HEADER OXIDOREDUCTASE 08-MAY-08 3D2J TITLE STRUCTURE OF BERBERINE BRIDGE ENZYME FROM ESCHSCHOLZIA CALIFORNICA, TITLE 2 TETRAGONAL CRYSTAL FORM CAVEAT 3D2J MAN B 3 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BERBERINE BRIDGE-FORMING ENZYME; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BBE; TETRAHYDROPROTOBERBERINE SYNTHASE; RETICULINE OXIDASE; COMPND 5 EC: 1.21.3.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHSCHOLZIA CALIFORNICA; SOURCE 3 ORGANISM_COMMON: CALIFORNIA POPPY; SOURCE 4 ORGANISM_TAXID: 3467; SOURCE 5 GENE: BBE1; SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: KM71H; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPICZA KEYWDS BI-COVALENT FLAVINYLATION, N-GLYCOSYLATION, ALAKLOID BIOSYNTHESIS, P- KEYWDS 2 CRESOL METHYLHYDROXYLASE SUPERFAMILY, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.WINKLER,A.LYSKOWSKI,P.MACHEROUX,K.GRUBER REVDAT 4 29-JUL-20 3D2J 1 CAVEAT COMPND REMARK SEQADV REVDAT 4 2 1 HETNAM LINK SITE ATOM REVDAT 3 13-JUL-11 3D2J 1 VERSN REVDAT 2 23-DEC-08 3D2J 1 JRNL VERSN REVDAT 1 28-OCT-08 3D2J 0 JRNL AUTH A.WINKLER,A.LYSKOWSKI,S.RIEDL,M.PUHL,T.M.KUTCHAN, JRNL AUTH 2 P.MACHEROUX,K.GRUBER JRNL TITL A CONCERTED MECHANISM FOR BERBERINE BRIDGE ENZYME JRNL REF NAT.CHEM.BIOL. V. 4 739 2008 JRNL REFN ISSN 1552-4450 JRNL PMID 18953357 JRNL DOI 10.1038/NCHEMBIO.123 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 36664 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1819 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : PHENIX REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 58.28 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.71000 REMARK 3 B22 (A**2) : 0.71000 REMARK 3 B33 (A**2) : -1.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 NULL REMARK 3 ANGLE : 0.731 NULL REMARK 3 CHIRALITY : 0.049 NULL REMARK 3 PLANARITY : 0.003 NULL REMARK 3 DIHEDRAL : 17.870 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3D2J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000047510. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : SIEMENS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36664 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09600 REMARK 200 FOR THE DATA SET : 22.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.67800 REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUMCHLORIDE, 30% PEG-4000, REMARK 280 0.1 M TRIS/HCL, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 123.13900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.26000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.26000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.56950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.26000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.26000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 184.70850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.26000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.26000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.56950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.26000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.26000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 184.70850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 123.13900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1451 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1452 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASN A 3 REMARK 465 LYS A 4 REMARK 465 THR A 5 REMARK 465 PRO A 6 REMARK 465 ILE A 7 REMARK 465 PHE A 8 REMARK 465 PHE A 9 REMARK 465 SER A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 ILE A 13 REMARK 465 PHE A 14 REMARK 465 LEU A 15 REMARK 465 SER A 16 REMARK 465 LEU A 17 REMARK 465 LEU A 18 REMARK 465 ASN A 19 REMARK 465 CYS A 20 REMARK 465 ALA A 21 REMARK 465 GLU A 22 REMARK 465 LEU A 525 REMARK 465 GLU A 526 REMARK 465 LYS A 527 REMARK 465 THR A 528 REMARK 465 LEU A 529 REMARK 465 GLY A 530 REMARK 465 SER A 531 REMARK 465 ASP A 532 REMARK 465 GLY A 533 REMARK 465 GLY A 534 REMARK 465 GLU A 535 REMARK 465 VAL A 536 REMARK 465 VAL A 537 REMARK 465 ILE A 538 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 65 -175.77 -68.93 REMARK 500 SER A 101 -77.03 -105.69 REMARK 500 TYR A 111 18.26 -142.59 REMARK 500 ASP A 286 97.30 -163.98 REMARK 500 GLU A 287 -129.62 56.60 REMARK 500 PHE A 313 59.78 -141.08 REMARK 500 PHE A 351 -73.45 -76.72 REMARK 500 GLU A 353 54.94 -107.64 REMARK 500 PHE A 392 -138.19 -93.53 REMARK 500 ARG A 409 -123.09 -112.31 REMARK 500 HIS A 459 47.93 -105.48 REMARK 500 HIS A 459 44.62 -103.33 REMARK 500 LEU A 491 -124.42 45.36 REMARK 500 ASP A 505 59.28 -145.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 900 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 45 OD1 REMARK 620 2 HOH A1425 O 144.8 REMARK 620 3 HOH A1426 O 74.3 74.6 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3D2D RELATED DB: PDB REMARK 900 STRUCTURE OF BERBERINE BRIDGE ENZYME IN COMPLEX WITH (S)-RETICULINE REMARK 900 RELATED ID: 3D2H RELATED DB: PDB REMARK 900 STRUCTURE OF BERBERINE BRIDGE ENZYME, MONOCLINIC CRYSTAL FORM DBREF 3D2J A 1 538 UNP P30986 RETO_ESCCA 1 538 SEQADV 3D2J GLU A 22 UNP P30986 LEU 22 EXPRESSION TAG SEQADV 3D2J ALA A 23 UNP P30986 GLY 23 EXPRESSION TAG SEQRES 1 A 538 MET GLU ASN LYS THR PRO ILE PHE PHE SER LEU SER ILE SEQRES 2 A 538 PHE LEU SER LEU LEU ASN CYS ALA GLU ALA GLY ASN ASP SEQRES 3 A 538 LEU LEU SER CYS LEU THR PHE ASN GLY VAL ARG ASN HIS SEQRES 4 A 538 THR VAL PHE SER ALA ASP SER ASP SER ASP PHE ASN ARG SEQRES 5 A 538 PHE LEU HIS LEU SER ILE GLN ASN PRO LEU PHE GLN ASN SEQRES 6 A 538 SER LEU ILE SER LYS PRO SER ALA ILE ILE LEU PRO GLY SEQRES 7 A 538 SER LYS GLU GLU LEU SER ASN THR ILE ARG CYS ILE ARG SEQRES 8 A 538 LYS GLY SER TRP THR ILE ARG LEU ARG SER GLY GLY HIS SEQRES 9 A 538 SER TYR GLU GLY LEU SER TYR THR SER ASP THR PRO PHE SEQRES 10 A 538 ILE LEU ILE ASP LEU MET ASN LEU ASN ARG VAL SER ILE SEQRES 11 A 538 ASP LEU GLU SER GLU THR ALA TRP VAL GLU SER GLY SER SEQRES 12 A 538 THR LEU GLY GLU LEU TYR TYR ALA ILE THR GLU SER SER SEQRES 13 A 538 SER LYS LEU GLY PHE THR ALA GLY TRP CYS PRO THR VAL SEQRES 14 A 538 GLY THR GLY GLY HIS ILE SER GLY GLY GLY PHE GLY MET SEQRES 15 A 538 MET SER ARG LYS TYR GLY LEU ALA ALA ASP ASN VAL VAL SEQRES 16 A 538 ASP ALA ILE LEU ILE ASP ALA ASN GLY ALA ILE LEU ASP SEQRES 17 A 538 ARG GLN ALA MET GLY GLU ASP VAL PHE TRP ALA ILE ARG SEQRES 18 A 538 GLY GLY GLY GLY GLY VAL TRP GLY ALA ILE TYR ALA TRP SEQRES 19 A 538 LYS ILE LYS LEU LEU PRO VAL PRO GLU LYS VAL THR VAL SEQRES 20 A 538 PHE ARG VAL THR LYS ASN VAL ALA ILE ASP GLU ALA THR SEQRES 21 A 538 SER LEU LEU HIS LYS TRP GLN PHE VAL ALA GLU GLU LEU SEQRES 22 A 538 GLU GLU ASP PHE THR LEU SER VAL LEU GLY GLY ALA ASP SEQRES 23 A 538 GLU LYS GLN VAL TRP LEU THR MET LEU GLY PHE HIS PHE SEQRES 24 A 538 GLY LEU LYS THR VAL ALA LYS SER THR PHE ASP LEU LEU SEQRES 25 A 538 PHE PRO GLU LEU GLY LEU VAL GLU GLU ASP TYR LEU GLU SEQRES 26 A 538 MET SER TRP GLY GLU SER PHE ALA TYR LEU ALA GLY LEU SEQRES 27 A 538 GLU THR VAL SER GLN LEU ASN ASN ARG PHE LEU LYS PHE SEQRES 28 A 538 ASP GLU ARG ALA PHE LYS THR LYS VAL ASP LEU THR LYS SEQRES 29 A 538 GLU PRO LEU PRO SER LYS ALA PHE TYR GLY LEU LEU GLU SEQRES 30 A 538 ARG LEU SER LYS GLU PRO ASN GLY PHE ILE ALA LEU ASN SEQRES 31 A 538 GLY PHE GLY GLY GLN MET SER LYS ILE SER SER ASP PHE SEQRES 32 A 538 THR PRO PHE PRO HIS ARG SER GLY THR ARG LEU MET VAL SEQRES 33 A 538 GLU TYR ILE VAL ALA TRP ASN GLN SER GLU GLN LYS LYS SEQRES 34 A 538 LYS THR GLU PHE LEU ASP TRP LEU GLU LYS VAL TYR GLU SEQRES 35 A 538 PHE MET LYS PRO PHE VAL SER LYS ASN PRO ARG LEU GLY SEQRES 36 A 538 TYR VAL ASN HIS ILE ASP LEU ASP LEU GLY GLY ILE ASP SEQRES 37 A 538 TRP GLY ASN LYS THR VAL VAL ASN ASN ALA ILE GLU ILE SEQRES 38 A 538 SER ARG SER TRP GLY GLU SER TYR PHE LEU SER ASN TYR SEQRES 39 A 538 GLU ARG LEU ILE ARG ALA LYS THR LEU ILE ASP PRO ASN SEQRES 40 A 538 ASN VAL PHE ASN HIS PRO GLN SER ILE PRO PRO MET ALA SEQRES 41 A 538 ASN PHE ASP TYR LEU GLU LYS THR LEU GLY SER ASP GLY SEQRES 42 A 538 GLY GLU VAL VAL ILE MODRES 3D2J ASN A 38 ASN GLYCOSYLATION SITE MODRES 3D2J ASN A 471 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET MAN B 3 11 HET NAG A 801 14 HET MG A 900 1 HET FAD A 600 53 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM MG MAGNESIUM ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 2 MAN C6 H12 O6 FORMUL 4 MG MG 2+ FORMUL 5 FAD C27 H33 N9 O15 P2 FORMUL 6 HOH *463(H2 O) HELIX 1 1 ALA A 23 ASN A 34 1 12 HELIX 2 2 SER A 48 SER A 57 1 10 HELIX 3 3 ASN A 60 GLN A 64 5 5 HELIX 4 4 SER A 79 GLY A 93 1 15 HELIX 5 5 THR A 144 SER A 156 1 13 HELIX 6 6 GLY A 170 GLY A 177 1 8 HELIX 7 7 MET A 183 GLY A 188 1 6 HELIX 8 8 ALA A 190 ASP A 192 5 3 HELIX 9 9 ASP A 208 GLY A 213 1 6 HELIX 10 10 GLY A 213 ARG A 221 1 9 HELIX 11 11 ALA A 255 LEU A 273 1 19 HELIX 12 12 LEU A 301 PHE A 313 1 13 HELIX 13 13 PRO A 314 GLY A 317 5 4 HELIX 14 14 VAL A 319 TYR A 323 5 5 HELIX 15 15 SER A 327 ALA A 336 1 10 HELIX 16 16 THR A 340 ASN A 346 5 7 HELIX 17 17 PRO A 368 LYS A 381 1 14 HELIX 18 18 GLY A 393 LYS A 398 5 6 HELIX 19 19 ASN A 423 LYS A 428 5 6 HELIX 20 20 LYS A 429 LYS A 445 1 17 HELIX 21 21 PRO A 446 VAL A 448 5 3 HELIX 22 22 TYR A 456 ILE A 460 5 5 HELIX 23 23 ASP A 461 GLY A 465 5 5 HELIX 24 24 ASN A 471 ASN A 477 1 7 HELIX 25 25 ASN A 477 LEU A 491 1 15 HELIX 26 26 ASN A 493 ASP A 505 1 13 SHEET 1 A 4 HIS A 39 VAL A 41 0 SHEET 2 A 4 ALA A 73 ILE A 75 -1 O ILE A 74 N THR A 40 SHEET 3 A 4 PHE A 117 ASP A 121 1 O LEU A 119 N ILE A 75 SHEET 4 A 4 THR A 96 ARG A 100 1 N ARG A 98 O ILE A 120 SHEET 1 B 5 VAL A 128 ASP A 131 0 SHEET 2 B 5 THR A 136 GLU A 140 -1 O TRP A 138 N SER A 129 SHEET 3 B 5 ALA A 230 LYS A 237 -1 O TRP A 234 N VAL A 139 SHEET 4 B 5 VAL A 194 ILE A 200 -1 N ILE A 198 O TYR A 232 SHEET 5 B 5 ILE A 206 LEU A 207 -1 O LEU A 207 N LEU A 199 SHEET 1 C 2 LEU A 159 GLY A 160 0 SHEET 2 C 2 LEU A 239 PRO A 240 -1 O LEU A 239 N GLY A 160 SHEET 1 D 7 LEU A 324 MET A 326 0 SHEET 2 D 7 VAL A 245 VAL A 254 -1 N VAL A 245 O MET A 326 SHEET 3 D 7 GLN A 289 HIS A 298 -1 O MET A 294 N VAL A 250 SHEET 4 D 7 PHE A 277 ASP A 286 -1 N LEU A 282 O THR A 293 SHEET 5 D 7 GLY A 385 GLY A 391 -1 O LEU A 389 N VAL A 281 SHEET 6 D 7 LEU A 414 TRP A 422 -1 O ILE A 419 N PHE A 386 SHEET 7 D 7 ALA A 355 LEU A 362 -1 N ASP A 361 O VAL A 416 SSBOND 1 CYS A 30 CYS A 89 1555 1555 2.03 LINK ND2 ASN A 38 C1 NAG B 1 1555 1555 1.44 LINK ND1 HIS A 104 C8M FAD A 600 1555 1555 1.48 LINK SG CYS A 166 C6 FAD A 600 1555 1555 1.76 LINK ND2 ASN A 471 C1 NAG A 801 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O4 NAG B 2 C1 MAN B 3 1555 1555 1.44 LINK OD1 ASP A 45 MG MG A 900 1555 1555 2.49 LINK MG MG A 900 O HOH A1425 1555 1555 2.18 LINK MG MG A 900 O HOH A1426 1555 1555 2.47 CISPEP 1 ASN A 451 PRO A 452 0 -1.56 CRYST1 68.520 68.520 246.278 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014594 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004060 0.00000