HEADER OXIDOREDUCTASE 29-APR-08 3CZM TITLE T. GONDII BRADYZOITE-SPECIFIC LDH (LDH2) IN COMPLEX WITH NAD AND OXQ COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-LACTATE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LDH; COMPND 5 EC: 1.1.1.27; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII; SOURCE 3 ORGANISM_TAXID: 5811; SOURCE 4 GENE: LACTATE DEHYDROGENASE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTYB12 KEYWDS OXIDOREDUCTASE, NAD-BINDING, ROSSMANN FOLD, GLYCOLYSIS, NAD EXPDTA X-RAY DIFFRACTION AUTHOR D.K.WILSON,M.S.SUSKO REVDAT 4 30-AUG-23 3CZM 1 REMARK REVDAT 3 20-OCT-21 3CZM 1 REMARK SEQADV REVDAT 2 11-AUG-10 3CZM 1 REMARK REVDAT 1 02-JUN-09 3CZM 0 JRNL AUTH D.K.WILSON,M.S.SUSKO JRNL TITL T. GONDII BRADYZOITE-SPECIFIC LDH (LDH2) IN COMPLEX WITH NAD JRNL TITL 2 AND OXQ JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 35999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1901 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2332 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4898 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 106 REMARK 3 SOLVENT ATOMS : 279 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.232 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.200 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.610 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5070 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6833 ; 1.872 ; 2.006 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 627 ; 6.609 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 194 ;33.297 ;24.330 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 906 ;16.799 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;17.890 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 800 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3640 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2573 ; 0.291 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3491 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 329 ; 0.198 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 120 ; 0.193 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.078 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3281 ; 1.679 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5087 ; 2.424 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2037 ; 4.262 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1746 ; 5.956 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3CZM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000047405. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35999 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 47.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: 1SOW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 5K, .6M MAGNESIUM ACETATE, .1M REMARK 280 SODIUM ACETATE, PH 5.4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TETRAMER IN SOLUTION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 23970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 75.01000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 13 REMARK 465 THR A 14 REMARK 465 GLY A 15 REMARK 465 GLY A 332 REMARK 465 MET B 13 REMARK 465 THR B 14 REMARK 465 GLY B 332 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 83 13.39 -142.27 REMARK 500 CYS A 131 64.47 -150.48 REMARK 500 LEU A 142 -70.33 -32.28 REMARK 500 ALA A 164 -65.62 -164.71 REMARK 500 TYR A 247 -25.80 -140.35 REMARK 500 ALA A 330 37.59 -73.93 REMARK 500 LEU B 142 -73.79 -33.46 REMARK 500 ALA B 164 -63.50 -170.28 REMARK 500 TYR B 247 -28.92 -144.90 REMARK 500 GLN B 276 58.24 -144.72 REMARK 500 TYR B 279 18.84 59.27 REMARK 500 ALA B 330 25.35 -79.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXQ A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXQ B 706 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SOW RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH NAD AND OXALATE REMARK 900 RELATED ID: 1SOV RELATED DB: PDB REMARK 900 APO FORM OF THE SAME PROTEIN DBREF 3CZM A 13 332 UNP Q27797 LDH_TOXGO 1 326 DBREF 3CZM B 13 332 UNP Q27797 LDH_TOXGO 1 326 SEQADV 3CZM ASN A 209A UNP Q27797 SER 200 ENGINEERED MUTATION SEQADV 3CZM ASN B 209A UNP Q27797 SER 200 ENGINEERED MUTATION SEQRES 1 A 326 MET THR GLY THR VAL SER ARG ARG LYS LYS ILE ALA MET SEQRES 2 A 326 ILE GLY SER GLY MET ILE GLY GLY THR MET GLY TYR LEU SEQRES 3 A 326 CYS VAL LEU ARG GLU LEU ALA ASP VAL VAL LEU PHE ASP SEQRES 4 A 326 VAL VAL THR GLY MET PRO GLU GLY LYS ALA LEU ASP ASP SEQRES 5 A 326 SER GLN ALA THR SER ILE ALA ASP THR ASN VAL SER VAL SEQRES 6 A 326 THR SER ALA ASN GLN TYR GLU LYS ILE ALA GLY SER ASP SEQRES 7 A 326 VAL VAL ILE ILE THR ALA GLY LEU THR LYS VAL PRO GLY SEQRES 8 A 326 LYS SER ASP LYS GLU TRP SER ARG ASN ASP LEU LEU PRO SEQRES 9 A 326 PHE ASN ALA LYS ILE ILE ARG GLU VAL ALA GLN GLY VAL SEQRES 10 A 326 LYS LYS TYR CYS PRO LEU ALA PHE VAL ILE VAL VAL THR SEQRES 11 A 326 ASN PRO LEU ASP CYS MET VAL LYS CYS PHE HIS GLU ALA SEQRES 12 A 326 SER GLY LEU PRO LYS ASN MET VAL CYS GLY MET ALA ASN SEQRES 13 A 326 VAL LEU ASP SER ALA ARG PHE ARG ARG PHE ILE ALA ASP SEQRES 14 A 326 GLN LEU GLU ILE SER PRO ARG ASP ILE GLN ALA THR VAL SEQRES 15 A 326 ILE GLY THR HIS GLY ASP HIS MET LEU PRO LEU ALA ARG SEQRES 16 A 326 TYR VAL THR VAL ASN GLY PHE PRO LEU ARG GLU PHE ILE SEQRES 17 A 326 LYS LYS GLY LYS MET THR GLU ALA LYS LEU ALA GLU ILE SEQRES 18 A 326 VAL GLU ARG THR LYS LYS ALA GLY GLY GLU ILE VAL ARG SEQRES 19 A 326 LEU LEU GLY GLN GLY SER ALA TYR TYR ALA PRO ALA LEU SEQRES 20 A 326 SER ALA ILE THR MET ALA GLN ALA PHE LEU LYS ASP GLU SEQRES 21 A 326 LYS ARG VAL LEU PRO CYS SER VAL TYR CYS GLN GLY GLU SEQRES 22 A 326 TYR GLY LEU HIS ASP MET PHE ILE GLY LEU PRO ALA VAL SEQRES 23 A 326 ILE GLY GLY GLY GLY ILE GLU GLN VAL ILE GLU LEU GLU SEQRES 24 A 326 LEU THR HIS GLU GLU GLN GLU CYS PHE ARG LYS SER VAL SEQRES 25 A 326 ASP ASP VAL VAL GLU LEU ASN LYS SER LEU ALA ALA LEU SEQRES 26 A 326 GLY SEQRES 1 B 326 MET THR GLY THR VAL SER ARG ARG LYS LYS ILE ALA MET SEQRES 2 B 326 ILE GLY SER GLY MET ILE GLY GLY THR MET GLY TYR LEU SEQRES 3 B 326 CYS VAL LEU ARG GLU LEU ALA ASP VAL VAL LEU PHE ASP SEQRES 4 B 326 VAL VAL THR GLY MET PRO GLU GLY LYS ALA LEU ASP ASP SEQRES 5 B 326 SER GLN ALA THR SER ILE ALA ASP THR ASN VAL SER VAL SEQRES 6 B 326 THR SER ALA ASN GLN TYR GLU LYS ILE ALA GLY SER ASP SEQRES 7 B 326 VAL VAL ILE ILE THR ALA GLY LEU THR LYS VAL PRO GLY SEQRES 8 B 326 LYS SER ASP LYS GLU TRP SER ARG ASN ASP LEU LEU PRO SEQRES 9 B 326 PHE ASN ALA LYS ILE ILE ARG GLU VAL ALA GLN GLY VAL SEQRES 10 B 326 LYS LYS TYR CYS PRO LEU ALA PHE VAL ILE VAL VAL THR SEQRES 11 B 326 ASN PRO LEU ASP CYS MET VAL LYS CYS PHE HIS GLU ALA SEQRES 12 B 326 SER GLY LEU PRO LYS ASN MET VAL CYS GLY MET ALA ASN SEQRES 13 B 326 VAL LEU ASP SER ALA ARG PHE ARG ARG PHE ILE ALA ASP SEQRES 14 B 326 GLN LEU GLU ILE SER PRO ARG ASP ILE GLN ALA THR VAL SEQRES 15 B 326 ILE GLY THR HIS GLY ASP HIS MET LEU PRO LEU ALA ARG SEQRES 16 B 326 TYR VAL THR VAL ASN GLY PHE PRO LEU ARG GLU PHE ILE SEQRES 17 B 326 LYS LYS GLY LYS MET THR GLU ALA LYS LEU ALA GLU ILE SEQRES 18 B 326 VAL GLU ARG THR LYS LYS ALA GLY GLY GLU ILE VAL ARG SEQRES 19 B 326 LEU LEU GLY GLN GLY SER ALA TYR TYR ALA PRO ALA LEU SEQRES 20 B 326 SER ALA ILE THR MET ALA GLN ALA PHE LEU LYS ASP GLU SEQRES 21 B 326 LYS ARG VAL LEU PRO CYS SER VAL TYR CYS GLN GLY GLU SEQRES 22 B 326 TYR GLY LEU HIS ASP MET PHE ILE GLY LEU PRO ALA VAL SEQRES 23 B 326 ILE GLY GLY GLY GLY ILE GLU GLN VAL ILE GLU LEU GLU SEQRES 24 B 326 LEU THR HIS GLU GLU GLN GLU CYS PHE ARG LYS SER VAL SEQRES 25 B 326 ASP ASP VAL VAL GLU LEU ASN LYS SER LEU ALA ALA LEU SEQRES 26 B 326 GLY HET NAD A 401 44 HET OXQ A 708 9 HET NAD B 501 44 HET OXQ B 706 9 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM OXQ 4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC ACID FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 OXQ 2(C3 H2 N2 O4) FORMUL 7 HOH *279(H2 O) HELIX 1 1 GLY A 29 GLU A 44 1 15 HELIX 2 2 GLY A 57 ASP A 73B 1 18 HELIX 3 3 GLN A 84 ALA A 89 5 6 HELIX 4 4 SER A 103E TRP A 107 5 5 HELIX 5 5 SER A 108 ASP A 111 5 4 HELIX 6 6 LEU A 112 CYS A 131 1 20 HELIX 7 7 PRO A 141 GLY A 154 1 14 HELIX 8 8 PRO A 156 ASN A 158 5 3 HELIX 9 9 ALA A 164 GLU A 181 1 18 HELIX 10 10 SER A 183 ARG A 185 5 3 HELIX 11 11 ALA A 203 TYR A 205 5 3 HELIX 12 12 LEU A 210A LYS A 215 1 7 HELIX 13 13 THR A 220 GLY A 242C 1 24 HELIX 14 14 TYR A 247 LYS A 263 1 17 HELIX 15 15 GLU A 278 GLY A 280 5 3 HELIX 16 16 THR A 308 ALA A 330 1 24 HELIX 17 17 GLY B 29 GLU B 44 1 15 HELIX 18 18 GLY B 57 ASP B 73B 1 18 HELIX 19 19 GLN B 84 ALA B 89 5 6 HELIX 20 20 SER B 108 ASP B 111 5 4 HELIX 21 21 LEU B 112 CYS B 131 1 20 HELIX 22 22 PRO B 141 GLY B 154 1 14 HELIX 23 23 PRO B 156 ASN B 158 5 3 HELIX 24 24 ALA B 164 GLU B 181 1 18 HELIX 25 25 SER B 183 ARG B 185 5 3 HELIX 26 26 ALA B 203 TYR B 205 5 3 HELIX 27 27 LEU B 210A LYS B 215 1 7 HELIX 28 28 THR B 220 GLY B 242C 1 24 HELIX 29 29 TYR B 247 LYS B 263 1 17 HELIX 30 30 GLU B 278 GLY B 280 5 3 HELIX 31 31 THR B 308 ALA B 330 1 24 SHEET 1 A 8 VAL A 78 ALA A 81 0 SHEET 2 A 8 ASP A 47 PHE A 52 1 N LEU A 51 O THR A 79 SHEET 3 A 8 LYS A 22 ILE A 26 1 N MET A 25 O VAL A 50 SHEET 4 A 8 VAL A 93 ILE A 96 1 O VAL A 93 N ALA A 24 SHEET 5 A 8 PHE A 134 VAL A 137 1 O ILE A 136 N VAL A 94 SHEET 6 A 8 VAL A 160 MET A 163 1 O CYS A 161 N VAL A 137 SHEET 7 A 8 CYS A 271 GLN A 276 -1 O SER A 272 N GLY A 162 SHEET 8 A 8 HIS A 282 LEU A 289 -1 O MET A 285 N CYS A 275 SHEET 1 B 3 ILE A 187 GLN A 188 0 SHEET 2 B 3 THR A 207 VAL A 208 -1 O THR A 207 N GLN A 188 SHEET 3 B 3 PHE A 209C PRO A 209D-1 O PHE A 209C N VAL A 208 SHEET 1 C 2 VAL A 191 ILE A 192 0 SHEET 2 C 2 LEU A 200 PRO A 201 -1 O LEU A 200 N ILE A 192 SHEET 1 D 3 ARG A 267 VAL A 268 0 SHEET 2 D 3 ALA A 291 GLY A 294 -1 O ILE A 293 N ARG A 267 SHEET 3 D 3 GLY A 297 VAL A 302 -1 O GLU A 299 N VAL A 292 SHEET 1 E 6 VAL B 78 ALA B 81 0 SHEET 2 E 6 ASP B 47 PHE B 52 1 N LEU B 51 O THR B 79 SHEET 3 E 6 LYS B 22 ILE B 26 1 N MET B 25 O VAL B 50 SHEET 4 E 6 VAL B 93 ILE B 96 1 O VAL B 93 N ALA B 24 SHEET 5 E 6 PHE B 134 VAL B 137 1 O ILE B 136 N VAL B 94 SHEET 6 E 6 VAL B 160 GLY B 162 1 O CYS B 161 N VAL B 137 SHEET 1 F 3 ILE B 187 GLN B 188 0 SHEET 2 F 3 THR B 207 VAL B 208 -1 O THR B 207 N GLN B 188 SHEET 3 F 3 PHE B 209C PRO B 209D-1 O PHE B 209C N VAL B 208 SHEET 1 G 2 VAL B 191 ILE B 192 0 SHEET 2 G 2 LEU B 200 PRO B 201 -1 O LEU B 200 N ILE B 192 SHEET 1 H 3 ARG B 267 VAL B 268 0 SHEET 2 H 3 ALA B 291 GLY B 294 -1 O ILE B 293 N ARG B 267 SHEET 3 H 3 GLY B 297 VAL B 302 -1 O GLU B 299 N VAL B 292 SHEET 1 I 2 CYS B 271 GLN B 276 0 SHEET 2 I 2 HIS B 282 LEU B 289 -1 O MET B 285 N CYS B 275 CISPEP 1 ASN A 140 PRO A 141 0 -0.22 CISPEP 2 ASN B 140 PRO B 141 0 -0.45 SITE 1 AC1 27 GLY A 29 MET A 30 ILE A 31 ASP A 53 SITE 2 AC1 27 VAL A 54 VAL A 55 MET A 58 THR A 97 SITE 3 AC1 27 ALA A 98 GLY A 99 LEU A 100 THR A 101 SITE 4 AC1 27 ILE A 119 GLU A 122 VAL A 138 ASN A 140 SITE 5 AC1 27 MET A 163 LEU A 167 HIS A 195 ALA A 246 SITE 6 AC1 27 OXQ A 708 HOH A 717 HOH A 722 HOH A 765 SITE 7 AC1 27 HOH A 802 HOH A 817 HOH A 826 SITE 1 AC2 10 TRP A 107 ARG A 109 ASN A 140 ARG A 171 SITE 2 AC2 10 HIS A 195 GLY A 236 SER A 245 NAD A 401 SITE 3 AC2 10 HOH A 740 HOH A 826 SITE 1 AC3 30 GLY B 29 MET B 30 ILE B 31 PHE B 52 SITE 2 AC3 30 ASP B 53 VAL B 54 VAL B 55 MET B 58 SITE 3 AC3 30 THR B 97 ALA B 98 GLY B 99 LEU B 100 SITE 4 AC3 30 THR B 101 ILE B 119 GLU B 122 VAL B 138 SITE 5 AC3 30 ASN B 140 MET B 163 LEU B 167 HIS B 195 SITE 6 AC3 30 ALA B 246 OXQ B 706 HOH B 759 HOH B 760 SITE 7 AC3 30 HOH B 764 HOH B 774 HOH B 857 HOH B 869 SITE 8 AC3 30 HOH B 887 HOH B 890 SITE 1 AC4 11 TRP B 107 ARG B 109 ASN B 140 ARG B 171 SITE 2 AC4 11 HIS B 195 GLY B 236 SER B 245 ALA B 246 SITE 3 AC4 11 NAD B 501 HOH B 760 HOH B 781 CRYST1 140.949 140.949 75.010 90.00 90.00 120.00 P 3 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007095 0.004096 0.000000 0.00000 SCALE2 0.000000 0.008192 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013332 0.00000