TRP -19 ? C TRP 4 5 1 Y 1 A SER -18 ? C SER 5 6 1 Y 1 A HIS -17 ? C HIS 6 7 1 Y 1 A PRO -16 ? C PRO 7 8 1 Y 1 A GLN -15 ? C GLN 8 9 1 Y 1 A PHE -14 ? C PHE 9 10 1 Y 1 A GLU -13 ? C GLU 10 11 1 Y 1 A LYS -12 ? C LYS 11 12 1 Y 1 A GLY -11 ? C GLY 12 13 1 Y 1 A ALA -10 ? C ALA 13 14 1 Y 1 A SER -9 ? C SER 14 15 1 Y 1 A THR -8 ? C THR 15 16 1 Y 1 A SER -7 ? C SER 16 17 1 Y 1 A LEU -6 ? C LEU 17 18 1 Y 1 A TYR -5 ? C TYR 18 19 1 Y 1 A LYS -4 ? C LYS 19 20 1 Y 1 A LYS -3 ? C LYS 20 21 1 Y 1 A ALA -2 ? C ALA 21 22 1 Y 1 A GLY -1 ? C GLY 22 23 1 Y 1 A LEU 0 ? C LEU 23 24 1 Y 1 A MET 1 ? C MET 24 25 1 Y 1 A ASP 2 ? C ASP 25 26 1 Y 1 A SER 3 ? C SER 26 27 1 Y 1 A THR 506 ? C THR 529 28 1 Y 1 A GLY 507 ? C GLY 530 29 1 Y 1 A LYS 508 ? C LYS 531 30 1 Y 1 A GLU 509 ? C GLU 532 31 1 Y 1 A GLU 510 ? C GLU 533 32 1 Y 1 A GLU 511 ? C GLU 534 33 1 Y 1 A SER 512 ? C SER 535 34 1 Y 1 A SER 513 ? C SER 536 35 1 Y 1 A PHE 514 ? C PHE 537 36 1 Y 1 A GLU 515 ? C GLU 538 37 1 Y 1 A GLU 516 ? C GLU 539 38 1 Y 1 A LYS 517 ? C LYS 540 39 1 Y 1 A SER 518 ? C SER 541 40 1 Y 1 A GLU 519 ? C GLU 542 41 1 Y 1 A THR 520 ? C THR 543 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5PY P P N N 1 5PY OP2 O N N 2 5PY OP1 O N N 3 5PY "O5'" O N N 4 5PY "C5'" C N N 5 5PY "C4'" C N R 6 5PY "O4'" O N N 7 5PY "C1'" C N R 8 5PY N1 N N N 9 5PY C2 C N N 10 5PY O2 O N N 11 5PY N3 N N N 12 5PY C4 C N N 13 5PY C5 C N N 14 5PY C5M C N N 15 5PY C6 C N N 16 5PY "C2'" C N N 17 5PY "C3'" C N S 18 5PY "O3'" O N N 19 5PY OP3 O N N 20 5PY H71 H N N 21 5PY H72 H N N 22 5PY H73 H N N 23 5PY H4 H N N 24 5PY H6 H N N 25 5PY "H1'" H N N 26 5PY "H2'" H N N 27 5PY "H2''" H N N 28 5PY "H3'" H N N 29 5PY "HO3'" H N N 30 5PY "H4'" H N N 31 5PY "H5'" H N N 32 5PY "H5''" H N N 33 5PY HOP2 H N N 34 5PY HOP3 H N N 35 64T P P N N 36 64T OP1 O N N 37 64T OP2 O N N 38 64T "O5'" O N N 39 64T "C5'" C N N 40 64T "C4'" C N R 41 64T "O4'" O N N 42 64T "C3'" C N S 43 64T "O3'" O N N 44 64T "C2'" C N N 45 64T "C1'" C N R 46 64T N1 N N N 47 64T C2 C N N 48 64T O2 O N N 49 64T N3 N N N 50 64T C4 C N N 51 64T O4 O N N 52 64T C5 C N R 53 64T C5M C N N 54 64T O5 O N N 55 64T C6 C N N 56 64T OP3 O N N 57 64T HOP2 H N N 58 64T "H5'" H N N 59 64T "H5''" H N N 60 64T "H4'" H N N 61 64T "H3'" H N N 62 64T "HO3'" H N N 63 64T "H2'" H N N 64 64T "H2''" H N N 65 64T "H1'" H N N 66 64T H3 H N N 67 64T H71 H N N 68 64T H72 H N N 69 64T H73 H N N 70 64T HO5 H N N 71 64T H61 H N N 72 64T H62 H N N 73 64T HOP3 H N N 74 ALA N N N N 75 ALA CA C N S 76 ALA C C N N 77 ALA O O N N 78 ALA CB C N N 79 ALA OXT O N N 80 ALA H H N N 81 ALA H2 H N N 82 ALA HA H N N 83 ALA HB1 H N N 84 ALA HB2 H N N 85 ALA HB3 H N N 86 ALA HXT H N N 87 ARG N N N N 88 ARG CA C N S 89 ARG C C N N 90 ARG O O N N 91 ARG CB C N N 92 ARG CG C N N 93 ARG CD C N N 94 ARG NE N N N 95 ARG CZ C N N 96 ARG NH1 N N N 97 ARG NH2 N N N 98 ARG OXT O N N 99 ARG H H N N 100 ARG H2 H N N 101 ARG HA H N N 102 ARG HB2 H N N 103 ARG HB3 H N N 104 ARG HG2 H N N 105 ARG HG3 H N N 106 ARG HD2 H N N 107 ARG HD3 H N N 108 ARG HE H N N 109 ARG HH11 H N N 110 ARG HH12 H N N 111 ARG HH21 H N N 112 ARG HH22 H N N 113 ARG HXT H N N 114 ASN N N N N 115 ASN CA C N S 116 ASN C C N N 117 ASN O O N N 118 ASN CB C N N 119 ASN CG C N N 120 ASN OD1 O N N 121 ASN ND2 N N N 122 ASN OXT O N N 123 ASN H H N N 124 ASN H2 H N N 125 ASN HA H N N 126 ASN HB2 H N N 127 ASN HB3 H N N 128 ASN HD21 H N N 129 ASN HD22 H N N 130 ASN HXT H N N 131 ASP N N N N 132 ASP CA C N S 133 ASP C C N N 134 ASP O O N N 135 ASP CB C N N 136 ASP CG C N N 137 ASP OD1 O N N 138 ASP OD2 O N N 139 ASP OXT O N N 140 ASP H H N N 141 ASP H2 H N N 142 ASP HA H N N 143 ASP HB2 H N N 144 ASP HB3 H N N 145 ASP HD2 H N N 146 ASP HXT H N N 147 CYS N N N N 148 CYS CA C N R 149 CYS C C N N 150 CYS O O N N 151 CYS CB C N N 152 CYS SG S N N 153 CYS OXT O N N 154 CYS H H N N 155 CYS H2 H N N 156 CYS HA H N N 157 CYS HB2 H N N 158 CYS HB3 H N N 159 CYS HG H N N 160 CYS HXT H N N 161 DA OP3 O N N 162 DA P P N N 163 DA OP1 O N N 164 DA OP2 O N N 165 DA "O5'" O N N 166 DA "C5'" C N N 167 DA "C4'" C N R 168 DA "O4'" O N N 169 DA "C3'" C N S 170 DA "O3'" O N N 171 DA "C2'" C N N 172 DA "C1'" C N R 173 DA N9 N Y N 174 DA C8 C Y N 175 DA N7 N Y N 176 DA C5 C Y N 177 DA C6 C Y N 178 DA N6 N N N 179 DA N1 N Y N 180 DA C2 C Y N 181 DA N3 N Y N 182 DA C4 C Y N 183 DA HOP3 H N N 184 DA HOP2 H N N 185 DA "H5'" H N N 186 DA "H5''" H N N 187 DA "H4'" H N N 188 DA "H3'" H N N 189 DA "HO3'" H N N 190 DA "H2'" H N N 191 DA "H2''" H N N 192 DA "H1'" H N N 193 DA H8 H N N 194 DA H61 H N N 195 DA H62 H N N 196 DA H2 H N N 197 DC OP3 O N N 198 DC P P N N 199 DC OP1 O N N 200 DC OP2 O N N 201 DC "O5'" O N N 202 DC "C5'" C N N 203 DC "C4'" C N R 204 DC "O4'" O N N 205 DC "C3'" C N S 206 DC "O3'" O N N 207 DC "C2'" C N N 208 DC "C1'" C N R 209 DC N1 N N N 210 DC C2 C N N 211 DC O2 O N N 212 DC N3 N N N 213 DC C4 C N N 214 DC N4 N N N 215 DC C5 C N N 216 DC C6 C N N 217 DC HOP3 H N N 218 DC HOP2 H N N 219 DC "H5'" H N N 220 DC "H5''" H N N 221 DC "H4'" H N N 222 DC "H3'" H N N 223 DC "HO3'" H N N 224 DC "H2'" H N N 225 DC "H2''" H N N 226 DC "H1'" H N N 227 DC H41 H N N 228 DC H42 H N N 229 DC H5 H N N 230 DC H6 H N N 231 DG OP3 O N N 232 DG P P N N 233 DG OP1 O N N 234 DG OP2 O N N 235 DG "O5'" O N N 236 DG "C5'" C N N 237 DG "C4'" C N R 238 DG "O4'" O N N 239 DG "C3'" C N S 240 DG "O3'" O N N 241 DG "C2'" C N N 242 DG "C1'" C N R 243 DG N9 N Y N 244 DG C8 C Y N 245 DG N7 N Y N 246 DG C5 C Y N 247 DG C6 C N N 248 DG O6 O N N 249 DG N1 N N N 250 DG C2 C N N 251 DG N2 N N N 252 DG N3 N N N 253 DG C4 C Y N 254 DG HOP3 H N N 255 DG HOP2 H N N 256 DG "H5'" H N N 257 DG "H5''" H N N 258 DG "H4'" H N N 259 DG "H3'" H N N 260 DG "HO3'" H N N 261 DG "H2'" H N N 262 DG "H2''" H N N 263 DG "H1'" H N N 264 DG H8 H N N 265 DG H1 H N N 266 DG H21 H N N 267 DG H22 H N N 268 DT OP3 O N N 269 DT P P N N 270 DT OP1 O N N 271 DT OP2 O N N 272 DT "O5'" O N N 273 DT "C5'" C N N 274 DT "C4'" C N R 275 DT "O4'" O N N 276 DT "C3'" C N S 277 DT "O3'" O N N 278 DT "C2'" C N N 279 DT "C1'" C N R 280 DT N1 N N N 281 DT C2 C N N 282 DT O2 O N N 283 DT N3 N N N 284 DT C4 C N N 285 DT O4 O N N 286 DT C5 C N N 287 DT C7 C N N 288 DT C6 C N N 289 DT HOP3 H N N 290 DT HOP2 H N N 291 DT "H5'" H N N 292 DT "H5''" H N N 293 DT "H4'" H N N 294 DT "H3'" H N N 295 DT "HO3'" H N N 296 DT "H2'" H N N 297 DT "H2''" H N N 298 DT "H1'" H N N 299 DT H3 H N N 300 DT H71 H N N 301 DT H72 H N N 302 DT H73 H N N 303 DT H6 H N N 304 FAD PA P N R 305 FAD O1A O N N 306 FAD O2A O N N 307 FAD O5B O N N 308 FAD C5B C N N 309 FAD C4B C N R 310 FAD O4B O N N 311 FAD C3B C N S 312 FAD O3B O N N 313 FAD C2B C N R 314 FAD O2B O N N 315 FAD C1B C N R 316 FAD N9A N Y N 317 FAD C8A C Y N 318 FAD N7A N Y N 319 FAD C5A C Y N 320 FAD C6A C Y N 321 FAD N6A N N N 322 FAD N1A N Y N 323 FAD C2A C Y N 324 FAD N3A N Y N 325 FAD C4A C Y N 326 FAD N1 N N N 327 FAD C2 C N N 328 FAD O2 O N N 329 FAD N3 N N N 330 FAD C4 C N N 331 FAD O4 O N N 332 FAD C4X C N N 333 FAD N5 N N N 334 FAD C5X C Y N 335 FAD C6 C Y N 336 FAD C7 C Y N 337 FAD C7M C N N 338 FAD C8 C Y N 339 FAD C8M C N N 340 FAD C9 C Y N 341 FAD C9A C Y N 342 FAD N10 N N N 343 FAD C10 C N N 344 FAD "C1'" C N N 345 FAD "C2'" C N S 346 FAD "O2'" O N N 347 FAD "C3'" C N S 348 FAD "O3'" O N N 349 FAD "C4'" C N R 350 FAD "O4'" O N N 351 FAD "C5'" C N N 352 FAD "O5'" O N N 353 FAD P P N R 354 FAD O1P O N N 355 FAD O2P O N N 356 FAD O3P O N N 357 FAD HOA2 H N N 358 FAD H51A H N N 359 FAD H52A H N N 360 FAD H4B H N N 361 FAD H3B H N N 362 FAD HO3A H N N 363 FAD H2B H N N 364 FAD HO2A H N N 365 FAD H1B H N N 366 FAD H8A H N N 367 FAD H61A H N N 368 FAD H62A H N N 369 FAD H2A H N N 370 FAD HN3 H N N 371 FAD H6 H N N 372 FAD HM71 H N N 373 FAD HM72 H N N 374 FAD HM73 H N N 375 FAD HM81 H N N 376 FAD HM82 H N N 377 FAD HM83 H N N 378 FAD H9 H N N 379 FAD "H1'1" H N N 380 FAD "H1'2" H N N 381 FAD "H2'" H N N 382 FAD "HO2'" H N N 383 FAD "H3'" H N N 384 FAD "HO3'" H N N 385 FAD "H4'" H N N 386 FAD "HO4'" H N N 387 FAD "H5'1" H N N 388 FAD "H5'2" H N N 389 FAD HOP2 H N N 390 FO1 N1 N N N 391 FO1 C1 C N N 392 FO1 O1 O N N 393 FO1 N2 N N N 394 FO1 C2 C N N 395 FO1 O2 O N N 396 FO1 C3 C N N 397 FO1 C4 C N N 398 FO1 C5 C Y N 399 FO1 C6 C Y N 400 FO1 C7 C Y N 401 FO1 C9 C Y N 402 FO1 O10 O N N 403 FO1 C11 C Y N 404 FO1 C12 C Y N 405 FO1 N3 N N N 406 FO1 C13 C N N 407 FO1 C14 C N N 408 FO1 C15 C N S 409 FO1 O3 O N N 410 FO1 C16 C N S 411 FO1 O4 O N N 412 FO1 C17 C N R 413 FO1 O5 O N N 414 FO1 C18 C N N 415 FO1 O6 O N N 416 FO1 HN3 H N N 417 FO1 HC6 H N N 418 FO1 HC82 H N N 419 FO1 HC9 H N N 420 FO1 HC11 H N N 421 FO1 HC12 H N N 422 FO1 "HC2'" H N N 423 FO1 "HO2'" H N N 424 FO1 "HC3'" H N N 425 FO1 "HO3'" H N N 426 FO1 "HC4'" H N N 427 FO1 "HO4'" H N N 428 FO1 HC51 H N N 429 FO1 HC52 H N N 430 FO1 "HO5'" H N N 431 FO1 H21 H N N 432 FO1 HC7 H N N 433 GLN N N N N 434 GLN CA C N S 435 GLN C C N N 436 GLN O O N N 437 GLN CB C N N 438 GLN CG C N N 439 GLN CD C N N 440 GLN OE1 O N N 441 GLN NE2 N N N 442 GLN OXT O N N 443 GLN H H N N 444 GLN H2 H N N 445 GLN HA H N N 446 GLN HB2 H N N 447 GLN HB3 H N N 448 GLN HG2 H N N 449 GLN HG3 H N N 450 GLN HE21 H N N 451 GLN HE22 H N N 452 GLN HXT H N N 453 GLU N N N N 454 GLU CA C N S 455 GLU C C N N 456 GLU O O N N 457 GLU CB C N N 458 GLU CG C N N 459 GLU CD C N N 460 GLU OE1 O N N 461 GLU OE2 O N N 462 GLU OXT O N N 463 GLU H H N N 464 GLU H2 H N N 465 GLU HA H N N 466 GLU HB2 H N N 467 GLU HB3 H N N 468 GLU HG2 H N N 469 GLU HG3 H N N 470 GLU HE2 H N N 471 GLU HXT H N N 472 GLY N N N N 473 GLY CA C N N 474 GLY C C N N 475 GLY O O N N 476 GLY OXT O N N 477 GLY H H N N 478 GLY H2 H N N 479 GLY HA2 H N N 480 GLY HA3 H N N 481 GLY HXT H N N 482 HIS N N N N 483 HIS CA C N S 484 HIS C C N N 485 HIS O O N N 486 HIS CB C N N 487 HIS CG C Y N 488 HIS ND1 N Y N 489 HIS CD2 C Y N 490 HIS CE1 C Y N 491 HIS NE2 N Y N 492 HIS OXT O N N 493 HIS H H N N 494 HIS H2 H N N 495 HIS HA H N N 496 HIS HB2 H N N 497 HIS HB3 H N N 498 HIS HD1 H N N 499 HIS HD2 H N N 500 HIS HE1 H N N 501 HIS HE2 H N N 502 HIS HXT H N N 503 HOH O O N N 504 HOH H1 H N N 505 HOH H2 H N N 506 ILE N N N N 507 ILE CA C N S 508 ILE C C N N 509 ILE O O N N 510 ILE CB C N S 511 ILE CG1 C N N 512 ILE CG2 C N N 513 ILE CD1 C N N 514 ILE OXT O N N 515 ILE H H N N 516 ILE H2 H N N 517 ILE HA H N N 518 ILE HB H N N 519 ILE HG12 H N N 520 ILE HG13 H N N 521 ILE HG21 H N N 522 ILE HG22 H N N 523 ILE HG23 H N N 524 ILE HD11 H N N 525 ILE HD12 H N N 526 ILE HD13 H N N 527 ILE HXT H N N 528 LEU N N N N 529 LEU CA C N S 530 LEU C C N N 531 LEU O O N N 532 LEU CB C N N 533 LEU CG C N N 534 LEU CD1 C N N 535 LEU CD2 C N N 536 LEU OXT O N N 537 LEU H H N N 538 LEU H2 H N N 539 LEU HA H N N 540 LEU HB2 H N N 541 LEU HB3 H N N 542 LEU HG H N N 543 LEU HD11 H N N 544 LEU HD12 H N N 545 LEU HD13 H N N 546 LEU HD21 H N N 547 LEU HD22 H N N 548 LEU HD23 H N N 549 LEU HXT H N N 550 LYS N N N N 551 LYS CA C N S 552 LYS C C N N 553 LYS O O N N 554 LYS CB C N N 555 LYS CG C N N 556 LYS CD C N N 557 LYS CE C N N 558 LYS NZ N N N 559 LYS OXT O N N 560 LYS H H N N 561 LYS H2 H N N 562 LYS HA H N N 563 LYS HB2 H N N 564 LYS HB3 H N N 565 LYS HG2 H N N 566 LYS HG3 H N N 567 LYS HD2 H N N 568 LYS HD3 H N N 569 LYS HE2 H N N 570 LYS HE3 H N N 571 LYS HZ1 H N N 572 LYS HZ2 H N N 573 LYS HZ3 H N N 574 LYS HXT H N N 575 MET N N N N 576 MET CA C N S 577 MET C C N N 578 MET O O N N 579 MET CB C N N 580 MET CG C N N 581 MET SD S N N 582 MET CE C N N 583 MET OXT O N N 584 MET H H N N 585 MET H2 H N N 586 MET HA H N N 587 MET HB2 H N N 588 MET HB3 H N N 589 MET HG2 H N N 590 MET HG3 H N N 591 MET HE1 H N N 592 MET HE2 H N N 593 MET HE3 H N N 594 MET HXT H N N 595 PHE N N N N 596 PHE CA C N S 597 PHE C C N N 598 PHE O O N N 599 PHE CB C N N 600 PHE CG C Y N 601 PHE CD1 C Y N 602 PHE CD2 C Y N 603 PHE CE1 C Y N 604 PHE CE2 C Y N 605 PHE CZ C Y N 606 PHE OXT O N N 607 PHE H H N N 608 PHE H2 H N N 609 PHE HA H N N 610 PHE HB2 H N N 611 PHE HB3 H N N 612 PHE HD1 H N N 613 PHE HD2 H N N 614 PHE HE1 H N N 615 PHE HE2 H N N 616 PHE HZ H N N 617 PHE HXT H N N 618 PRO N N N N 619 PRO CA C N S 620 PRO C C N N 621 PRO O O N N 622 PRO CB C N N 623 PRO CG C N N 624 PRO CD C N N 625 PRO OXT O N N 626 PRO H H N N 627 PRO HA H N N 628 PRO HB2 H N N 629 PRO HB3 H N N 630 PRO HG2 H N N 631 PRO HG3 H N N 632 PRO HD2 H N N 633 PRO HD3 H N N 634 PRO HXT H N N 635 SER N N N N 636 SER CA C N S 637 SER C C N N 638 SER O O N N 639 SER CB C N N 640 SER OG O N N 641 SER OXT O N N 642 SER H H N N 643 SER H2 H N N 644 SER HA H N N 645 SER HB2 H N N 646 SER HB3 H N N 647 SER HG H N N 648 SER HXT H N N 649 THR N N N N 650 THR CA C N S 651 THR C C N N 652 THR O O N N 653 THR CB C N R 654 THR OG1 O N N 655 THR CG2 C N N 656 THR OXT O N N 657 THR H H N N 658 THR H2 H N N 659 THR HA H N N 660 THR HB H N N 661 THR HG1 H N N 662 THR HG21 H N N 663 THR HG22 H N N 664 THR HG23 H N N 665 THR HXT H N N 666 TRP N N N N 667 TRP CA C N S 668 TRP C C N N 669 TRP O O N N 670 TRP CB C N N 671 TRP CG C Y N 672 TRP CD1 C Y N 673 TRP CD2 C Y N 674 TRP NE1 N Y N 675 TRP CE2 C Y N 676 TRP CE3 C Y N 677 TRP CZ2 C Y N 678 TRP CZ3 C Y N 679 TRP CH2 C Y N 680 TRP OXT O N N 681 TRP H H N N 682 TRP H2 H N N 683 TRP HA H N N 684 TRP HB2 H N N 685 TRP HB3 H N N 686 TRP HD1 H N N 687 TRP HE1 H N N 688 TRP HE3 H N N 689 TRP HZ2 H N N 690 TRP HZ3 H N N 691 TRP HH2 H N N 692 TRP HXT H N N 693 TYR N N N N 694 TYR CA C N S 695 TYR C C N N 696 TYR O O N N 697 TYR CB C N N 698 TYR CG C Y N 699 TYR CD1 C Y N 700 TYR CD2 C Y N 701 TYR CE1 C Y N 702 TYR CE2 C Y N 703 TYR CZ C Y N 704 TYR OH O N N 705 TYR OXT O N N 706 TYR H H N N 707 TYR H2 H N N 708 TYR HA H N N 709 TYR HB2 H N N 710 TYR HB3 H N N 711 TYR HD1 H N N 712 TYR HD2 H N N 713 TYR HE1 H N N 714 TYR HE2 H N N 715 TYR HH H N N 716 TYR HXT H N N 717 VAL N N N N 718 VAL CA C N S 719 VAL C C N N 720 VAL O O N N 721 VAL CB C N N 722 VAL CG1 C N N 723 VAL CG2 C N N 724 VAL OXT O N N 725 VAL H H N N 726 VAL H2 H N N 727 VAL HA H N N 728 VAL HB H N N 729 VAL HG11 H N N 730 VAL HG12 H N N 731 VAL HG13 H N N 732 VAL HG21 H N N 733 VAL HG22 H N N 734 VAL HG23 H N N 735 VAL HXT H N N 736 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5PY P "O5'" sing N N 1 5PY P OP2 sing N N 2 5PY P OP3 sing N N 3 5PY P OP1 doub N N 4 5PY OP2 HOP2 sing N N 5 5PY "O5'" "C5'" sing N N 6 5PY "C5'" "C4'" sing N N 7 5PY "C5'" "H5'" sing N N 8 5PY "C5'" "H5''" sing N N 9 5PY "C4'" "C3'" sing N N 10 5PY "C4'" "O4'" sing N N 11 5PY "C4'" "H4'" sing N N 12 5PY "O4'" "C1'" sing N N 13 5PY "C1'" N1 sing N N 14 5PY "C1'" "C2'" sing N N 15 5PY "C1'" "H1'" sing N N 16 5PY N1 C2 sing N N 17 5PY N1 C6 sing N N 18 5PY C2 N3 sing N N 19 5PY C2 O2 doub N N 20 5PY N3 C4 doub N N 21 5PY C4 C5 sing N N 22 5PY C4 H4 sing N N 23 5PY C5 C5M sing N N 24 5PY C5 C6 doub N N 25 5PY C5M H71 sing N N 26 5PY C5M H72 sing N N 27 5PY C5M H73 sing N N 28 5PY C6 H6 sing N N 29 5PY "C2'" "C3'" sing N N 30 5PY "C2'" "H2'" sing N N 31 5PY "C2'" "H2''" sing N N 32 5PY "C3'" "O3'" sing N N 33 5PY "C3'" "H3'" sing N N 34 5PY "O3'" "HO3'" sing N N 35 5PY OP3 HOP3 sing N N 36 64T P OP1 doub N N 37 64T P OP2 sing N N 38 64T P "O5'" sing N N 39 64T P OP3 sing N N 40 64T OP2 HOP2 sing N N 41 64T "O5'" "C5'" sing N N 42 64T "C5'" "C4'" sing N N 43 64T "C5'" "H5'" sing N N 44 64T "C5'" "H5''" sing N N 45 64T "C4'" "O4'" sing N N 46 64T "C4'" "C3'" sing N N 47 64T "C4'" "H4'" sing N N 48 64T "O4'" "C1'" sing N N 49 64T "C3'" "O3'" sing N N 50 64T "C3'" "C2'" sing N N 51 64T "C3'" "H3'" sing N N 52 64T "O3'" "HO3'" sing N N 53 64T "C2'" "C1'" sing N N 54 64T "C2'" "H2'" sing N N 55 64T "C2'" "H2''" sing N N 56 64T "C1'" N1 sing N N 57 64T "C1'" "H1'" sing N N 58 64T N1 C2 sing N N 59 64T N1 C6 sing N N 60 64T C2 O2 doub N N 61 64T C2 N3 sing N N 62 64T N3 C4 sing N N 63 64T N3 H3 sing N N 64 64T C4 O4 doub N N 65 64T C4 C5 sing N N 66 64T C5 C5M sing N N 67 64T C5 O5 sing N N 68 64T C5 C6 sing N N 69 64T C5M H71 sing N N 70 64T C5M H72 sing N N 71 64T C5M H73 sing N N 72 64T O5 HO5 sing N N 73 64T C6 H61 sing N N 74 64T C6 H62 sing N N 75 64T OP3 HOP3 sing N N 76 ALA N CA sing N N 77 ALA N H sing N N 78 ALA N H2 sing N N 79 ALA CA C sing N N 80 ALA CA CB sing N N 81 ALA CA HA sing N N 82 ALA C O doub N N 83 ALA C OXT sing N N 84 ALA CB HB1 sing N N 85 ALA CB HB2 sing N N 86 ALA CB HB3 sing N N 87 ALA OXT HXT sing N N 88 ARG N CA sing N N 89 ARG N H sing N N 90 ARG N H2 sing N N 91 ARG CA C sing N N 92 ARG CA CB sing N N 93 ARG CA HA sing N N 94 ARG C O doub N N 95 ARG C OXT sing N N 96 ARG CB CG sing N N 97 ARG CB HB2 sing N N 98 ARG CB HB3 sing N N 99 ARG CG CD sing N N 100 ARG CG HG2 sing N N 101 ARG CG HG3 sing N N 102 ARG CD NE sing N N 103 ARG CD HD2 sing N N 104 ARG CD HD3 sing N N 105 ARG NE CZ sing N N 106 ARG NE HE sing N N 107 ARG CZ NH1 sing N N 108 ARG CZ NH2 doub N N 109 ARG NH1 HH11 sing N N 110 ARG NH1 HH12 sing N N 111 ARG NH2 HH21 sing N N 112 ARG NH2 HH22 sing N N 113 ARG OXT HXT sing N N 114 ASN N CA sing N N 115 ASN N H sing N N 116 ASN N H2 sing N N 117 ASN CA C sing N N 118 ASN CA CB sing N N 119 ASN CA HA sing N N 120 ASN C O doub N N 121 ASN C OXT sing N N 122 ASN CB CG sing N N 123 ASN CB HB2 sing N N 124 ASN CB HB3 sing N N 125 ASN CG OD1 doub N N 126 ASN CG ND2 sing N N 127 ASN ND2 HD21 sing N N 128 ASN ND2 HD22 sing N N 129 ASN OXT HXT sing N N 130 ASP N CA sing N N 131 ASP N H sing N N 132 ASP N H2 sing N N 133 ASP CA C sing N N 134 ASP CA CB sing N N 135 ASP CA HA sing N N 136 ASP C O doub N N 137 ASP C OXT sing N N 138 ASP CB CG sing N N 139 ASP CB HB2 sing N N 140 ASP CB HB3 sing N N 141 ASP CG OD1 doub N N 142 ASP CG OD2 sing N N 143 ASP OD2 HD2 sing N N 144 ASP OXT HXT sing N N 145 CYS N CA sing N N 146 CYS N H sing N N 147 CYS N H2 sing N N 148 CYS CA C sing N N 149 CYS CA CB sing N N 150 CYS CA HA sing N N 151 CYS C O doub N N 152 CYS C OXT sing N N 153 CYS CB SG sing N N 154 CYS CB HB2 sing N N 155 CYS CB HB3 sing N N 156 CYS SG HG sing N N 157 CYS OXT HXT sing N N 158 DA OP3 P sing N N 159 DA OP3 HOP3 sing N N 160 DA P OP1 doub N N 161 DA P OP2 sing N N 162 DA P "O5'" sing N N 163 DA OP2 HOP2 sing N N 164 DA "O5'" "C5'" sing N N 165 DA "C5'" "C4'" sing N N 166 DA "C5'" "H5'" sing N N 167 DA "C5'" "H5''" sing N N 168 DA "C4'" "O4'" sing N N 169 DA "C4'" "C3'" sing N N 170 DA "C4'" "H4'" sing N N 171 DA "O4'" "C1'" sing N N 172 DA "C3'" "O3'" sing N N 173 DA "C3'" "C2'" sing N N 174 DA "C3'" "H3'" sing N N 175 DA "O3'" "HO3'" sing N N 176 DA "C2'" "C1'" sing N N 177 DA "C2'" "H2'" sing N N 178 DA "C2'" "H2''" sing N N 179 DA "C1'" N9 sing N N 180 DA "C1'" "H1'" sing N N 181 DA N9 C8 sing Y N 182 DA N9 C4 sing Y N 183 DA C8 N7 doub Y N 184 DA C8 H8 sing N N 185 DA N7 C5 sing Y N 186 DA C5 C6 sing Y N 187 DA C5 C4 doub Y N 188 DA C6 N6 sing N N 189 DA C6 N1 doub Y N 190 DA N6 H61 sing N N 191 DA N6 H62 sing N N 192 DA N1 C2 sing Y N 193 DA C2 N3 doub Y N 194 DA C2 H2 sing N N 195 DA N3 C4 sing Y N 196 DC OP3 P sing N N 197 DC OP3 HOP3 sing N N 198 DC P OP1 doub N N 199 DC P OP2 sing N N 200 DC P "O5'" sing N N 201 DC OP2 HOP2 sing N N 202 DC "O5'" "C5'" sing N N 203 DC "C5'" "C4'" sing N N 204 DC "C5'" "H5'" sing N N 205 DC "C5'" "H5''" sing N N 206 DC "C4'" "O4'" sing N N 207 DC "C4'" "C3'" sing N N 208 DC "C4'" "H4'" sing N N 209 DC "O4'" "C1'" sing N N 210 DC "C3'" "O3'" sing N N 211 DC "C3'" "C2'" sing N N 212 DC "C3'" "H3'" sing N N 213 DC "O3'" "HO3'" sing N N 214 DC "C2'" "C1'" sing N N 215 DC "C2'" "H2'" sing N N 216 DC "C2'" "H2''" sing N N 217 DC "C1'" N1 sing N N 218 DC "C1'" "H1'" sing N N 219 DC N1 C2 sing N N 220 DC N1 C6 sing N N 221 DC C2 O2 doub N N 222 DC C2 N3 sing N N 223 DC N3 C4 doub N N 224 DC C4 N4 sing N N 225 DC C4 C5 sing N N 226 DC N4 H41 sing N N 227 DC N4 H42 sing N N 228 DC C5 C6 doub N N 229 DC C5 H5 sing N N 230 DC C6 H6 sing N N 231 DG OP3 P sing N N 232 DG OP3 HOP3 sing N N 233 DG P OP1 doub N N 234 DG P OP2 sing N N 235 DG P "O5'" sing N N 236 DG OP2 HOP2 sing N N 237 DG "O5'" "C5'" sing N N 238 DG "C5'" "C4'" sing N N 239 DG "C5'" "H5'" sing N N 240 DG "C5'" "H5''" sing N N 241 DG "C4'" "O4'" sing N N 242 DG "C4'" "C3'" sing N N 243 DG "C4'" "H4'" sing N N 244 DG "O4'" "C1'" sing N N 245 DG "C3'" "O3'" sing N N 246 DG "C3'" "C2'" sing N N 247 DG "C3'" "H3'" sing N N 248 DG "O3'" "HO3'" sing N N 249 DG "C2'" "C1'" sing N N 250 DG "C2'" "H2'" sing N N 251 DG "C2'" "H2''" sing N N 252 DG "C1'" N9 sing N N 253 DG "C1'" "H1'" sing N N 254 DG N9 C8 sing Y N 255 DG N9 C4 sing Y N 256 DG C8 N7 doub Y N 257 DG C8 H8 sing N N 258 DG N7 C5 sing Y N 259 DG C5 C6 sing N N 260 DG C5 C4 doub Y N 261 DG C6 O6 doub N N 262 DG C6 N1 sing N N 263 DG N1 C2 sing N N 264 DG N1 H1 sing N N 265 DG C2 N2 sing N N 266 DG C2 N3 doub N N 267 DG N2 H21 sing N N 268 DG N2 H22 sing N N 269 DG N3 C4 sing N N 270 DT OP3 P sing N N 271 DT OP3 HOP3 sing N N 272 DT P OP1 doub N N 273 DT P OP2 sing N N 274 DT P "O5'" sing N N 275 DT OP2 HOP2 sing N N 276 DT "O5'" "C5'" sing N N 277 DT "C5'" "C4'" sing N N 278 DT "C5'" "H5'" sing N N 279 DT "C5'" "H5''" sing N N 280 DT "C4'" "O4'" sing N N 281 DT "C4'" "C3'" sing N N 282 DT "C4'" "H4'" sing N N 283 DT "O4'" "C1'" sing N N 284 DT "C3'" "O3'" sing N N 285 DT "C3'" "C2'" sing N N 286 DT "C3'" "H3'" sing N N 287 DT "O3'" "HO3'" sing N N 288 DT "C2'" "C1'" sing N N 289 DT "C2'" "H2'" sing N N 290 DT "C2'" "H2''" sing N N 291 DT "C1'" N1 sing N N 292 DT "C1'" "H1'" sing N N 293 DT N1 C2 sing N N 294 DT N1 C6 sing N N 295 DT C2 O2 doub N N 296 DT C2 N3 sing N N 297 DT N3 C4 sing N N 298 DT N3 H3 sing N N 299 DT C4 O4 doub N N 300 DT C4 C5 sing N N 301 DT C5 C7 sing N N 302 DT C5 C6 doub N N 303 DT C7 H71 sing N N 304 DT C7 H72 sing N N 305 DT C7 H73 sing N N 306 DT C6 H6 sing N N 307 FAD PA O1A doub N N 308 FAD PA O2A sing N N 309 FAD PA O5B sing N N 310 FAD PA O3P sing N N 311 FAD O2A HOA2 sing N N 312 FAD O5B C5B sing N N 313 FAD C5B C4B sing N N 314 FAD C5B H51A sing N N 315 FAD C5B H52A sing N N 316 FAD C4B O4B sing N N 317 FAD C4B C3B sing N N 318 FAD C4B H4B sing N N 319 FAD O4B C1B sing N N 320 FAD C3B O3B sing N N 321 FAD C3B C2B sing N N 322 FAD C3B H3B sing N N 323 FAD O3B HO3A sing N N 324 FAD C2B O2B sing N N 325 FAD C2B C1B sing N N 326 FAD C2B H2B sing N N 327 FAD O2B HO2A sing N N 328 FAD C1B N9A sing N N 329 FAD C1B H1B sing N N 330 FAD N9A C8A sing Y N 331 FAD N9A C4A sing Y N 332 FAD C8A N7A doub Y N 333 FAD C8A H8A sing N N 334 FAD N7A C5A sing Y N 335 FAD C5A C6A sing Y N 336 FAD C5A C4A doub Y N 337 FAD C6A N6A sing N N 338 FAD C6A N1A doub Y N 339 FAD N6A H61A sing N N 340 FAD N6A H62A sing N N 341 FAD N1A C2A sing Y N 342 FAD C2A N3A doub Y N 343 FAD C2A H2A sing N N 344 FAD N3A C4A sing Y N 345 FAD N1 C2 sing N N 346 FAD N1 C10 doub N N 347 FAD C2 O2 doub N N 348 FAD C2 N3 sing N N 349 FAD N3 C4 sing N N 350 FAD N3 HN3 sing N N 351 FAD C4 O4 doub N N 352 FAD C4 C4X sing N N 353 FAD C4X N5 doub N N 354 FAD C4X C10 sing N N 355 FAD N5 C5X sing N N 356 FAD C5X C6 doub Y N 357 FAD C5X C9A sing Y N 358 FAD C6 C7 sing Y N 359 FAD C6 H6 sing N N 360 FAD C7 C7M sing N N 361 FAD C7 C8 doub Y N 362 FAD C7M HM71 sing N N 363 FAD C7M HM72 sing N N 364 FAD C7M HM73 sing N N 365 FAD C8 C8M sing N N 366 FAD C8 C9 sing Y N 367 FAD C8M HM81 sing N N 368 FAD C8M HM82 sing N N 369 FAD C8M HM83 sing N N 370 FAD C9 C9A doub Y N 371 FAD C9 H9 sing N N 372 FAD C9A N10 sing N N 373 FAD N10 C10 sing N N 374 FAD N10 "C1'" sing N N 375 FAD "C1'" "C2'" sing N N 376 FAD "C1'" "H1'1" sing N N 377 FAD "C1'" "H1'2" sing N N 378 FAD "C2'" "O2'" sing N N 379 FAD "C2'" "C3'" sing N N 380 FAD "C2'" "H2'" sing N N 381 FAD "O2'" "HO2'" sing N N 382 FAD "C3'" "O3'" sing N N 383 FAD "C3'" "C4'" sing N N 384 FAD "C3'" "H3'" sing N N 385 FAD "O3'" "HO3'" sing N N 386 FAD "C4'" "O4'" sing N N 387 FAD "C4'" "C5'" sing N N 388 FAD "C4'" "H4'" sing N N 389 FAD "O4'" "HO4'" sing N N 390 FAD "C5'" "O5'" sing N N 391 FAD "C5'" "H5'1" sing N N 392 FAD "C5'" "H5'2" sing N N 393 FAD "O5'" P sing N N 394 FAD P O1P doub N N 395 FAD P O2P sing N N 396 FAD P O3P sing N N 397 FAD O2P HOP2 sing N N 398 FO1 N1 C1 sing N N 399 FO1 N1 C13 doub N N 400 FO1 C1 O1 doub N N 401 FO1 C1 N2 sing N N 402 FO1 N2 C2 sing N N 403 FO1 N2 HN3 sing N N 404 FO1 C2 O2 doub N N 405 FO1 C2 C3 sing N N 406 FO1 C3 C4 doub N N 407 FO1 C3 C13 sing N N 408 FO1 C4 C5 sing N N 409 FO1 C4 H21 sing N N 410 FO1 C5 C6 doub Y N 411 FO1 C5 C12 sing Y N 412 FO1 C6 C7 sing Y N 413 FO1 C6 HC6 sing N N 414 FO1 C7 C9 doub Y N 415 FO1 C7 HC7 sing N N 416 FO1 C9 O10 sing N N 417 FO1 C9 C11 sing Y N 418 FO1 O10 HC82 sing N N 419 FO1 C11 C12 doub Y N 420 FO1 C11 HC9 sing N N 421 FO1 C12 N3 sing N N 422 FO1 N3 C13 sing N N 423 FO1 N3 C14 sing N N 424 FO1 C14 C15 sing N N 425 FO1 C14 HC11 sing N N 426 FO1 C14 HC12 sing N N 427 FO1 C15 O3 sing N N 428 FO1 C15 C16 sing N N 429 FO1 C15 "HC2'" sing N N 430 FO1 O3 "HO2'" sing N N 431 FO1 C16 O4 sing N N 432 FO1 C16 C17 sing N N 433 FO1 C16 "HC3'" sing N N 434 FO1 O4 "HO3'" sing N N 435 FO1 C17 O5 sing N N 436 FO1 C17 C18 sing N N 437 FO1 C17 "HC4'" sing N N 438 FO1 O5 "HO4'" sing N N 439 FO1 C18 O6 sing N N 440 FO1 C18 HC51 sing N N 441 FO1 C18 HC52 sing N N 442 FO1 O6 "HO5'" sing N N 443 GLN N CA sing N N 444 GLN N H sing N N 445 GLN N H2 sing N N 446 GLN CA C sing N N 447 GLN CA CB sing N N 448 GLN CA HA sing N N 449 GLN C O doub N N 450 GLN C OXT sing N N 451 GLN CB CG sing N N 452 GLN CB HB2 sing N N 453 GLN CB HB3 sing N N 454 GLN CG CD sing N N 455 GLN CG HG2 sing N N 456 GLN CG HG3 sing N N 457 GLN CD OE1 doub N N 458 GLN CD NE2 sing N N 459 GLN NE2 HE21 sing N N 460 GLN NE2 HE22 sing N N 461 GLN OXT HXT sing N N 462 GLU N CA sing N N 463 GLU N H sing N N 464 GLU N H2 sing N N 465 GLU CA C sing N N 466 GLU CA CB sing N N 467 GLU CA HA sing N N 468 GLU C O doub N N 469 GLU C OXT sing N N 470 GLU CB CG sing N N 471 GLU CB HB2 sing N N 472 GLU CB HB3 sing N N 473 GLU CG CD sing N N 474 GLU CG HG2 sing N N 475 GLU CG HG3 sing N N 476 GLU CD OE1 doub N N 477 GLU CD OE2 sing N N 478 GLU OE2 HE2 sing N N 479 GLU OXT HXT sing N N 480 GLY N CA sing N N 481 GLY N H sing N N 482 GLY N H2 sing N N 483 GLY CA C sing N N 484 GLY CA HA2 sing N N 485 GLY CA HA3 sing N N 486 GLY C O doub N N 487 GLY C OXT sing N N 488 GLY OXT HXT sing N N 489 HIS N CA sing N N 490 HIS N H sing N N 491 HIS N H2 sing N N 492 HIS CA C sing N N 493 HIS CA CB sing N N 494 HIS CA HA sing N N 495 HIS C O doub N N 496 HIS C OXT sing N N 497 HIS CB CG sing N N 498 HIS CB HB2 sing N N 499 HIS CB HB3 sing N N 500 HIS CG ND1 sing Y N 501 HIS CG CD2 doub Y N 502 HIS ND1 CE1 doub Y N 503 HIS ND1 HD1 sing N N 504 HIS CD2 NE2 sing Y N 505 HIS CD2 HD2 sing N N 506 HIS CE1 NE2 sing Y N 507 HIS CE1 HE1 sing N N 508 HIS NE2 HE2 sing N N 509 HIS OXT HXT sing N N 510 HOH O H1 sing N N 511 HOH O H2 sing N N 512 ILE N CA sing N N 513 ILE N H sing N N 514 ILE N H2 sing N N 515 ILE CA C sing N N 516 ILE CA CB sing N N 517 ILE CA HA sing N N 518 ILE C O doub N N 519 ILE C OXT sing N N 520 ILE CB CG1 sing N N 521 ILE CB CG2 sing N N 522 ILE CB HB sing N N 523 ILE CG1 CD1 sing N N 524 ILE CG1 HG12 sing N N 525 ILE CG1 HG13 sing N N 526 ILE CG2 HG21 sing N N 527 ILE CG2 HG22 sing N N 528 ILE CG2 HG23 sing N N 529 ILE CD1 HD11 sing N N 530 ILE CD1 HD12 sing N N 531 ILE CD1 HD13 sing N N 532 ILE OXT HXT sing N N 533 LEU N CA sing N N 534 LEU N H sing N N 535 LEU N H2 sing N N 536 LEU CA C sing N N 537 LEU CA CB sing N N 538 LEU CA HA sing N N 539 LEU C O doub N N 540 LEU C OXT sing N N 541 LEU CB CG sing N N 542 LEU CB HB2 sing N N 543 LEU CB HB3 sing N N 544 LEU CG CD1 sing N N 545 LEU CG CD2 sing N N 546 LEU CG HG sing N N 547 LEU CD1 HD11 sing N N 548 LEU CD1 HD12 sing N N 549 LEU CD1 HD13 sing N N 550 LEU CD2 HD21 sing N N 551 LEU CD2 HD22 sing N N 552 LEU CD2 HD23 sing N N 553 LEU OXT HXT sing N N 554 LYS N CA sing N N 555 LYS N H sing N N 556 LYS N H2 sing N N 557 LYS CA C sing N N 558 LYS CA CB sing N N 559 LYS CA HA sing N N 560 LYS C O doub N N 561 LYS C OXT sing N N 562 LYS CB CG sing N N 563 LYS CB HB2 sing N N 564 LYS CB HB3 sing N N 565 LYS CG CD sing N N 566 LYS CG HG2 sing N N 567 LYS CG HG3 sing N N 568 LYS CD CE sing N N 569 LYS CD HD2 sing N N 570 LYS CD HD3 sing N N 571 LYS CE NZ sing N N 572 LYS CE HE2 sing N N 573 LYS CE HE3 sing N N 574 LYS NZ HZ1 sing N N 575 LYS NZ HZ2 sing N N 576 LYS NZ HZ3 sing N N 577 LYS OXT HXT sing N N 578 MET N CA sing N N 579 MET N H sing N N 580 MET N H2 sing N N 581 MET CA C sing N N 582 MET CA CB sing N N 583 MET CA HA sing N N 584 MET C O doub N N 585 MET C OXT sing N N 586 MET CB CG sing N N 587 MET CB HB2 sing N N 588 MET CB HB3 sing N N 589 MET CG SD sing N N 590 MET CG HG2 sing N N 591 MET CG HG3 sing N N 592 MET SD CE sing N N 593 MET CE HE1 sing N N 594 MET CE HE2 sing N N 595 MET CE HE3 sing N N 596 MET OXT HXT sing N N 597 PHE N CA sing N N 598 PHE N H sing N N 599 PHE N H2 sing N N 600 PHE CA C sing N N 601 PHE CA CB sing N N 602 PHE CA HA sing N N 603 PHE C O doub N N 604 PHE C OXT sing N N 605 PHE CB CG sing N N 606 PHE CB HB2 sing N N 607 PHE CB HB3 sing N N 608 PHE CG CD1 doub Y N 609 PHE CG CD2 sing Y N 610 PHE CD1 CE1 sing Y N 611 PHE CD1 HD1 sing N N 612 PHE CD2 CE2 doub Y N 613 PHE CD2 HD2 sing N N 614 PHE CE1 CZ doub Y N 615 PHE CE1 HE1 sing N N 616 PHE CE2 CZ sing Y N 617 PHE CE2 HE2 sing N N 618 PHE CZ HZ sing N N 619 PHE OXT HXT sing N N 620 PRO N CA sing N N 621 PRO N CD sing N N 622 PRO N H sing N N 623 PRO CA C sing N N 624 PRO CA CB sing N N 625 PRO CA HA sing N N 626 PRO C O doub N N 627 PRO C OXT sing N N 628 PRO CB CG sing N N 629 PRO CB HB2 sing N N 630 PRO CB HB3 sing N N 631 PRO CG CD sing N N 632 PRO CG HG2 sing N N 633 PRO CG HG3 sing N N 634 PRO CD HD2 sing N N 635 PRO CD HD3 sing N N 636 PRO OXT HXT sing N N 637 SER N CA sing N N 638 SER N H sing N N 639 SER N H2 sing N N 640 SER CA C sing N N 641 SER CA CB sing N N 642 SER CA HA sing N N 643 SER C O doub N N 644 SER C OXT sing N N 645 SER CB OG sing N N 646 SER CB HB2 sing N N 647 SER CB HB3 sing N N 648 SER OG HG sing N N 649 SER OXT HXT sing N N 650 THR N CA sing N N 651 THR N H sing N N 652 THR N H2 sing N N 653 THR CA C sing N N 654 THR CA CB sing N N 655 THR CA HA sing N N 656 THR C O doub N N 657 THR C OXT sing N N 658 THR CB OG1 sing N N 659 THR CB CG2 sing N N 660 THR CB HB sing N N 661 THR OG1 HG1 sing N N 662 THR CG2 HG21 sing N N 663 THR CG2 HG22 sing N N 664 THR CG2 HG23 sing N N 665 THR OXT HXT sing N N 666 TRP N CA sing N N 667 TRP N H sing N N 668 TRP N H2 sing N N 669 TRP CA C sing N N 670 TRP CA CB sing N N 671 TRP CA HA sing N N 672 TRP C O doub N N 673 TRP C OXT sing N N 674 TRP CB CG sing N N 675 TRP CB HB2 sing N N 676 TRP CB HB3 sing N N 677 TRP CG CD1 doub Y N 678 TRP CG CD2 sing Y N 679 TRP CD1 NE1 sing Y N 680 TRP CD1 HD1 sing N N 681 TRP CD2 CE2 doub Y N 682 TRP CD2 CE3 sing Y N 683 TRP NE1 CE2 sing Y N 684 TRP NE1 HE1 sing N N 685 TRP CE2 CZ2 sing Y N 686 TRP CE3 CZ3 doub Y N 687 TRP CE3 HE3 sing N N 688 TRP CZ2 CH2 doub Y N 689 TRP CZ2 HZ2 sing N N 690 TRP CZ3 CH2 sing Y N 691 TRP CZ3 HZ3 sing N N 692 TRP CH2 HH2 sing N N 693 TRP OXT HXT sing N N 694 TYR N CA sing N N 695 TYR N H sing N N 696 TYR N H2 sing N N 697 TYR CA C sing N N 698 TYR CA CB sing N N 699 TYR CA HA sing N N 700 TYR C O doub N N 701 TYR C OXT sing N N 702 TYR CB CG sing N N 703 TYR CB HB2 sing N N 704 TYR CB HB3 sing N N 705 TYR CG CD1 doub Y N 706 TYR CG CD2 sing Y N 707 TYR CD1 CE1 sing Y N 708 TYR CD1 HD1 sing N N 709 TYR CD2 CE2 doub Y N 710 TYR CD2 HD2 sing N N 711 TYR CE1 CZ doub Y N 712 TYR CE1 HE1 sing N N 713 TYR CE2 CZ sing Y N 714 TYR CE2 HE2 sing N N 715 TYR CZ OH sing N N 716 TYR OH HH sing N N 717 TYR OXT HXT sing N N 718 VAL N CA sing N N 719 VAL N H sing N N 720 VAL N H2 sing N N 721 VAL CA C sing N N 722 VAL CA CB sing N N 723 VAL CA HA sing N N 724 VAL C O doub N N 725 VAL C OXT sing N N 726 VAL CB CG1 sing N N 727 VAL CB CG2 sing N N 728 VAL CB HB sing N N 729 VAL CG1 HG11 sing N N 730 VAL CG1 HG12 sing N N 731 VAL CG1 HG13 sing N N 732 VAL CG2 HG21 sing N N 733 VAL CG2 HG22 sing N N 734 VAL CG2 HG23 sing N N 735 VAL OXT HXT sing N N 736 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3CVW 'double helix' 3CVW 'b-form double helix' 3CVW 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 2 1_555 B DG 15 1_555 -0.686 0.156 -0.291 -11.082 -10.493 -11.193 1 C_DC2:DG15_D C 2 ? D 15 ? ? ? 1 A DA 3 1_555 B DT 14 1_555 -0.558 -0.146 0.477 1.825 -11.074 7.290 2 C_DA3:DT14_D C 3 ? D 14 ? 20 1 1 A DG 4 1_555 B DC 13 1_555 -0.042 0.475 0.311 -0.368 -12.302 10.163 3 C_DG4:DC13_D C 4 ? D 13 ? ? 1 1 A DC 5 1_555 B DG 12 1_555 0.325 -0.307 0.369 -1.313 -12.659 -4.984 4 C_DC5:DG12_D C 5 ? D 12 ? 19 1 1 A DG 6 1_555 B DC 11 1_555 0.304 0.014 0.482 8.692 -18.549 2.227 5 C_DG6:DC11_D C 6 ? D 11 ? 19 1 1 A DG 7 1_555 B DC 10 1_555 0.407 -0.151 1.388 23.119 -13.260 -0.702 6 C_DG7:DC10_D C 7 ? D 10 ? 19 1 1 A DG 10 1_555 B DC 7 1_555 -1.681 -0.091 0.258 4.780 7.044 12.557 7 C_DG10:DC7_D C 10 ? D 7 ? ? 1 1 A DC 11 1_555 B DG 6 1_555 -0.738 -0.086 0.339 2.542 -8.212 -3.596 8 C_DC11:DG6_D C 11 ? D 6 ? 19 1 1 A DA 12 1_555 B DT 5 1_555 1.088 0.262 -0.078 0.834 -6.187 -4.538 9 C_DA12:DT5_D C 12 ? D 5 ? 20 1 1 A DG 13 1_555 B DC 4 1_555 -0.836 -0.523 -0.418 4.425 -21.010 3.984 10 C_DG13:DC4_D C 13 ? D 4 ? 19 1 1 A DG 14 1_555 B DC 3 1_555 -0.440 0.182 0.492 -11.052 -8.118 2.767 11 C_DG14:DC3_D C 14 ? D 3 ? 19 1 1 A DT 15 1_555 B DA 2 1_555 0.377 0.213 0.307 -1.329 -3.398 8.863 12 C_DT15:DA2_D C 15 ? D 2 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 15 1_555 A DA 3 1_555 B DT 14 1_555 0.634 0.348 3.035 -9.111 6.970 30.791 -0.479 -2.553 2.754 12.591 16.459 32.810 1 CC_DC2DA3:DT14DG15_DD C 2 ? D 15 ? C 3 ? D 14 ? 1 A DA 3 1_555 B DT 14 1_555 A DG 4 1_555 B DC 13 1_555 -0.488 0.449 3.359 -1.912 0.855 41.198 0.543 0.480 3.385 1.214 2.716 41.249 2 CC_DA3DG4:DC13DT14_DD C 3 ? D 14 ? C 4 ? D 13 ? 1 A DG 4 1_555 B DC 13 1_555 A DC 5 1_555 B DG 12 1_555 -0.782 -0.396 3.303 -1.833 1.459 35.414 -0.866 1.011 3.320 2.395 3.010 35.489 3 CC_DG4DC5:DG12DC13_DD C 4 ? D 13 ? C 5 ? D 12 ? 1 A DC 5 1_555 B DG 12 1_555 A DG 6 1_555 B DC 11 1_555 0.482 0.300 3.148 -0.368 5.249 36.828 -0.206 -0.803 3.155 8.257 0.579 37.189 4 CC_DC5DG6:DC11DG12_DD C 5 ? D 12 ? C 6 ? D 11 ? 1 A DG 6 1_555 B DC 11 1_555 A DG 7 1_555 B DC 10 1_555 0.438 -0.636 2.886 -7.045 -3.941 33.861 -0.535 -1.679 2.795 -6.650 11.886 34.782 5 CC_DG6DG7:DC10DC11_DD C 6 ? D 11 ? C 7 ? D 10 ? 1 A DG 10 1_555 B DC 7 1_555 A DC 11 1_555 B DG 6 1_555 -0.932 -0.868 3.376 -2.383 6.433 36.113 -2.272 1.147 3.232 10.263 3.802 36.737 6 CC_DG10DC11:DG6DC7_DD C 10 ? D 7 ? C 11 ? D 6 ? 1 A DC 11 1_555 B DG 6 1_555 A DA 12 1_555 B DT 5 1_555 0.196 -0.063 3.316 4.666 1.717 44.612 -0.240 0.173 3.315 2.253 -6.124 44.874 7 CC_DC11DA12:DT5DG6_DD C 11 ? D 6 ? C 12 ? D 5 ? 1 A DA 12 1_555 B DT 5 1_555 A DG 13 1_555 B DC 4 1_555 0.399 -0.739 3.207 -1.710 14.519 16.483 -6.940 -1.634 1.894 41.538 4.892 21.999 8 CC_DA12DG13:DC4DT5_DD C 12 ? D 5 ? C 13 ? D 4 ? 1 A DG 13 1_555 B DC 4 1_555 A DG 14 1_555 B DC 3 1_555 1.299 -0.920 3.464 -4.984 -0.883 41.285 -1.198 -2.378 3.310 -1.247 7.037 41.581 9 CC_DG13DG14:DC3DC4_DD C 13 ? D 4 ? C 14 ? D 3 ? 1 A DG 14 1_555 B DC 3 1_555 A DT 15 1_555 B DA 2 1_555 -0.228 -0.692 3.170 4.280 0.553 30.489 -1.407 1.235 3.097 1.044 -8.087 30.786 10 CC_DG14DT15:DA2DC3_DD C 14 ? D 3 ? C 15 ? D 2 ? # _atom_sites.entry_id 3CVW _atom_sites.fract_transf_matrix[1][1] 0.011565 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011172 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011193 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_