HEADER HYDROLASE 19-MAY-08 3D6E TITLE CRYSTAL STRUCTURE OF THE ENGINEERED 1,3-1,4-BETA-GLUCANASE PROTEIN TITLE 2 FROM BACILLUS LICHENIFORMIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCANASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ENDO-BETA-1,3-1,4 GLUCANASE, 1,3-1,4-BETA-D-GLUCAN 4- COMPND 5 GLUCANOHYDROLASE, LICHENASE; COMPND 6 EC: 3.2.1.73; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS LICHENIFORMIS; SOURCE 3 ORGANISM_TAXID: 1402; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 STAR; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET16B KEYWDS BETA-GLUCAN HYDROLYSIS, CALCIUM BINDING MOTIF, PROTEIN ENGINEERING, KEYWDS 2 GLYCOSIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR I.FITA,A.PLANAS,B.M.CALISTO,T.ADDINGTON REVDAT 4 01-NOV-23 3D6E 1 REMARK SEQADV LINK REVDAT 3 23-FEB-11 3D6E 1 JRNL REVDAT 2 08-DEC-10 3D6E 1 JRNL REVDAT 1 19-MAY-09 3D6E 0 JRNL AUTH T.ADDINGTON,B.CALISTO,M.ALFONSO-PRIETO,C.ROVIRA,I.FITA, JRNL AUTH 2 A.PLANAS JRNL TITL RE-ENGINEERING SPECIFICITY IN 1,3-1,4-BETA-GLUCANASE TO JRNL TITL 2 ACCEPT BRANCHED XYLOGLUCAN SUBSTRATES JRNL REF PROTEINS V. 79 365 2011 JRNL REFN ISSN 0887-3585 JRNL PMID 21069723 JRNL DOI 10.1002/PROT.22884 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.HAHN,J.PONS,A.PLANAS,E.QUEROL,U.HEINEMANN REMARK 1 TITL CRYSTAL STRUCTURE OF BACILLUS LICHENIFORMIS REMARK 1 TITL 2 1,3-1,4-BETA-D-GLUCAN 4-GLUCANOHYDROLASE AT 1.8 A RESOLUTION REMARK 1 REF FEBS LETT. V. 374 221 1995 REMARK 1 REFN ISSN 0014-5793 REMARK 1 PMID 7589539 REMARK 1 DOI 10.1016/0014-5793(95)01111-Q REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 14011 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 731 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 865 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.4340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2953 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 137 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.17000 REMARK 3 B22 (A**2) : 0.48000 REMARK 3 B33 (A**2) : 0.37000 REMARK 3 B12 (A**2) : -0.24000 REMARK 3 B13 (A**2) : -0.16000 REMARK 3 B23 (A**2) : 0.39000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.721 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.299 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.204 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.130 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3047 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1955 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4154 ; 1.093 ; 1.904 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4740 ; 1.055 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 367 ; 6.291 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 150 ;40.258 ;24.533 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 439 ;11.135 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;15.648 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 422 ; 0.182 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3469 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 667 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 574 ; 0.148 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2033 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1441 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1544 ; 0.079 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 137 ; 0.133 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 2 ; 0.033 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 5 ; 0.072 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.133 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 51 ; 0.120 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.031 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1881 ; 0.244 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 763 ; 0.023 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2926 ; 0.436 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1425 ; 0.325 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1228 ; 0.508 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 199 4 REMARK 3 1 B 1 B 199 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2379 ; 0.30 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2379 ; 0.06 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3D6E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1000047649. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14739 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : 0.03700 REMARK 200 FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.2 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.12100 REMARK 200 R SYM FOR SHELL (I) : 0.12600 REMARK 200 FOR SHELL : 6.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1GBG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG MME 2000, 0.1M TRIS, PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 173 REMARK 465 ALA A 174 REMARK 465 GLY A 175 REMARK 465 VAL A 176 REMARK 465 ASP A 177 REMARK 465 GLU A 178 REMARK 465 TRP A 179 REMARK 465 LEU A 180 REMARK 465 GLY A 181 REMARK 465 SER A 182 REMARK 465 TYR A 183 REMARK 465 ASN A 184 REMARK 465 GLY A 185 REMARK 465 VAL A 186 REMARK 465 THR A 187 REMARK 465 PRO A 188 REMARK 465 ALA B 174 REMARK 465 GLY B 175 REMARK 465 VAL B 176 REMARK 465 ASP B 177 REMARK 465 GLU B 178 REMARK 465 TRP B 179 REMARK 465 LEU B 180 REMARK 465 GLY B 181 REMARK 465 SER B 182 REMARK 465 TYR B 183 REMARK 465 ASN B 184 REMARK 465 GLY B 185 REMARK 465 VAL B 186 REMARK 465 THR B 187 REMARK 465 PRO B 188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 39 OG1 CG2 REMARK 470 SER A 40 OG REMARK 470 PRO A 41 CG CD REMARK 470 TYR A 43 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 44 CG OD1 ND2 REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 PHE A 46 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 47 CG OD1 OD2 REMARK 470 THR B 39 OG1 CG2 REMARK 470 SER B 40 OG REMARK 470 PRO B 41 CG CD REMARK 470 SER B 42 OG REMARK 470 TYR B 43 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 PHE B 46 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 24 -16.45 153.81 REMARK 500 VAL A 26 72.92 126.13 REMARK 500 SER A 40 95.94 -166.81 REMARK 500 THR A 85 80.86 80.24 REMARK 500 VAL B 26 70.60 118.33 REMARK 500 SER B 40 95.56 -170.35 REMARK 500 TYR B 43 -92.02 -118.74 REMARK 500 LYS B 45 -62.78 -151.33 REMARK 500 ALA B 172 -91.06 -77.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 9 O REMARK 620 2 GLY A 32 O 82.7 REMARK 620 3 ASN A 194 O 72.9 85.7 REMARK 620 4 ASN A 194 OD1 149.4 90.0 77.0 REMARK 620 5 HOH A 227 O 86.1 93.8 158.9 124.1 REMARK 620 6 HOH A 260 O 94.7 171.7 101.1 96.1 78.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO B 9 O REMARK 620 2 GLY B 32 O 90.5 REMARK 620 3 ASN B 194 O 76.3 90.8 REMARK 620 4 ASN B 194 OD1 156.5 88.2 80.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GBG RELATED DB: PDB REMARK 900 NATIVE 1,3-1,4-BETA-GLUCANASE FROM BACILLUS LICHENIFORMIS REMARK 999 REMARK 999 SEQUENCE REMARK 999 THERE ARE CONFLICTS BETWEEN THE DATABASE REFERENCE SEQUENCE REMARK 999 AND THE COORDINATES. THE DEPOSITOR BELIEVE THAT THE SEQRES REMARK 999 IS CORRECT AND THE ELECTRON DENSITY SHOWS CLEAR EVIDENCE FOR REMARK 999 THESE RESIDUES. DBREF 3D6E A 1 201 UNP P27051 GUB_BACLI 30 243 DBREF 3D6E B 1 201 UNP P27051 GUB_BACLI 30 243 SEQADV 3D6E A UNP P27051 ALA 50 DELETION SEQADV 3D6E A UNP P27051 ASP 51 DELETION SEQADV 3D6E A UNP P27051 GLY 52 DELETION SEQADV 3D6E A UNP P27051 TYR 53 DELETION SEQADV 3D6E A UNP P27051 SER 54 DELETION SEQADV 3D6E A UNP P27051 ASN 55 DELETION SEQADV 3D6E A UNP P27051 GLY 56 DELETION SEQADV 3D6E A UNP P27051 ASN 57 DELETION SEQADV 3D6E A UNP P27051 MET 58 DELETION SEQADV 3D6E A UNP P27051 PHE 59 DELETION SEQADV 3D6E A UNP P27051 ASN 60 DELETION SEQADV 3D6E A UNP P27051 CYS 61 DELETION SEQADV 3D6E A UNP P27051 THR 62 DELETION SEQADV 3D6E ALA A 22 UNP P27051 ARG 64 ENGINEERED MUTATION SEQADV 3D6E PHE A 23 UNP P27051 ALA 65 ENGINEERED MUTATION SEQADV 3D6E ASP A 24 UNP P27051 ASN 66 ENGINEERED MUTATION SEQADV 3D6E HIS A 25 UNP P27051 ASN 67 ENGINEERED MUTATION SEQADV 3D6E GLY A 48 UNP P27051 CYS 90 ENGINEERED MUTATION SEQADV 3D6E GLY A 50 UNP P27051 GLU 92 ENGINEERED MUTATION SEQADV 3D6E GLN A 52 UNP P27051 ARG 94 ENGINEERED MUTATION SEQADV 3D6E ALA A 77 UNP P27051 SER 119 ENGINEERED MUTATION SEQADV 3D6E TYR A 79 UNP P27051 PHE 121 ENGINEERED MUTATION SEQADV 3D6E SER A 81 UNP P27051 TYR 123 ENGINEERED MUTATION SEQADV 3D6E TYR A 167 UNP P27051 MET 209 ENGINEERED MUTATION SEQADV 3D6E SER A 169 UNP P27051 ASN 211 ENGINEERED MUTATION SEQADV 3D6E ALA A 172 UNP P27051 ASN 214 ENGINEERED MUTATION SEQADV 3D6E TYR A 190 UNP P27051 SER 232 SEE REMARK 999 SEQADV 3D6E ALA A 191 UNP P27051 ARG 233 SEE REMARK 999 SEQADV 3D6E HIS A 192 UNP P27051 SER 234 SEE REMARK 999 SEQADV 3D6E TYR A 193 UNP P27051 LEU 235 SEE REMARK 999 SEQADV 3D6E ASN A 194 UNP P27051 HIS 236 SEE REMARK 999 SEQADV 3D6E B UNP P27051 ALA 50 DELETION SEQADV 3D6E B UNP P27051 ASP 51 DELETION SEQADV 3D6E B UNP P27051 GLY 52 DELETION SEQADV 3D6E B UNP P27051 TYR 53 DELETION SEQADV 3D6E B UNP P27051 SER 54 DELETION SEQADV 3D6E B UNP P27051 ASN 55 DELETION SEQADV 3D6E B UNP P27051 GLY 56 DELETION SEQADV 3D6E B UNP P27051 ASN 57 DELETION SEQADV 3D6E B UNP P27051 MET 58 DELETION SEQADV 3D6E B UNP P27051 PHE 59 DELETION SEQADV 3D6E B UNP P27051 ASN 60 DELETION SEQADV 3D6E B UNP P27051 CYS 61 DELETION SEQADV 3D6E B UNP P27051 THR 62 DELETION SEQADV 3D6E ALA B 22 UNP P27051 ARG 64 ENGINEERED MUTATION SEQADV 3D6E PHE B 23 UNP P27051 ALA 65 ENGINEERED MUTATION SEQADV 3D6E ASP B 24 UNP P27051 ASN 66 ENGINEERED MUTATION SEQADV 3D6E HIS B 25 UNP P27051 ASN 67 ENGINEERED MUTATION SEQADV 3D6E GLY B 48 UNP P27051 CYS 90 ENGINEERED MUTATION SEQADV 3D6E GLY B 50 UNP P27051 GLU 92 ENGINEERED MUTATION SEQADV 3D6E GLN B 52 UNP P27051 ARG 94 ENGINEERED MUTATION SEQADV 3D6E ALA B 77 UNP P27051 SER 119 ENGINEERED MUTATION SEQADV 3D6E TYR B 79 UNP P27051 PHE 121 ENGINEERED MUTATION SEQADV 3D6E SER B 81 UNP P27051 TYR 123 ENGINEERED MUTATION SEQADV 3D6E TYR B 167 UNP P27051 MET 209 ENGINEERED MUTATION SEQADV 3D6E SER B 169 UNP P27051 ASN 211 ENGINEERED MUTATION SEQADV 3D6E ALA B 172 UNP P27051 ASN 214 ENGINEERED MUTATION SEQADV 3D6E TYR B 190 UNP P27051 SER 232 SEE REMARK 999 SEQADV 3D6E ALA B 191 UNP P27051 ARG 233 SEE REMARK 999 SEQADV 3D6E HIS B 192 UNP P27051 SER 234 SEE REMARK 999 SEQADV 3D6E TYR B 193 UNP P27051 LEU 235 SEE REMARK 999 SEQADV 3D6E ASN B 194 UNP P27051 HIS 236 SEE REMARK 999 SEQRES 1 A 201 GLN THR GLY GLY SER PHE TYR GLU PRO PHE ASN ASN TYR SEQRES 2 A 201 ASN THR GLY LEU TRP GLN LYS TRP ALA PHE ASP HIS VAL SEQRES 3 A 201 SER MET THR SER LEU GLY GLU MET ARG LEU SER LEU THR SEQRES 4 A 201 SER PRO SER TYR ASN LYS PHE ASP GLY GLY GLY ASN GLN SEQRES 5 A 201 SER VAL GLN THR TYR GLY TYR GLY LEU TYR GLU VAL ASN SEQRES 6 A 201 MET LYS PRO ALA LYS ASN VAL GLY ILE VAL SER ALA PHE SEQRES 7 A 201 TYR THR SER THR GLY PRO THR ASP GLY THR PRO TRP ASP SEQRES 8 A 201 GLU ILE ASP ILE GLU PHE LEU GLY LYS ASP THR THR LYS SEQRES 9 A 201 VAL GLN PHE ASN TYR TYR THR ASN GLY VAL GLY ASN HIS SEQRES 10 A 201 GLU LYS ILE VAL ASN LEU GLY PHE ASP ALA ALA ASN SER SEQRES 11 A 201 TYR HIS THR TYR ALA PHE ASP TRP GLN PRO ASN SER ILE SEQRES 12 A 201 LYS TRP TYR VAL ASP GLY GLN LEU LYS HIS THR ALA THR SEQRES 13 A 201 THR GLN ILE PRO GLN THR PRO GLY LYS ILE TYR MET SER SEQRES 14 A 201 LEU TRP ALA GLY ALA GLY VAL ASP GLU TRP LEU GLY SER SEQRES 15 A 201 TYR ASN GLY VAL THR PRO LEU TYR ALA HIS TYR ASN TRP SEQRES 16 A 201 VAL ARG TYR THR LYS ARG SEQRES 1 B 201 GLN THR GLY GLY SER PHE TYR GLU PRO PHE ASN ASN TYR SEQRES 2 B 201 ASN THR GLY LEU TRP GLN LYS TRP ALA PHE ASP HIS VAL SEQRES 3 B 201 SER MET THR SER LEU GLY GLU MET ARG LEU SER LEU THR SEQRES 4 B 201 SER PRO SER TYR ASN LYS PHE ASP GLY GLY GLY ASN GLN SEQRES 5 B 201 SER VAL GLN THR TYR GLY TYR GLY LEU TYR GLU VAL ASN SEQRES 6 B 201 MET LYS PRO ALA LYS ASN VAL GLY ILE VAL SER ALA PHE SEQRES 7 B 201 TYR THR SER THR GLY PRO THR ASP GLY THR PRO TRP ASP SEQRES 8 B 201 GLU ILE ASP ILE GLU PHE LEU GLY LYS ASP THR THR LYS SEQRES 9 B 201 VAL GLN PHE ASN TYR TYR THR ASN GLY VAL GLY ASN HIS SEQRES 10 B 201 GLU LYS ILE VAL ASN LEU GLY PHE ASP ALA ALA ASN SER SEQRES 11 B 201 TYR HIS THR TYR ALA PHE ASP TRP GLN PRO ASN SER ILE SEQRES 12 B 201 LYS TRP TYR VAL ASP GLY GLN LEU LYS HIS THR ALA THR SEQRES 13 B 201 THR GLN ILE PRO GLN THR PRO GLY LYS ILE TYR MET SER SEQRES 14 B 201 LEU TRP ALA GLY ALA GLY VAL ASP GLU TRP LEU GLY SER SEQRES 15 B 201 TYR ASN GLY VAL THR PRO LEU TYR ALA HIS TYR ASN TRP SEQRES 16 B 201 VAL ARG TYR THR LYS ARG HET CA A 202 1 HET CA B 202 1 HETNAM CA CALCIUM ION FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *137(H2 O) SHEET 1 A 4 PHE A 6 GLU A 8 0 SHEET 2 A 4 TYR A 190 THR A 199 -1 O VAL A 196 N GLU A 8 SHEET 3 A 4 MET A 34 SER A 37 -1 N LEU A 36 O ALA A 191 SHEET 4 A 4 VAL A 26 MET A 28 -1 N SER A 27 O ARG A 35 SHEET 1 B 6 PHE A 6 GLU A 8 0 SHEET 2 B 6 TYR A 190 THR A 199 -1 O VAL A 196 N GLU A 8 SHEET 3 B 6 GLY A 60 LYS A 67 -1 N GLU A 63 O ARG A 197 SHEET 4 B 6 HIS A 132 GLN A 139 -1 O TYR A 134 N VAL A 64 SHEET 5 B 6 SER A 142 VAL A 147 -1 O SER A 142 N GLN A 139 SHEET 6 B 6 GLN A 150 ALA A 155 -1 O LYS A 152 N TRP A 145 SHEET 1 C 7 TRP A 18 LYS A 20 0 SHEET 2 C 7 GLY A 49 SER A 53 -1 O GLN A 52 N GLN A 19 SHEET 3 C 7 LYS A 165 TRP A 171 -1 O MET A 168 N ASN A 51 SHEET 4 C 7 VAL A 75 SER A 81 -1 N TYR A 79 O TYR A 167 SHEET 5 C 7 GLU A 92 LEU A 98 -1 O PHE A 97 N SER A 76 SHEET 6 C 7 LYS A 104 TYR A 110 -1 O GLN A 106 N GLU A 96 SHEET 7 C 7 LYS A 119 ASN A 122 -1 O VAL A 121 N VAL A 105 SHEET 1 D 4 PHE B 6 GLU B 8 0 SHEET 2 D 4 TYR B 190 THR B 199 -1 O VAL B 196 N GLU B 8 SHEET 3 D 4 MET B 34 SER B 37 -1 N LEU B 36 O ALA B 191 SHEET 4 D 4 VAL B 26 MET B 28 -1 N SER B 27 O ARG B 35 SHEET 1 E 6 PHE B 6 GLU B 8 0 SHEET 2 E 6 TYR B 190 THR B 199 -1 O VAL B 196 N GLU B 8 SHEET 3 E 6 GLY B 60 LYS B 67 -1 N ASN B 65 O ASN B 194 SHEET 4 E 6 HIS B 132 GLN B 139 -1 O TYR B 134 N VAL B 64 SHEET 5 E 6 SER B 142 VAL B 147 -1 O SER B 142 N GLN B 139 SHEET 6 E 6 GLN B 150 ALA B 155 -1 O LYS B 152 N TRP B 145 SHEET 1 F 7 TRP B 18 LYS B 20 0 SHEET 2 F 7 GLY B 50 SER B 53 -1 O GLN B 52 N GLN B 19 SHEET 3 F 7 LYS B 165 TRP B 171 -1 O MET B 168 N ASN B 51 SHEET 4 F 7 VAL B 75 SER B 81 -1 N TYR B 79 O TYR B 167 SHEET 5 F 7 GLU B 92 LEU B 98 -1 O PHE B 97 N SER B 76 SHEET 6 F 7 LYS B 104 TYR B 110 -1 O GLN B 106 N GLU B 96 SHEET 7 F 7 LYS B 119 ASN B 122 -1 O VAL B 121 N VAL B 105 LINK O PRO A 9 CA CA A 202 1555 1555 2.36 LINK O GLY A 32 CA CA A 202 1555 1555 2.37 LINK O ASN A 194 CA CA A 202 1555 1555 2.45 LINK OD1 ASN A 194 CA CA A 202 1555 1555 2.50 LINK CA CA A 202 O HOH A 227 1555 1555 2.63 LINK CA CA A 202 O HOH A 260 1555 1555 2.75 LINK O PRO B 9 CA CA B 202 1555 1555 2.32 LINK O GLY B 32 CA CA B 202 1555 1555 2.33 LINK O ASN B 194 CA CA B 202 1555 1555 2.38 LINK OD1 ASN B 194 CA CA B 202 1555 1555 2.45 CISPEP 1 HIS A 25 VAL A 26 0 -29.59 CISPEP 2 THR A 39 SER A 40 0 -1.27 CISPEP 3 SER A 42 TYR A 43 0 -1.58 CISPEP 4 ASN A 44 LYS A 45 0 7.96 CISPEP 5 LYS A 45 PHE A 46 0 -0.54 CISPEP 6 GLY A 83 PRO A 84 0 -7.66 CISPEP 7 PRO A 84 THR A 85 0 2.00 CISPEP 8 HIS B 25 VAL B 26 0 -2.90 CISPEP 9 THR B 39 SER B 40 0 -0.40 CISPEP 10 SER B 42 TYR B 43 0 2.53 CISPEP 11 ASN B 44 LYS B 45 0 5.80 CISPEP 12 LYS B 45 PHE B 46 0 6.62 CISPEP 13 PHE B 46 ASP B 47 0 -2.34 CISPEP 14 GLY B 48 GLY B 49 0 2.26 CISPEP 15 GLY B 49 GLY B 50 0 3.57 CISPEP 16 GLY B 83 PRO B 84 0 3.26 CISPEP 17 ASP B 86 GLY B 87 0 -1.25 SITE 1 AC1 5 PRO A 9 GLY A 32 ASN A 194 HOH A 227 SITE 2 AC1 5 HOH A 260 SITE 1 AC2 3 PRO B 9 GLY B 32 ASN B 194 CRYST1 39.551 54.813 54.910 61.38 85.72 86.10 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025284 -0.001724 -0.001218 0.00000 SCALE2 0.000000 0.018286 -0.009907 0.00000 SCALE3 0.000000 0.000000 0.020770 0.00000