HEADER HYDROLASE/MEMBRANE PROTEIN 02-MAY-08 3D12 TITLE CRYSTAL STRUCTURES OF NIPAH VIRUS G ATTACHMENT GLYCOPROTEIN IN COMPLEX TITLE 2 WITH ITS RECEPTOR EPHRIN-B3 CAVEAT 3D12 NGA F 2 HAS WRONG CHIRALITY AT ATOM C1 NGA F 2 HAS WRONG CAVEAT 2 3D12 CHIRALITY AT ATOM C2 NGA F 2 HAS WRONG CHIRALITY AT ATOM C3 CAVEAT 3 3D12 NGA F 2 HAS WRONG CHIRALITY AT ATOM C4 NGA F 2 HAS WRONG CAVEAT 4 3D12 CHIRALITY AT ATOM C5 GL0 F 3 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 5 3D12 GLC F 5 HAS WRONG CHIRALITY AT ATOM C1 GLC F 5 HAS WRONG CAVEAT 6 3D12 CHIRALITY AT ATOM C2 GLC F 5 HAS WRONG CHIRALITY AT ATOM C3 CAVEAT 7 3D12 GLC F 5 HAS WRONG CHIRALITY AT ATOM C4 GLC F 5 HAS WRONG CAVEAT 8 3D12 CHIRALITY AT ATOM C5 BGC F 6 HAS WRONG CHIRALITY AT ATOM C5 CAVEAT 9 3D12 GLC F 7 HAS WRONG CHIRALITY AT ATOM C1 GLC F 7 HAS WRONG CAVEAT 10 3D12 CHIRALITY AT ATOM C2 GLC F 7 HAS WRONG CHIRALITY AT ATOM C3 CAVEAT 11 3D12 GLC F 7 HAS WRONG CHIRALITY AT ATOM C4 GLC F 7 HAS WRONG CAVEAT 12 3D12 CHIRALITY AT ATOM C5 NAG G 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 13 3D12 NAG G 2 HAS WRONG CHIRALITY AT ATOM C1 NGZ I 2 HAS WRONG CAVEAT 14 3D12 CHIRALITY AT ATOM C1 GL0 I 3 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 15 3D12 GLC I 5 HAS WRONG CHIRALITY AT ATOM C1 GLC I 5 HAS WRONG CAVEAT 16 3D12 CHIRALITY AT ATOM C2 GLC I 5 HAS WRONG CHIRALITY AT ATOM C3 CAVEAT 17 3D12 GLC I 5 HAS WRONG CHIRALITY AT ATOM C4 GLC I 5 HAS WRONG CAVEAT 18 3D12 CHIRALITY AT ATOM C5 BGC I 6 HAS WRONG CHIRALITY AT ATOM C5 CAVEAT 19 3D12 GXL I 7 HAS WRONG CHIRALITY AT ATOM C4 NAG J 1 HAS WRONG CAVEAT 20 3D12 CHIRALITY AT ATOM C1 NAG J 1 HAS WRONG CHIRALITY AT ATOM C2 CAVEAT 21 3D12 NAG J 2 HAS WRONG CHIRALITY AT ATOM C1 NAG D 1310 HAS WRONG CAVEAT 22 3D12 CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ-NEURAMINIDASE; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: UNP RESIDUES 176-602; COMPND 5 EC: 3.2.1.18; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: EPHRIN-B3; COMPND 9 CHAIN: B, E; COMPND 10 FRAGMENT: UNP RESIDUES 29-169; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NIPAH VIRUS; SOURCE 3 ORGANISM_TAXID: 121791; SOURCE 4 GENE: HN; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HI5; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PACGP67; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 GENE: EFNB3; SOURCE 14 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PACGP67 KEYWDS BETA PROPELLER, PROTEIN-RECEPTOR COMPLEX, ENVELOPE PROTEIN, KEYWDS 2 GLYCOPROTEIN, HEMAGGLUTININ, HYDROLASE, MEMBRANE, SIGNAL-ANCHOR, KEYWDS 3 TRANSMEMBRANE, VIRION, DEVELOPMENTAL PROTEIN, DIFFERENTIATION, KEYWDS 4 NEUROGENESIS, HYDROLASE-MEMBRANE PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.XU,K.R.RAJASHANKAR,Y.P.CHAN,P.HIMANEN,C.C.BRODER,D.B.NIKOLOV REVDAT 8 20-NOV-24 3D12 1 HETSYN REVDAT 7 29-JUL-20 3D12 1 CAVEAT COMPND REMARK SEQADV REVDAT 7 2 1 HETNAM LINK SITE ATOM REVDAT 6 25-OCT-17 3D12 1 REMARK REVDAT 5 12-FEB-14 3D12 1 HETATM SITE LINK REMARK REVDAT 4 13-JUL-11 3D12 1 VERSN REVDAT 3 24-FEB-09 3D12 1 VERSN REVDAT 2 25-NOV-08 3D12 1 JRNL REVDAT 1 19-AUG-08 3D12 0 JRNL AUTH K.XU,K.R.RAJASHANKAR,Y.P.CHAN,J.P.HIMANEN,C.C.BRODER, JRNL AUTH 2 D.B.NIKOLOV JRNL TITL HOST CELL RECOGNITION BY THE HENIPAVIRUSES: CRYSTAL JRNL TITL 2 STRUCTURES OF THE NIPAH G ATTACHMENT GLYCOPROTEIN AND ITS JRNL TITL 3 COMPLEX WITH EPHRIN-B3. JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 9953 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 18632560 JRNL DOI 10.1073/PNAS.0804797105 REMARK 2 REMARK 2 RESOLUTION. 3.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 53799 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3410 - 13.8350 0.91 625 0 0.3210 0.0000 REMARK 3 2 13.8350 - 11.0620 0.93 595 0 0.2240 0.0000 REMARK 3 3 11.0620 - 9.6870 0.94 584 0 0.1870 0.0000 REMARK 3 4 9.6870 - 8.8120 0.94 578 0 0.2090 0.0000 REMARK 3 5 8.8120 - 8.1870 0.94 563 0 0.2070 0.0000 REMARK 3 6 8.1870 - 7.7080 0.94 570 0 0.2130 0.0000 REMARK 3 7 7.7080 - 7.3250 0.90 540 0 0.2190 0.0000 REMARK 3 8 7.3250 - 7.0080 0.93 559 0 0.2420 0.0000 REMARK 3 9 7.0080 - 6.7390 0.93 556 0 0.2300 0.0000 REMARK 3 10 6.7390 - 6.5080 0.93 544 0 0.2360 0.0000 REMARK 3 11 6.5080 - 6.3050 0.93 551 0 0.2180 0.0000 REMARK 3 12 6.3050 - 6.1260 0.93 556 0 0.2040 0.0000 REMARK 3 13 6.1260 - 5.9650 0.92 540 0 0.2020 0.0000 REMARK 3 14 5.9650 - 5.8200 0.92 554 0 0.1980 0.0000 REMARK 3 15 5.8200 - 5.6880 0.92 532 0 0.1860 0.0000 REMARK 3 16 5.6880 - 5.5670 0.91 524 0 0.2190 0.0000 REMARK 3 17 5.5670 - 5.4560 0.93 550 0 0.1820 0.0000 REMARK 3 18 5.4560 - 5.3530 0.92 544 0 0.1860 0.0000 REMARK 3 19 5.3530 - 5.2580 0.92 528 0 0.1740 0.0000 REMARK 3 20 5.2580 - 5.1690 0.93 542 0 0.1860 0.0000 REMARK 3 21 5.1690 - 5.0860 0.91 538 0 0.1670 0.0000 REMARK 3 22 5.0860 - 5.0080 0.91 526 0 0.1690 0.0000 REMARK 3 23 5.0080 - 4.9340 0.92 544 0 0.1640 0.0000 REMARK 3 24 4.9340 - 4.8650 0.91 524 0 0.1700 0.0000 REMARK 3 25 4.8650 - 4.7990 0.91 536 0 0.1600 0.0000 REMARK 3 26 4.7990 - 4.7370 0.91 506 0 0.1620 0.0000 REMARK 3 27 4.7370 - 4.6780 0.91 546 0 0.1850 0.0000 REMARK 3 28 4.6780 - 4.6220 0.91 511 0 0.1530 0.0000 REMARK 3 29 4.6220 - 4.5680 0.91 541 0 0.1740 0.0000 REMARK 3 30 4.5680 - 4.5170 0.92 516 0 0.1620 0.0000 REMARK 3 31 4.5170 - 4.4680 0.91 532 0 0.1580 0.0000 REMARK 3 32 4.4680 - 4.4210 0.92 532 0 0.1720 0.0000 REMARK 3 33 4.4210 - 4.3760 0.91 531 0 0.1780 0.0000 REMARK 3 34 4.3760 - 4.3320 0.92 534 0 0.1690 0.0000 REMARK 3 35 4.3320 - 4.2910 0.89 507 0 0.1690 0.0000 REMARK 3 36 4.2910 - 4.2510 0.91 523 0 0.1770 0.0000 REMARK 3 37 4.2510 - 4.2120 0.91 505 0 0.1660 0.0000 REMARK 3 38 4.2120 - 4.1750 0.90 538 0 0.1820 0.0000 REMARK 3 39 4.1750 - 4.1390 0.90 512 0 0.1930 0.0000 REMARK 3 40 4.1390 - 4.1040 0.88 512 0 0.1760 0.0000 REMARK 3 41 4.1040 - 4.0710 0.89 511 0 0.2040 0.0000 REMARK 3 42 4.0710 - 4.0380 0.89 509 0 0.1940 0.0000 REMARK 3 43 4.0380 - 4.0070 0.88 501 0 0.2030 0.0000 REMARK 3 44 4.0070 - 3.9760 0.89 513 0 0.1880 0.0000 REMARK 3 45 3.9760 - 3.9460 0.89 488 0 0.2210 0.0000 REMARK 3 46 3.9460 - 3.9180 0.90 551 0 0.2050 0.0000 REMARK 3 47 3.9180 - 3.8900 0.88 498 0 0.2120 0.0000 REMARK 3 48 3.8900 - 3.8620 0.88 490 0 0.2200 0.0000 REMARK 3 49 3.8620 - 3.8360 0.88 513 0 0.2130 0.0000 REMARK 3 50 3.8360 - 3.8100 0.87 491 0 0.1990 0.0000 REMARK 3 51 3.8100 - 3.7850 0.88 509 0 0.2110 0.0000 REMARK 3 52 3.7850 - 3.7610 0.88 509 0 0.1930 0.0000 REMARK 3 53 3.7610 - 3.7370 0.90 505 0 0.2060 0.0000 REMARK 3 54 3.7370 - 3.7140 0.87 501 0 0.2080 0.0000 REMARK 3 55 3.7140 - 3.6910 0.89 497 0 0.2110 0.0000 REMARK 3 56 3.6910 - 3.6690 0.88 508 0 0.2260 0.0000 REMARK 3 57 3.6690 - 3.6480 0.88 475 0 0.2080 0.0000 REMARK 3 58 3.6480 - 3.6270 0.85 518 0 0.2230 0.0000 REMARK 3 59 3.6270 - 3.6060 0.89 503 0 0.2360 0.0000 REMARK 3 60 3.6060 - 3.5860 0.84 479 0 0.2300 0.0000 REMARK 3 61 3.5860 - 3.5660 0.88 501 0 0.2380 0.0000 REMARK 3 62 3.5660 - 3.5470 0.86 493 0 0.2570 0.0000 REMARK 3 63 3.5470 - 3.5280 0.87 481 0 0.2490 0.0000 REMARK 3 64 3.5280 - 3.5100 0.87 503 0 0.2500 0.0000 REMARK 3 65 3.5100 - 3.4910 0.84 468 0 0.2580 0.0000 REMARK 3 66 3.4910 - 3.4740 0.86 518 0 0.2440 0.0000 REMARK 3 67 3.4740 - 3.4570 0.85 466 0 0.2530 0.0000 REMARK 3 68 3.4570 - 3.4400 0.84 492 0 0.2610 0.0000 REMARK 3 69 3.4400 - 3.4230 0.84 479 0 0.2840 0.0000 REMARK 3 70 3.4230 - 3.4060 0.86 484 0 0.2720 0.0000 REMARK 3 71 3.4060 - 3.3900 0.83 458 0 0.2570 0.0000 REMARK 3 72 3.3900 - 3.3750 0.86 502 0 0.2630 0.0000 REMARK 3 73 3.3750 - 3.3590 0.83 470 0 0.2550 0.0000 REMARK 3 74 3.3590 - 3.3440 0.84 488 0 0.2830 0.0000 REMARK 3 75 3.3440 - 3.3290 0.88 472 0 0.2800 0.0000 REMARK 3 76 3.3290 - 3.3140 0.84 492 0 0.2780 0.0000 REMARK 3 77 3.3140 - 3.3000 0.83 480 0 0.2820 0.0000 REMARK 3 78 3.3000 - 3.2860 0.84 479 0 0.2670 0.0000 REMARK 3 79 3.2860 - 3.2720 0.81 455 0 0.2680 0.0000 REMARK 3 80 3.2720 - 3.2580 0.83 462 0 0.2940 0.0000 REMARK 3 81 3.2580 - 3.2450 0.82 488 0 0.2730 0.0000 REMARK 3 82 3.2450 - 3.2310 0.85 477 0 0.2750 0.0000 REMARK 3 83 3.2310 - 3.2180 0.84 465 0 0.2690 0.0000 REMARK 3 84 3.2180 - 3.2060 0.83 482 0 0.3060 0.0000 REMARK 3 85 3.2060 - 3.1930 0.80 445 0 0.2860 0.0000 REMARK 3 86 3.1930 - 3.1810 0.81 469 0 0.2910 0.0000 REMARK 3 87 3.1810 - 3.1680 0.76 432 0 0.2830 0.0000 REMARK 3 88 3.1680 - 3.1560 0.81 448 0 0.2840 0.0000 REMARK 3 89 3.1560 - 3.1450 0.82 490 0 0.3010 0.0000 REMARK 3 90 3.1450 - 3.1330 0.83 466 0 0.3070 0.0000 REMARK 3 91 3.1330 - 3.1210 0.80 454 0 0.2800 0.0000 REMARK 3 92 3.1210 - 3.1100 0.77 418 0 0.3160 0.0000 REMARK 3 93 3.1100 - 3.0990 0.78 445 0 0.2800 0.0000 REMARK 3 94 3.0990 - 3.0880 0.77 451 0 0.3180 0.0000 REMARK 3 95 3.0880 - 3.0770 0.82 466 0 0.3030 0.0000 REMARK 3 96 3.0770 - 3.0660 0.77 431 0 0.3080 0.0000 REMARK 3 97 3.0660 - 3.0560 0.77 424 0 0.3060 0.0000 REMARK 3 98 3.0560 - 3.0450 0.78 443 0 0.3270 0.0000 REMARK 3 99 3.0450 - 3.0350 0.76 450 0 0.3380 0.0000 REMARK 3 100 3.0350 - 3.0250 0.74 396 0 0.3300 0.0000 REMARK 3 101 3.0250 - 3.0150 0.75 432 0 0.3260 0.0000 REMARK 3 102 3.0150 - 3.0050 0.53 290 0 0.3310 0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 29.08 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.96200 REMARK 3 B22 (A**2) : 9.96200 REMARK 3 B33 (A**2) : -19.92400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 NULL REMARK 3 ANGLE : 0.927 NULL REMARK 3 CHIRALITY : 0.071 NULL REMARK 3 PLANARITY : 0.003 NULL REMARK 3 DIHEDRAL : 15.366 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3D12 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000047457. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9192 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58204 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.46900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M LI2SO4 AND 100MM TRIS-HCL, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 184.70133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 92.35067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 138.52600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.17533 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 230.87667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 184.70133 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 92.35067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 46.17533 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 138.52600 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 230.87667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -241.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, H, I, J REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 94.74600 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 -164.10489 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -92.35067 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -123.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -98.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 553 O HOH A 48 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 176 CD GLU A 176 OE2 0.081 REMARK 500 GLU D 176 CD GLU D 176 OE2 0.079 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 598 C - N - CA ANGL. DEV. = 10.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 257 99.85 -64.45 REMARK 500 ARG A 258 13.59 -63.17 REMARK 500 GLU A 261 32.35 78.47 REMARK 500 ASN A 287 -72.37 -116.32 REMARK 500 GLU A 289 18.29 58.53 REMARK 500 ASN A 306 40.88 -147.65 REMARK 500 LEU A 337 82.96 75.79 REMARK 500 ARG A 338 -87.40 -64.70 REMARK 500 THR A 385 -39.13 -36.43 REMARK 500 TYR A 389 -6.81 92.24 REMARK 500 ASP A 420 59.50 -105.80 REMARK 500 SER A 432 150.96 -47.28 REMARK 500 ARG A 435 61.86 31.96 REMARK 500 SER A 459 -133.27 -146.66 REMARK 500 VAL A 472 -60.18 -106.92 REMARK 500 GLN A 490 -153.27 -122.86 REMARK 500 PHE A 496 -12.26 90.82 REMARK 500 SER A 528 142.73 -171.19 REMARK 500 ASN A 534 67.47 66.48 REMARK 500 ALA A 552 -147.71 -154.66 REMARK 500 GLN A 559 -104.33 -133.73 REMARK 500 PHE A 566 -169.74 -163.96 REMARK 500 THR A 602 -106.19 -114.81 REMARK 500 TRP B 35 73.15 -101.47 REMARK 500 LYS B 40 -15.87 76.72 REMARK 500 GLN B 43 20.72 -73.76 REMARK 500 GLU B 45 -80.35 -47.63 REMARK 500 TYR B 48 80.00 58.80 REMARK 500 ARG B 64 -77.46 1.44 REMARK 500 ARG B 66 -71.41 -125.81 REMARK 500 PRO B 68 99.78 -65.77 REMARK 500 HIS B 71 -16.59 71.55 REMARK 500 GLU B 85 -0.85 -56.64 REMARK 500 SER B 121 147.22 -171.10 REMARK 500 LEU B 157 -69.33 -90.30 REMARK 500 THR B 158 -80.34 -26.58 REMARK 500 ASN D 186 173.72 -56.50 REMARK 500 TYR D 205 -47.84 -22.84 REMARK 500 THR D 206 2.42 -67.91 REMARK 500 THR D 218 -156.79 -137.84 REMARK 500 ASN D 287 -63.33 -130.71 REMARK 500 SER D 325 63.68 -63.20 REMARK 500 ASN D 326 113.70 70.84 REMARK 500 TYR D 330 -74.26 -64.14 REMARK 500 LEU D 337 87.04 64.55 REMARK 500 THR D 385 -16.74 -46.36 REMARK 500 TYR D 389 -29.85 92.00 REMARK 500 ASP D 420 33.82 -81.76 REMARK 500 ARG D 435 72.75 38.77 REMARK 500 SER D 459 -138.50 -148.57 REMARK 500 REMARK 500 THIS ENTRY HAS 75 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 473 PRO A 474 138.20 REMARK 500 ASN D 473 PRO D 474 140.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE STEREOCHEMISTRIES OF BGC 1466D AND GLC 1465D LIGANDS ARE REMARK 600 AMBIGUOUS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3D11 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURES OF NIPAH VIRUS G ATTACHMENT GLYCOPROTEIN DBREF 3D12 A 176 602 UNP Q9IH62 HN_NIPAV 176 602 DBREF 3D12 B 29 169 UNP O35393 EFNB3_MOUSE 29 169 DBREF 3D12 D 176 602 UNP Q9IH62 HN_NIPAV 176 602 DBREF 3D12 E 29 169 UNP O35393 EFNB3_MOUSE 29 169 SEQADV 3D12 ALA A 603 UNP Q9IH62 EXPRESSION TAG SEQADV 3D12 ALA D 603 UNP Q9IH62 EXPRESSION TAG SEQRES 1 A 428 GLU GLY VAL SER ASN LEU VAL GLY LEU PRO ASN ASN ILE SEQRES 2 A 428 CYS LEU GLN LYS THR SER ASN GLN ILE LEU LYS PRO LYS SEQRES 3 A 428 LEU ILE SER TYR THR LEU PRO VAL VAL GLY GLN SER GLY SEQRES 4 A 428 THR CYS ILE THR ASP PRO LEU LEU ALA MET ASP GLU GLY SEQRES 5 A 428 TYR PHE ALA TYR SER HIS LEU GLU ARG ILE GLY SER CYS SEQRES 6 A 428 SER ARG GLY VAL SER LYS GLN ARG ILE ILE GLY VAL GLY SEQRES 7 A 428 GLU VAL LEU ASP ARG GLY ASP GLU VAL PRO SER LEU PHE SEQRES 8 A 428 MET THR ASN VAL TRP THR PRO PRO ASN PRO ASN THR VAL SEQRES 9 A 428 TYR HIS CYS SER ALA VAL TYR ASN ASN GLU PHE TYR TYR SEQRES 10 A 428 VAL LEU CYS ALA VAL SER THR VAL GLY ASP PRO ILE LEU SEQRES 11 A 428 ASN SER THR TYR TRP SER GLY SER LEU MET MET THR ARG SEQRES 12 A 428 LEU ALA VAL LYS PRO LYS SER ASN GLY GLY GLY TYR ASN SEQRES 13 A 428 GLN HIS GLN LEU ALA LEU ARG SER ILE GLU LYS GLY ARG SEQRES 14 A 428 TYR ASP LYS VAL MET PRO TYR GLY PRO SER GLY ILE LYS SEQRES 15 A 428 GLN GLY ASP THR LEU TYR PHE PRO ALA VAL GLY PHE LEU SEQRES 16 A 428 VAL ARG THR GLU PHE LYS TYR ASN ASP SER ASN CYS PRO SEQRES 17 A 428 ILE THR LYS CYS GLN TYR SER LYS PRO GLU ASN CYS ARG SEQRES 18 A 428 LEU SER MET GLY ILE ARG PRO ASN SER HIS TYR ILE LEU SEQRES 19 A 428 ARG SER GLY LEU LEU LYS TYR ASN LEU SER ASP GLY GLU SEQRES 20 A 428 ASN PRO LYS VAL VAL PHE ILE GLU ILE SER ASP GLN ARG SEQRES 21 A 428 LEU SER ILE GLY SER PRO SER LYS ILE TYR ASP SER LEU SEQRES 22 A 428 GLY GLN PRO VAL PHE TYR GLN ALA SER PHE SER TRP ASP SEQRES 23 A 428 THR MET ILE LYS PHE GLY ASP VAL LEU THR VAL ASN PRO SEQRES 24 A 428 LEU VAL VAL ASN TRP ARG ASN ASN THR VAL ILE SER ARG SEQRES 25 A 428 PRO GLY GLN SER GLN CYS PRO ARG PHE ASN THR CYS PRO SEQRES 26 A 428 GLU ILE CYS TRP GLU GLY VAL TYR ASN ASP ALA PHE LEU SEQRES 27 A 428 ILE ASP ARG ILE ASN TRP ILE SER ALA GLY VAL PHE LEU SEQRES 28 A 428 ASP SER ASN GLN THR ALA GLU ASN PRO VAL PHE THR VAL SEQRES 29 A 428 PHE LYS ASP ASN GLU ILE LEU TYR ARG ALA GLN LEU ALA SEQRES 30 A 428 SER GLU ASP THR ASN ALA GLN LYS THR ILE THR ASN CYS SEQRES 31 A 428 PHE LEU LEU LYS ASN LYS ILE TRP CYS ILE SER LEU VAL SEQRES 32 A 428 GLU ILE TYR ASP THR GLY ASP ASN VAL ILE ARG PRO LYS SEQRES 33 A 428 LEU PHE ALA VAL LYS ILE PRO GLU GLN CYS THR ALA SEQRES 1 B 141 SER LEU GLU PRO VAL TYR TRP ASN SER ALA ASN LYS ARG SEQRES 2 B 141 PHE GLN ALA GLU GLY GLY TYR VAL LEU TYR PRO GLN ILE SEQRES 3 B 141 GLY ASP ARG LEU ASP LEU LEU CYS PRO ARG ALA ARG PRO SEQRES 4 B 141 PRO GLY PRO HIS SER SER PRO SER TYR GLU PHE TYR LYS SEQRES 5 B 141 LEU TYR LEU VAL GLU GLY ALA GLN GLY ARG ARG CYS GLU SEQRES 6 B 141 ALA PRO PRO ALA PRO ASN LEU LEU LEU THR CYS ASP ARG SEQRES 7 B 141 PRO ASP LEU ASP LEU ARG PHE THR ILE LYS PHE GLN GLU SEQRES 8 B 141 TYR SER PRO ASN LEU TRP GLY HIS GLU PHE ARG SER HIS SEQRES 9 B 141 HIS ASP TYR TYR ILE ILE ALA THR SER ASP GLY THR ARG SEQRES 10 B 141 GLU GLY LEU GLU SER LEU GLN GLY GLY VAL CYS LEU THR SEQRES 11 B 141 ARG GLY MET LYS VAL LEU LEU ARG VAL GLY GLN SEQRES 1 D 428 GLU GLY VAL SER ASN LEU VAL GLY LEU PRO ASN ASN ILE SEQRES 2 D 428 CYS LEU GLN LYS THR SER ASN GLN ILE LEU LYS PRO LYS SEQRES 3 D 428 LEU ILE SER TYR THR LEU PRO VAL VAL GLY GLN SER GLY SEQRES 4 D 428 THR CYS ILE THR ASP PRO LEU LEU ALA MET ASP GLU GLY SEQRES 5 D 428 TYR PHE ALA TYR SER HIS LEU GLU ARG ILE GLY SER CYS SEQRES 6 D 428 SER ARG GLY VAL SER LYS GLN ARG ILE ILE GLY VAL GLY SEQRES 7 D 428 GLU VAL LEU ASP ARG GLY ASP GLU VAL PRO SER LEU PHE SEQRES 8 D 428 MET THR ASN VAL TRP THR PRO PRO ASN PRO ASN THR VAL SEQRES 9 D 428 TYR HIS CYS SER ALA VAL TYR ASN ASN GLU PHE TYR TYR SEQRES 10 D 428 VAL LEU CYS ALA VAL SER THR VAL GLY ASP PRO ILE LEU SEQRES 11 D 428 ASN SER THR TYR TRP SER GLY SER LEU MET MET THR ARG SEQRES 12 D 428 LEU ALA VAL LYS PRO LYS SER ASN GLY GLY GLY TYR ASN SEQRES 13 D 428 GLN HIS GLN LEU ALA LEU ARG SER ILE GLU LYS GLY ARG SEQRES 14 D 428 TYR ASP LYS VAL MET PRO TYR GLY PRO SER GLY ILE LYS SEQRES 15 D 428 GLN GLY ASP THR LEU TYR PHE PRO ALA VAL GLY PHE LEU SEQRES 16 D 428 VAL ARG THR GLU PHE LYS TYR ASN ASP SER ASN CYS PRO SEQRES 17 D 428 ILE THR LYS CYS GLN TYR SER LYS PRO GLU ASN CYS ARG SEQRES 18 D 428 LEU SER MET GLY ILE ARG PRO ASN SER HIS TYR ILE LEU SEQRES 19 D 428 ARG SER GLY LEU LEU LYS TYR ASN LEU SER ASP GLY GLU SEQRES 20 D 428 ASN PRO LYS VAL VAL PHE ILE GLU ILE SER ASP GLN ARG SEQRES 21 D 428 LEU SER ILE GLY SER PRO SER LYS ILE TYR ASP SER LEU SEQRES 22 D 428 GLY GLN PRO VAL PHE TYR GLN ALA SER PHE SER TRP ASP SEQRES 23 D 428 THR MET ILE LYS PHE GLY ASP VAL LEU THR VAL ASN PRO SEQRES 24 D 428 LEU VAL VAL ASN TRP ARG ASN ASN THR VAL ILE SER ARG SEQRES 25 D 428 PRO GLY GLN SER GLN CYS PRO ARG PHE ASN THR CYS PRO SEQRES 26 D 428 GLU ILE CYS TRP GLU GLY VAL TYR ASN ASP ALA PHE LEU SEQRES 27 D 428 ILE ASP ARG ILE ASN TRP ILE SER ALA GLY VAL PHE LEU SEQRES 28 D 428 ASP SER ASN GLN THR ALA GLU ASN PRO VAL PHE THR VAL SEQRES 29 D 428 PHE LYS ASP ASN GLU ILE LEU TYR ARG ALA GLN LEU ALA SEQRES 30 D 428 SER GLU ASP THR ASN ALA GLN LYS THR ILE THR ASN CYS SEQRES 31 D 428 PHE LEU LEU LYS ASN LYS ILE TRP CYS ILE SER LEU VAL SEQRES 32 D 428 GLU ILE TYR ASP THR GLY ASP ASN VAL ILE ARG PRO LYS SEQRES 33 D 428 LEU PHE ALA VAL LYS ILE PRO GLU GLN CYS THR ALA SEQRES 1 E 141 SER LEU GLU PRO VAL TYR TRP ASN SER ALA ASN LYS ARG SEQRES 2 E 141 PHE GLN ALA GLU GLY GLY TYR VAL LEU TYR PRO GLN ILE SEQRES 3 E 141 GLY ASP ARG LEU ASP LEU LEU CYS PRO ARG ALA ARG PRO SEQRES 4 E 141 PRO GLY PRO HIS SER SER PRO SER TYR GLU PHE TYR LYS SEQRES 5 E 141 LEU TYR LEU VAL GLU GLY ALA GLN GLY ARG ARG CYS GLU SEQRES 6 E 141 ALA PRO PRO ALA PRO ASN LEU LEU LEU THR CYS ASP ARG SEQRES 7 E 141 PRO ASP LEU ASP LEU ARG PHE THR ILE LYS PHE GLN GLU SEQRES 8 E 141 TYR SER PRO ASN LEU TRP GLY HIS GLU PHE ARG SER HIS SEQRES 9 E 141 HIS ASP TYR TYR ILE ILE ALA THR SER ASP GLY THR ARG SEQRES 10 E 141 GLU GLY LEU GLU SER LEU GLN GLY GLY VAL CYS LEU THR SEQRES 11 E 141 ARG GLY MET LYS VAL LEU LEU ARG VAL GLY GLN MODRES 3D12 ASN A 306 ASN GLYCOSYLATION SITE MODRES 3D12 ASN A 378 ASN GLYCOSYLATION SITE MODRES 3D12 ASN A 481 ASN GLYCOSYLATION SITE MODRES 3D12 ASN D 306 ASN GLYCOSYLATION SITE MODRES 3D12 ASN D 378 ASN GLYCOSYLATION SITE MODRES 3D12 ASN D 481 ASN GLYCOSYLATION SITE MODRES 3D12 ASN D 529 ASN GLYCOSYLATION SITE MODRES 3D12 ASN A 529 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET BMA C 4 11 HET MAN C 5 11 HET LXZ F 1 14 HET NGA F 2 14 HET GL0 F 3 11 HET BGC F 4 11 HET GLC F 5 11 HET BGC F 6 11 HET GLC F 7 11 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET BGC H 4 11 HET MAN H 5 11 HET LXB I 1 14 HET NGZ I 2 14 HET GL0 I 3 11 HET BGC I 4 11 HET GLC I 5 11 HET BGC I 6 11 HET GXL I 7 11 HET NAG J 1 14 HET NAG J 2 14 HET NAG A1210 14 HET SO4 A1368 5 HET SO4 A1369 5 HET SO4 A1370 5 HET SO4 A1371 5 HET SO4 A1372 5 HET SO4 A1373 5 HET SO4 A1374 5 HET SO4 A1375 5 HET SO4 A1376 5 HET SO4 B 202 5 HET SO4 B 203 5 HET NAG D1310 14 HET SO4 D1468 5 HET SO4 D1469 5 HET SO4 D1470 5 HET SO4 D1471 5 HET SO4 D1472 5 HET SO4 D1473 5 HET SO4 D1474 5 HET SO4 D1475 5 HET SO4 D1476 5 HET SO4 D1477 5 HET SO4 E 190 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM LXZ 2-ACETAMIDO-2-DEOXY-ALPHA-D-IDOPYRANOSE HETNAM NGA 2-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE HETNAM GL0 BETA-D-GULOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM LXB 2-ACETAMIDO-2-DEOXY-BETA-D-GULOPYRANOSE HETNAM NGZ 2-ACETAMIDO-2-DEOXY-ALPHA-L-GLUCOPYRANOSE HETNAM GXL ALPHA-L-GALACTOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN LXZ N-ACETYL-ALPHA-D-IDOSAMINE; 2-ACETAMIDO-2-DEOXY-ALPHA- HETSYN 2 LXZ D-IDOSE; 2-ACETAMIDO-2-DEOXY-D-IDOSE; 2-ACETAMIDO-2- HETSYN 3 LXZ DEOXY-IDOSE; 2-(ACETYLAMINO)-2-DEOXY-ALPHA-D- HETSYN 4 LXZ IDOPYRANOSE HETSYN NGA N-ACETYL-BETA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NGA BETA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 NGA ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-D-GALACTOSAMINE HETSYN GL0 BETA-D-GULOSE; D-GULOSE; GULOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN LXB N-ACETYL-BETA-D-GULOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA-D- HETSYN 2 LXB GULOSE; 2-ACETAMIDO-2-DEOXY-D-GULOSE; 2-ACETAMIDO-2- HETSYN 3 LXB DEOXY-GULOSE; 2-(ACETYLAMINO)-2-DEOXY-BETA-D- HETSYN 4 LXB GULOPYRANOSE HETSYN NGZ N-ACETYL-ALPHA-L-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NGZ ALPHA-L-GLUCOSE; 2-ACETAMIDO-2-DEOXY-L-GLUCOSE; 2- HETSYN 3 NGZ ACETAMIDO-2-DEOXY-GLUCOSE; 2-(ACETYLAMINO)-2-DEOXY- HETSYN 4 NGZ ALPHA-L-GLUCOPYRANOSE HETSYN GXL ALPHA-L-GALACTOSE; L-GALACTOSE; GALACTOSE FORMUL 5 NAG 10(C8 H15 N O6) FORMUL 5 BMA 3(C6 H12 O6) FORMUL 5 MAN 2(C6 H12 O6) FORMUL 6 LXZ C8 H15 N O6 FORMUL 6 NGA C8 H15 N O6 FORMUL 6 GL0 2(C6 H12 O6) FORMUL 6 BGC 5(C6 H12 O6) FORMUL 6 GLC 3(C6 H12 O6) FORMUL 9 LXB C8 H15 N O6 FORMUL 9 NGZ C8 H15 N O6 FORMUL 9 GXL C6 H12 O6 FORMUL 12 SO4 22(O4 S 2-) FORMUL 35 HOH *112(H2 O) HELIX 1 1 SER A 204 LEU A 207 5 4 HELIX 2 2 ASN A 306 TRP A 310 5 5 HELIX 3 3 GLY A 327 ASN A 331 1 5 HELIX 4 4 THR A 373 PHE A 375 5 3 HELIX 5 5 ASN A 378 CYS A 382 5 5 HELIX 6 6 GLU A 393 SER A 398 1 6 HELIX 7 7 GLY B 86 ARG B 91 1 6 HELIX 8 8 GLY B 154 ARG B 159 1 6 HELIX 9 9 SER D 204 LEU D 207 5 4 HELIX 10 10 ASN D 306 TRP D 310 5 5 HELIX 11 11 THR D 373 PHE D 375 5 3 HELIX 12 12 ASN D 378 CYS D 382 5 5 HELIX 13 13 GLU D 393 SER D 398 1 6 HELIX 14 14 GLY E 86 ARG E 91 1 6 HELIX 15 15 GLY E 154 ARG E 159 1 6 SHEET 1 A 5 VAL A 178 ASN A 180 0 SHEET 2 A 5 ASN A 557 LEU A 568 -1 O LEU A 567 N SER A 179 SHEET 3 A 5 ILE A 572 TYR A 581 -1 O LEU A 577 N ILE A 562 SHEET 4 A 5 LYS A 591 LYS A 596 -1 O VAL A 595 N CYS A 574 SHEET 5 A 5 LYS A 201 LEU A 202 -1 N LYS A 201 O ALA A 594 SHEET 1 B 4 THR A 215 ASP A 225 0 SHEET 2 B 4 TYR A 228 ILE A 237 -1 O ARG A 236 N CYS A 216 SHEET 3 B 4 VAL A 244 ASP A 257 -1 O LYS A 246 N GLU A 235 SHEET 4 B 4 PRO A 263 TRP A 271 -1 O TRP A 271 N ILE A 250 SHEET 1 C 4 VAL A 279 TYR A 286 0 SHEET 2 C 4 PHE A 290 VAL A 297 -1 O ALA A 296 N TYR A 280 SHEET 3 C 4 LEU A 314 ALA A 320 -1 O THR A 317 N VAL A 293 SHEET 4 C 4 GLN A 332 HIS A 333 -1 O HIS A 333 N ARG A 318 SHEET 1 D 5 ILE A 340 GLU A 341 0 SHEET 2 D 5 VAL A 426 GLU A 430 1 O VAL A 426 N GLU A 341 SHEET 3 D 5 TYR A 407 ASN A 417 -1 N LYS A 415 O VAL A 427 SHEET 4 D 5 THR A 361 VAL A 371 -1 N GLY A 368 O ARG A 410 SHEET 5 D 5 LYS A 347 PRO A 350 -1 N MET A 349 O VAL A 367 SHEET 1 E 5 ILE A 340 GLU A 341 0 SHEET 2 E 5 VAL A 426 GLU A 430 1 O VAL A 426 N GLU A 341 SHEET 3 E 5 TYR A 407 ASN A 417 -1 N LYS A 415 O VAL A 427 SHEET 4 E 5 THR A 361 VAL A 371 -1 N GLY A 368 O ARG A 410 SHEET 5 E 5 ILE A 356 GLN A 358 -1 N ILE A 356 O TYR A 363 SHEET 1 F 4 SER A 442 SER A 447 0 SHEET 2 F 4 GLN A 450 GLN A 455 -1 O VAL A 452 N TYR A 445 SHEET 3 F 4 LYS A 465 THR A 471 -1 O LYS A 465 N GLN A 455 SHEET 4 F 4 VAL A 476 TRP A 479 -1 O ASN A 478 N ASP A 468 SHEET 1 G 4 ALA A 511 ASP A 515 0 SHEET 2 G 4 ILE A 520 LEU A 526 -1 O ALA A 522 N PHE A 512 SHEET 3 G 4 PRO A 535 LYS A 541 -1 O THR A 538 N GLY A 523 SHEET 4 G 4 GLU A 544 GLN A 550 -1 O GLU A 544 N LYS A 541 SHEET 1 H 3 VAL B 33 TYR B 34 0 SHEET 2 H 3 ARG B 57 CYS B 62 1 O ASP B 59 N VAL B 33 SHEET 3 H 3 LEU B 111 LYS B 116 -1 O LEU B 111 N CYS B 62 SHEET 1 I 5 VAL B 49 LEU B 50 0 SHEET 2 I 5 LYS B 162 ARG B 166 1 O LEU B 164 N LEU B 50 SHEET 3 I 5 ASP B 134 ALA B 139 -1 N TYR B 135 O LEU B 165 SHEET 4 I 5 LYS B 80 VAL B 84 -1 N VAL B 84 O TYR B 136 SHEET 5 I 5 ASN B 99 THR B 103 -1 O LEU B 101 N LEU B 81 SHEET 1 J 5 SER D 179 ASN D 180 0 SHEET 2 J 5 ASN D 557 LEU D 568 -1 O LEU D 567 N SER D 179 SHEET 3 J 5 LYS D 571 TYR D 581 -1 O ILE D 575 N ASN D 564 SHEET 4 J 5 ARG D 589 LYS D 596 -1 O VAL D 595 N CYS D 574 SHEET 5 J 5 LYS D 201 LEU D 202 -1 N LYS D 201 O ALA D 594 SHEET 1 K 4 THR D 215 ASP D 225 0 SHEET 2 K 4 TYR D 228 ILE D 237 -1 O ARG D 236 N CYS D 216 SHEET 3 K 4 VAL D 244 ASP D 257 -1 O LYS D 246 N GLU D 235 SHEET 4 K 4 PRO D 263 TRP D 271 -1 O THR D 268 N VAL D 252 SHEET 1 L 4 VAL D 279 TYR D 286 0 SHEET 2 L 4 PHE D 290 VAL D 297 -1 O ALA D 296 N TYR D 280 SHEET 3 L 4 LEU D 314 ALA D 320 -1 O LEU D 319 N TYR D 291 SHEET 4 L 4 GLN D 334 LEU D 335 -1 O LEU D 335 N MET D 316 SHEET 1 M 5 ILE D 340 GLU D 341 0 SHEET 2 M 5 VAL D 426 GLU D 430 1 O PHE D 428 N GLU D 341 SHEET 3 M 5 TYR D 407 ASN D 417 -1 N LEU D 413 O ILE D 429 SHEET 4 M 5 THR D 361 VAL D 371 -1 N ALA D 366 O GLY D 412 SHEET 5 M 5 LYS D 347 PRO D 350 -1 N LYS D 347 O PHE D 369 SHEET 1 N 5 ILE D 340 GLU D 341 0 SHEET 2 N 5 VAL D 426 GLU D 430 1 O PHE D 428 N GLU D 341 SHEET 3 N 5 TYR D 407 ASN D 417 -1 N LEU D 413 O ILE D 429 SHEET 4 N 5 THR D 361 VAL D 371 -1 N ALA D 366 O GLY D 412 SHEET 5 N 5 ILE D 356 GLN D 358 -1 N ILE D 356 O TYR D 363 SHEET 1 O 4 SER D 442 SER D 447 0 SHEET 2 O 4 GLN D 450 GLN D 455 -1 O VAL D 452 N TYR D 445 SHEET 3 O 4 LYS D 465 THR D 471 -1 O VAL D 469 N PRO D 451 SHEET 4 O 4 VAL D 476 VAL D 477 -1 O VAL D 476 N THR D 471 SHEET 1 P 4 ALA D 511 ASP D 515 0 SHEET 2 P 4 ILE D 520 LEU D 526 -1 O ILE D 520 N ILE D 514 SHEET 3 P 4 PRO D 535 LYS D 541 -1 O VAL D 536 N PHE D 525 SHEET 4 P 4 GLU D 544 GLN D 550 -1 O GLU D 544 N LYS D 541 SHEET 1 Q 3 VAL E 33 TYR E 34 0 SHEET 2 Q 3 ARG E 57 CYS E 62 1 O LEU E 61 N VAL E 33 SHEET 3 Q 3 LEU E 111 LYS E 116 -1 O LEU E 111 N CYS E 62 SHEET 1 R 5 VAL E 49 LEU E 50 0 SHEET 2 R 5 LYS E 162 ARG E 166 1 O LEU E 164 N LEU E 50 SHEET 3 R 5 ASP E 134 ALA E 139 -1 N TYR E 135 O LEU E 165 SHEET 4 R 5 LYS E 80 VAL E 84 -1 N VAL E 84 O TYR E 136 SHEET 5 R 5 ASN E 99 THR E 103 -1 O LEU E 101 N LEU E 81 SSBOND 1 CYS A 189 CYS A 601 1555 1555 2.05 SSBOND 2 CYS A 216 CYS A 240 1555 1555 2.05 SSBOND 3 CYS A 282 CYS A 295 1555 1555 2.06 SSBOND 4 CYS A 382 CYS A 395 1555 1555 2.06 SSBOND 5 CYS A 387 CYS A 499 1555 1555 2.06 SSBOND 6 CYS A 493 CYS A 503 1555 1555 2.05 SSBOND 7 CYS A 565 CYS A 574 1555 1555 2.05 SSBOND 8 CYS B 62 CYS B 104 1555 1555 2.04 SSBOND 9 CYS B 92 CYS B 156 1555 1555 2.05 SSBOND 10 CYS D 189 CYS D 601 1555 1555 2.05 SSBOND 11 CYS D 216 CYS D 240 1555 1555 2.05 SSBOND 12 CYS D 282 CYS D 295 1555 1555 2.07 SSBOND 13 CYS D 382 CYS D 395 1555 1555 2.06 SSBOND 14 CYS D 387 CYS D 499 1555 1555 2.06 SSBOND 15 CYS D 493 CYS D 503 1555 1555 2.04 SSBOND 16 CYS D 565 CYS D 574 1555 1555 2.04 SSBOND 17 CYS E 62 CYS E 104 1555 1555 2.05 SSBOND 18 CYS E 92 CYS E 156 1555 1555 2.06 LINK ND2 ASN A 306 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 378 C1 NAG A1210 1555 1555 1.45 LINK ND2 ASN A 481 C1 NAG G 1 1555 1555 1.46 LINK ND2 ASN A 529 C1 LXZ F 1 1555 1555 1.44 LINK ND2 ASN D 306 C1 NAG H 1 1555 1555 1.45 LINK ND2 ASN D 378 C1 NAG D1310 1555 1555 1.45 LINK ND2 ASN D 481 C1 NAG J 1 1555 1555 1.46 LINK ND2 ASN D 529 C1 LXB I 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.46 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.46 LINK O3 BMA C 3 C1 BMA C 4 1555 1555 1.45 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.45 LINK O4 LXZ F 1 C1 NGA F 2 1555 1555 1.47 LINK O3 LXZ F 1 C1 BGC F 6 1555 1555 1.45 LINK O6 LXZ F 1 C1 GLC F 7 1555 1555 1.44 LINK O4 NGA F 2 C1 GL0 F 3 1555 1555 1.48 LINK O3 GL0 F 3 C1 BGC F 4 1555 1555 1.47 LINK O6 GL0 F 3 C1 GLC F 5 1555 1555 1.46 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.46 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.46 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.47 LINK O3 BMA H 3 C1 BGC H 4 1555 1555 1.45 LINK O6 BMA H 3 C1 MAN H 5 1555 1555 1.45 LINK O4 LXB I 1 C1 NGZ I 2 1555 1555 1.47 LINK O3 LXB I 1 C1 BGC I 6 1555 1555 1.45 LINK O6 LXB I 1 C1 GXL I 7 1555 1555 1.44 LINK O4 NGZ I 2 C1 GL0 I 3 1555 1555 1.48 LINK O3 GL0 I 3 C1 BGC I 4 1555 1555 1.46 LINK O6 GL0 I 3 C1 GLC I 5 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.46 CRYST1 189.492 189.492 277.052 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005277 0.003047 0.000000 0.00000 SCALE2 0.000000 0.006094 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003609 0.00000