data_3D00 # _entry.id 3D00 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3D00 pdb_00003d00 10.2210/pdb3d00/pdb RCSB RCSB047419 ? ? WWPDB D_1000047419 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-10-24 4 'Structure model' 1 3 2017-10-25 5 'Structure model' 1 4 2019-07-24 6 'Structure model' 1 5 2023-02-01 7 'Structure model' 1 6 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Author supporting evidence' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Refinement description' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Derived calculations' 11 7 'Structure model' 'Data collection' 12 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_struct_assembly_auth_evidence 2 4 'Structure model' software 3 5 'Structure model' software 4 5 'Structure model' struct_conn 5 6 'Structure model' database_2 6 6 'Structure model' struct_ref_seq_dif 7 6 'Structure model' struct_site 8 7 'Structure model' chem_comp_atom 9 7 'Structure model' chem_comp_bond 10 7 'Structure model' pdbx_entry_details 11 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_software.classification' 4 5 'Structure model' '_software.contact_author' 5 5 'Structure model' '_software.contact_author_email' 6 5 'Structure model' '_software.language' 7 5 'Structure model' '_software.location' 8 5 'Structure model' '_software.name' 9 5 'Structure model' '_software.type' 10 5 'Structure model' '_software.version' 11 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 6 'Structure model' '_database_2.pdbx_DOI' 13 6 'Structure model' '_database_2.pdbx_database_accession' 14 6 'Structure model' '_struct_ref_seq_dif.details' 15 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 6 'Structure model' '_struct_site.pdbx_auth_seq_id' 18 7 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3D00 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-04-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 383639 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger. ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_volume 66 _citation.page_first 1335 _citation.page_last 1346 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20944230 _citation.pdbx_database_id_DOI 10.1107/S1744309110020166 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Axelrod, H.L.' 1 ? primary 'Das, D.' 2 ? primary 'Abdubek, P.' 3 ? primary 'Astakhova, T.' 4 ? primary 'Bakolitsa, C.' 5 ? primary 'Carlton, D.' 6 ? primary 'Chen, C.' 7 ? primary 'Chiu, H.J.' 8 ? primary 'Clayton, T.' 9 ? primary 'Deller, M.C.' 10 ? primary 'Duan, L.' 11 ? primary 'Ellrott, K.' 12 ? primary 'Farr, C.L.' 13 ? primary 'Feuerhelm, J.' 14 ? primary 'Grant, J.C.' 15 ? primary 'Grzechnik, A.' 16 ? primary 'Han, G.W.' 17 ? primary 'Jaroszewski, L.' 18 ? primary 'Jin, K.K.' 19 ? primary 'Klock, H.E.' 20 ? primary 'Knuth, M.W.' 21 ? primary 'Kozbial, P.' 22 ? primary 'Krishna, S.S.' 23 ? primary 'Kumar, A.' 24 ? primary 'Lam, W.W.' 25 ? primary 'Marciano, D.' 26 ? primary 'McMullan, D.' 27 ? primary 'Miller, M.D.' 28 ? primary 'Morse, A.T.' 29 ? primary 'Nigoghossian, E.' 30 ? primary 'Nopakun, A.' 31 ? primary 'Okach, L.' 32 ? primary 'Puckett, C.' 33 ? primary 'Reyes, R.' 34 ? primary 'Sefcovic, N.' 35 ? primary 'Tien, H.J.' 36 ? primary 'Trame, C.B.' 37 ? primary 'van den Bedem, H.' 38 ? primary 'Weekes, D.' 39 ? primary 'Wooten, T.' 40 ? primary 'Xu, Q.' 41 ? primary 'Hodgson, K.O.' 42 ? primary 'Wooley, J.' 43 ? primary 'Elsliger, M.A.' 44 ? primary 'Deacon, A.M.' 45 ? primary 'Godzik, A.' 46 ? primary 'Lesley, S.A.' 47 ? primary 'Wilson, I.A.' 48 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tungsten formylmethanofuran dehydrogenase subunit E' 21697.605 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 42 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)TARNILSYSYEEYVEKITAFHGYPAPGVLIGGF(MSE)VDLAVKNLPEGILYDAICETRTCLPDAVQLLTPCTF GNGWLTVLP(MSE)GLFAVSLYDKFTGEGVRVFLDVEK(MSE)GPWQEIRNWFLKLKTKKEQDSERLFKEIREAGPDILE LRNVKLKPGFLEKKHKGKIVLCPQCREAYPAQDGELCLSCQGGSPYL ; _entity_poly.pdbx_seq_one_letter_code_can ;GMTARNILSYSYEEYVEKITAFHGYPAPGVLIGGFMVDLAVKNLPEGILYDAICETRTCLPDAVQLLTPCTFGNGWLTVL PMGLFAVSLYDKFTGEGVRVFLDVEKMGPWQEIRNWFLKLKTKKEQDSERLFKEIREAGPDILELRNVKLKPGFLEKKHK GKIVLCPQCREAYPAQDGELCLSCQGGSPYL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 383639 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'CHLORIDE ION' CL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 THR n 1 4 ALA n 1 5 ARG n 1 6 ASN n 1 7 ILE n 1 8 LEU n 1 9 SER n 1 10 TYR n 1 11 SER n 1 12 TYR n 1 13 GLU n 1 14 GLU n 1 15 TYR n 1 16 VAL n 1 17 GLU n 1 18 LYS n 1 19 ILE n 1 20 THR n 1 21 ALA n 1 22 PHE n 1 23 HIS n 1 24 GLY n 1 25 TYR n 1 26 PRO n 1 27 ALA n 1 28 PRO n 1 29 GLY n 1 30 VAL n 1 31 LEU n 1 32 ILE n 1 33 GLY n 1 34 GLY n 1 35 PHE n 1 36 MSE n 1 37 VAL n 1 38 ASP n 1 39 LEU n 1 40 ALA n 1 41 VAL n 1 42 LYS n 1 43 ASN n 1 44 LEU n 1 45 PRO n 1 46 GLU n 1 47 GLY n 1 48 ILE n 1 49 LEU n 1 50 TYR n 1 51 ASP n 1 52 ALA n 1 53 ILE n 1 54 CYS n 1 55 GLU n 1 56 THR n 1 57 ARG n 1 58 THR n 1 59 CYS n 1 60 LEU n 1 61 PRO n 1 62 ASP n 1 63 ALA n 1 64 VAL n 1 65 GLN n 1 66 LEU n 1 67 LEU n 1 68 THR n 1 69 PRO n 1 70 CYS n 1 71 THR n 1 72 PHE n 1 73 GLY n 1 74 ASN n 1 75 GLY n 1 76 TRP n 1 77 LEU n 1 78 THR n 1 79 VAL n 1 80 LEU n 1 81 PRO n 1 82 MSE n 1 83 GLY n 1 84 LEU n 1 85 PHE n 1 86 ALA n 1 87 VAL n 1 88 SER n 1 89 LEU n 1 90 TYR n 1 91 ASP n 1 92 LYS n 1 93 PHE n 1 94 THR n 1 95 GLY n 1 96 GLU n 1 97 GLY n 1 98 VAL n 1 99 ARG n 1 100 VAL n 1 101 PHE n 1 102 LEU n 1 103 ASP n 1 104 VAL n 1 105 GLU n 1 106 LYS n 1 107 MSE n 1 108 GLY n 1 109 PRO n 1 110 TRP n 1 111 GLN n 1 112 GLU n 1 113 ILE n 1 114 ARG n 1 115 ASN n 1 116 TRP n 1 117 PHE n 1 118 LEU n 1 119 LYS n 1 120 LEU n 1 121 LYS n 1 122 THR n 1 123 LYS n 1 124 LYS n 1 125 GLU n 1 126 GLN n 1 127 ASP n 1 128 SER n 1 129 GLU n 1 130 ARG n 1 131 LEU n 1 132 PHE n 1 133 LYS n 1 134 GLU n 1 135 ILE n 1 136 ARG n 1 137 GLU n 1 138 ALA n 1 139 GLY n 1 140 PRO n 1 141 ASP n 1 142 ILE n 1 143 LEU n 1 144 GLU n 1 145 LEU n 1 146 ARG n 1 147 ASN n 1 148 VAL n 1 149 LYS n 1 150 LEU n 1 151 LYS n 1 152 PRO n 1 153 GLY n 1 154 PHE n 1 155 LEU n 1 156 GLU n 1 157 LYS n 1 158 LYS n 1 159 HIS n 1 160 LYS n 1 161 GLY n 1 162 LYS n 1 163 ILE n 1 164 VAL n 1 165 LEU n 1 166 CYS n 1 167 PRO n 1 168 GLN n 1 169 CYS n 1 170 ARG n 1 171 GLU n 1 172 ALA n 1 173 TYR n 1 174 PRO n 1 175 ALA n 1 176 GLN n 1 177 ASP n 1 178 GLY n 1 179 GLU n 1 180 LEU n 1 181 CYS n 1 182 LEU n 1 183 SER n 1 184 CYS n 1 185 GLN n 1 186 GLY n 1 187 GLY n 1 188 SER n 1 189 PRO n 1 190 TYR n 1 191 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YP_460196.1, SYNAS_01490, SYN_00638' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain SB _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Syntrophus aciditrophicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 56780 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 ALA 4 3 3 ALA ALA A . n A 1 5 ARG 5 4 4 ARG ARG A . n A 1 6 ASN 6 5 5 ASN ASN A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 SER 9 8 8 SER SER A . n A 1 10 TYR 10 9 9 TYR TYR A . n A 1 11 SER 11 10 10 SER SER A . n A 1 12 TYR 12 11 11 TYR TYR A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 TYR 15 14 14 TYR TYR A . n A 1 16 VAL 16 15 15 VAL VAL A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 LYS 18 17 17 LYS LYS A . n A 1 19 ILE 19 18 18 ILE ILE A . n A 1 20 THR 20 19 19 THR THR A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 PHE 22 21 21 PHE PHE A . n A 1 23 HIS 23 22 22 HIS HIS A . n A 1 24 GLY 24 23 23 GLY GLY A . n A 1 25 TYR 25 24 24 TYR TYR A . n A 1 26 PRO 26 25 25 PRO PRO A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 PRO 28 27 27 PRO PRO A . n A 1 29 GLY 29 28 28 GLY GLY A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 LEU 31 30 30 LEU LEU A . n A 1 32 ILE 32 31 31 ILE ILE A . n A 1 33 GLY 33 32 32 GLY GLY A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 PHE 35 34 34 PHE PHE A . n A 1 36 MSE 36 35 35 MSE MSE A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 ASP 38 37 37 ASP ASP A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 ALA 40 39 39 ALA ALA A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 LYS 42 41 41 LYS LYS A . n A 1 43 ASN 43 42 42 ASN ASN A . n A 1 44 LEU 44 43 43 LEU LEU A . n A 1 45 PRO 45 44 44 PRO PRO A . n A 1 46 GLU 46 45 45 GLU GLU A . n A 1 47 GLY 47 46 46 GLY GLY A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 TYR 50 49 49 TYR TYR A . n A 1 51 ASP 51 50 50 ASP ASP A . n A 1 52 ALA 52 51 51 ALA ALA A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 CYS 54 53 53 CYS CYS A . n A 1 55 GLU 55 54 54 GLU GLU A . n A 1 56 THR 56 55 55 THR THR A . n A 1 57 ARG 57 56 56 ARG ARG A . n A 1 58 THR 58 57 57 THR THR A . n A 1 59 CYS 59 58 58 CYS CYS A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 PRO 61 60 60 PRO PRO A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 GLN 65 64 64 GLN GLN A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 THR 68 67 67 THR THR A . n A 1 69 PRO 69 68 68 PRO PRO A . n A 1 70 CYS 70 69 69 CYS CYS A . n A 1 71 THR 71 70 70 THR THR A . n A 1 72 PHE 72 71 71 PHE PHE A . n A 1 73 GLY 73 72 72 GLY GLY A . n A 1 74 ASN 74 73 73 ASN ASN A . n A 1 75 GLY 75 74 74 GLY GLY A . n A 1 76 TRP 76 75 75 TRP TRP A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 THR 78 77 77 THR THR A . n A 1 79 VAL 79 78 78 VAL VAL A . n A 1 80 LEU 80 79 79 LEU LEU A . n A 1 81 PRO 81 80 80 PRO PRO A . n A 1 82 MSE 82 81 81 MSE MSE A . n A 1 83 GLY 83 82 82 GLY GLY A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 PHE 85 84 84 PHE PHE A . n A 1 86 ALA 86 85 85 ALA ALA A . n A 1 87 VAL 87 86 86 VAL VAL A . n A 1 88 SER 88 87 87 SER SER A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 TYR 90 89 89 TYR TYR A . n A 1 91 ASP 91 90 90 ASP ASP A . n A 1 92 LYS 92 91 91 LYS LYS A . n A 1 93 PHE 93 92 92 PHE PHE A . n A 1 94 THR 94 93 93 THR THR A . n A 1 95 GLY 95 94 94 GLY GLY A . n A 1 96 GLU 96 95 95 GLU GLU A . n A 1 97 GLY 97 96 96 GLY GLY A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 ARG 99 98 98 ARG ARG A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 PHE 101 100 100 PHE PHE A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 ASP 103 102 102 ASP ASP A . n A 1 104 VAL 104 103 103 VAL VAL A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 LYS 106 105 105 LYS LYS A . n A 1 107 MSE 107 106 106 MSE MSE A . n A 1 108 GLY 108 107 107 GLY GLY A . n A 1 109 PRO 109 108 108 PRO PRO A . n A 1 110 TRP 110 109 109 TRP TRP A . n A 1 111 GLN 111 110 110 GLN GLN A . n A 1 112 GLU 112 111 111 GLU GLU A . n A 1 113 ILE 113 112 112 ILE ILE A . n A 1 114 ARG 114 113 113 ARG ARG A . n A 1 115 ASN 115 114 114 ASN ASN A . n A 1 116 TRP 116 115 115 TRP TRP A . n A 1 117 PHE 117 116 116 PHE PHE A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 LYS 119 118 118 LYS LYS A . n A 1 120 LEU 120 119 119 LEU LEU A . n A 1 121 LYS 121 120 120 LYS LYS A . n A 1 122 THR 122 121 ? ? ? A . n A 1 123 LYS 123 122 ? ? ? A . n A 1 124 LYS 124 123 ? ? ? A . n A 1 125 GLU 125 124 ? ? ? A . n A 1 126 GLN 126 125 ? ? ? A . n A 1 127 ASP 127 126 ? ? ? A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 GLU 129 128 128 GLU GLU A . n A 1 130 ARG 130 129 129 ARG ARG A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 PHE 132 131 131 PHE PHE A . n A 1 133 LYS 133 132 132 LYS LYS A . n A 1 134 GLU 134 133 133 GLU GLU A . n A 1 135 ILE 135 134 134 ILE ILE A . n A 1 136 ARG 136 135 135 ARG ARG A . n A 1 137 GLU 137 136 136 GLU GLU A . n A 1 138 ALA 138 137 137 ALA ALA A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 PRO 140 139 139 PRO PRO A . n A 1 141 ASP 141 140 140 ASP ASP A . n A 1 142 ILE 142 141 141 ILE ILE A . n A 1 143 LEU 143 142 142 LEU LEU A . n A 1 144 GLU 144 143 143 GLU GLU A . n A 1 145 LEU 145 144 144 LEU LEU A . n A 1 146 ARG 146 145 145 ARG ARG A . n A 1 147 ASN 147 146 146 ASN ASN A . n A 1 148 VAL 148 147 147 VAL VAL A . n A 1 149 LYS 149 148 148 LYS LYS A . n A 1 150 LEU 150 149 149 LEU LEU A . n A 1 151 LYS 151 150 150 LYS LYS A . n A 1 152 PRO 152 151 151 PRO PRO A . n A 1 153 GLY 153 152 152 GLY GLY A . n A 1 154 PHE 154 153 153 PHE PHE A . n A 1 155 LEU 155 154 154 LEU LEU A . n A 1 156 GLU 156 155 155 GLU GLU A . n A 1 157 LYS 157 156 156 LYS LYS A . n A 1 158 LYS 158 157 157 LYS LYS A . n A 1 159 HIS 159 158 158 HIS HIS A . n A 1 160 LYS 160 159 159 LYS LYS A . n A 1 161 GLY 161 160 160 GLY GLY A . n A 1 162 LYS 162 161 161 LYS LYS A . n A 1 163 ILE 163 162 162 ILE ILE A . n A 1 164 VAL 164 163 163 VAL VAL A . n A 1 165 LEU 165 164 164 LEU LEU A . n A 1 166 CYS 166 165 165 CYS CYS A . n A 1 167 PRO 167 166 166 PRO PRO A . n A 1 168 GLN 168 167 167 GLN GLN A . n A 1 169 CYS 169 168 168 CYS CYS A . n A 1 170 ARG 170 169 169 ARG ARG A . n A 1 171 GLU 171 170 170 GLU GLU A . n A 1 172 ALA 172 171 171 ALA ALA A . n A 1 173 TYR 173 172 172 TYR TYR A . n A 1 174 PRO 174 173 173 PRO PRO A . n A 1 175 ALA 175 174 174 ALA ALA A . n A 1 176 GLN 176 175 175 GLN GLN A . n A 1 177 ASP 177 176 176 ASP ASP A . n A 1 178 GLY 178 177 177 GLY GLY A . n A 1 179 GLU 179 178 178 GLU GLU A . n A 1 180 LEU 180 179 179 LEU LEU A . n A 1 181 CYS 181 180 180 CYS CYS A . n A 1 182 LEU 182 181 181 LEU LEU A . n A 1 183 SER 183 182 182 SER SER A . n A 1 184 CYS 184 183 183 CYS CYS A . n A 1 185 GLN 185 184 184 GLN GLN A . n A 1 186 GLY 186 185 185 GLY GLY A . n A 1 187 GLY 187 186 186 GLY GLY A . n A 1 188 SER 188 187 187 SER SER A . n A 1 189 PRO 189 188 188 PRO PRO A . n A 1 190 TYR 190 189 189 TYR TYR A . n A 1 191 LEU 191 190 190 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 200 200 ZN ZN A . C 3 CL 1 201 1 CL CL A . D 4 HOH 1 202 2 HOH HOH A . D 4 HOH 2 203 3 HOH HOH A . D 4 HOH 3 204 4 HOH HOH A . D 4 HOH 4 205 5 HOH HOH A . D 4 HOH 5 206 6 HOH HOH A . D 4 HOH 6 207 7 HOH HOH A . D 4 HOH 7 208 8 HOH HOH A . D 4 HOH 8 209 9 HOH HOH A . D 4 HOH 9 210 10 HOH HOH A . D 4 HOH 10 211 11 HOH HOH A . D 4 HOH 11 212 12 HOH HOH A . D 4 HOH 12 213 13 HOH HOH A . D 4 HOH 13 214 14 HOH HOH A . D 4 HOH 14 215 15 HOH HOH A . D 4 HOH 15 216 16 HOH HOH A . D 4 HOH 16 217 17 HOH HOH A . D 4 HOH 17 218 18 HOH HOH A . D 4 HOH 18 219 19 HOH HOH A . D 4 HOH 19 220 20 HOH HOH A . D 4 HOH 20 221 21 HOH HOH A . D 4 HOH 21 222 22 HOH HOH A . D 4 HOH 22 223 23 HOH HOH A . D 4 HOH 23 224 24 HOH HOH A . D 4 HOH 24 225 25 HOH HOH A . D 4 HOH 25 226 26 HOH HOH A . D 4 HOH 26 227 27 HOH HOH A . D 4 HOH 27 228 28 HOH HOH A . D 4 HOH 28 229 29 HOH HOH A . D 4 HOH 29 230 30 HOH HOH A . D 4 HOH 30 231 31 HOH HOH A . D 4 HOH 31 232 32 HOH HOH A . D 4 HOH 32 233 33 HOH HOH A . D 4 HOH 33 234 34 HOH HOH A . D 4 HOH 34 235 35 HOH HOH A . D 4 HOH 35 236 36 HOH HOH A . D 4 HOH 36 237 37 HOH HOH A . D 4 HOH 37 238 38 HOH HOH A . D 4 HOH 38 239 39 HOH HOH A . D 4 HOH 39 240 40 HOH HOH A . D 4 HOH 40 241 41 HOH HOH A . D 4 HOH 41 242 42 HOH HOH A . D 4 HOH 42 243 43 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 16 ? CB ? A GLU 17 CB 2 1 Y 1 A GLU 16 ? CG ? A GLU 17 CG 3 1 Y 1 A GLU 16 ? CD ? A GLU 17 CD 4 1 Y 1 A GLU 16 ? OE1 ? A GLU 17 OE1 5 1 Y 1 A GLU 16 ? OE2 ? A GLU 17 OE2 6 1 Y 1 A LYS 17 ? CD ? A LYS 18 CD 7 1 Y 1 A LYS 17 ? CE ? A LYS 18 CE 8 1 Y 1 A LYS 17 ? NZ ? A LYS 18 NZ 9 1 Y 1 A LEU 48 ? CG ? A LEU 49 CG 10 1 Y 1 A LEU 48 ? CD1 ? A LEU 49 CD1 11 1 Y 1 A LEU 48 ? CD2 ? A LEU 49 CD2 12 1 Y 1 A ARG 56 ? NE ? A ARG 57 NE 13 1 Y 1 A ARG 56 ? CZ ? A ARG 57 CZ 14 1 Y 1 A ARG 56 ? NH1 ? A ARG 57 NH1 15 1 Y 1 A ARG 56 ? NH2 ? A ARG 57 NH2 16 1 Y 1 A GLU 95 ? CD ? A GLU 96 CD 17 1 Y 1 A GLU 95 ? OE1 ? A GLU 96 OE1 18 1 Y 1 A GLU 95 ? OE2 ? A GLU 96 OE2 19 1 Y 1 A LYS 105 ? CD ? A LYS 106 CD 20 1 Y 1 A LYS 105 ? CE ? A LYS 106 CE 21 1 Y 1 A LYS 105 ? NZ ? A LYS 106 NZ 22 1 Y 1 A GLN 110 ? OE1 ? A GLN 111 OE1 23 1 Y 1 A GLN 110 ? NE2 ? A GLN 111 NE2 24 1 Y 1 A LYS 118 ? CE ? A LYS 119 CE 25 1 Y 1 A LYS 118 ? NZ ? A LYS 119 NZ 26 1 Y 1 A LYS 120 ? CE ? A LYS 121 CE 27 1 Y 1 A LYS 120 ? NZ ? A LYS 121 NZ 28 1 Y 1 A GLU 128 ? CG ? A GLU 129 CG 29 1 Y 1 A GLU 128 ? CD ? A GLU 129 CD 30 1 Y 1 A GLU 128 ? OE1 ? A GLU 129 OE1 31 1 Y 1 A GLU 128 ? OE2 ? A GLU 129 OE2 32 1 Y 1 A ARG 129 ? CD ? A ARG 130 CD 33 1 Y 1 A ARG 129 ? NE ? A ARG 130 NE 34 1 Y 1 A ARG 129 ? CZ ? A ARG 130 CZ 35 1 Y 1 A ARG 129 ? NH1 ? A ARG 130 NH1 36 1 Y 1 A ARG 129 ? NH2 ? A ARG 130 NH2 37 1 Y 1 A LYS 132 ? CG ? A LYS 133 CG 38 1 Y 1 A LYS 132 ? CD ? A LYS 133 CD 39 1 Y 1 A LYS 132 ? CE ? A LYS 133 CE 40 1 Y 1 A LYS 132 ? NZ ? A LYS 133 NZ 41 1 Y 1 A GLU 136 ? CG ? A GLU 137 CG 42 1 Y 1 A GLU 136 ? CD ? A GLU 137 CD 43 1 Y 1 A GLU 136 ? OE1 ? A GLU 137 OE1 44 1 Y 1 A GLU 136 ? OE2 ? A GLU 137 OE2 45 1 Y 1 A LYS 148 ? CD ? A LYS 149 CD 46 1 Y 1 A LYS 148 ? CE ? A LYS 149 CE 47 1 Y 1 A LYS 148 ? NZ ? A LYS 149 NZ 48 1 Y 1 A LYS 150 ? NZ ? A LYS 151 NZ 49 1 Y 1 A GLU 155 ? CD ? A GLU 156 CD 50 1 Y 1 A GLU 155 ? OE1 ? A GLU 156 OE1 51 1 Y 1 A GLU 155 ? OE2 ? A GLU 156 OE2 52 1 Y 1 A LYS 156 ? NZ ? A LYS 157 NZ 53 1 Y 1 A LYS 157 ? CG ? A LYS 158 CG 54 1 Y 1 A LYS 157 ? CD ? A LYS 158 CD 55 1 Y 1 A LYS 157 ? CE ? A LYS 158 CE 56 1 Y 1 A LYS 157 ? NZ ? A LYS 158 NZ 57 1 Y 1 A HIS 158 ? CG ? A HIS 159 CG 58 1 Y 1 A HIS 158 ? ND1 ? A HIS 159 ND1 59 1 Y 1 A HIS 158 ? CD2 ? A HIS 159 CD2 60 1 Y 1 A HIS 158 ? CE1 ? A HIS 159 CE1 61 1 Y 1 A HIS 158 ? NE2 ? A HIS 159 NE2 62 1 Y 1 A LYS 159 ? CG ? A LYS 160 CG 63 1 Y 1 A LYS 159 ? CD ? A LYS 160 CD 64 1 Y 1 A LYS 159 ? CE ? A LYS 160 CE 65 1 Y 1 A LYS 159 ? NZ ? A LYS 160 NZ 66 1 Y 1 A LYS 161 ? CE ? A LYS 162 CE 67 1 Y 1 A LYS 161 ? NZ ? A LYS 162 NZ # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 5 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 7 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # _cell.entry_id 3D00 _cell.length_a 54.356 _cell.length_b 54.356 _cell.length_c 136.719 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3D00 _symmetry.Int_Tables_number 92 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3D00 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.01M NiCl2, 20.0% PEG MME 2000, 0.1M Tris-HCl pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2008-04-03 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97817 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97817 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3D00 _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 29.386 _reflns.number_obs 16955 _reflns.pdbx_Rmerge_I_obs 0.078 _reflns.pdbx_netI_over_sigmaI 6.800 _reflns.pdbx_Rsym_value 0.078 _reflns.pdbx_redundancy 7.000 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 30.675 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.90 1.95 ? 8626 ? 0.011 0.7 1.134 ? 7.10 ? 1208 99.90 1 1 1.95 2.00 ? 8582 ? 0.011 0.9 0.855 ? 7.20 ? 1192 99.90 2 1 2.00 2.06 ? 8253 ? 0.011 1.2 0.659 ? 7.10 ? 1157 100.00 3 1 2.06 2.12 ? 8020 ? 0.011 1.6 0.484 ? 7.10 ? 1122 100.00 4 1 2.12 2.19 ? 7887 ? 0.011 1.9 0.410 ? 7.20 ? 1102 100.00 5 1 2.19 2.27 ? 7549 ? 0.011 2.3 0.340 ? 7.10 ? 1068 100.00 6 1 2.27 2.36 ? 7325 ? 0.011 2.8 0.281 ? 7.20 ? 1018 100.00 7 1 2.36 2.45 ? 7032 ? 0.011 3.3 0.235 ? 7.10 ? 989 100.00 8 1 2.45 2.56 ? 6743 ? 0.011 4.2 0.185 ? 7.10 ? 953 100.00 9 1 2.56 2.69 ? 6522 ? 0.011 5.1 0.148 ? 7.10 ? 920 100.00 10 1 2.69 2.83 ? 6142 ? 0.011 6.1 0.122 ? 7.00 ? 872 100.00 11 1 2.83 3.00 ? 5834 ? 0.011 7.3 0.097 ? 7.00 ? 837 100.00 12 1 3.00 3.21 ? 5569 ? 0.011 8.6 0.079 ? 7.00 ? 796 100.00 13 1 3.21 3.47 ? 5024 ? 0.011 10.5 0.062 ? 7.00 ? 718 100.00 14 1 3.47 3.80 ? 4748 ? 0.011 13.2 0.049 ? 6.90 ? 693 100.00 15 1 3.80 4.25 ? 4272 ? 0.011 13.6 0.044 ? 6.80 ? 631 100.00 16 1 4.25 4.91 ? 3748 ? 0.011 14.8 0.041 ? 6.70 ? 561 100.00 17 1 4.91 6.01 ? 3173 ? 0.011 16.0 0.041 ? 6.50 ? 485 100.00 18 1 6.01 8.50 ? 2353 ? 0.011 14.3 0.041 ? 6.00 ? 394 100.00 19 1 8.50 29.386 ? 1244 ? 0.011 16.4 0.035 ? 5.20 ? 239 95.90 20 1 # _refine.entry_id 3D00 _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 29.386 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.900 _refine.ls_number_reflns_obs 16902 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. ZINC WAS MODELED BASED ON X-RAY FLUORESCENCE SCAN AND ANOMALOUS DIFFERENCE FOURIER MAP CALCULATIONS. 5. CHLORIDE WAS MODELED BASED ON CRYSTALLIZATION CONDITIONS. ; _refine.ls_R_factor_obs 0.235 _refine.ls_R_factor_R_work 0.233 _refine.ls_R_factor_R_free 0.268 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 855 _refine.B_iso_mean 35.200 _refine.aniso_B[1][1] 1.730 _refine.aniso_B[2][2] 1.730 _refine.aniso_B[3][3] -3.460 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.938 _refine.pdbx_overall_ESU_R 0.170 _refine.pdbx_overall_ESU_R_Free 0.156 _refine.overall_SU_ML 0.156 _refine.overall_SU_B 11.433 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1388 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 42 _refine_hist.number_atoms_total 1432 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 29.386 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1445 0.019 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 961 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1972 1.604 1.987 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2356 1.031 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 189 6.400 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 53 34.474 23.774 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 225 14.661 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 21.608 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 224 0.088 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1615 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 292 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 285 0.200 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 900 0.196 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 710 0.182 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 747 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 37 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 15 0.114 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 37 0.226 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 15 0.178 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 954 1.214 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 376 0.264 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1489 1.913 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 576 1.086 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 480 1.576 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.750 _refine_ls_shell.number_reflns_R_work 1136 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.347 _refine_ls_shell.R_factor_R_free 0.351 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 64 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1200 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3D00 _struct.title ;Crystal structure of a tungsten formylmethanofuran dehydrogenase subunit e (fmde)-like protein (syn_00638) from syntrophus aciditrophicus at 1.90 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Fwde/gapdh domain-like fold, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, metal binding protein ; _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.entry_id 3D00 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2LQ23_SYNAS _struct_ref.pdbx_db_accession Q2LQ23 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTARNILSYSYEEYVEKITAFHGYPAPGVLIGGFMVDLAVKNLPEGILYDAICETRTCLPDAVQLLTPCTFGNGWLTVLP MGLFAVSLYDKFTGEGVRVFLDVEKMGPWQEIRNWFLKLKTKKEQDSERLFKEIREAGPDILELRNVKLKPGFLEKKHKG KIVLCPQCREAYPAQDGELCLSCQGGSPYL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3D00 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 191 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2LQ23 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 190 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 190 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3D00 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q2LQ23 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4350 ? 1 MORE -59 ? 1 'SSA (A^2)' 17540 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 136.7190000000 # _struct_biol.id 1 _struct_biol.details ;AUTHORS STATE THAT THE PROTOMER MAY FORM A DIMER BASED ON CRYSTAL PACKING ANALYSIS. ANALYTICAL SIZE-EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIC FORM IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 11 ? GLY A 24 ? SER A 10 GLY A 23 1 ? 14 HELX_P HELX_P2 2 ALA A 27 ? ASN A 43 ? ALA A 26 ASN A 42 1 ? 17 HELX_P HELX_P3 3 CYS A 59 ? THR A 68 ? CYS A 58 THR A 67 1 ? 10 HELX_P HELX_P4 4 VAL A 104 ? MSE A 107 ? VAL A 103 MSE A 106 5 ? 4 HELX_P HELX_P5 5 TRP A 110 ? LEU A 118 ? TRP A 109 LEU A 117 1 ? 9 HELX_P HELX_P6 6 SER A 128 ? GLY A 139 ? SER A 127 GLY A 138 1 ? 12 HELX_P HELX_P7 7 LYS A 151 ? GLU A 156 ? LYS A 150 GLU A 155 5 ? 6 HELX_P HELX_P8 8 GLN A 176 ? GLY A 178 ? GLN A 175 GLY A 177 5 ? 3 HELX_P HELX_P9 9 CYS A 181 ? GLY A 186 ? CYS A 180 GLY A 185 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C A ? ? 1_555 A THR 3 N ? ? A MSE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale2 covale both ? A MSE 2 C B ? ? 1_555 A THR 3 N ? ? A MSE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.395 ? ? covale3 covale both ? A PHE 35 C ? ? ? 1_555 A MSE 36 N ? ? A PHE 34 A MSE 35 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale4 covale both ? A MSE 36 C ? ? ? 1_555 A VAL 37 N ? ? A MSE 35 A VAL 36 1_555 ? ? ? ? ? ? ? 1.310 ? ? covale5 covale both ? A PRO 81 C ? ? ? 1_555 A MSE 82 N ? ? A PRO 80 A MSE 81 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? A MSE 82 C ? ? ? 1_555 A GLY 83 N ? ? A MSE 81 A GLY 82 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? A LYS 106 C ? ? ? 1_555 A MSE 107 N ? ? A LYS 105 A MSE 106 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale8 covale both ? A MSE 107 C ? ? ? 1_555 A GLY 108 N ? ? A MSE 106 A GLY 107 1_555 ? ? ? ? ? ? ? 1.329 ? ? metalc1 metalc ? ? A CYS 166 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 165 A ZN 200 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc2 metalc ? ? A CYS 169 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 168 A ZN 200 1_555 ? ? ? ? ? ? ? 2.473 ? ? metalc3 metalc ? ? A CYS 181 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 180 A ZN 200 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc4 metalc ? ? A CYS 184 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 183 A ZN 200 1_555 ? ? ? ? ? ? ? 2.485 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 166 ? A CYS 165 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 169 ? A CYS 168 ? 1_555 110.2 ? 2 SG ? A CYS 166 ? A CYS 165 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 181 ? A CYS 180 ? 1_555 112.1 ? 3 SG ? A CYS 169 ? A CYS 168 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 181 ? A CYS 180 ? 1_555 112.2 ? 4 SG ? A CYS 166 ? A CYS 165 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 184 ? A CYS 183 ? 1_555 107.3 ? 5 SG ? A CYS 169 ? A CYS 168 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 184 ? A CYS 183 ? 1_555 106.5 ? 6 SG ? A CYS 181 ? A CYS 180 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 184 ? A CYS 183 ? 1_555 108.3 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 2 A . . . . MSE A 1 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 2 B . . . . MSE A 1 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 36 ? . . . . MSE A 35 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 82 ? . . . . MSE A 81 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE A 107 ? . . . . MSE A 106 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 77 ? VAL A 79 ? LEU A 76 VAL A 78 A 2 TYR A 50 ? CYS A 54 ? TYR A 49 CYS A 53 A 3 ALA A 86 ? ASP A 91 ? ALA A 85 ASP A 90 A 4 GLU A 96 ? LEU A 102 ? GLU A 95 LEU A 101 A 5 LEU A 143 ? LYS A 149 ? LEU A 142 LYS A 148 B 1 ILE A 163 ? LEU A 165 ? ILE A 162 LEU A 164 B 2 ALA A 172 ? PRO A 174 ? ALA A 171 PRO A 173 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 78 ? O THR A 77 N CYS A 54 ? N CYS A 53 A 2 3 N ILE A 53 ? N ILE A 52 O SER A 88 ? O SER A 87 A 3 4 N ASP A 91 ? N ASP A 90 O GLU A 96 ? O GLU A 95 A 4 5 N GLY A 97 ? N GLY A 96 O VAL A 148 ? O VAL A 147 B 1 2 N VAL A 164 ? N VAL A 163 O TYR A 173 ? O TYR A 172 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 200 ? 4 'BINDING SITE FOR RESIDUE ZN A 200' AC2 Software A CL 201 ? 4 'BINDING SITE FOR RESIDUE CL A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 166 ? CYS A 165 . ? 1_555 ? 2 AC1 4 CYS A 169 ? CYS A 168 . ? 1_555 ? 3 AC1 4 CYS A 181 ? CYS A 180 . ? 1_555 ? 4 AC1 4 CYS A 184 ? CYS A 183 . ? 1_555 ? 5 AC2 4 THR A 56 ? THR A 55 . ? 1_555 ? 6 AC2 4 ARG A 57 ? ARG A 56 . ? 1_555 ? 7 AC2 4 PRO A 81 ? PRO A 80 . ? 1_555 ? 8 AC2 4 GLY A 83 ? GLY A 82 . ? 1_555 ? # _pdbx_entry_details.entry_id 3D00 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 B _pdbx_validate_rmsd_bond.auth_atom_id_2 SE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 B _pdbx_validate_rmsd_bond.bond_value 2.248 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation 0.298 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.034 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 144 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 144 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 144 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 129.59 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation 14.29 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 7 ? ? 43.77 -117.78 2 1 CYS A 58 ? ? 71.58 -54.07 3 1 MSE A 106 ? ? -100.41 64.55 4 1 PRO A 108 ? ? -59.24 -1.83 # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 36 A MSE 35 ? MET SELENOMETHIONINE 3 A MSE 82 A MSE 81 ? MET SELENOMETHIONINE 4 A MSE 107 A MSE 106 ? MET SELENOMETHIONINE # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 16.6441 _pdbx_refine_tls.origin_y 25.3781 _pdbx_refine_tls.origin_z 61.9740 _pdbx_refine_tls.T[1][1] -0.1523 _pdbx_refine_tls.T[2][2] -0.1421 _pdbx_refine_tls.T[3][3] -0.1545 _pdbx_refine_tls.T[1][2] -0.0519 _pdbx_refine_tls.T[1][3] 0.0003 _pdbx_refine_tls.T[2][3] 0.0085 _pdbx_refine_tls.L[1][1] 1.5378 _pdbx_refine_tls.L[2][2] 3.3908 _pdbx_refine_tls.L[3][3] 5.9005 _pdbx_refine_tls.L[1][2] -1.5082 _pdbx_refine_tls.L[1][3] 2.3567 _pdbx_refine_tls.L[2][3] -3.3548 _pdbx_refine_tls.S[1][1] -0.0174 _pdbx_refine_tls.S[2][2] -0.1391 _pdbx_refine_tls.S[3][3] 0.1565 _pdbx_refine_tls.S[1][2] 0.2052 _pdbx_refine_tls.S[1][3] 0.1697 _pdbx_refine_tls.S[2][3] -0.1022 _pdbx_refine_tls.S[2][1] 0.1243 _pdbx_refine_tls.S[3][1] -0.3315 _pdbx_refine_tls.S[3][2] 0.0080 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 2 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 191 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 190 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A THR 121 ? A THR 122 3 1 Y 1 A LYS 122 ? A LYS 123 4 1 Y 1 A LYS 123 ? A LYS 124 5 1 Y 1 A GLU 124 ? A GLU 125 6 1 Y 1 A GLN 125 ? A GLN 126 7 1 Y 1 A ASP 126 ? A ASP 127 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MSE N N N N 231 MSE CA C N S 232 MSE C C N N 233 MSE O O N N 234 MSE OXT O N N 235 MSE CB C N N 236 MSE CG C N N 237 MSE SE SE N N 238 MSE CE C N N 239 MSE H H N N 240 MSE H2 H N N 241 MSE HA H N N 242 MSE HXT H N N 243 MSE HB2 H N N 244 MSE HB3 H N N 245 MSE HG2 H N N 246 MSE HG3 H N N 247 MSE HE1 H N N 248 MSE HE2 H N N 249 MSE HE3 H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 ZN ZN ZN N N 392 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MSE N CA sing N N 218 MSE N H sing N N 219 MSE N H2 sing N N 220 MSE CA C sing N N 221 MSE CA CB sing N N 222 MSE CA HA sing N N 223 MSE C O doub N N 224 MSE C OXT sing N N 225 MSE OXT HXT sing N N 226 MSE CB CG sing N N 227 MSE CB HB2 sing N N 228 MSE CB HB3 sing N N 229 MSE CG SE sing N N 230 MSE CG HG2 sing N N 231 MSE CG HG3 sing N N 232 MSE SE CE sing N N 233 MSE CE HE1 sing N N 234 MSE CE HE2 sing N N 235 MSE CE HE3 sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3D00 _atom_sites.fract_transf_matrix[1][1] 0.018397 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018397 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007314 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S SE ZN # loop_