data_3CXM # _entry.id 3CXM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CXM pdb_00003cxm 10.2210/pdb3cxm/pdb RCSB RCSB047337 ? ? WWPDB D_1000047337 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id Lnai002302AAC _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3CXM _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-04-24 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Larson, E.T.' 1 'Merritt, E.A.' 2 'Structural Genomics of Pathogenic Protozoa Consortium (SGPP)' 3 # _citation.id primary _citation.title ;Structures of Leishmania naiffi uracil-DNA glycosylase in complex with several ligands identified with fragment cocktail crystallography. ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Larson, E.T.' 1 ? primary 'Merritt, E.A.' 2 ? # _cell.length_a 75.320 _cell.length_b 75.320 _cell.length_c 105.703 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3CXM _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61' _symmetry.entry_id 3CXM _symmetry.Int_Tables_number 169 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uracil-DNA glycosylase' 30285.660 1 3.2.2.- ? 'Residues 129-373' ? 2 non-polymer syn 'BROMIDE ION' 79.904 1 ? ? ? ? 3 non-polymer syn '5-bromopyrimidine-2,4(1H,3H)-dione' 190.983 1 ? ? ? ? 4 non-polymer syn URACIL 112.087 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 water nat water 18.015 240 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAHHHHHHMGTLEAQTQGPGSMMSVSSSRWLAGLITNPEWRDFLAPITADSWRKGAFIRIERFLDEEKEKGRVILPPAAD IFNAFNSCPFRGLKVVLLGQDPYHDLHQAHGLCFSVLPEVPLPPSLRNIYKELTTDIAGFQAPKHGYLQSWSEQGMLMLN ATLTVEAHKANSHSKTSGWAAFTDAVIQHLSQHHPNRLVFLLWGGYAQQKKRLIDANRHVVLENVHPSPLSANRGWFGCR CFSACNEALQRMSHLPMHWQLPLNAPLH ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHMGTLEAQTQGPGSMMSVSSSRWLAGLITNPEWRDFLAPITADSWRKGAFIRIERFLDEEKEKGRVILPPAAD IFNAFNSCPFRGLKVVLLGQDPYHDLHQAHGLCFSVLPEVPLPPSLRNIYKELTTDIAGFQAPKHGYLQSWSEQGMLMLN ATLTVEAHKANSHSKTSGWAAFTDAVIQHLSQHHPNRLVFLLWGGYAQQKKRLIDANRHVVLENVHPSPLSANRGWFGCR CFSACNEALQRMSHLPMHWQLPLNAPLH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier Lnai002302AAC # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 MET n 1 10 GLY n 1 11 THR n 1 12 LEU n 1 13 GLU n 1 14 ALA n 1 15 GLN n 1 16 THR n 1 17 GLN n 1 18 GLY n 1 19 PRO n 1 20 GLY n 1 21 SER n 1 22 MET n 1 23 MET n 1 24 SER n 1 25 VAL n 1 26 SER n 1 27 SER n 1 28 SER n 1 29 ARG n 1 30 TRP n 1 31 LEU n 1 32 ALA n 1 33 GLY n 1 34 LEU n 1 35 ILE n 1 36 THR n 1 37 ASN n 1 38 PRO n 1 39 GLU n 1 40 TRP n 1 41 ARG n 1 42 ASP n 1 43 PHE n 1 44 LEU n 1 45 ALA n 1 46 PRO n 1 47 ILE n 1 48 THR n 1 49 ALA n 1 50 ASP n 1 51 SER n 1 52 TRP n 1 53 ARG n 1 54 LYS n 1 55 GLY n 1 56 ALA n 1 57 PHE n 1 58 ILE n 1 59 ARG n 1 60 ILE n 1 61 GLU n 1 62 ARG n 1 63 PHE n 1 64 LEU n 1 65 ASP n 1 66 GLU n 1 67 GLU n 1 68 LYS n 1 69 GLU n 1 70 LYS n 1 71 GLY n 1 72 ARG n 1 73 VAL n 1 74 ILE n 1 75 LEU n 1 76 PRO n 1 77 PRO n 1 78 ALA n 1 79 ALA n 1 80 ASP n 1 81 ILE n 1 82 PHE n 1 83 ASN n 1 84 ALA n 1 85 PHE n 1 86 ASN n 1 87 SER n 1 88 CYS n 1 89 PRO n 1 90 PHE n 1 91 ARG n 1 92 GLY n 1 93 LEU n 1 94 LYS n 1 95 VAL n 1 96 VAL n 1 97 LEU n 1 98 LEU n 1 99 GLY n 1 100 GLN n 1 101 ASP n 1 102 PRO n 1 103 TYR n 1 104 HIS n 1 105 ASP n 1 106 LEU n 1 107 HIS n 1 108 GLN n 1 109 ALA n 1 110 HIS n 1 111 GLY n 1 112 LEU n 1 113 CYS n 1 114 PHE n 1 115 SER n 1 116 VAL n 1 117 LEU n 1 118 PRO n 1 119 GLU n 1 120 VAL n 1 121 PRO n 1 122 LEU n 1 123 PRO n 1 124 PRO n 1 125 SER n 1 126 LEU n 1 127 ARG n 1 128 ASN n 1 129 ILE n 1 130 TYR n 1 131 LYS n 1 132 GLU n 1 133 LEU n 1 134 THR n 1 135 THR n 1 136 ASP n 1 137 ILE n 1 138 ALA n 1 139 GLY n 1 140 PHE n 1 141 GLN n 1 142 ALA n 1 143 PRO n 1 144 LYS n 1 145 HIS n 1 146 GLY n 1 147 TYR n 1 148 LEU n 1 149 GLN n 1 150 SER n 1 151 TRP n 1 152 SER n 1 153 GLU n 1 154 GLN n 1 155 GLY n 1 156 MET n 1 157 LEU n 1 158 MET n 1 159 LEU n 1 160 ASN n 1 161 ALA n 1 162 THR n 1 163 LEU n 1 164 THR n 1 165 VAL n 1 166 GLU n 1 167 ALA n 1 168 HIS n 1 169 LYS n 1 170 ALA n 1 171 ASN n 1 172 SER n 1 173 HIS n 1 174 SER n 1 175 LYS n 1 176 THR n 1 177 SER n 1 178 GLY n 1 179 TRP n 1 180 ALA n 1 181 ALA n 1 182 PHE n 1 183 THR n 1 184 ASP n 1 185 ALA n 1 186 VAL n 1 187 ILE n 1 188 GLN n 1 189 HIS n 1 190 LEU n 1 191 SER n 1 192 GLN n 1 193 HIS n 1 194 HIS n 1 195 PRO n 1 196 ASN n 1 197 ARG n 1 198 LEU n 1 199 VAL n 1 200 PHE n 1 201 LEU n 1 202 LEU n 1 203 TRP n 1 204 GLY n 1 205 GLY n 1 206 TYR n 1 207 ALA n 1 208 GLN n 1 209 GLN n 1 210 LYS n 1 211 LYS n 1 212 ARG n 1 213 LEU n 1 214 ILE n 1 215 ASP n 1 216 ALA n 1 217 ASN n 1 218 ARG n 1 219 HIS n 1 220 VAL n 1 221 VAL n 1 222 LEU n 1 223 GLU n 1 224 ASN n 1 225 VAL n 1 226 HIS n 1 227 PRO n 1 228 SER n 1 229 PRO n 1 230 LEU n 1 231 SER n 1 232 ALA n 1 233 ASN n 1 234 ARG n 1 235 GLY n 1 236 TRP n 1 237 PHE n 1 238 GLY n 1 239 CYS n 1 240 ARG n 1 241 CYS n 1 242 PHE n 1 243 SER n 1 244 ALA n 1 245 CYS n 1 246 ASN n 1 247 GLU n 1 248 ALA n 1 249 LEU n 1 250 GLN n 1 251 ARG n 1 252 MET n 1 253 SER n 1 254 HIS n 1 255 LEU n 1 256 PRO n 1 257 MET n 1 258 HIS n 1 259 TRP n 1 260 GLN n 1 261 LEU n 1 262 PRO n 1 263 LEU n 1 264 ASN n 1 265 ALA n 1 266 PRO n 1 267 LEU n 1 268 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Leishmania _entity_src_gen.pdbx_gene_src_gene 'similar to LbrM18_V2.0540' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Leishmania naiffi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5678 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name AVA0421 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3CXM _struct_ref.pdbx_db_accession 3CXM _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SVSSSRWLAGLITNPEWRDFLAPITADSWRKGAFIRIERFLDEEKEKGRVILPPAADIFNAFNSCPFRGLKVVLLGQDPY HDLHQAHGLCFSVLPEVPLPPSLRNIYKELTTDIAGFQAPKHGYLQSWSEQGMLMLNATLTVEAHKANSHSKTSGWAAFT DAVIQHLSQHHPNRLVFLLWGGYAQQKKRLIDANRHVVLENVHPSPLSANRGWFGCRCFSACNEALQRMSHLPMHWQLPL NAPLH ; _struct_ref.pdbx_align_begin 129 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3CXM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 268 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3CXM _struct_ref_seq.db_align_beg 129 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 373 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 129 _struct_ref_seq.pdbx_auth_seq_align_end 373 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CXM MET A 1 ? PDB 3CXM ? ? 'expression tag' -22 1 1 3CXM ALA A 2 ? PDB 3CXM ? ? 'expression tag' -21 2 1 3CXM HIS A 3 ? PDB 3CXM ? ? 'expression tag' -20 3 1 3CXM HIS A 4 ? PDB 3CXM ? ? 'expression tag' -19 4 1 3CXM HIS A 5 ? PDB 3CXM ? ? 'expression tag' -18 5 1 3CXM HIS A 6 ? PDB 3CXM ? ? 'expression tag' -17 6 1 3CXM HIS A 7 ? PDB 3CXM ? ? 'expression tag' -16 7 1 3CXM HIS A 8 ? PDB 3CXM ? ? 'expression tag' -15 8 1 3CXM MET A 9 ? PDB 3CXM ? ? 'expression tag' -14 9 1 3CXM GLY A 10 ? PDB 3CXM ? ? 'expression tag' -13 10 1 3CXM THR A 11 ? PDB 3CXM ? ? 'expression tag' -12 11 1 3CXM LEU A 12 ? PDB 3CXM ? ? 'expression tag' -11 12 1 3CXM GLU A 13 ? PDB 3CXM ? ? 'expression tag' -10 13 1 3CXM ALA A 14 ? PDB 3CXM ? ? 'expression tag' -9 14 1 3CXM GLN A 15 ? PDB 3CXM ? ? 'expression tag' -8 15 1 3CXM THR A 16 ? PDB 3CXM ? ? 'expression tag' -7 16 1 3CXM GLN A 17 ? PDB 3CXM ? ? 'expression tag' -6 17 1 3CXM GLY A 18 ? PDB 3CXM ? ? 'expression tag' -5 18 1 3CXM PRO A 19 ? PDB 3CXM ? ? 'expression tag' -4 19 1 3CXM GLY A 20 ? PDB 3CXM ? ? 'expression tag' -3 20 1 3CXM SER A 21 ? PDB 3CXM ? ? 'expression tag' -2 21 1 3CXM MET A 22 ? PDB 3CXM ? ? 'expression tag' -1 22 1 3CXM MET A 23 ? PDB 3CXM ? ? 'expression tag' 0 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BR non-polymer . 'BROMIDE ION' ? 'Br -1' 79.904 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 URA non-polymer . URACIL ? 'C4 H4 N2 O2' 112.087 URB non-polymer . '5-bromopyrimidine-2,4(1H,3H)-dione' 5-bromouracil 'C4 H3 Br N2 O2' 190.983 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3CXM _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 56.96 _exptl_crystal.description ;1. The Blu-ice software package was used for data collection. The reference is: McPhillips T.M., McPhillips S.E., Chiu H.J., Cohen A.E., Deacon A.M., Ellis P.J., Garman E., Gonzalez A., Sauter N.K., Phizackerley R.P., Soltis S.M., Kuhn P., Blu-Ice and the Distributed Control System: software for data acquisition and instrument control at macromolecular crystallography beamlines. J.Synchrotron Radiat. 2002 Nov 1, 9(Pt 6):401-6. Epub 2002 Nov 1. PMID: 12409628. 2. The TLS motion determination server (http://skuld.bmsc.washington.edu/~tlsmd/) was used for selection of the TLS groups used in refinement. The reference is: Painter J. and Merritt E.A., TLSMD web server for the generation of multi-group TLS models. J.Appl.Cryst. 2006 Feb, 39(Pt 1):109-111. Epub 2006 Jan 12. ; _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '1.3 M Potassium phosphate dibasic, 0.1 M Sodium acetate pH 4.5, 5 mM DTT, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2007-03-28 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double crystal Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91724 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91724 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 # _reflns.entry_id 3CXM _reflns.d_resolution_high 1.500 _reflns.d_resolution_low 50.000 _reflns.number_obs 52821 _reflns.pdbx_Rmerge_I_obs 0.045 _reflns.pdbx_netI_over_sigmaI 14.300 _reflns.pdbx_chi_squared 0.978 _reflns.pdbx_redundancy 10.200 _reflns.percent_possible_obs 97.200 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 21.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.55 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.620 _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.979 _reflns_shell.pdbx_redundancy 5.30 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4325 _reflns_shell.percent_possible_all 79.90 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3CXM _refine.ls_d_res_high 1.500 _refine.ls_d_res_low 37.660 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 97.210 _refine.ls_number_reflns_obs 52760 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_obs 0.139 _refine.ls_R_factor_R_work 0.138 _refine.ls_wR_factor_R_work 0.133 _refine.ls_R_factor_R_free 0.160 _refine.ls_wR_factor_R_free 0.155 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2693 _refine.B_iso_mean 15.353 _refine.aniso_B[1][1] 0.340 _refine.aniso_B[2][2] 0.340 _refine.aniso_B[3][3] -0.520 _refine.aniso_B[1][2] 0.170 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.982 _refine.correlation_coeff_Fo_to_Fc_free 0.977 _refine.pdbx_overall_ESU_R 0.050 _refine.pdbx_overall_ESU_R_Free 0.053 _refine.overall_SU_ML 0.042 _refine.overall_SU_B 2.276 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB entry 1EUI' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details '1. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 2. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1933 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 240 _refine_hist.number_atoms_total 2197 _refine_hist.d_res_high 1.500 _refine_hist.d_res_low 37.660 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2108 0.018 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1471 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2883 1.623 1.941 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3571 0.974 3.001 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 267 5.926 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 104 36.475 22.981 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 347 11.752 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18 20.401 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 301 0.103 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2374 0.009 0.021 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 456 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1257 2.033 4.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 495 0.682 4.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2038 3.259 6.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 851 4.406 6.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 832 7.073 10.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id 20 1.539 1.500 4029 76.793 2932 0.256 162 0.288 . . . . . 'X-RAY DIFFRACTION' 20 1.581 1.539 3874 90.165 3291 0.235 202 0.252 . . . . . 'X-RAY DIFFRACTION' 20 1.627 1.581 3795 95.573 3442 0.214 185 0.241 . . . . . 'X-RAY DIFFRACTION' 20 1.677 1.627 3693 99.404 3510 0.189 161 0.245 . . . . . 'X-RAY DIFFRACTION' 20 1.732 1.677 3544 99.915 3372 0.172 169 0.218 . . . . . 'X-RAY DIFFRACTION' 20 1.792 1.732 3482 99.943 3301 0.161 179 0.183 . . . . . 'X-RAY DIFFRACTION' 20 1.860 1.792 3304 99.970 3124 0.145 179 0.177 . . . . . 'X-RAY DIFFRACTION' 20 1.936 1.860 3236 99.969 3072 0.142 163 0.152 . . . . . 'X-RAY DIFFRACTION' 20 2.022 1.936 3064 100.000 2904 0.136 160 0.149 . . . . . 'X-RAY DIFFRACTION' 20 2.120 2.022 2938 100.000 2778 0.136 160 0.168 . . . . . 'X-RAY DIFFRACTION' 20 2.234 2.120 2805 100.000 2669 0.124 136 0.140 . . . . . 'X-RAY DIFFRACTION' 20 2.369 2.234 2651 99.962 2520 0.123 130 0.168 . . . . . 'X-RAY DIFFRACTION' 20 2.532 2.369 2485 100.000 2367 0.132 118 0.154 . . . . . 'X-RAY DIFFRACTION' 20 2.734 2.532 2332 100.000 2195 0.136 137 0.157 . . . . . 'X-RAY DIFFRACTION' 20 2.993 2.734 2142 100.000 2023 0.135 119 0.159 . . . . . 'X-RAY DIFFRACTION' 20 3.344 2.993 1944 100.000 1850 0.130 94 0.133 . . . . . 'X-RAY DIFFRACTION' 20 3.856 3.344 1707 100.000 1643 0.113 64 0.157 . . . . . 'X-RAY DIFFRACTION' 20 4.710 3.856 1464 100.000 1376 0.108 88 0.122 . . . . . 'X-RAY DIFFRACTION' 20 6.610 4.710 1134 100.000 1078 0.139 56 0.151 . . . . . 'X-RAY DIFFRACTION' 20 37.662 6.610 653 99.694 620 0.159 31 0.152 . . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3CXM _struct.title 'Leishmania naiffi uracil-DNA glycosylase in complex with 5-bromouracil' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CXM _struct_keywords.text ;base excision repair, BER, DNA damage repair, Leishmania, MSGPP, SGPP, glycosylase, hydrolase, 5-bromouracil, Structural Genomics, Structural Genomics of Pathogenic Protozoa Consortium, DNA repair, Glycosidase, PSI-2, Protein Structure Initiative ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 31 ? ILE A 35 ? LEU A 136 ILE A 140 5 ? 5 HELX_P HELX_P2 2 ASN A 37 ? ALA A 49 ? ASN A 142 ALA A 154 1 ? 13 HELX_P HELX_P3 3 GLY A 55 ? LYS A 70 ? GLY A 160 LYS A 175 1 ? 16 HELX_P HELX_P4 4 PRO A 77 ? ILE A 81 ? PRO A 182 ILE A 186 5 ? 5 HELX_P HELX_P5 5 PHE A 82 ? SER A 87 ? PHE A 187 SER A 192 1 ? 6 HELX_P HELX_P6 6 PRO A 123 ? ILE A 137 ? PRO A 228 ILE A 242 1 ? 15 HELX_P HELX_P7 7 LEU A 148 ? GLU A 153 ? LEU A 253 GLU A 258 1 ? 6 HELX_P HELX_P8 8 GLY A 178 ? HIS A 194 ? GLY A 283 HIS A 299 1 ? 17 HELX_P HELX_P9 9 GLY A 204 ? GLN A 209 ? GLY A 309 GLN A 314 1 ? 6 HELX_P HELX_P10 10 LYS A 210 ? ILE A 214 ? LYS A 315 ILE A 319 5 ? 5 HELX_P HELX_P11 11 SER A 228 ? ASN A 233 ? SER A 333 ASN A 338 1 ? 6 HELX_P HELX_P12 12 ARG A 240 ? MET A 252 ? ARG A 345 MET A 357 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 75 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 180 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 76 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 181 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -12.39 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 74 ? LEU A 75 ? ILE A 179 LEU A 180 A 2 VAL A 165 ? GLU A 166 ? VAL A 270 GLU A 271 B 1 MET A 156 ? ASN A 160 ? MET A 261 ASN A 265 B 2 VAL A 95 ? GLY A 99 ? VAL A 200 GLY A 204 B 3 VAL A 199 ? TRP A 203 ? VAL A 304 TRP A 308 B 4 VAL A 220 ? ASN A 224 ? VAL A 325 ASN A 329 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 75 ? N LEU A 180 O VAL A 165 ? O VAL A 270 B 1 2 O LEU A 157 ? O LEU A 262 N VAL A 95 ? N VAL A 200 B 2 3 N VAL A 96 ? N VAL A 201 O LEU A 201 ? O LEU A 306 B 3 4 N PHE A 200 ? N PHE A 305 O VAL A 220 ? O VAL A 325 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BR 403 ? 2 'BINDING SITE FOR RESIDUE BR A 403' AC2 Software A URB 401 ? 10 'BINDING SITE FOR RESIDUE URB A 401' AC3 Software A URA 402 ? 9 'BINDING SITE FOR RESIDUE URA A 402' AC4 Software A GOL 404 ? 4 'BINDING SITE FOR RESIDUE GOL A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 PRO A 124 ? PRO A 229 . ? 1_555 ? 2 AC1 2 SER A 125 ? SER A 230 . ? 1_555 ? 3 AC2 10 GLY A 99 ? GLY A 204 . ? 1_555 ? 4 AC2 10 GLN A 100 ? GLN A 205 . ? 1_555 ? 5 AC2 10 ASP A 101 ? ASP A 206 . ? 1_555 ? 6 AC2 10 TYR A 103 ? TYR A 208 . ? 1_555 ? 7 AC2 10 CYS A 113 ? CYS A 218 . ? 1_555 ? 8 AC2 10 PHE A 114 ? PHE A 219 . ? 1_555 ? 9 AC2 10 ASN A 160 ? ASN A 265 . ? 1_555 ? 10 AC2 10 HIS A 226 ? HIS A 331 . ? 1_555 ? 11 AC2 10 HOH F . ? HOH A 600 . ? 1_555 ? 12 AC2 10 HOH F . ? HOH A 658 . ? 1_555 ? 13 AC3 9 GLY A 99 ? GLY A 204 . ? 1_555 ? 14 AC3 9 GLN A 100 ? GLN A 205 . ? 1_555 ? 15 AC3 9 ASP A 101 ? ASP A 206 . ? 1_555 ? 16 AC3 9 TYR A 103 ? TYR A 208 . ? 1_555 ? 17 AC3 9 CYS A 113 ? CYS A 218 . ? 1_555 ? 18 AC3 9 PHE A 114 ? PHE A 219 . ? 1_555 ? 19 AC3 9 ASN A 160 ? ASN A 265 . ? 1_555 ? 20 AC3 9 HOH F . ? HOH A 600 . ? 1_555 ? 21 AC3 9 HOH F . ? HOH A 658 . ? 1_555 ? 22 AC4 4 HIS A 168 ? HIS A 273 . ? 5_554 ? 23 AC4 4 PRO A 256 ? PRO A 361 . ? 1_555 ? 24 AC4 4 HIS A 258 ? HIS A 363 . ? 1_555 ? 25 AC4 4 HOH F . ? HOH A 513 . ? 5_554 ? # _atom_sites.entry_id 3CXM _atom_sites.fract_transf_matrix[1][1] 0.013277 _atom_sites.fract_transf_matrix[1][2] 0.007665 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015331 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009460 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -22 ? ? ? A . n A 1 2 ALA 2 -21 ? ? ? A . n A 1 3 HIS 3 -20 ? ? ? A . n A 1 4 HIS 4 -19 ? ? ? A . n A 1 5 HIS 5 -18 ? ? ? A . n A 1 6 HIS 6 -17 ? ? ? A . n A 1 7 HIS 7 -16 ? ? ? A . n A 1 8 HIS 8 -15 ? ? ? A . n A 1 9 MET 9 -14 ? ? ? A . n A 1 10 GLY 10 -13 ? ? ? A . n A 1 11 THR 11 -12 ? ? ? A . n A 1 12 LEU 12 -11 ? ? ? A . n A 1 13 GLU 13 -10 ? ? ? A . n A 1 14 ALA 14 -9 ? ? ? A . n A 1 15 GLN 15 -8 ? ? ? A . n A 1 16 THR 16 -7 ? ? ? A . n A 1 17 GLN 17 -6 ? ? ? A . n A 1 18 GLY 18 -5 ? ? ? A . n A 1 19 PRO 19 -4 ? ? ? A . n A 1 20 GLY 20 -3 ? ? ? A . n A 1 21 SER 21 -2 ? ? ? A . n A 1 22 MET 22 -1 ? ? ? A . n A 1 23 MET 23 0 ? ? ? A . n A 1 24 SER 24 129 ? ? ? A . n A 1 25 VAL 25 130 130 VAL VAL A . n A 1 26 SER 26 131 131 SER SER A . n A 1 27 SER 27 132 132 SER SER A . n A 1 28 SER 28 133 133 SER SER A . n A 1 29 ARG 29 134 134 ARG ARG A . n A 1 30 TRP 30 135 135 TRP TRP A . n A 1 31 LEU 31 136 136 LEU LEU A . n A 1 32 ALA 32 137 137 ALA ALA A . n A 1 33 GLY 33 138 138 GLY GLY A . n A 1 34 LEU 34 139 139 LEU LEU A . n A 1 35 ILE 35 140 140 ILE ILE A . n A 1 36 THR 36 141 141 THR THR A . n A 1 37 ASN 37 142 142 ASN ASN A . n A 1 38 PRO 38 143 143 PRO PRO A . n A 1 39 GLU 39 144 144 GLU GLU A . n A 1 40 TRP 40 145 145 TRP TRP A . n A 1 41 ARG 41 146 146 ARG ARG A . n A 1 42 ASP 42 147 147 ASP ASP A . n A 1 43 PHE 43 148 148 PHE PHE A . n A 1 44 LEU 44 149 149 LEU LEU A . n A 1 45 ALA 45 150 150 ALA ALA A . n A 1 46 PRO 46 151 151 PRO PRO A . n A 1 47 ILE 47 152 152 ILE ILE A . n A 1 48 THR 48 153 153 THR THR A . n A 1 49 ALA 49 154 154 ALA ALA A . n A 1 50 ASP 50 155 155 ASP ASP A . n A 1 51 SER 51 156 156 SER SER A . n A 1 52 TRP 52 157 157 TRP TRP A . n A 1 53 ARG 53 158 158 ARG ARG A . n A 1 54 LYS 54 159 159 LYS LYS A . n A 1 55 GLY 55 160 160 GLY GLY A . n A 1 56 ALA 56 161 161 ALA ALA A . n A 1 57 PHE 57 162 162 PHE PHE A . n A 1 58 ILE 58 163 163 ILE ILE A . n A 1 59 ARG 59 164 164 ARG ARG A . n A 1 60 ILE 60 165 165 ILE ILE A . n A 1 61 GLU 61 166 166 GLU GLU A . n A 1 62 ARG 62 167 167 ARG ARG A . n A 1 63 PHE 63 168 168 PHE PHE A . n A 1 64 LEU 64 169 169 LEU LEU A . n A 1 65 ASP 65 170 170 ASP ASP A . n A 1 66 GLU 66 171 171 GLU GLU A . n A 1 67 GLU 67 172 172 GLU GLU A . n A 1 68 LYS 68 173 173 LYS LYS A . n A 1 69 GLU 69 174 174 GLU GLU A . n A 1 70 LYS 70 175 175 LYS LYS A . n A 1 71 GLY 71 176 176 GLY GLY A . n A 1 72 ARG 72 177 177 ARG ARG A . n A 1 73 VAL 73 178 178 VAL VAL A . n A 1 74 ILE 74 179 179 ILE ILE A . n A 1 75 LEU 75 180 180 LEU LEU A . n A 1 76 PRO 76 181 181 PRO PRO A . n A 1 77 PRO 77 182 182 PRO PRO A . n A 1 78 ALA 78 183 183 ALA ALA A . n A 1 79 ALA 79 184 184 ALA ALA A . n A 1 80 ASP 80 185 185 ASP ASP A . n A 1 81 ILE 81 186 186 ILE ILE A . n A 1 82 PHE 82 187 187 PHE PHE A . n A 1 83 ASN 83 188 188 ASN ASN A . n A 1 84 ALA 84 189 189 ALA ALA A . n A 1 85 PHE 85 190 190 PHE PHE A . n A 1 86 ASN 86 191 191 ASN ASN A . n A 1 87 SER 87 192 192 SER SER A . n A 1 88 CYS 88 193 193 CYS CYS A . n A 1 89 PRO 89 194 194 PRO PRO A . n A 1 90 PHE 90 195 195 PHE PHE A . n A 1 91 ARG 91 196 196 ARG ARG A . n A 1 92 GLY 92 197 197 GLY GLY A . n A 1 93 LEU 93 198 198 LEU LEU A . n A 1 94 LYS 94 199 199 LYS LYS A . n A 1 95 VAL 95 200 200 VAL VAL A . n A 1 96 VAL 96 201 201 VAL VAL A . n A 1 97 LEU 97 202 202 LEU LEU A . n A 1 98 LEU 98 203 203 LEU LEU A . n A 1 99 GLY 99 204 204 GLY GLY A . n A 1 100 GLN 100 205 205 GLN GLN A . n A 1 101 ASP 101 206 206 ASP ASP A . n A 1 102 PRO 102 207 207 PRO PRO A . n A 1 103 TYR 103 208 208 TYR TYR A . n A 1 104 HIS 104 209 209 HIS HIS A . n A 1 105 ASP 105 210 210 ASP ASP A . n A 1 106 LEU 106 211 211 LEU LEU A . n A 1 107 HIS 107 212 212 HIS HIS A . n A 1 108 GLN 108 213 213 GLN GLN A . n A 1 109 ALA 109 214 214 ALA ALA A . n A 1 110 HIS 110 215 215 HIS HIS A . n A 1 111 GLY 111 216 216 GLY GLY A . n A 1 112 LEU 112 217 217 LEU LEU A . n A 1 113 CYS 113 218 218 CYS CYS A . n A 1 114 PHE 114 219 219 PHE PHE A . n A 1 115 SER 115 220 220 SER SER A . n A 1 116 VAL 116 221 221 VAL VAL A . n A 1 117 LEU 117 222 222 LEU LEU A . n A 1 118 PRO 118 223 223 PRO PRO A . n A 1 119 GLU 119 224 224 GLU GLU A . n A 1 120 VAL 120 225 225 VAL VAL A . n A 1 121 PRO 121 226 226 PRO PRO A . n A 1 122 LEU 122 227 227 LEU LEU A . n A 1 123 PRO 123 228 228 PRO PRO A . n A 1 124 PRO 124 229 229 PRO PRO A . n A 1 125 SER 125 230 230 SER SER A . n A 1 126 LEU 126 231 231 LEU LEU A . n A 1 127 ARG 127 232 232 ARG ARG A . n A 1 128 ASN 128 233 233 ASN ASN A . n A 1 129 ILE 129 234 234 ILE ILE A . n A 1 130 TYR 130 235 235 TYR TYR A . n A 1 131 LYS 131 236 236 LYS LYS A . n A 1 132 GLU 132 237 237 GLU GLU A . n A 1 133 LEU 133 238 238 LEU LEU A . n A 1 134 THR 134 239 239 THR THR A . n A 1 135 THR 135 240 240 THR THR A . n A 1 136 ASP 136 241 241 ASP ASP A . n A 1 137 ILE 137 242 242 ILE ILE A . n A 1 138 ALA 138 243 243 ALA ALA A . n A 1 139 GLY 139 244 244 GLY GLY A . n A 1 140 PHE 140 245 245 PHE PHE A . n A 1 141 GLN 141 246 246 GLN GLN A . n A 1 142 ALA 142 247 247 ALA ALA A . n A 1 143 PRO 143 248 248 PRO PRO A . n A 1 144 LYS 144 249 249 LYS LYS A . n A 1 145 HIS 145 250 250 HIS HIS A . n A 1 146 GLY 146 251 251 GLY GLY A . n A 1 147 TYR 147 252 252 TYR TYR A . n A 1 148 LEU 148 253 253 LEU LEU A . n A 1 149 GLN 149 254 254 GLN GLN A . n A 1 150 SER 150 255 255 SER SER A . n A 1 151 TRP 151 256 256 TRP TRP A . n A 1 152 SER 152 257 257 SER SER A . n A 1 153 GLU 153 258 258 GLU GLU A . n A 1 154 GLN 154 259 259 GLN GLN A . n A 1 155 GLY 155 260 260 GLY GLY A . n A 1 156 MET 156 261 261 MET MET A . n A 1 157 LEU 157 262 262 LEU LEU A . n A 1 158 MET 158 263 263 MET MET A . n A 1 159 LEU 159 264 264 LEU LEU A . n A 1 160 ASN 160 265 265 ASN ASN A . n A 1 161 ALA 161 266 266 ALA ALA A . n A 1 162 THR 162 267 267 THR THR A . n A 1 163 LEU 163 268 268 LEU LEU A . n A 1 164 THR 164 269 269 THR THR A . n A 1 165 VAL 165 270 270 VAL VAL A . n A 1 166 GLU 166 271 271 GLU GLU A . n A 1 167 ALA 167 272 272 ALA ALA A . n A 1 168 HIS 168 273 273 HIS HIS A . n A 1 169 LYS 169 274 274 LYS LYS A . n A 1 170 ALA 170 275 275 ALA ALA A . n A 1 171 ASN 171 276 276 ASN ASN A . n A 1 172 SER 172 277 277 SER SER A . n A 1 173 HIS 173 278 278 HIS HIS A . n A 1 174 SER 174 279 279 SER SER A . n A 1 175 LYS 175 280 280 LYS LYS A . n A 1 176 THR 176 281 281 THR THR A . n A 1 177 SER 177 282 282 SER SER A . n A 1 178 GLY 178 283 283 GLY GLY A . n A 1 179 TRP 179 284 284 TRP TRP A . n A 1 180 ALA 180 285 285 ALA ALA A . n A 1 181 ALA 181 286 286 ALA ALA A . n A 1 182 PHE 182 287 287 PHE PHE A . n A 1 183 THR 183 288 288 THR THR A . n A 1 184 ASP 184 289 289 ASP ASP A . n A 1 185 ALA 185 290 290 ALA ALA A . n A 1 186 VAL 186 291 291 VAL VAL A . n A 1 187 ILE 187 292 292 ILE ILE A . n A 1 188 GLN 188 293 293 GLN GLN A . n A 1 189 HIS 189 294 294 HIS HIS A . n A 1 190 LEU 190 295 295 LEU LEU A . n A 1 191 SER 191 296 296 SER SER A . n A 1 192 GLN 192 297 297 GLN GLN A . n A 1 193 HIS 193 298 298 HIS HIS A . n A 1 194 HIS 194 299 299 HIS HIS A . n A 1 195 PRO 195 300 300 PRO PRO A . n A 1 196 ASN 196 301 301 ASN ASN A . n A 1 197 ARG 197 302 302 ARG ARG A . n A 1 198 LEU 198 303 303 LEU LEU A . n A 1 199 VAL 199 304 304 VAL VAL A . n A 1 200 PHE 200 305 305 PHE PHE A . n A 1 201 LEU 201 306 306 LEU LEU A . n A 1 202 LEU 202 307 307 LEU LEU A . n A 1 203 TRP 203 308 308 TRP TRP A . n A 1 204 GLY 204 309 309 GLY GLY A . n A 1 205 GLY 205 310 310 GLY GLY A . n A 1 206 TYR 206 311 311 TYR TYR A . n A 1 207 ALA 207 312 312 ALA ALA A . n A 1 208 GLN 208 313 313 GLN GLN A . n A 1 209 GLN 209 314 314 GLN GLN A . n A 1 210 LYS 210 315 315 LYS LYS A . n A 1 211 LYS 211 316 316 LYS LYS A . n A 1 212 ARG 212 317 317 ARG ARG A . n A 1 213 LEU 213 318 318 LEU LEU A . n A 1 214 ILE 214 319 319 ILE ILE A . n A 1 215 ASP 215 320 320 ASP ASP A . n A 1 216 ALA 216 321 321 ALA ALA A . n A 1 217 ASN 217 322 322 ASN ASN A . n A 1 218 ARG 218 323 323 ARG ARG A . n A 1 219 HIS 219 324 324 HIS HIS A . n A 1 220 VAL 220 325 325 VAL VAL A . n A 1 221 VAL 221 326 326 VAL VAL A . n A 1 222 LEU 222 327 327 LEU LEU A . n A 1 223 GLU 223 328 328 GLU GLU A . n A 1 224 ASN 224 329 329 ASN ASN A . n A 1 225 VAL 225 330 330 VAL VAL A . n A 1 226 HIS 226 331 331 HIS HIS A . n A 1 227 PRO 227 332 332 PRO PRO A . n A 1 228 SER 228 333 333 SER SER A . n A 1 229 PRO 229 334 334 PRO PRO A . n A 1 230 LEU 230 335 335 LEU LEU A . n A 1 231 SER 231 336 336 SER SER A . n A 1 232 ALA 232 337 337 ALA ALA A . n A 1 233 ASN 233 338 338 ASN ASN A . n A 1 234 ARG 234 339 339 ARG ARG A . n A 1 235 GLY 235 340 340 GLY GLY A . n A 1 236 TRP 236 341 341 TRP TRP A . n A 1 237 PHE 237 342 342 PHE PHE A . n A 1 238 GLY 238 343 343 GLY GLY A . n A 1 239 CYS 239 344 344 CYS CYS A . n A 1 240 ARG 240 345 345 ARG ARG A . n A 1 241 CYS 241 346 346 CYS CYS A . n A 1 242 PHE 242 347 347 PHE PHE A . n A 1 243 SER 243 348 348 SER SER A . n A 1 244 ALA 244 349 349 ALA ALA A . n A 1 245 CYS 245 350 350 CYS CYS A . n A 1 246 ASN 246 351 351 ASN ASN A . n A 1 247 GLU 247 352 352 GLU GLU A . n A 1 248 ALA 248 353 353 ALA ALA A . n A 1 249 LEU 249 354 354 LEU LEU A . n A 1 250 GLN 250 355 355 GLN GLN A . n A 1 251 ARG 251 356 356 ARG ARG A . n A 1 252 MET 252 357 357 MET MET A . n A 1 253 SER 253 358 358 SER SER A . n A 1 254 HIS 254 359 359 HIS HIS A . n A 1 255 LEU 255 360 360 LEU LEU A . n A 1 256 PRO 256 361 361 PRO PRO A . n A 1 257 MET 257 362 362 MET MET A . n A 1 258 HIS 258 363 363 HIS HIS A . n A 1 259 TRP 259 364 364 TRP TRP A . n A 1 260 GLN 260 365 365 GLN GLN A . n A 1 261 LEU 261 366 366 LEU LEU A . n A 1 262 PRO 262 367 367 PRO PRO A . n A 1 263 LEU 263 368 368 LEU LEU A . n A 1 264 ASN 264 369 369 ASN ASN A . n A 1 265 ALA 265 370 370 ALA ALA A . n A 1 266 PRO 266 371 371 PRO PRO A . n A 1 267 LEU 267 372 ? ? ? A . n A 1 268 HIS 268 373 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Structural Genomics of Pathogenic Protozoa Consortium' _pdbx_SG_project.initial_of_center SGPP # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BR 1 403 403 BR BR A . C 3 URB 1 401 401 URB URB A . D 4 URA 1 402 402 URA URA A . E 5 GOL 1 404 404 GOL GOL A . F 6 HOH 1 501 501 HOH HOH A . F 6 HOH 2 502 2 HOH HOH A . F 6 HOH 3 503 3 HOH HOH A . F 6 HOH 4 504 4 HOH HOH A . F 6 HOH 5 505 5 HOH HOH A . F 6 HOH 6 506 6 HOH HOH A . F 6 HOH 7 507 7 HOH HOH A . F 6 HOH 8 508 8 HOH HOH A . F 6 HOH 9 509 9 HOH HOH A . F 6 HOH 10 510 10 HOH HOH A . F 6 HOH 11 511 11 HOH HOH A . F 6 HOH 12 512 12 HOH HOH A . F 6 HOH 13 513 13 HOH HOH A . F 6 HOH 14 514 14 HOH HOH A . F 6 HOH 15 515 15 HOH HOH A . F 6 HOH 16 516 16 HOH HOH A . F 6 HOH 17 517 17 HOH HOH A . F 6 HOH 18 518 18 HOH HOH A . F 6 HOH 19 519 19 HOH HOH A . F 6 HOH 20 520 20 HOH HOH A . F 6 HOH 21 521 21 HOH HOH A . F 6 HOH 22 522 22 HOH HOH A . F 6 HOH 23 523 23 HOH HOH A . F 6 HOH 24 524 24 HOH HOH A . F 6 HOH 25 525 25 HOH HOH A . F 6 HOH 26 526 26 HOH HOH A . F 6 HOH 27 527 27 HOH HOH A . F 6 HOH 28 528 28 HOH HOH A . F 6 HOH 29 529 29 HOH HOH A . F 6 HOH 30 530 30 HOH HOH A . F 6 HOH 31 531 31 HOH HOH A . F 6 HOH 32 532 32 HOH HOH A . F 6 HOH 33 533 33 HOH HOH A . F 6 HOH 34 534 34 HOH HOH A . F 6 HOH 35 535 35 HOH HOH A . F 6 HOH 36 536 36 HOH HOH A . F 6 HOH 37 537 37 HOH HOH A . F 6 HOH 38 538 38 HOH HOH A . F 6 HOH 39 539 39 HOH HOH A . F 6 HOH 40 540 40 HOH HOH A . F 6 HOH 41 541 41 HOH HOH A . F 6 HOH 42 542 42 HOH HOH A . F 6 HOH 43 543 43 HOH HOH A . F 6 HOH 44 544 44 HOH HOH A . F 6 HOH 45 545 45 HOH HOH A . F 6 HOH 46 546 46 HOH HOH A . F 6 HOH 47 547 47 HOH HOH A . F 6 HOH 48 548 48 HOH HOH A . F 6 HOH 49 549 49 HOH HOH A . F 6 HOH 50 550 50 HOH HOH A . F 6 HOH 51 551 51 HOH HOH A . F 6 HOH 52 552 52 HOH HOH A . F 6 HOH 53 553 53 HOH HOH A . F 6 HOH 54 554 54 HOH HOH A . F 6 HOH 55 555 55 HOH HOH A . F 6 HOH 56 556 56 HOH HOH A . F 6 HOH 57 557 57 HOH HOH A . F 6 HOH 58 558 58 HOH HOH A . F 6 HOH 59 559 59 HOH HOH A . F 6 HOH 60 560 60 HOH HOH A . F 6 HOH 61 561 61 HOH HOH A . F 6 HOH 62 562 62 HOH HOH A . F 6 HOH 63 563 63 HOH HOH A . F 6 HOH 64 564 64 HOH HOH A . F 6 HOH 65 565 65 HOH HOH A . F 6 HOH 66 566 66 HOH HOH A . F 6 HOH 67 567 67 HOH HOH A . F 6 HOH 68 568 68 HOH HOH A . F 6 HOH 69 569 69 HOH HOH A . F 6 HOH 70 570 70 HOH HOH A . F 6 HOH 71 571 71 HOH HOH A . F 6 HOH 72 572 72 HOH HOH A . F 6 HOH 73 573 73 HOH HOH A . F 6 HOH 74 574 74 HOH HOH A . F 6 HOH 75 575 75 HOH HOH A . F 6 HOH 76 576 76 HOH HOH A . F 6 HOH 77 577 77 HOH HOH A . F 6 HOH 78 578 78 HOH HOH A . F 6 HOH 79 579 79 HOH HOH A . F 6 HOH 80 580 80 HOH HOH A . F 6 HOH 81 581 81 HOH HOH A . F 6 HOH 82 582 82 HOH HOH A . F 6 HOH 83 583 83 HOH HOH A . F 6 HOH 84 584 84 HOH HOH A . F 6 HOH 85 585 85 HOH HOH A . F 6 HOH 86 586 86 HOH HOH A . F 6 HOH 87 587 87 HOH HOH A . F 6 HOH 88 588 88 HOH HOH A . F 6 HOH 89 589 89 HOH HOH A . F 6 HOH 90 590 90 HOH HOH A . F 6 HOH 91 591 91 HOH HOH A . F 6 HOH 92 592 92 HOH HOH A . F 6 HOH 93 593 93 HOH HOH A . F 6 HOH 94 594 94 HOH HOH A . F 6 HOH 95 595 95 HOH HOH A . F 6 HOH 96 596 96 HOH HOH A . F 6 HOH 97 597 97 HOH HOH A . F 6 HOH 98 598 98 HOH HOH A . F 6 HOH 99 599 99 HOH HOH A . F 6 HOH 100 600 100 HOH HOH A . F 6 HOH 101 601 101 HOH HOH A . F 6 HOH 102 602 102 HOH HOH A . F 6 HOH 103 603 103 HOH HOH A . F 6 HOH 104 604 104 HOH HOH A . F 6 HOH 105 605 105 HOH HOH A . F 6 HOH 106 606 106 HOH HOH A . F 6 HOH 107 607 107 HOH HOH A . F 6 HOH 108 608 108 HOH HOH A . F 6 HOH 109 609 109 HOH HOH A . F 6 HOH 110 610 110 HOH HOH A . F 6 HOH 111 611 111 HOH HOH A . F 6 HOH 112 612 112 HOH HOH A . F 6 HOH 113 613 113 HOH HOH A . F 6 HOH 114 614 114 HOH HOH A . F 6 HOH 115 615 115 HOH HOH A . F 6 HOH 116 616 116 HOH HOH A . F 6 HOH 117 617 117 HOH HOH A . F 6 HOH 118 618 118 HOH HOH A . F 6 HOH 119 619 119 HOH HOH A . F 6 HOH 120 620 120 HOH HOH A . F 6 HOH 121 621 121 HOH HOH A . F 6 HOH 122 622 122 HOH HOH A . F 6 HOH 123 623 123 HOH HOH A . F 6 HOH 124 624 124 HOH HOH A . F 6 HOH 125 625 125 HOH HOH A . F 6 HOH 126 626 126 HOH HOH A . F 6 HOH 127 627 127 HOH HOH A . F 6 HOH 128 628 128 HOH HOH A . F 6 HOH 129 629 129 HOH HOH A . F 6 HOH 130 630 130 HOH HOH A . F 6 HOH 131 631 131 HOH HOH A . F 6 HOH 132 632 132 HOH HOH A . F 6 HOH 133 633 133 HOH HOH A . F 6 HOH 134 634 134 HOH HOH A . F 6 HOH 135 635 135 HOH HOH A . F 6 HOH 136 636 136 HOH HOH A . F 6 HOH 137 637 137 HOH HOH A . F 6 HOH 138 638 138 HOH HOH A . F 6 HOH 139 639 139 HOH HOH A . F 6 HOH 140 640 140 HOH HOH A . F 6 HOH 141 641 141 HOH HOH A . F 6 HOH 142 642 142 HOH HOH A . F 6 HOH 143 643 143 HOH HOH A . F 6 HOH 144 644 144 HOH HOH A . F 6 HOH 145 645 145 HOH HOH A . F 6 HOH 146 646 146 HOH HOH A . F 6 HOH 147 647 147 HOH HOH A . F 6 HOH 148 648 148 HOH HOH A . F 6 HOH 149 649 149 HOH HOH A . F 6 HOH 150 650 150 HOH HOH A . F 6 HOH 151 651 151 HOH HOH A . F 6 HOH 152 652 152 HOH HOH A . F 6 HOH 153 653 153 HOH HOH A . F 6 HOH 154 654 154 HOH HOH A . F 6 HOH 155 655 155 HOH HOH A . F 6 HOH 156 656 156 HOH HOH A . F 6 HOH 157 657 157 HOH HOH A . F 6 HOH 158 658 158 HOH HOH A . F 6 HOH 159 659 159 HOH HOH A . F 6 HOH 160 660 160 HOH HOH A . F 6 HOH 161 661 161 HOH HOH A . F 6 HOH 162 662 162 HOH HOH A . F 6 HOH 163 663 163 HOH HOH A . F 6 HOH 164 664 164 HOH HOH A . F 6 HOH 165 665 165 HOH HOH A . F 6 HOH 166 666 166 HOH HOH A . F 6 HOH 167 667 167 HOH HOH A . F 6 HOH 168 668 168 HOH HOH A . F 6 HOH 169 669 169 HOH HOH A . F 6 HOH 170 670 170 HOH HOH A . F 6 HOH 171 671 171 HOH HOH A . F 6 HOH 172 672 172 HOH HOH A . F 6 HOH 173 673 173 HOH HOH A . F 6 HOH 174 674 174 HOH HOH A . F 6 HOH 175 675 175 HOH HOH A . F 6 HOH 176 676 176 HOH HOH A . F 6 HOH 177 677 177 HOH HOH A . F 6 HOH 178 678 178 HOH HOH A . F 6 HOH 179 679 179 HOH HOH A . F 6 HOH 180 680 180 HOH HOH A . F 6 HOH 181 681 181 HOH HOH A . F 6 HOH 182 682 182 HOH HOH A . F 6 HOH 183 683 183 HOH HOH A . F 6 HOH 184 684 184 HOH HOH A . F 6 HOH 185 685 185 HOH HOH A . F 6 HOH 186 686 186 HOH HOH A . F 6 HOH 187 687 187 HOH HOH A . F 6 HOH 188 688 188 HOH HOH A . F 6 HOH 189 689 189 HOH HOH A . F 6 HOH 190 690 190 HOH HOH A . F 6 HOH 191 691 191 HOH HOH A . F 6 HOH 192 692 192 HOH HOH A . F 6 HOH 193 693 193 HOH HOH A . F 6 HOH 194 694 194 HOH HOH A . F 6 HOH 195 695 195 HOH HOH A . F 6 HOH 196 696 196 HOH HOH A . F 6 HOH 197 697 197 HOH HOH A . F 6 HOH 198 698 198 HOH HOH A . F 6 HOH 199 699 199 HOH HOH A . F 6 HOH 200 700 200 HOH HOH A . F 6 HOH 201 701 201 HOH HOH A . F 6 HOH 202 702 202 HOH HOH A . F 6 HOH 203 703 203 HOH HOH A . F 6 HOH 204 704 204 HOH HOH A . F 6 HOH 205 705 205 HOH HOH A . F 6 HOH 206 706 206 HOH HOH A . F 6 HOH 207 707 207 HOH HOH A . F 6 HOH 208 708 208 HOH HOH A . F 6 HOH 209 709 209 HOH HOH A . F 6 HOH 210 710 210 HOH HOH A . F 6 HOH 211 711 211 HOH HOH A . F 6 HOH 212 712 212 HOH HOH A . F 6 HOH 213 713 213 HOH HOH A . F 6 HOH 214 714 214 HOH HOH A . F 6 HOH 215 715 215 HOH HOH A . F 6 HOH 216 716 216 HOH HOH A . F 6 HOH 217 717 217 HOH HOH A . F 6 HOH 218 718 218 HOH HOH A . F 6 HOH 219 719 219 HOH HOH A . F 6 HOH 220 720 220 HOH HOH A . F 6 HOH 221 721 221 HOH HOH A . F 6 HOH 222 722 222 HOH HOH A . F 6 HOH 223 723 223 HOH HOH A . F 6 HOH 224 724 224 HOH HOH A . F 6 HOH 225 725 225 HOH HOH A . F 6 HOH 226 726 226 HOH HOH A . F 6 HOH 227 727 227 HOH HOH A . F 6 HOH 228 728 228 HOH HOH A . F 6 HOH 229 729 229 HOH HOH A . F 6 HOH 230 730 230 HOH HOH A . F 6 HOH 231 731 231 HOH HOH A . F 6 HOH 232 732 232 HOH HOH A . F 6 HOH 233 733 233 HOH HOH A . F 6 HOH 234 734 234 HOH HOH A . F 6 HOH 235 735 235 HOH HOH A . F 6 HOH 236 736 236 HOH HOH A . F 6 HOH 237 737 237 HOH HOH A . F 6 HOH 238 738 238 HOH HOH A . F 6 HOH 239 739 239 HOH HOH A . F 6 HOH 240 740 240 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -43.3390 26.9530 11.0550 0.1151 0.1250 -0.0036 0.0346 -0.0132 0.0049 1.5143 0.5696 1.3557 0.2029 0.3555 0.0690 -0.0996 0.0953 0.0043 0.0306 0.1695 0.0117 0.0288 -0.2577 -0.0963 'X-RAY DIFFRACTION' 2 ? refined -50.3470 18.1220 23.6780 0.0865 0.2271 0.0076 0.0361 0.0203 0.0353 8.1473 5.2460 13.3327 -0.1775 0.3126 -4.2060 0.0222 0.2807 -0.3029 -0.3076 -0.1082 0.2780 0.1941 -0.1079 -0.9143 'X-RAY DIFFRACTION' 3 ? refined -36.9570 25.4170 22.0950 0.1200 0.0812 -0.0117 0.0261 -0.0029 -0.0169 1.8434 1.4602 3.7375 1.0354 -1.0954 -1.6172 -0.0789 0.1255 -0.0466 0.0595 0.0125 -0.0131 0.1047 -0.1957 -0.2218 'X-RAY DIFFRACTION' 4 ? refined -27.8570 22.4210 24.7330 0.1558 0.1643 0.0489 -0.0115 -0.0148 0.0061 1.3327 1.3649 1.7578 1.1562 -1.1988 -0.7688 0.0423 -0.0866 0.0442 -0.1542 -0.0706 -0.1063 0.1346 -0.1722 0.1940 'X-RAY DIFFRACTION' 5 ? refined -13.5040 20.8630 27.7200 0.0626 0.1630 0.0631 -0.0476 -0.0151 0.1052 3.4428 1.3061 1.0744 0.3415 -0.4487 0.5159 -0.0008 -0.1107 0.1115 -0.6369 -0.5671 -0.2618 0.1040 0.0859 0.2552 'X-RAY DIFFRACTION' 6 ? refined -31.7010 20.8010 15.8320 0.1460 0.1392 0.0358 0.0032 0.0002 -0.0090 0.7091 0.9279 0.9895 0.5547 -0.0315 -0.0061 -0.0447 0.0329 0.0118 0.0810 -0.0551 -0.0813 -0.0520 -0.0915 0.0728 'X-RAY DIFFRACTION' 7 ? refined -21.5630 13.9790 11.1400 0.0937 0.0453 0.2440 -0.0214 0.0764 -0.0964 3.9182 0.9275 3.2095 -0.3076 0.5862 -0.8933 -0.0362 0.0088 0.0273 0.3374 -0.9702 -0.0540 -0.1329 0.1250 0.1958 'X-RAY DIFFRACTION' 8 ? refined -12.8320 24.2190 16.4230 0.1164 0.1568 0.1142 -0.0399 0.0186 0.0168 2.1069 1.5813 1.5327 0.6033 -0.3815 -0.1553 -0.0625 -0.1282 0.1907 -0.0252 -0.3009 -0.2161 -0.1262 0.0249 0.0600 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 130 A 166 ? A 25 A 61 'X-RAY DIFFRACTION' ? 2 2 A 167 A 174 ? A 62 A 69 'X-RAY DIFFRACTION' ? 3 3 A 175 A 195 ? A 70 A 90 'X-RAY DIFFRACTION' ? 4 4 A 196 A 226 ? A 91 A 121 'X-RAY DIFFRACTION' ? 5 5 A 227 A 250 ? A 122 A 145 'X-RAY DIFFRACTION' ? 6 6 A 251 A 302 ? A 146 A 197 'X-RAY DIFFRACTION' ? 7 7 A 303 A 338 ? A 198 A 233 'X-RAY DIFFRACTION' ? 8 8 A 339 A 371 ? A 234 A 266 'X-RAY DIFFRACTION' ? # _pdbx_phasing_MR.entry_id 3CXM _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 37.660 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 37.660 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 MOLREP . ? other 'A. Vagin' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC refmac_5.4.0066 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 Blu-Ice . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 8 # _pdbx_entry_details.entry_id 3CXM _pdbx_entry_details.sequence_details ;1. THE SEQUENCE OF THIS PROTEIN WAS NOT AVAILABLE AT THE UNIPROT KNOWLEDGEBASE DATABASE (UNIPROTKB) AT THE TIME OF DEPOSITION. 2. THE GENE USED IN THIS STUDY WAS CLONED FROM L. NAIFFI GENOMIC DNA USING PRIMERS DESIGNED FOR RESIDUES 129 TO 373 OF THE AVAILABLE L. BRAZILIENSIS SEQUENCE (UNIPROT ID A4H9F6_LEIBR). ACCORDINGLY, THE NUMBERING OF THE L. NAIFFI PROTEIN USED HERE FOLLOWS THAT OF THE L. BRAZILIENSIS HOMOLOG DESPITE THE LACK OF KNOWLEDGE OF THE FULL-LENGTH L. NAIFFI SEQUENCE. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 135 ? ? -147.20 -26.43 2 1 LYS A 199 ? ? -144.57 -21.54 3 1 GLN A 205 ? ? -95.03 -85.17 4 1 GLN A 213 ? ? -126.01 -65.79 5 1 HIS A 215 ? ? -145.43 29.78 6 1 PHE A 219 ? ? 68.35 -14.69 7 1 MET A 263 ? ? -104.78 78.13 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -22 ? A MET 1 2 1 Y 1 A ALA -21 ? A ALA 2 3 1 Y 1 A HIS -20 ? A HIS 3 4 1 Y 1 A HIS -19 ? A HIS 4 5 1 Y 1 A HIS -18 ? A HIS 5 6 1 Y 1 A HIS -17 ? A HIS 6 7 1 Y 1 A HIS -16 ? A HIS 7 8 1 Y 1 A HIS -15 ? A HIS 8 9 1 Y 1 A MET -14 ? A MET 9 10 1 Y 1 A GLY -13 ? A GLY 10 11 1 Y 1 A THR -12 ? A THR 11 12 1 Y 1 A LEU -11 ? A LEU 12 13 1 Y 1 A GLU -10 ? A GLU 13 14 1 Y 1 A ALA -9 ? A ALA 14 15 1 Y 1 A GLN -8 ? A GLN 15 16 1 Y 1 A THR -7 ? A THR 16 17 1 Y 1 A GLN -6 ? A GLN 17 18 1 Y 1 A GLY -5 ? A GLY 18 19 1 Y 1 A PRO -4 ? A PRO 19 20 1 Y 1 A GLY -3 ? A GLY 20 21 1 Y 1 A SER -2 ? A SER 21 22 1 Y 1 A MET -1 ? A MET 22 23 1 Y 1 A MET 0 ? A MET 23 24 1 Y 1 A SER 129 ? A SER 24 25 1 Y 1 A LEU 372 ? A LEU 267 26 1 Y 1 A HIS 373 ? A HIS 268 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BR BR BR N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 GOL C1 C N N 138 GOL O1 O N N 139 GOL C2 C N N 140 GOL O2 O N N 141 GOL C3 C N N 142 GOL O3 O N N 143 GOL H11 H N N 144 GOL H12 H N N 145 GOL HO1 H N N 146 GOL H2 H N N 147 GOL HO2 H N N 148 GOL H31 H N N 149 GOL H32 H N N 150 GOL HO3 H N N 151 HIS N N N N 152 HIS CA C N S 153 HIS C C N N 154 HIS O O N N 155 HIS CB C N N 156 HIS CG C Y N 157 HIS ND1 N Y N 158 HIS CD2 C Y N 159 HIS CE1 C Y N 160 HIS NE2 N Y N 161 HIS OXT O N N 162 HIS H H N N 163 HIS H2 H N N 164 HIS HA H N N 165 HIS HB2 H N N 166 HIS HB3 H N N 167 HIS HD1 H N N 168 HIS HD2 H N N 169 HIS HE1 H N N 170 HIS HE2 H N N 171 HIS HXT H N N 172 HOH O O N N 173 HOH H1 H N N 174 HOH H2 H N N 175 ILE N N N N 176 ILE CA C N S 177 ILE C C N N 178 ILE O O N N 179 ILE CB C N S 180 ILE CG1 C N N 181 ILE CG2 C N N 182 ILE CD1 C N N 183 ILE OXT O N N 184 ILE H H N N 185 ILE H2 H N N 186 ILE HA H N N 187 ILE HB H N N 188 ILE HG12 H N N 189 ILE HG13 H N N 190 ILE HG21 H N N 191 ILE HG22 H N N 192 ILE HG23 H N N 193 ILE HD11 H N N 194 ILE HD12 H N N 195 ILE HD13 H N N 196 ILE HXT H N N 197 LEU N N N N 198 LEU CA C N S 199 LEU C C N N 200 LEU O O N N 201 LEU CB C N N 202 LEU CG C N N 203 LEU CD1 C N N 204 LEU CD2 C N N 205 LEU OXT O N N 206 LEU H H N N 207 LEU H2 H N N 208 LEU HA H N N 209 LEU HB2 H N N 210 LEU HB3 H N N 211 LEU HG H N N 212 LEU HD11 H N N 213 LEU HD12 H N N 214 LEU HD13 H N N 215 LEU HD21 H N N 216 LEU HD22 H N N 217 LEU HD23 H N N 218 LEU HXT H N N 219 LYS N N N N 220 LYS CA C N S 221 LYS C C N N 222 LYS O O N N 223 LYS CB C N N 224 LYS CG C N N 225 LYS CD C N N 226 LYS CE C N N 227 LYS NZ N N N 228 LYS OXT O N N 229 LYS H H N N 230 LYS H2 H N N 231 LYS HA H N N 232 LYS HB2 H N N 233 LYS HB3 H N N 234 LYS HG2 H N N 235 LYS HG3 H N N 236 LYS HD2 H N N 237 LYS HD3 H N N 238 LYS HE2 H N N 239 LYS HE3 H N N 240 LYS HZ1 H N N 241 LYS HZ2 H N N 242 LYS HZ3 H N N 243 LYS HXT H N N 244 MET N N N N 245 MET CA C N S 246 MET C C N N 247 MET O O N N 248 MET CB C N N 249 MET CG C N N 250 MET SD S N N 251 MET CE C N N 252 MET OXT O N N 253 MET H H N N 254 MET H2 H N N 255 MET HA H N N 256 MET HB2 H N N 257 MET HB3 H N N 258 MET HG2 H N N 259 MET HG3 H N N 260 MET HE1 H N N 261 MET HE2 H N N 262 MET HE3 H N N 263 MET HXT H N N 264 PHE N N N N 265 PHE CA C N S 266 PHE C C N N 267 PHE O O N N 268 PHE CB C N N 269 PHE CG C Y N 270 PHE CD1 C Y N 271 PHE CD2 C Y N 272 PHE CE1 C Y N 273 PHE CE2 C Y N 274 PHE CZ C Y N 275 PHE OXT O N N 276 PHE H H N N 277 PHE H2 H N N 278 PHE HA H N N 279 PHE HB2 H N N 280 PHE HB3 H N N 281 PHE HD1 H N N 282 PHE HD2 H N N 283 PHE HE1 H N N 284 PHE HE2 H N N 285 PHE HZ H N N 286 PHE HXT H N N 287 PRO N N N N 288 PRO CA C N S 289 PRO C C N N 290 PRO O O N N 291 PRO CB C N N 292 PRO CG C N N 293 PRO CD C N N 294 PRO OXT O N N 295 PRO H H N N 296 PRO HA H N N 297 PRO HB2 H N N 298 PRO HB3 H N N 299 PRO HG2 H N N 300 PRO HG3 H N N 301 PRO HD2 H N N 302 PRO HD3 H N N 303 PRO HXT H N N 304 SER N N N N 305 SER CA C N S 306 SER C C N N 307 SER O O N N 308 SER CB C N N 309 SER OG O N N 310 SER OXT O N N 311 SER H H N N 312 SER H2 H N N 313 SER HA H N N 314 SER HB2 H N N 315 SER HB3 H N N 316 SER HG H N N 317 SER HXT H N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TRP N N N N 336 TRP CA C N S 337 TRP C C N N 338 TRP O O N N 339 TRP CB C N N 340 TRP CG C Y N 341 TRP CD1 C Y N 342 TRP CD2 C Y N 343 TRP NE1 N Y N 344 TRP CE2 C Y N 345 TRP CE3 C Y N 346 TRP CZ2 C Y N 347 TRP CZ3 C Y N 348 TRP CH2 C Y N 349 TRP OXT O N N 350 TRP H H N N 351 TRP H2 H N N 352 TRP HA H N N 353 TRP HB2 H N N 354 TRP HB3 H N N 355 TRP HD1 H N N 356 TRP HE1 H N N 357 TRP HE3 H N N 358 TRP HZ2 H N N 359 TRP HZ3 H N N 360 TRP HH2 H N N 361 TRP HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 URA N1 N N N 387 URA C2 C N N 388 URA O2 O N N 389 URA N3 N N N 390 URA C4 C N N 391 URA O4 O N N 392 URA C5 C N N 393 URA C6 C N N 394 URA HN1 H N N 395 URA HN3 H N N 396 URA H5 H N N 397 URA H6 H N N 398 URB O4 O N N 399 URB C4 C N N 400 URB C5 C N N 401 URB BR BR N N 402 URB C6 C N N 403 URB N1 N N N 404 URB C2 C N N 405 URB O2 O N N 406 URB N3 N N N 407 URB H6 H N N 408 URB HN1 H N N 409 URB HN3 H N N 410 VAL N N N N 411 VAL CA C N S 412 VAL C C N N 413 VAL O O N N 414 VAL CB C N N 415 VAL CG1 C N N 416 VAL CG2 C N N 417 VAL OXT O N N 418 VAL H H N N 419 VAL H2 H N N 420 VAL HA H N N 421 VAL HB H N N 422 VAL HG11 H N N 423 VAL HG12 H N N 424 VAL HG13 H N N 425 VAL HG21 H N N 426 VAL HG22 H N N 427 VAL HG23 H N N 428 VAL HXT H N N 429 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 URA N1 C2 sing N N 371 URA N1 C6 sing N N 372 URA N1 HN1 sing N N 373 URA C2 O2 doub N N 374 URA C2 N3 sing N N 375 URA N3 C4 sing N N 376 URA N3 HN3 sing N N 377 URA C4 O4 doub N N 378 URA C4 C5 sing N N 379 URA C5 C6 doub N N 380 URA C5 H5 sing N N 381 URA C6 H6 sing N N 382 URB O4 C4 doub N N 383 URB C4 C5 sing N N 384 URB C4 N3 sing N N 385 URB C5 BR sing N N 386 URB C5 C6 doub N N 387 URB C6 N1 sing N N 388 URB N1 C2 sing N N 389 URB C2 O2 doub N N 390 URB C2 N3 sing N N 391 URB C6 H6 sing N N 392 URB N1 HN1 sing N N 393 URB N3 HN3 sing N N 394 VAL N CA sing N N 395 VAL N H sing N N 396 VAL N H2 sing N N 397 VAL CA C sing N N 398 VAL CA CB sing N N 399 VAL CA HA sing N N 400 VAL C O doub N N 401 VAL C OXT sing N N 402 VAL CB CG1 sing N N 403 VAL CB CG2 sing N N 404 VAL CB HB sing N N 405 VAL CG1 HG11 sing N N 406 VAL CG1 HG12 sing N N 407 VAL CG1 HG13 sing N N 408 VAL CG2 HG21 sing N N 409 VAL CG2 HG22 sing N N 410 VAL CG2 HG23 sing N N 411 VAL OXT HXT sing N N 412 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'BROMIDE ION' BR 3 '5-bromopyrimidine-2,4(1H,3H)-dione' URB 4 URACIL URA 5 GLYCEROL GOL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EUI _pdbx_initial_refinement_model.details 'PDB entry 1EUI' #