HEADER TRANSFERASE 06-MAY-08 3D1U OBSLTE 25-NOV-08 3D1U 3F7W TITLE CRYSTAL STRUCTURE OF PUTATIVE FRUCTOSAMINE-3-KINASE TITLE 2 (YP_290396.1) FROM THERMOBIFIDA FUSCA YX-ER1 AT 1.85 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE FRUCTOSAMINE-3-KINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOBIFIDA FUSCA; SOURCE 3 STRAIN: YX; SOURCE 4 GENE: YP_290396.1, TFU_2340; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS YP_290396.1, PUTATIVE FRUCTOSAMINE-3-KINASE, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 2 25-NOV-08 3D1U 1 OBSLTE REVDAT 1 20-MAY-08 3D1U 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE JRNL TITL 2 FRUCTOSAMINE-3-KINASE (YP_290396.1) FROM JRNL TITL 3 THERMOBIFIDA FUSCA YX-ER1 AT 1.85 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0069 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 30072 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1522 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2102 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 ALL ATOMS : 2751 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.67000 REMARK 3 B22 (A**2) : 0.67000 REMARK 3 B33 (A**2) : -1.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.123 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.797 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2490 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1705 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3409 ; 1.595 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4091 ; 1.454 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 318 ; 6.771 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;30.906 ;22.258 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 353 ;13.320 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;18.190 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 356 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2908 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 553 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1540 ; 1.916 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 614 ; 0.534 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2470 ; 2.950 ; 5.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 950 ; 4.896 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 939 ; 6.727 ;11.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 287 REMARK 3 ORIGIN FOR THE GROUP (A): 61.3180 11.2623 7.7478 REMARK 3 T TENSOR REMARK 3 T11: -0.1096 T22: -0.0486 REMARK 3 T33: -0.0722 T12: -0.0007 REMARK 3 T13: -0.0038 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 0.7658 L22: 1.2182 REMARK 3 L33: 1.5046 L12: 0.0488 REMARK 3 L13: 0.0039 L23: -0.0621 REMARK 3 S TENSOR REMARK 3 S11: -0.0053 S12: 0.1148 S13: 0.0153 REMARK 3 S21: -0.0833 S22: 0.0051 S23: 0.0062 REMARK 3 S31: 0.0744 S32: 0.0567 S33: 0.0003 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS REMARK 3 ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 4. CL IONS AND PEG6000 FRAGMENT (PEG) FROM REMARK 3 CRYSTALLIZATION AND ETHYLENE GLYCOL (EDO) FROM CRYO SOLUTION REMARK 3 WERE MODELED. 5. ONE GLYCEROL IS MODELED IN THE ACTIVE SITE REMARK 3 BASED ON ELECTRON DENSITY. REMARK 4 REMARK 4 3D1U COMPLIES WITH FORMAT V. 3.1, 01-AUG-2007 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE RCSB ID CODE IS RCSB047485. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-2008 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL1-5 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918381,0.979224,0.978618 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : 1M LONG RH COATED BENT REMARK 200 CYLINDRICAL MIRROR REMARK 200 FORHORIZONTAL AND VERTICAL REMARK 200 FOCUSSING REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30125 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 28.916 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.68300 REMARK 200 R SYM FOR SHELL (I) : 0.68300 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0000M LICL, 10.0000% PEG-6000, REMARK 280 0.1M BICINE PH 9.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,1/2+Z REMARK 290 3555 1/2-Y,1/2+X,3/4+Z REMARK 290 4555 1/2+Y,1/2-X,1/4+Z REMARK 290 5555 1/2-X,1/2+Y,3/4-Z REMARK 290 6555 1/2+X,1/2-Y,1/4-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,1/2-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.02450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.58900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.58900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.53675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.58900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.58900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.51225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.58900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.58900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.53675 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.58900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.58900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.51225 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.02450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK 300 REMARK: AUTHORS STATE THAT CRYSTAL PACKING ANALYSIS REMARK 300 SUPPORTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT REMARK 300 OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 1 CG1 CG2 REMARK 470 HIS A 24 ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 26 -113.87 46.36 REMARK 500 ASP A 49 -9.61 77.57 REMARK 500 ASP A 54 107.44 -52.36 REMARK 500 ARG A 69 56.56 -97.92 REMARK 500 ASP A 193 49.19 -148.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 2 SER A 3 -145.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 295 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 288 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 289 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 290 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 291 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 292 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 293 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 294 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 295 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 296 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 387095 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3D1U A 2 287 UNP Q47ME9 Q47ME9_THEFY 2 287 SEQADV 3D1U GLY A 0 UNP Q47ME9 LEADER SEQUENCE SEQADV 3D1U VAL A 1 UNP Q47ME9 LEADER SEQUENCE SEQRES 1 A 288 GLY VAL ASN SER VAL ALA ALA ARG VAL THR GLU LEU THR SEQRES 2 A 288 GLY ARG GLU VAL ALA ALA VAL ALA GLU ARG GLY HIS SER SEQRES 3 A 288 HIS ARG TRP HIS LEU TYR ARG VAL GLU LEU ALA ASP GLY SEQRES 4 A 288 THR PRO LEU PHE VAL LYS ALA LEU PRO ASP ASP ALA PRO SEQRES 5 A 288 ALA LEU ASP GLY LEU PHE ARG ALA GLU ALA LEU GLY LEU SEQRES 6 A 288 ASP TRP LEU GLY ARG SER PHE GLY SER PRO VAL PRO GLN SEQRES 7 A 288 VAL ALA GLY TRP ASP ASP ARG THR LEU ALA MSE GLU TRP SEQRES 8 A 288 VAL ASP GLU ARG PRO PRO THR PRO GLU ALA ALA GLU ARG SEQRES 9 A 288 PHE GLY HIS GLN LEU ALA ALA MSE HIS LEU ALA GLY ALA SEQRES 10 A 288 GLU SER PHE GLY ALA THR TRP ASP GLY TYR ILE GLY PRO SEQRES 11 A 288 LEU PRO MSE ASP ASN THR PRO ARG SER THR TRP PRO GLU SEQRES 12 A 288 PHE TYR ALA GLU GLN ARG ILE LEU PRO TYR LEU ARG ARG SEQRES 13 A 288 ALA ALA ASP ARG GLY ALA LEU THR PRO GLY ASP VAL ARG SEQRES 14 A 288 LEU VAL GLU LYS VAL LEU ASP ALA LEU ASP HIS LEU ALA SEQRES 15 A 288 GLY ASP PRO GLU PRO PRO ALA ARG ILE HIS GLY ASP LEU SEQRES 16 A 288 TRP ASN GLY ASN VAL LEU TRP GLN ASP ASP GLY ALA VAL SEQRES 17 A 288 VAL ILE ASP PRO ALA ALA HIS GLY GLY HIS ARG GLU ALA SEQRES 18 A 288 ASP LEU ALA MSE LEU ALA LEU PHE GLY LEU PRO TYR LEU SEQRES 19 A 288 ASP ARG VAL ARG ASP ALA TYR ASN GLU VAL ALA PRO LEU SEQRES 20 A 288 ALA GLU GLY TRP ARG ALA ARG ILE PRO LEU HIS GLN LEU SEQRES 21 A 288 HIS PRO LEU LEU VAL HIS VAL CYS LEU PHE GLY ALA ALA SEQRES 22 A 288 TYR ARG THR THR LEU VAL ASP THR ALA ARG ALA ALA LEU SEQRES 23 A 288 ARG ALA MODRES 3D1U MSE A 88 MET SELENOMETHIONINE MODRES 3D1U MSE A 111 MET SELENOMETHIONINE MODRES 3D1U MSE A 132 MET SELENOMETHIONINE MODRES 3D1U MSE A 224 MET SELENOMETHIONINE HET MSE A 88 8 HET MSE A 111 8 HET MSE A 132 8 HET MSE A 224 8 HET CL A 288 1 HET CL A 289 1 HET EDO A 290 4 HET EDO A 291 4 HET EDO A 292 4 HET EDO A 293 4 HET EDO A 294 4 HET PEG A 295 6 HET GOL A 296 6 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 CL 2(CL 1-) FORMUL 4 EDO 5(C2 H6 O2) FORMUL 9 PEG C4 H10 O3 FORMUL 10 GOL C3 H8 O3 FORMUL 11 HOH *323(H2 O) HELIX 1 1 VAL A 1 GLY A 13 1 13 HELIX 2 2 GLY A 55 GLY A 68 1 14 HELIX 3 3 THR A 97 ALA A 114 1 18 HELIX 4 4 THR A 139 ILE A 149 1 11 HELIX 5 5 ILE A 149 ARG A 159 1 11 HELIX 6 6 THR A 163 ALA A 176 1 14 HELIX 7 7 ALA A 176 ALA A 181 1 6 HELIX 8 8 TRP A 195 GLY A 197 5 3 HELIX 9 9 HIS A 217 GLY A 229 1 13 HELIX 10 10 TYR A 232 ALA A 244 1 13 HELIX 11 11 GLY A 249 GLY A 270 1 22 HELIX 12 12 TYR A 273 ARG A 286 1 14 SHEET 1 A 5 VAL A 16 SER A 25 0 SHEET 2 A 5 TRP A 28 LEU A 35 -1 O GLU A 34 N ALA A 17 SHEET 3 A 5 PRO A 40 ALA A 45 -1 O LEU A 41 N VAL A 33 SHEET 4 A 5 THR A 85 GLU A 89 -1 O MSE A 88 N PHE A 42 SHEET 5 A 5 VAL A 78 ASP A 82 -1 N GLY A 80 O ALA A 87 SHEET 1 B 2 GLY A 125 ILE A 127 0 SHEET 2 B 2 LEU A 130 MSE A 132 -1 O LEU A 130 N ILE A 127 SHEET 1 C 2 ALA A 188 ILE A 190 0 SHEET 2 C 2 HIS A 214 GLY A 216 -1 O GLY A 216 N ALA A 188 SHEET 1 D 2 VAL A 199 GLN A 202 0 SHEET 2 D 2 GLY A 205 VAL A 208 -1 O VAL A 207 N LEU A 200 LINK C ALA A 87 N MSE A 88 1555 1555 1.32 LINK C MSE A 88 N GLU A 89 1555 1555 1.32 LINK C ALA A 110 N MSE A 111 1555 1555 1.32 LINK C MSE A 111 N HIS A 112 1555 1555 1.32 LINK C PRO A 131 N MSE A 132 1555 1555 1.32 LINK C MSE A 132 N ASP A 133 1555 1555 1.33 LINK C ALA A 223 N MSE A 224 1555 1555 1.33 LINK C MSE A 224 N LEU A 225 1555 1555 1.33 SITE 1 AC1 5 ARG A 14 ALA A 36 ASP A 37 HOH A 345 SITE 2 AC1 5 HOH A 561 SITE 1 AC2 2 TYR A 232 ARG A 235 SITE 1 AC3 6 ARG A 14 THR A 39 PHE A 71 GLY A 72 SITE 2 AC3 6 HOH A 368 HOH A 558 SITE 1 AC4 3 TRP A 81 HOH A 326 HOH A 427 SITE 1 AC5 6 TRP A 28 LYS A 44 LEU A 56 GLU A 60 SITE 2 AC5 6 HOH A 309 HOH A 371 SITE 1 AC6 5 PHE A 71 GLN A 77 HOH A 316 HOH A 432 SITE 2 AC6 5 HOH A 544 SITE 1 AC7 9 HIS A 112 GLY A 115 GLU A 185 PRO A 186 SITE 2 AC7 9 PRO A 187 ALA A 188 ARG A 218 HOH A 438 SITE 3 AC7 9 HOH A 589 SITE 1 AC8 4 GLY A 125 ASP A 133 HOH A 467 HOH A 614 SITE 1 AC9 5 PHE A 42 GLU A 89 TRP A 90 LEU A 200 SITE 2 AC9 5 ILE A 209 CRYST1 91.178 91.178 82.049 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010968 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010968 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012188 0.00000