HEADER CHAPERONE 21-APR-08 3CW0 TITLE E.COLI DMSD COMPND MOL_ID: 1; COMPND 2 MOLECULE: TWIN-ARGININE LEADER-BINDING PROTEIN DMSD; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 GENE: DMSD, YNFI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET33B KEYWDS DMSD, ALPHA-HELICES, CHAPERONE, MEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR S.RAMASAMY,W.CLEMONS REVDAT 6 21-FEB-24 3CW0 1 SEQADV REVDAT 5 25-OCT-17 3CW0 1 REMARK REVDAT 4 14-DEC-11 3CW0 1 JRNL REVDAT 3 13-JUL-11 3CW0 1 VERSN REVDAT 2 05-MAY-09 3CW0 1 SOURCE REVDAT 1 28-APR-09 3CW0 0 JRNL AUTH S.K.RAMASAMY,W.M.CLEMONS JRNL TITL STRUCTURE OF THE TWIN-ARGININE SIGNAL-BINDING PROTEIN DMSD JRNL TITL 2 FROM ESCHERICHIA COLI. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 65 746 2009 JRNL REFN ESSN 1744-3091 JRNL PMID 19652330 JRNL DOI 10.1107/S1744309109023811 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 38472 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2029 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2810 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 134 REMARK 3 BIN FREE R VALUE : 0.3610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6588 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 509 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.398 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.251 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.174 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.157 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6812 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4572 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9320 ; 1.414 ; 1.932 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11060 ; 0.945 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 808 ; 5.429 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 332 ;31.239 ;23.735 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1028 ;15.955 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;20.539 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 984 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7604 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1480 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4080 ; 0.576 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1600 ; 0.124 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6552 ; 1.098 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2732 ; 1.889 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2768 ; 3.019 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): 38.6540 -19.2100 13.0690 REMARK 3 T TENSOR REMARK 3 T11: .0270 T22: .0127 REMARK 3 T33: .0646 T12: -.0141 REMARK 3 T13: .0328 T23: -.0167 REMARK 3 L TENSOR REMARK 3 L11: 2.1717 L22: .9533 REMARK 3 L33: 2.1690 L12: -.4308 REMARK 3 L13: -.4237 L23: -.2832 REMARK 3 S TENSOR REMARK 3 S11: -.0093 S12: .0871 S13: -.0679 REMARK 3 S21: -.0651 S22: .0217 S23: .0578 REMARK 3 S31: .0543 S32: -.1105 S33: -.0124 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 204 REMARK 3 ORIGIN FOR THE GROUP (A): 29.7240 12.2010 18.2090 REMARK 3 T TENSOR REMARK 3 T11: .0266 T22: .0064 REMARK 3 T33: .0222 T12: -.0042 REMARK 3 T13: .0125 T23: .0021 REMARK 3 L TENSOR REMARK 3 L11: 1.5110 L22: 2.2558 REMARK 3 L33: 2.2592 L12: .0818 REMARK 3 L13: .2875 L23: -.1504 REMARK 3 S TENSOR REMARK 3 S11: -.0410 S12: .0443 S13: .0745 REMARK 3 S21: -.0202 S22: .1082 S23: .0170 REMARK 3 S31: -.2293 S32: .0219 S33: -.0671 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 204 REMARK 3 ORIGIN FOR THE GROUP (A): 60.7030 22.4390 11.9690 REMARK 3 T TENSOR REMARK 3 T11: .0284 T22: .0653 REMARK 3 T33: .0876 T12: .0222 REMARK 3 T13: -.0268 T23: -.0599 REMARK 3 L TENSOR REMARK 3 L11: 1.7688 L22: 2.1565 REMARK 3 L33: 3.5700 L12: -.2747 REMARK 3 L13: -.2575 L23: .6904 REMARK 3 S TENSOR REMARK 3 S11: .1660 S12: .0787 S13: -.0697 REMARK 3 S21: .0757 S22: .1489 S23: -.3693 REMARK 3 S31: .1075 S32: .4295 S33: -.3148 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 204 REMARK 3 ORIGIN FOR THE GROUP (A): 69.7350 -9.1640 7.4460 REMARK 3 T TENSOR REMARK 3 T11: .0089 T22: .0159 REMARK 3 T33: .1164 T12: .0104 REMARK 3 T13: .0204 T23: .0171 REMARK 3 L TENSOR REMARK 3 L11: 2.3644 L22: 1.5320 REMARK 3 L33: 1.6920 L12: .2777 REMARK 3 L13: .0629 L23: .1572 REMARK 3 S TENSOR REMARK 3 S11: .0218 S12: -.0478 S13: .0648 REMARK 3 S21: -.0242 S22: -.0310 S23: -.1458 REMARK 3 S31: .0759 S32: .0832 S33: .0093 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CW0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047279. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55317 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 97.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.38900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M AMMONIUM SULPHATE, 0.1M HEPES, 0.5% REMARK 280 PEG8K, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.02100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.72450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.72450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.51050 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.72450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.72450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 157.53150 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.72450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.72450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.51050 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.72450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.72450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 157.53150 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 105.02100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 VAL A -1 REMARK 465 ASP A 0 REMARK 465 MET A 1 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 VAL B -1 REMARK 465 ASP B 0 REMARK 465 MET B 1 REMARK 465 GLY C -3 REMARK 465 SER C -2 REMARK 465 VAL C -1 REMARK 465 ASP C 0 REMARK 465 MET C 1 REMARK 465 GLY D -3 REMARK 465 SER D -2 REMARK 465 VAL D -1 REMARK 465 ASP D 0 REMARK 465 MET D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 107 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 107 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 107 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 77 -67.81 -121.78 REMARK 500 PRO A 86 26.98 -76.64 REMARK 500 ASP A 126 31.73 -96.51 REMARK 500 ARG A 143 71.21 -104.29 REMARK 500 LEU A 155 -61.00 -124.36 REMARK 500 VAL B 77 -61.67 -124.59 REMARK 500 PRO B 86 36.21 -86.09 REMARK 500 GLN B 116 68.03 -110.78 REMARK 500 ASP C 8 44.38 39.62 REMARK 500 ALA C 81 133.77 -37.53 REMARK 500 GLN C 116 52.27 -101.74 REMARK 500 VAL D 77 -59.87 -120.72 REMARK 500 ASP D 126 30.67 -99.26 REMARK 500 LEU D 155 -61.79 -124.14 REMARK 500 REMARK 500 REMARK: NULL DBREF 3CW0 A 1 204 UNP P69853 DMSD_ECOLI 1 204 DBREF 3CW0 B 1 204 UNP P69853 DMSD_ECOLI 1 204 DBREF 3CW0 C 1 204 UNP P69853 DMSD_ECOLI 1 204 DBREF 3CW0 D 1 204 UNP P69853 DMSD_ECOLI 1 204 SEQADV 3CW0 GLY A -3 UNP P69853 EXPRESSION TAG SEQADV 3CW0 SER A -2 UNP P69853 EXPRESSION TAG SEQADV 3CW0 VAL A -1 UNP P69853 EXPRESSION TAG SEQADV 3CW0 ASP A 0 UNP P69853 EXPRESSION TAG SEQADV 3CW0 GLY B -3 UNP P69853 EXPRESSION TAG SEQADV 3CW0 SER B -2 UNP P69853 EXPRESSION TAG SEQADV 3CW0 VAL B -1 UNP P69853 EXPRESSION TAG SEQADV 3CW0 ASP B 0 UNP P69853 EXPRESSION TAG SEQADV 3CW0 GLY C -3 UNP P69853 EXPRESSION TAG SEQADV 3CW0 SER C -2 UNP P69853 EXPRESSION TAG SEQADV 3CW0 VAL C -1 UNP P69853 EXPRESSION TAG SEQADV 3CW0 ASP C 0 UNP P69853 EXPRESSION TAG SEQADV 3CW0 GLY D -3 UNP P69853 EXPRESSION TAG SEQADV 3CW0 SER D -2 UNP P69853 EXPRESSION TAG SEQADV 3CW0 VAL D -1 UNP P69853 EXPRESSION TAG SEQADV 3CW0 ASP D 0 UNP P69853 EXPRESSION TAG SEQRES 1 A 208 GLY SER VAL ASP MET THR HIS PHE SER GLN GLN ASP ASN SEQRES 2 A 208 PHE SER VAL ALA ALA ARG VAL LEU GLY ALA LEU PHE TYR SEQRES 3 A 208 TYR ALA PRO GLU SER ALA GLU ALA ALA PRO LEU VAL ALA SEQRES 4 A 208 VAL LEU THR SER ASP GLY TRP GLU THR GLN TRP PRO LEU SEQRES 5 A 208 PRO GLU ALA SER LEU ALA PRO LEU VAL THR ALA PHE GLN SEQRES 6 A 208 THR GLN CYS GLU GLU THR HIS ALA GLN ALA TRP GLN ARG SEQRES 7 A 208 LEU PHE VAL GLY PRO TRP ALA LEU PRO SER PRO PRO TRP SEQRES 8 A 208 GLY SER VAL TRP LEU ASP ARG GLU SER VAL LEU PHE GLY SEQRES 9 A 208 ASP SER THR LEU ALA LEU ARG GLN TRP MET ARG GLU LYS SEQRES 10 A 208 GLY ILE GLN PHE GLU MET LYS GLN ASN GLU PRO GLU ASP SEQRES 11 A 208 HIS PHE GLY SER LEU LEU LEU MET ALA ALA TRP LEU ALA SEQRES 12 A 208 GLU ASN GLY ARG GLN THR GLU CYS GLU GLU LEU LEU ALA SEQRES 13 A 208 TRP HIS LEU PHE PRO TRP SER THR ARG PHE LEU ASP VAL SEQRES 14 A 208 PHE ILE GLU LYS ALA GLU HIS PRO PHE TYR ARG ALA LEU SEQRES 15 A 208 GLY GLU LEU ALA ARG LEU THR LEU ALA GLN TRP GLN SER SEQRES 16 A 208 GLN LEU LEU ILE PRO VAL ALA VAL LYS PRO LEU PHE ARG SEQRES 1 B 208 GLY SER VAL ASP MET THR HIS PHE SER GLN GLN ASP ASN SEQRES 2 B 208 PHE SER VAL ALA ALA ARG VAL LEU GLY ALA LEU PHE TYR SEQRES 3 B 208 TYR ALA PRO GLU SER ALA GLU ALA ALA PRO LEU VAL ALA SEQRES 4 B 208 VAL LEU THR SER ASP GLY TRP GLU THR GLN TRP PRO LEU SEQRES 5 B 208 PRO GLU ALA SER LEU ALA PRO LEU VAL THR ALA PHE GLN SEQRES 6 B 208 THR GLN CYS GLU GLU THR HIS ALA GLN ALA TRP GLN ARG SEQRES 7 B 208 LEU PHE VAL GLY PRO TRP ALA LEU PRO SER PRO PRO TRP SEQRES 8 B 208 GLY SER VAL TRP LEU ASP ARG GLU SER VAL LEU PHE GLY SEQRES 9 B 208 ASP SER THR LEU ALA LEU ARG GLN TRP MET ARG GLU LYS SEQRES 10 B 208 GLY ILE GLN PHE GLU MET LYS GLN ASN GLU PRO GLU ASP SEQRES 11 B 208 HIS PHE GLY SER LEU LEU LEU MET ALA ALA TRP LEU ALA SEQRES 12 B 208 GLU ASN GLY ARG GLN THR GLU CYS GLU GLU LEU LEU ALA SEQRES 13 B 208 TRP HIS LEU PHE PRO TRP SER THR ARG PHE LEU ASP VAL SEQRES 14 B 208 PHE ILE GLU LYS ALA GLU HIS PRO PHE TYR ARG ALA LEU SEQRES 15 B 208 GLY GLU LEU ALA ARG LEU THR LEU ALA GLN TRP GLN SER SEQRES 16 B 208 GLN LEU LEU ILE PRO VAL ALA VAL LYS PRO LEU PHE ARG SEQRES 1 C 208 GLY SER VAL ASP MET THR HIS PHE SER GLN GLN ASP ASN SEQRES 2 C 208 PHE SER VAL ALA ALA ARG VAL LEU GLY ALA LEU PHE TYR SEQRES 3 C 208 TYR ALA PRO GLU SER ALA GLU ALA ALA PRO LEU VAL ALA SEQRES 4 C 208 VAL LEU THR SER ASP GLY TRP GLU THR GLN TRP PRO LEU SEQRES 5 C 208 PRO GLU ALA SER LEU ALA PRO LEU VAL THR ALA PHE GLN SEQRES 6 C 208 THR GLN CYS GLU GLU THR HIS ALA GLN ALA TRP GLN ARG SEQRES 7 C 208 LEU PHE VAL GLY PRO TRP ALA LEU PRO SER PRO PRO TRP SEQRES 8 C 208 GLY SER VAL TRP LEU ASP ARG GLU SER VAL LEU PHE GLY SEQRES 9 C 208 ASP SER THR LEU ALA LEU ARG GLN TRP MET ARG GLU LYS SEQRES 10 C 208 GLY ILE GLN PHE GLU MET LYS GLN ASN GLU PRO GLU ASP SEQRES 11 C 208 HIS PHE GLY SER LEU LEU LEU MET ALA ALA TRP LEU ALA SEQRES 12 C 208 GLU ASN GLY ARG GLN THR GLU CYS GLU GLU LEU LEU ALA SEQRES 13 C 208 TRP HIS LEU PHE PRO TRP SER THR ARG PHE LEU ASP VAL SEQRES 14 C 208 PHE ILE GLU LYS ALA GLU HIS PRO PHE TYR ARG ALA LEU SEQRES 15 C 208 GLY GLU LEU ALA ARG LEU THR LEU ALA GLN TRP GLN SER SEQRES 16 C 208 GLN LEU LEU ILE PRO VAL ALA VAL LYS PRO LEU PHE ARG SEQRES 1 D 208 GLY SER VAL ASP MET THR HIS PHE SER GLN GLN ASP ASN SEQRES 2 D 208 PHE SER VAL ALA ALA ARG VAL LEU GLY ALA LEU PHE TYR SEQRES 3 D 208 TYR ALA PRO GLU SER ALA GLU ALA ALA PRO LEU VAL ALA SEQRES 4 D 208 VAL LEU THR SER ASP GLY TRP GLU THR GLN TRP PRO LEU SEQRES 5 D 208 PRO GLU ALA SER LEU ALA PRO LEU VAL THR ALA PHE GLN SEQRES 6 D 208 THR GLN CYS GLU GLU THR HIS ALA GLN ALA TRP GLN ARG SEQRES 7 D 208 LEU PHE VAL GLY PRO TRP ALA LEU PRO SER PRO PRO TRP SEQRES 8 D 208 GLY SER VAL TRP LEU ASP ARG GLU SER VAL LEU PHE GLY SEQRES 9 D 208 ASP SER THR LEU ALA LEU ARG GLN TRP MET ARG GLU LYS SEQRES 10 D 208 GLY ILE GLN PHE GLU MET LYS GLN ASN GLU PRO GLU ASP SEQRES 11 D 208 HIS PHE GLY SER LEU LEU LEU MET ALA ALA TRP LEU ALA SEQRES 12 D 208 GLU ASN GLY ARG GLN THR GLU CYS GLU GLU LEU LEU ALA SEQRES 13 D 208 TRP HIS LEU PHE PRO TRP SER THR ARG PHE LEU ASP VAL SEQRES 14 D 208 PHE ILE GLU LYS ALA GLU HIS PRO PHE TYR ARG ALA LEU SEQRES 15 D 208 GLY GLU LEU ALA ARG LEU THR LEU ALA GLN TRP GLN SER SEQRES 16 D 208 GLN LEU LEU ILE PRO VAL ALA VAL LYS PRO LEU PHE ARG FORMUL 5 HOH *509(H2 O) HELIX 1 1 HIS A 3 GLN A 7 5 5 HELIX 2 2 ASN A 9 TYR A 23 1 15 HELIX 3 3 ALA A 30 THR A 38 1 9 HELIX 4 4 GLY A 41 GLN A 45 5 5 HELIX 5 5 PRO A 49 THR A 62 1 14 HELIX 6 6 THR A 67 VAL A 77 1 11 HELIX 7 7 TRP A 87 ASP A 93 1 7 HELIX 8 8 GLY A 100 LYS A 113 1 14 HELIX 9 9 HIS A 127 ASN A 141 1 15 HELIX 10 10 ARG A 143 LEU A 155 1 13 HELIX 11 11 LEU A 155 ALA A 170 1 16 HELIX 12 12 HIS A 172 SER A 191 1 20 HELIX 13 13 HIS B 3 GLN B 7 5 5 HELIX 14 14 ASN B 9 TYR B 23 1 15 HELIX 15 15 ALA B 30 THR B 38 1 9 HELIX 16 16 GLY B 41 GLN B 45 5 5 HELIX 17 17 PRO B 49 GLN B 61 1 13 HELIX 18 18 THR B 67 VAL B 77 1 11 HELIX 19 19 TRP B 87 ASP B 93 1 7 HELIX 20 20 GLY B 100 GLY B 114 1 15 HELIX 21 21 HIS B 127 ASN B 141 1 15 HELIX 22 22 ARG B 143 LEU B 155 1 13 HELIX 23 23 LEU B 155 ALA B 170 1 16 HELIX 24 24 HIS B 172 GLN B 192 1 21 HELIX 25 25 HIS C 3 GLN C 7 5 5 HELIX 26 26 ASN C 9 TYR C 23 1 15 HELIX 27 27 ALA C 30 THR C 38 1 9 HELIX 28 28 GLY C 41 GLN C 45 5 5 HELIX 29 29 PRO C 49 GLN C 61 1 13 HELIX 30 30 THR C 67 VAL C 77 1 11 HELIX 31 31 GLY C 88 ASP C 93 1 6 HELIX 32 32 GLY C 100 LYS C 113 1 14 HELIX 33 33 HIS C 127 ASN C 141 1 15 HELIX 34 34 ARG C 143 LEU C 155 1 13 HELIX 35 35 LEU C 155 ALA C 170 1 16 HELIX 36 36 HIS C 172 SER C 191 1 20 HELIX 37 37 HIS D 3 GLN D 7 5 5 HELIX 38 38 ASN D 9 TYR D 23 1 15 HELIX 39 39 ALA D 30 THR D 38 1 9 HELIX 40 40 GLY D 41 GLN D 45 5 5 HELIX 41 41 PRO D 49 THR D 62 1 14 HELIX 42 42 THR D 67 VAL D 77 1 11 HELIX 43 43 TRP D 87 ASP D 93 1 7 HELIX 44 44 GLY D 100 LYS D 113 1 14 HELIX 45 45 HIS D 127 ASN D 141 1 15 HELIX 46 46 ARG D 143 LEU D 155 1 13 HELIX 47 47 LEU D 155 GLU D 171 1 17 HELIX 48 48 HIS D 172 GLN D 192 1 21 CISPEP 1 GLY A 78 PRO A 79 0 9.74 CISPEP 2 GLY B 78 PRO B 79 0 8.82 CISPEP 3 GLY C 78 PRO C 79 0 18.96 CISPEP 4 GLY D 78 PRO D 79 0 13.11 CRYST1 97.449 97.449 210.042 90.00 90.00 90.00 P 41 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010262 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010262 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004761 0.00000