HEADER OXIDOREDUCTASE 24-APR-08 3CXK TITLE 1.7 A CRYSTAL STRUCTURE OF METHIONINE-R-SULFOXIDE REDUCTASE FROM TITLE 2 BURKHOLDERIA PSEUDOMALLEI: CRYSTALLIZATION IN A MICROFLUIDIC CRYSTAL TITLE 3 CARD. COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHIONINE-R-SULFOXIDE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.8.4.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI STRAIN; SOURCE 3 STRAIN: 1710B; SOURCE 4 GENE: MSRB, BURPS1710B_2458, YP_333853; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS STRUCTURAL GENOMICS, BURKHOLDERIA, MSRB, OXIDOREDUCTASE, MICROFLUIDIC KEYWDS 2 LABCARD, PSI-2, PROTEIN STRUCTURE INITIATIVE, ACCELERATED KEYWDS 3 TECHNOLOGIES CENTER FOR GENE TO 3D STRUCTURE, ATCG3D, SEATTLE KEYWDS 4 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID EXPDTA X-RAY DIFFRACTION AUTHOR S.LOVELL,C.GERDTS,B.STAKER,D.CRAIGEN,L.STEWART,ACCELERATED AUTHOR 2 TECHNOLOGIES CENTER FOR GENE TO 3D STRUCTURE (ATCG3D),SEATTLE AUTHOR 3 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 7 30-AUG-23 3CXK 1 REMARK SEQADV REVDAT 6 25-OCT-17 3CXK 1 REMARK REVDAT 5 13-JUL-11 3CXK 1 VERSN REVDAT 4 01-SEP-09 3CXK 1 AUTHOR JRNL REMARK TITLE REVDAT 3 24-FEB-09 3CXK 1 VERSN REVDAT 2 01-JUL-08 3CXK 1 AUTHOR KEYWDS REVDAT 1 27-MAY-08 3CXK 0 JRNL AUTH C.J.GERDTS,M.ELLIOTT,S.LOVELL,M.B.MIXON,A.J.NAPULI, JRNL AUTH 2 B.L.STAKER,P.NOLLERT,L.STEWART JRNL TITL THE PLUG-BASED NANOVOLUME MICROCAPILLARY PROTEIN JRNL TITL 2 CRYSTALLIZATION SYSTEM (MPCS). JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 64 1116 2008 JRNL REFN ISSN 0907-4449 JRNL PMID 19020349 JRNL DOI 10.1107/S0907444908028060 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.4.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 32478 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1650 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2071 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2120 REMARK 3 BIN FREE R VALUE SET COUNT : 109 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2068 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.31000 REMARK 3 B12 (A**2) : -1.35000 REMARK 3 B13 (A**2) : 1.06000 REMARK 3 B23 (A**2) : -0.27000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.094 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.850 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2152 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1459 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2925 ; 1.408 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3537 ; 0.933 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 268 ; 6.049 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;31.666 ;23.519 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 329 ;11.730 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;13.786 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 297 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2458 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 458 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1320 ; 1.012 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 532 ; 0.279 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2123 ; 1.781 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 832 ; 2.684 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 798 ; 4.298 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3CXK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979315 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32539 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.42300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3CEZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% MPD, 0.1M ACETATE, 25% PEG 1500, REMARK 280 PH 4.5, MICROFLUIDIC MICROBATCH IN A CRYSTAL CARD, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS THE SAME AS REMARK 300 ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 ASP A 4 REMARK 465 ARG A 5 REMARK 465 ASP A 6 REMARK 465 ASP A 7 REMARK 465 PRO A 8 REMARK 465 ARG A 9 REMARK 465 GLU A 141 REMARK 465 ARG A 142 REMARK 465 LYS A 143 REMARK 465 MET B -20 REMARK 465 ALA B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 MET B -12 REMARK 465 GLY B -11 REMARK 465 THR B -10 REMARK 465 LEU B -9 REMARK 465 GLU B -8 REMARK 465 ALA B -7 REMARK 465 GLN B -6 REMARK 465 THR B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLY B 3 REMARK 465 ASP B 4 REMARK 465 ARG B 5 REMARK 465 ASP B 6 REMARK 465 ASP B 7 REMARK 465 PRO B 8 REMARK 465 ARG B 9 REMARK 465 GLU B 141 REMARK 465 ARG B 142 REMARK 465 LYS B 143 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 326 O HOH A 392 2.13 REMARK 500 O HOH A 372 O HOH A 388 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 122 -110.96 -130.18 REMARK 500 LYS B 122 -120.89 -130.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 55 SG REMARK 620 2 CYS A 58 SG 109.9 REMARK 620 3 CYS A 104 SG 111.5 102.4 REMARK 620 4 CYS A 107 SG 105.6 116.5 111.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 55 SG REMARK 620 2 CYS B 58 SG 110.1 REMARK 620 3 CYS B 104 SG 110.7 103.8 REMARK 620 4 CYS B 107 SG 105.1 116.6 110.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CEZ RELATED DB: PDB REMARK 900 SAME PROTEIN REFINED TO 2.1 A RESOLUTION REMARK 900 RELATED ID: ATCG3D_20 RELATED DB: TARGETDB REMARK 900 RELATED ID: BUPSA.00033.A RELATED DB: TARGETDB DBREF 3CXK A 1 143 UNP Q3JRF0 Q3JRF0_BURP1 1 143 DBREF 3CXK B 1 143 UNP Q3JRF0 Q3JRF0_BURP1 1 143 SEQADV 3CXK MET A -20 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK ALA A -19 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS A -18 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS A -17 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS A -16 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS A -15 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS A -14 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS A -13 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK MET A -12 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLY A -11 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK THR A -10 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK LEU A -9 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLU A -8 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK ALA A -7 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLN A -6 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK THR A -5 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLN A -4 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLY A -3 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK PRO A -2 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLY A -1 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK SER A 0 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK MET B -20 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK ALA B -19 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS B -18 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS B -17 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS B -16 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS B -15 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS B -14 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK HIS B -13 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK MET B -12 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLY B -11 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK THR B -10 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK LEU B -9 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLU B -8 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK ALA B -7 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLN B -6 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK THR B -5 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLN B -4 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLY B -3 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK PRO B -2 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK GLY B -1 UNP Q3JRF0 EXPRESSION TAG SEQADV 3CXK SER B 0 UNP Q3JRF0 EXPRESSION TAG SEQRES 1 A 164 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 164 ALA GLN THR GLN GLY PRO GLY SER MET SER GLY ASP ARG SEQRES 3 A 164 ASP ASP PRO ARG TYR PRO TYR PRO LYS ASP ASP ALA GLU SEQRES 4 A 164 LEU ARG ARG ARG LEU THR PRO MET GLN TYR GLU VAL THR SEQRES 5 A 164 GLN HIS ALA ALA THR GLU PRO PRO PHE THR GLY GLU TYR SEQRES 6 A 164 THR ASP THR GLU ASP ALA GLY ILE TYR HIS CYS VAL VAL SEQRES 7 A 164 CYS GLY THR ALA LEU PHE GLU SER GLY ALA LYS TYR HIS SEQRES 8 A 164 SER GLY CYS GLY TRP PRO SER TYR PHE LYS PRO ILE ASP SEQRES 9 A 164 GLY GLU VAL ILE ASP GLU LYS MET ASP TYR THR HIS GLY SEQRES 10 A 164 MET THR ARG VAL GLU VAL ARG CYS ASN GLN CYS GLY ALA SEQRES 11 A 164 HIS LEU GLY HIS VAL PHE GLU ASP GLY PRO ARG ASP LYS SEQRES 12 A 164 THR GLY LEU ARG TYR CYS ILE ASN SER ALA ALA LEU ASN SEQRES 13 A 164 PHE GLU ALA LYS PRO GLU ARG LYS SEQRES 1 B 164 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 B 164 ALA GLN THR GLN GLY PRO GLY SER MET SER GLY ASP ARG SEQRES 3 B 164 ASP ASP PRO ARG TYR PRO TYR PRO LYS ASP ASP ALA GLU SEQRES 4 B 164 LEU ARG ARG ARG LEU THR PRO MET GLN TYR GLU VAL THR SEQRES 5 B 164 GLN HIS ALA ALA THR GLU PRO PRO PHE THR GLY GLU TYR SEQRES 6 B 164 THR ASP THR GLU ASP ALA GLY ILE TYR HIS CYS VAL VAL SEQRES 7 B 164 CYS GLY THR ALA LEU PHE GLU SER GLY ALA LYS TYR HIS SEQRES 8 B 164 SER GLY CYS GLY TRP PRO SER TYR PHE LYS PRO ILE ASP SEQRES 9 B 164 GLY GLU VAL ILE ASP GLU LYS MET ASP TYR THR HIS GLY SEQRES 10 B 164 MET THR ARG VAL GLU VAL ARG CYS ASN GLN CYS GLY ALA SEQRES 11 B 164 HIS LEU GLY HIS VAL PHE GLU ASP GLY PRO ARG ASP LYS SEQRES 12 B 164 THR GLY LEU ARG TYR CYS ILE ASN SER ALA ALA LEU ASN SEQRES 13 B 164 PHE GLU ALA LYS PRO GLU ARG LYS HET ZN A 201 1 HET ACT A 202 4 HET ZN B 201 1 HET ACT B 202 4 HETNAM ZN ZINC ION HETNAM ACT ACETATE ION FORMUL 3 ZN 2(ZN 2+) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 7 HOH *180(H2 O) HELIX 1 1 ASP A 15 LEU A 23 1 9 HELIX 2 2 THR A 24 ALA A 34 1 11 HELIX 3 3 GLY A 66 LYS A 68 5 3 HELIX 4 4 TYR A 93 MET A 97 5 5 HELIX 5 5 ASP B 15 LEU B 23 1 9 HELIX 6 6 THR B 24 ALA B 34 1 11 HELIX 7 7 GLY B 66 LYS B 68 5 3 HELIX 8 8 ASP B 83 GLU B 85 5 3 HELIX 9 9 TYR B 93 MET B 97 5 5 SHEET 1 A 3 ALA A 61 GLU A 64 0 SHEET 2 A 3 GLY A 51 CYS A 55 -1 N TYR A 53 O PHE A 63 SHEET 3 A 3 LEU A 134 ALA A 138 -1 O ASN A 135 N HIS A 54 SHEET 1 B 5 SER A 77 TYR A 78 0 SHEET 2 B 5 ARG A 126 ILE A 129 -1 O TYR A 127 N TYR A 78 SHEET 3 B 5 HIS A 110 PHE A 115 -1 N HIS A 113 O CYS A 128 SHEET 4 B 5 ARG A 99 CYS A 104 -1 N VAL A 102 O LEU A 111 SHEET 5 B 5 ILE A 87 ASP A 92 -1 N ASP A 92 O ARG A 99 SHEET 1 C 3 ALA B 61 GLU B 64 0 SHEET 2 C 3 GLY B 51 CYS B 55 -1 N TYR B 53 O PHE B 63 SHEET 3 C 3 LEU B 134 ALA B 138 -1 O GLU B 137 N ILE B 52 SHEET 1 D 5 SER B 77 TYR B 78 0 SHEET 2 D 5 ARG B 126 ILE B 129 -1 O TYR B 127 N TYR B 78 SHEET 3 D 5 HIS B 110 PHE B 115 -1 N HIS B 113 O CYS B 128 SHEET 4 D 5 ARG B 99 CYS B 104 -1 N VAL B 102 O LEU B 111 SHEET 5 D 5 ILE B 87 ASP B 92 -1 N LYS B 90 O GLU B 101 LINK SG CYS A 55 ZN ZN A 201 1555 1555 2.33 LINK SG CYS A 58 ZN ZN A 201 1555 1555 2.30 LINK SG CYS A 104 ZN ZN A 201 1555 1555 2.42 LINK SG CYS A 107 ZN ZN A 201 1555 1555 2.32 LINK SG CYS B 55 ZN ZN B 201 1555 1555 2.34 LINK SG CYS B 58 ZN ZN B 201 1555 1555 2.30 LINK SG CYS B 104 ZN ZN B 201 1555 1555 2.34 LINK SG CYS B 107 ZN ZN B 201 1555 1555 2.36 SITE 1 AC1 4 CYS A 55 CYS A 58 CYS A 104 CYS A 107 SITE 1 AC2 4 CYS B 55 CYS B 58 CYS B 104 CYS B 107 SITE 1 AC3 3 GLY A 112 HIS A 113 CYS A 128 SITE 1 AC4 3 GLY B 112 HIS B 113 CYS B 128 CRYST1 41.997 45.171 45.402 88.41 83.73 69.10 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023811 -0.009094 -0.002728 0.00000 SCALE2 0.000000 0.023698 0.000286 0.00000 SCALE3 0.000000 0.000000 0.022160 0.00000 CONECT 378 2085 CONECT 398 2085 CONECT 767 2085 CONECT 790 2085 CONECT 1421 2090 CONECT 1441 2090 CONECT 1805 2090 CONECT 1828 2090 CONECT 2085 378 398 767 790 CONECT 2086 2087 2088 2089 CONECT 2087 2086 CONECT 2088 2086 CONECT 2089 2086 CONECT 2090 1421 1441 1805 1828 CONECT 2091 2092 2093 2094 CONECT 2092 2091 CONECT 2093 2091 CONECT 2094 2091 MASTER 388 0 4 9 16 0 4 6 2258 2 18 26 END