data_3D6J # _entry.id 3D6J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3D6J RCSB RCSB047654 WWPDB D_1000047654 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC60104 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3D6J _pdbx_database_status.recvd_initial_deposition_date 2008-05-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chang, C.' 1 'Wu, R.' 2 'Cobb, G.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal structure of Putative haloacid dehalogenase-like hydrolase from Bacteroides fragilis' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chang, C.' 1 primary 'Wu, R.' 2 primary 'Cobb, G.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 3D6J _cell.length_a 62.620 _cell.length_b 62.620 _cell.length_c 133.913 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3D6J _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative haloacid dehalogenase-like hydrolase' 25315.854 1 ? ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 222 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDD(MSE)IKRTIGKTLEESFSILTGITDADQLESF RQEYSKEADIY(MSE)NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH(MSE)PDDWFDIIIGGEDVTHH KPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSG(MSE)TTAQEFQAYPYDRIISTLGQLISVPEDK SGCPL ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGITDADQLESFRQEYSKEA DIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKA CPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCPL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC60104 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 LYS n 1 6 TYR n 1 7 THR n 1 8 VAL n 1 9 TYR n 1 10 LEU n 1 11 PHE n 1 12 ASP n 1 13 PHE n 1 14 ASP n 1 15 TYR n 1 16 THR n 1 17 LEU n 1 18 ALA n 1 19 ASP n 1 20 SER n 1 21 SER n 1 22 ARG n 1 23 GLY n 1 24 ILE n 1 25 VAL n 1 26 THR n 1 27 CYS n 1 28 PHE n 1 29 ARG n 1 30 SER n 1 31 VAL n 1 32 LEU n 1 33 GLU n 1 34 ARG n 1 35 HIS n 1 36 GLY n 1 37 TYR n 1 38 THR n 1 39 GLY n 1 40 ILE n 1 41 THR n 1 42 ASP n 1 43 ASP n 1 44 MSE n 1 45 ILE n 1 46 LYS n 1 47 ARG n 1 48 THR n 1 49 ILE n 1 50 GLY n 1 51 LYS n 1 52 THR n 1 53 LEU n 1 54 GLU n 1 55 GLU n 1 56 SER n 1 57 PHE n 1 58 SER n 1 59 ILE n 1 60 LEU n 1 61 THR n 1 62 GLY n 1 63 ILE n 1 64 THR n 1 65 ASP n 1 66 ALA n 1 67 ASP n 1 68 GLN n 1 69 LEU n 1 70 GLU n 1 71 SER n 1 72 PHE n 1 73 ARG n 1 74 GLN n 1 75 GLU n 1 76 TYR n 1 77 SER n 1 78 LYS n 1 79 GLU n 1 80 ALA n 1 81 ASP n 1 82 ILE n 1 83 TYR n 1 84 MSE n 1 85 ASN n 1 86 ALA n 1 87 ASN n 1 88 THR n 1 89 ILE n 1 90 LEU n 1 91 PHE n 1 92 PRO n 1 93 ASP n 1 94 THR n 1 95 LEU n 1 96 PRO n 1 97 THR n 1 98 LEU n 1 99 THR n 1 100 HIS n 1 101 LEU n 1 102 LYS n 1 103 LYS n 1 104 GLN n 1 105 GLY n 1 106 ILE n 1 107 ARG n 1 108 ILE n 1 109 GLY n 1 110 ILE n 1 111 ILE n 1 112 SER n 1 113 THR n 1 114 LYS n 1 115 TYR n 1 116 ARG n 1 117 PHE n 1 118 ARG n 1 119 ILE n 1 120 LEU n 1 121 SER n 1 122 PHE n 1 123 LEU n 1 124 ARG n 1 125 ASN n 1 126 HIS n 1 127 MSE n 1 128 PRO n 1 129 ASP n 1 130 ASP n 1 131 TRP n 1 132 PHE n 1 133 ASP n 1 134 ILE n 1 135 ILE n 1 136 ILE n 1 137 GLY n 1 138 GLY n 1 139 GLU n 1 140 ASP n 1 141 VAL n 1 142 THR n 1 143 HIS n 1 144 HIS n 1 145 LYS n 1 146 PRO n 1 147 ASP n 1 148 PRO n 1 149 GLU n 1 150 GLY n 1 151 LEU n 1 152 LEU n 1 153 LEU n 1 154 ALA n 1 155 ILE n 1 156 ASP n 1 157 ARG n 1 158 LEU n 1 159 LYS n 1 160 ALA n 1 161 CYS n 1 162 PRO n 1 163 GLU n 1 164 GLU n 1 165 VAL n 1 166 LEU n 1 167 TYR n 1 168 ILE n 1 169 GLY n 1 170 ASP n 1 171 SER n 1 172 THR n 1 173 VAL n 1 174 ASP n 1 175 ALA n 1 176 GLY n 1 177 THR n 1 178 ALA n 1 179 ALA n 1 180 ALA n 1 181 ALA n 1 182 GLY n 1 183 VAL n 1 184 SER n 1 185 PHE n 1 186 THR n 1 187 GLY n 1 188 VAL n 1 189 THR n 1 190 SER n 1 191 GLY n 1 192 MSE n 1 193 THR n 1 194 THR n 1 195 ALA n 1 196 GLN n 1 197 GLU n 1 198 PHE n 1 199 GLN n 1 200 ALA n 1 201 TYR n 1 202 PRO n 1 203 TYR n 1 204 ASP n 1 205 ARG n 1 206 ILE n 1 207 ILE n 1 208 SER n 1 209 THR n 1 210 LEU n 1 211 GLY n 1 212 GLN n 1 213 LEU n 1 214 ILE n 1 215 SER n 1 216 VAL n 1 217 PRO n 1 218 GLU n 1 219 ASP n 1 220 LYS n 1 221 SER n 1 222 GLY n 1 223 CYS n 1 224 PRO n 1 225 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BF0931 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides fragilis NCTC 9343' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272559 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG19b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5LGR4_BACFN _struct_ref.pdbx_db_accession Q5LGR4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGITDADQLESFRQEYSKEADIY MNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPE EVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCPL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3D6J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 225 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5LGR4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 222 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 222 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3D6J SER A 1 ? UNP Q5LGR4 ? ? 'EXPRESSION TAG' -2 1 1 3D6J ASN A 2 ? UNP Q5LGR4 ? ? 'EXPRESSION TAG' -1 2 1 3D6J ALA A 3 ? UNP Q5LGR4 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3D6J _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_percent_sol 52.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details '1.0 M Sodium phosphate pH5.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type CUSTOM-MADE _diffrn_detector.pdbx_collection_date 2008-04-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97857 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97857 # _reflns.entry_id 3D6J _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 2 _reflns.d_resolution_low 50 _reflns.number_all 8776 _reflns.number_obs 18723 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.52 _reflns.B_iso_Wilson_estimate 24.0 _reflns.pdbx_redundancy 9.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.02 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.428 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.17 _reflns_shell.pdbx_redundancy 6.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 465 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3D6J _refine.ls_number_reflns_obs 18404 _refine.ls_number_reflns_all 18404 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 98.18 _refine.ls_R_factor_obs 0.19975 _refine.ls_R_factor_all 0.19975 _refine.ls_R_factor_R_work 0.19786 _refine.ls_R_factor_R_free 0.235 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 940 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.927 _refine.B_iso_mean 29.087 _refine.aniso_B[1][1] 1.44 _refine.aniso_B[2][2] 1.44 _refine.aniso_B[3][3] -2.87 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.182 _refine.pdbx_overall_ESU_R_Free 0.161 _refine.overall_SU_ML 0.126 _refine.overall_SU_B 8.272 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1658 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 222 _refine_hist.number_atoms_total 1896 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1762 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.525 1.972 ? 2400 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.750 5.000 ? 226 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.542 23.205 ? 78 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.759 15.000 ? 306 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.862 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.120 0.200 ? 276 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1318 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.209 0.200 ? 847 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.306 0.200 ? 1216 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.180 0.200 ? 207 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.215 0.200 ? 29 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.174 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.740 1.500 ? 1103 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.138 2.000 ? 1749 'X-RAY DIFFRACTION' ? r_scbond_it 2.021 3.000 ? 743 'X-RAY DIFFRACTION' ? r_scangle_it 2.931 4.500 ? 643 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 1220 _refine_ls_shell.R_factor_R_work 0.243 _refine_ls_shell.percent_reflns_obs 97.16 _refine_ls_shell.R_factor_R_free 0.31 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1300 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3D6J _struct.title 'Crystal structure of Putative haloacid dehalogenase-like hydrolase from Bacteroides fragilis' _struct.pdbx_descriptor 'Putative haloacid dehalogenase-like hydrolase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3D6J _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;Bacteroides fragilis, haloacid dehalogenase-like hydrolase, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Hydrolase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 20 ? HIS A 35 ? SER A 17 HIS A 32 1 ? 16 HELX_P HELX_P2 2 THR A 41 ? ARG A 47 ? THR A 38 ARG A 44 1 ? 7 HELX_P HELX_P3 3 THR A 52 ? GLY A 62 ? THR A 49 GLY A 59 1 ? 11 HELX_P HELX_P4 4 ASP A 65 ? MSE A 84 ? ASP A 62 MSE A 81 1 ? 20 HELX_P HELX_P5 5 ASN A 85 ? THR A 88 ? ASN A 82 THR A 85 5 ? 4 HELX_P HELX_P6 6 ASP A 93 ? GLY A 105 ? ASP A 90 GLY A 102 1 ? 13 HELX_P HELX_P7 7 TYR A 115 ? ASN A 125 ? TYR A 112 ASN A 122 1 ? 11 HELX_P HELX_P8 8 GLY A 137 ? VAL A 141 ? GLY A 134 VAL A 138 5 ? 5 HELX_P HELX_P9 9 PRO A 148 ? LEU A 158 ? PRO A 145 LEU A 155 1 ? 11 HELX_P HELX_P10 10 CYS A 161 ? GLU A 163 ? CYS A 158 GLU A 160 5 ? 3 HELX_P HELX_P11 11 SER A 171 ? GLY A 182 ? SER A 168 GLY A 179 1 ? 12 HELX_P HELX_P12 12 GLN A 196 ? TYR A 201 ? GLN A 193 TYR A 198 5 ? 6 HELX_P HELX_P13 13 THR A 209 ? ILE A 214 ? THR A 206 ILE A 211 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASP 43 C ? ? ? 1_555 A MSE 44 N ? ? A ASP 40 A MSE 41 1_555 ? ? ? ? ? ? ? 1.337 ? covale2 covale ? ? A MSE 44 C ? ? ? 1_555 A ILE 45 N ? ? A MSE 41 A ILE 42 1_555 ? ? ? ? ? ? ? 1.318 ? covale3 covale ? ? A TYR 83 C ? ? ? 1_555 A MSE 84 N ? ? A TYR 80 A MSE 81 1_555 ? ? ? ? ? ? ? 1.322 ? covale4 covale ? ? A MSE 84 C ? ? ? 1_555 A ASN 85 N ? ? A MSE 81 A ASN 82 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A HIS 126 C ? ? ? 1_555 A MSE 127 N ? ? A HIS 123 A MSE 124 1_555 ? ? ? ? ? ? ? 1.343 ? covale6 covale ? ? A MSE 127 C ? ? ? 1_555 A PRO 128 N ? ? A MSE 124 A PRO 125 1_555 ? ? ? ? ? ? ? 1.350 ? covale7 covale ? ? A GLY 191 C ? ? ? 1_555 A MSE 192 N ? ? A GLY 188 A MSE 189 1_555 ? ? ? ? ? ? ? 1.334 ? covale8 covale ? ? A MSE 192 C ? ? ? 1_555 A THR 193 N ? ? A MSE 189 A THR 190 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 129 A . ? ASP 126 A ASP 130 A ? ASP 127 A 1 -15.81 2 LYS 145 A . ? LYS 142 A PRO 146 A ? PRO 143 A 1 7.51 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 134 ? ILE A 136 ? ILE A 131 ILE A 133 A 2 ARG A 107 ? ILE A 111 ? ARG A 104 ILE A 108 A 3 VAL A 8 ? PHE A 11 ? VAL A 5 PHE A 8 A 4 VAL A 165 ? GLY A 169 ? VAL A 162 GLY A 166 A 5 SER A 184 ? VAL A 188 ? SER A 181 VAL A 185 A 6 ARG A 205 ? ILE A 207 ? ARG A 202 ILE A 204 B 1 ALA A 18 ? ASP A 19 ? ALA A 15 ASP A 16 B 2 ILE A 89 ? LEU A 90 ? ILE A 86 LEU A 87 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 136 ? O ILE A 133 N ILE A 110 ? N ILE A 107 A 2 3 O GLY A 109 ? O GLY A 106 N PHE A 11 ? N PHE A 8 A 3 4 N LEU A 10 ? N LEU A 7 O LEU A 166 ? O LEU A 163 A 4 5 N TYR A 167 ? N TYR A 164 O SER A 184 ? O SER A 181 A 5 6 N GLY A 187 ? N GLY A 184 O ILE A 207 ? O ILE A 204 B 1 2 N ASP A 19 ? N ASP A 16 O ILE A 89 ? O ILE A 86 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE PO4 A 251' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE PO4 A 252' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A 253' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ASP A 12 ? ASP A 9 . ? 1_555 ? 2 AC1 8 PHE A 13 ? PHE A 10 . ? 1_555 ? 3 AC1 8 ASP A 14 ? ASP A 11 . ? 1_555 ? 4 AC1 8 SER A 112 ? SER A 109 . ? 1_555 ? 5 AC1 8 THR A 113 ? THR A 110 . ? 1_555 ? 6 AC1 8 LYS A 145 ? LYS A 142 . ? 1_555 ? 7 AC1 8 HOH E . ? HOH A 261 . ? 1_555 ? 8 AC1 8 HOH E . ? HOH A 401 . ? 1_555 ? 9 AC2 9 GLU A 55 ? GLU A 52 . ? 1_555 ? 10 AC2 9 THR A 142 ? THR A 139 . ? 1_555 ? 11 AC2 9 HIS A 143 ? HIS A 140 . ? 1_555 ? 12 AC2 9 HIS A 144 ? HIS A 141 . ? 1_555 ? 13 AC2 9 HOH E . ? HOH A 297 . ? 1_555 ? 14 AC2 9 HOH E . ? HOH A 337 . ? 1_555 ? 15 AC2 9 HOH E . ? HOH A 355 . ? 1_555 ? 16 AC2 9 HOH E . ? HOH A 370 . ? 1_555 ? 17 AC2 9 HOH E . ? HOH A 405 . ? 1_555 ? 18 AC3 6 ASN A 85 ? ASN A 82 . ? 1_555 ? 19 AC3 6 SER A 121 ? SER A 118 . ? 1_555 ? 20 AC3 6 ASN A 125 ? ASN A 122 . ? 1_555 ? 21 AC3 6 HOH E . ? HOH A 267 . ? 1_555 ? 22 AC3 6 HOH E . ? HOH A 369 . ? 1_555 ? 23 AC3 6 HOH E . ? HOH A 385 . ? 1_555 ? # _database_PDB_matrix.entry_id 3D6J _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3D6J _atom_sites.fract_transf_matrix[1][1] 0.015969 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015969 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007468 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MSE 4 1 ? ? ? A . n A 1 5 LYS 5 2 2 LYS LYS A . n A 1 6 TYR 6 3 3 TYR TYR A . n A 1 7 THR 7 4 4 THR THR A . n A 1 8 VAL 8 5 5 VAL VAL A . n A 1 9 TYR 9 6 6 TYR TYR A . n A 1 10 LEU 10 7 7 LEU LEU A . n A 1 11 PHE 11 8 8 PHE PHE A . n A 1 12 ASP 12 9 9 ASP ASP A . n A 1 13 PHE 13 10 10 PHE PHE A . n A 1 14 ASP 14 11 11 ASP ASP A . n A 1 15 TYR 15 12 12 TYR TYR A . n A 1 16 THR 16 13 13 THR THR A . n A 1 17 LEU 17 14 14 LEU LEU A . n A 1 18 ALA 18 15 15 ALA ALA A . n A 1 19 ASP 19 16 16 ASP ASP A . n A 1 20 SER 20 17 17 SER SER A . n A 1 21 SER 21 18 18 SER SER A . n A 1 22 ARG 22 19 19 ARG ARG A . n A 1 23 GLY 23 20 20 GLY GLY A . n A 1 24 ILE 24 21 21 ILE ILE A . n A 1 25 VAL 25 22 22 VAL VAL A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 CYS 27 24 24 CYS CYS A . n A 1 28 PHE 28 25 25 PHE PHE A . n A 1 29 ARG 29 26 26 ARG ARG A . n A 1 30 SER 30 27 27 SER SER A . n A 1 31 VAL 31 28 28 VAL VAL A . n A 1 32 LEU 32 29 29 LEU LEU A . n A 1 33 GLU 33 30 30 GLU GLU A . n A 1 34 ARG 34 31 31 ARG ARG A . n A 1 35 HIS 35 32 32 HIS HIS A . n A 1 36 GLY 36 33 33 GLY GLY A . n A 1 37 TYR 37 34 34 TYR TYR A . n A 1 38 THR 38 35 35 THR THR A . n A 1 39 GLY 39 36 36 GLY GLY A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 THR 41 38 38 THR THR A . n A 1 42 ASP 42 39 39 ASP ASP A . n A 1 43 ASP 43 40 40 ASP ASP A . n A 1 44 MSE 44 41 41 MSE MSE A . n A 1 45 ILE 45 42 42 ILE ILE A . n A 1 46 LYS 46 43 43 LYS LYS A . n A 1 47 ARG 47 44 44 ARG ARG A . n A 1 48 THR 48 45 45 THR THR A . n A 1 49 ILE 49 46 46 ILE ILE A . n A 1 50 GLY 50 47 47 GLY GLY A . n A 1 51 LYS 51 48 48 LYS LYS A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 LEU 53 50 50 LEU LEU A . n A 1 54 GLU 54 51 51 GLU GLU A . n A 1 55 GLU 55 52 52 GLU GLU A . n A 1 56 SER 56 53 53 SER SER A . n A 1 57 PHE 57 54 54 PHE PHE A . n A 1 58 SER 58 55 55 SER SER A . n A 1 59 ILE 59 56 56 ILE ILE A . n A 1 60 LEU 60 57 57 LEU LEU A . n A 1 61 THR 61 58 58 THR THR A . n A 1 62 GLY 62 59 59 GLY GLY A . n A 1 63 ILE 63 60 60 ILE ILE A . n A 1 64 THR 64 61 61 THR THR A . n A 1 65 ASP 65 62 62 ASP ASP A . n A 1 66 ALA 66 63 63 ALA ALA A . n A 1 67 ASP 67 64 64 ASP ASP A . n A 1 68 GLN 68 65 65 GLN GLN A . n A 1 69 LEU 69 66 66 LEU LEU A . n A 1 70 GLU 70 67 67 GLU GLU A . n A 1 71 SER 71 68 68 SER SER A . n A 1 72 PHE 72 69 69 PHE PHE A . n A 1 73 ARG 73 70 70 ARG ARG A . n A 1 74 GLN 74 71 71 GLN GLN A . n A 1 75 GLU 75 72 72 GLU GLU A . n A 1 76 TYR 76 73 73 TYR TYR A . n A 1 77 SER 77 74 74 SER SER A . n A 1 78 LYS 78 75 75 LYS LYS A . n A 1 79 GLU 79 76 76 GLU GLU A . n A 1 80 ALA 80 77 77 ALA ALA A . n A 1 81 ASP 81 78 78 ASP ASP A . n A 1 82 ILE 82 79 79 ILE ILE A . n A 1 83 TYR 83 80 80 TYR TYR A . n A 1 84 MSE 84 81 81 MSE MSE A . n A 1 85 ASN 85 82 82 ASN ASN A . n A 1 86 ALA 86 83 83 ALA ALA A . n A 1 87 ASN 87 84 84 ASN ASN A . n A 1 88 THR 88 85 85 THR THR A . n A 1 89 ILE 89 86 86 ILE ILE A . n A 1 90 LEU 90 87 87 LEU LEU A . n A 1 91 PHE 91 88 88 PHE PHE A . n A 1 92 PRO 92 89 89 PRO PRO A . n A 1 93 ASP 93 90 90 ASP ASP A . n A 1 94 THR 94 91 91 THR THR A . n A 1 95 LEU 95 92 92 LEU LEU A . n A 1 96 PRO 96 93 93 PRO PRO A . n A 1 97 THR 97 94 94 THR THR A . n A 1 98 LEU 98 95 95 LEU LEU A . n A 1 99 THR 99 96 96 THR THR A . n A 1 100 HIS 100 97 97 HIS HIS A . n A 1 101 LEU 101 98 98 LEU LEU A . n A 1 102 LYS 102 99 99 LYS LYS A . n A 1 103 LYS 103 100 100 LYS LYS A . n A 1 104 GLN 104 101 101 GLN GLN A . n A 1 105 GLY 105 102 102 GLY GLY A . n A 1 106 ILE 106 103 103 ILE ILE A . n A 1 107 ARG 107 104 104 ARG ARG A . n A 1 108 ILE 108 105 105 ILE ILE A . n A 1 109 GLY 109 106 106 GLY GLY A . n A 1 110 ILE 110 107 107 ILE ILE A . n A 1 111 ILE 111 108 108 ILE ILE A . n A 1 112 SER 112 109 109 SER SER A . n A 1 113 THR 113 110 110 THR THR A . n A 1 114 LYS 114 111 111 LYS LYS A . n A 1 115 TYR 115 112 112 TYR TYR A . n A 1 116 ARG 116 113 113 ARG ARG A . n A 1 117 PHE 117 114 114 PHE PHE A . n A 1 118 ARG 118 115 115 ARG ARG A . n A 1 119 ILE 119 116 116 ILE ILE A . n A 1 120 LEU 120 117 117 LEU LEU A . n A 1 121 SER 121 118 118 SER SER A . n A 1 122 PHE 122 119 119 PHE PHE A . n A 1 123 LEU 123 120 120 LEU LEU A . n A 1 124 ARG 124 121 121 ARG ARG A . n A 1 125 ASN 125 122 122 ASN ASN A . n A 1 126 HIS 126 123 123 HIS HIS A . n A 1 127 MSE 127 124 124 MSE MSE A . n A 1 128 PRO 128 125 125 PRO PRO A . n A 1 129 ASP 129 126 126 ASP ASP A . n A 1 130 ASP 130 127 127 ASP ASP A . n A 1 131 TRP 131 128 128 TRP TRP A . n A 1 132 PHE 132 129 129 PHE PHE A . n A 1 133 ASP 133 130 130 ASP ASP A . n A 1 134 ILE 134 131 131 ILE ILE A . n A 1 135 ILE 135 132 132 ILE ILE A . n A 1 136 ILE 136 133 133 ILE ILE A . n A 1 137 GLY 137 134 134 GLY GLY A . n A 1 138 GLY 138 135 135 GLY GLY A . n A 1 139 GLU 139 136 136 GLU GLU A . n A 1 140 ASP 140 137 137 ASP ASP A . n A 1 141 VAL 141 138 138 VAL VAL A . n A 1 142 THR 142 139 139 THR THR A . n A 1 143 HIS 143 140 140 HIS HIS A . n A 1 144 HIS 144 141 141 HIS HIS A . n A 1 145 LYS 145 142 142 LYS LYS A . n A 1 146 PRO 146 143 143 PRO PRO A . n A 1 147 ASP 147 144 144 ASP ASP A . n A 1 148 PRO 148 145 145 PRO PRO A . n A 1 149 GLU 149 146 146 GLU GLU A . n A 1 150 GLY 150 147 147 GLY GLY A . n A 1 151 LEU 151 148 148 LEU LEU A . n A 1 152 LEU 152 149 149 LEU LEU A . n A 1 153 LEU 153 150 150 LEU LEU A . n A 1 154 ALA 154 151 151 ALA ALA A . n A 1 155 ILE 155 152 152 ILE ILE A . n A 1 156 ASP 156 153 153 ASP ASP A . n A 1 157 ARG 157 154 154 ARG ARG A . n A 1 158 LEU 158 155 155 LEU LEU A . n A 1 159 LYS 159 156 156 LYS LYS A . n A 1 160 ALA 160 157 157 ALA ALA A . n A 1 161 CYS 161 158 158 CYS CYS A . n A 1 162 PRO 162 159 159 PRO PRO A . n A 1 163 GLU 163 160 160 GLU GLU A . n A 1 164 GLU 164 161 161 GLU GLU A . n A 1 165 VAL 165 162 162 VAL VAL A . n A 1 166 LEU 166 163 163 LEU LEU A . n A 1 167 TYR 167 164 164 TYR TYR A . n A 1 168 ILE 168 165 165 ILE ILE A . n A 1 169 GLY 169 166 166 GLY GLY A . n A 1 170 ASP 170 167 167 ASP ASP A . n A 1 171 SER 171 168 168 SER SER A . n A 1 172 THR 172 169 169 THR THR A . n A 1 173 VAL 173 170 170 VAL VAL A . n A 1 174 ASP 174 171 171 ASP ASP A . n A 1 175 ALA 175 172 172 ALA ALA A . n A 1 176 GLY 176 173 173 GLY GLY A . n A 1 177 THR 177 174 174 THR THR A . n A 1 178 ALA 178 175 175 ALA ALA A . n A 1 179 ALA 179 176 176 ALA ALA A . n A 1 180 ALA 180 177 177 ALA ALA A . n A 1 181 ALA 181 178 178 ALA ALA A . n A 1 182 GLY 182 179 179 GLY GLY A . n A 1 183 VAL 183 180 180 VAL VAL A . n A 1 184 SER 184 181 181 SER SER A . n A 1 185 PHE 185 182 182 PHE PHE A . n A 1 186 THR 186 183 183 THR THR A . n A 1 187 GLY 187 184 184 GLY GLY A . n A 1 188 VAL 188 185 185 VAL VAL A . n A 1 189 THR 189 186 186 THR THR A . n A 1 190 SER 190 187 187 SER SER A . n A 1 191 GLY 191 188 188 GLY GLY A . n A 1 192 MSE 192 189 189 MSE MSE A . n A 1 193 THR 193 190 190 THR THR A . n A 1 194 THR 194 191 191 THR THR A . n A 1 195 ALA 195 192 192 ALA ALA A . n A 1 196 GLN 196 193 193 GLN GLN A . n A 1 197 GLU 197 194 194 GLU GLU A . n A 1 198 PHE 198 195 195 PHE PHE A . n A 1 199 GLN 199 196 196 GLN GLN A . n A 1 200 ALA 200 197 197 ALA ALA A . n A 1 201 TYR 201 198 198 TYR TYR A . n A 1 202 PRO 202 199 199 PRO PRO A . n A 1 203 TYR 203 200 200 TYR TYR A . n A 1 204 ASP 204 201 201 ASP ASP A . n A 1 205 ARG 205 202 202 ARG ARG A . n A 1 206 ILE 206 203 203 ILE ILE A . n A 1 207 ILE 207 204 204 ILE ILE A . n A 1 208 SER 208 205 205 SER SER A . n A 1 209 THR 209 206 206 THR THR A . n A 1 210 LEU 210 207 207 LEU LEU A . n A 1 211 GLY 211 208 208 GLY GLY A . n A 1 212 GLN 212 209 209 GLN GLN A . n A 1 213 LEU 213 210 210 LEU LEU A . n A 1 214 ILE 214 211 211 ILE ILE A . n A 1 215 SER 215 212 ? ? ? A . n A 1 216 VAL 216 213 ? ? ? A . n A 1 217 PRO 217 214 ? ? ? A . n A 1 218 GLU 218 215 ? ? ? A . n A 1 219 ASP 219 216 ? ? ? A . n A 1 220 LYS 220 217 ? ? ? A . n A 1 221 SER 221 218 ? ? ? A . n A 1 222 GLY 222 219 ? ? ? A . n A 1 223 CYS 223 220 ? ? ? A . n A 1 224 PRO 224 221 ? ? ? A . n A 1 225 LEU 225 222 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 251 251 PO4 PO4 A . C 2 PO4 1 252 252 PO4 PO4 A . D 3 GOL 1 253 253 GOL GOL A . E 4 HOH 1 254 1 HOH HOH A . E 4 HOH 2 255 2 HOH HOH A . E 4 HOH 3 256 3 HOH HOH A . E 4 HOH 4 257 4 HOH HOH A . E 4 HOH 5 258 5 HOH HOH A . E 4 HOH 6 259 6 HOH HOH A . E 4 HOH 7 260 7 HOH HOH A . E 4 HOH 8 261 8 HOH HOH A . E 4 HOH 9 262 9 HOH HOH A . E 4 HOH 10 263 10 HOH HOH A . E 4 HOH 11 264 11 HOH HOH A . E 4 HOH 12 265 12 HOH HOH A . E 4 HOH 13 266 13 HOH HOH A . E 4 HOH 14 267 14 HOH HOH A . E 4 HOH 15 268 15 HOH HOH A . E 4 HOH 16 269 16 HOH HOH A . E 4 HOH 17 270 17 HOH HOH A . E 4 HOH 18 271 18 HOH HOH A . E 4 HOH 19 272 19 HOH HOH A . E 4 HOH 20 273 20 HOH HOH A . E 4 HOH 21 274 21 HOH HOH A . E 4 HOH 22 275 22 HOH HOH A . E 4 HOH 23 276 23 HOH HOH A . E 4 HOH 24 277 24 HOH HOH A . E 4 HOH 25 278 25 HOH HOH A . E 4 HOH 26 279 26 HOH HOH A . E 4 HOH 27 280 27 HOH HOH A . E 4 HOH 28 281 28 HOH HOH A . E 4 HOH 29 282 29 HOH HOH A . E 4 HOH 30 283 30 HOH HOH A . E 4 HOH 31 284 31 HOH HOH A . E 4 HOH 32 285 32 HOH HOH A . E 4 HOH 33 286 33 HOH HOH A . E 4 HOH 34 287 34 HOH HOH A . E 4 HOH 35 288 35 HOH HOH A . E 4 HOH 36 289 36 HOH HOH A . E 4 HOH 37 290 37 HOH HOH A . E 4 HOH 38 291 38 HOH HOH A . E 4 HOH 39 292 39 HOH HOH A . E 4 HOH 40 293 40 HOH HOH A . E 4 HOH 41 294 41 HOH HOH A . E 4 HOH 42 295 42 HOH HOH A . E 4 HOH 43 296 43 HOH HOH A . E 4 HOH 44 297 44 HOH HOH A . E 4 HOH 45 298 45 HOH HOH A . E 4 HOH 46 299 46 HOH HOH A . E 4 HOH 47 300 47 HOH HOH A . E 4 HOH 48 301 48 HOH HOH A . E 4 HOH 49 302 49 HOH HOH A . E 4 HOH 50 303 50 HOH HOH A . E 4 HOH 51 304 51 HOH HOH A . E 4 HOH 52 305 52 HOH HOH A . E 4 HOH 53 306 53 HOH HOH A . E 4 HOH 54 307 54 HOH HOH A . E 4 HOH 55 308 55 HOH HOH A . E 4 HOH 56 309 56 HOH HOH A . E 4 HOH 57 310 57 HOH HOH A . E 4 HOH 58 311 58 HOH HOH A . E 4 HOH 59 312 59 HOH HOH A . E 4 HOH 60 313 60 HOH HOH A . E 4 HOH 61 314 61 HOH HOH A . E 4 HOH 62 315 62 HOH HOH A . E 4 HOH 63 316 63 HOH HOH A . E 4 HOH 64 317 64 HOH HOH A . E 4 HOH 65 318 65 HOH HOH A . E 4 HOH 66 319 66 HOH HOH A . E 4 HOH 67 320 67 HOH HOH A . E 4 HOH 68 321 68 HOH HOH A . E 4 HOH 69 322 69 HOH HOH A . E 4 HOH 70 323 70 HOH HOH A . E 4 HOH 71 324 71 HOH HOH A . E 4 HOH 72 325 72 HOH HOH A . E 4 HOH 73 326 73 HOH HOH A . E 4 HOH 74 327 74 HOH HOH A . E 4 HOH 75 328 75 HOH HOH A . E 4 HOH 76 329 76 HOH HOH A . E 4 HOH 77 330 77 HOH HOH A . E 4 HOH 78 331 78 HOH HOH A . E 4 HOH 79 332 79 HOH HOH A . E 4 HOH 80 333 80 HOH HOH A . E 4 HOH 81 334 81 HOH HOH A . E 4 HOH 82 335 82 HOH HOH A . E 4 HOH 83 336 83 HOH HOH A . E 4 HOH 84 337 84 HOH HOH A . E 4 HOH 85 338 85 HOH HOH A . E 4 HOH 86 339 86 HOH HOH A . E 4 HOH 87 340 87 HOH HOH A . E 4 HOH 88 341 88 HOH HOH A . E 4 HOH 89 342 89 HOH HOH A . E 4 HOH 90 343 90 HOH HOH A . E 4 HOH 91 344 91 HOH HOH A . E 4 HOH 92 345 92 HOH HOH A . E 4 HOH 93 346 93 HOH HOH A . E 4 HOH 94 347 94 HOH HOH A . E 4 HOH 95 348 95 HOH HOH A . E 4 HOH 96 349 96 HOH HOH A . E 4 HOH 97 350 97 HOH HOH A . E 4 HOH 98 351 98 HOH HOH A . E 4 HOH 99 352 99 HOH HOH A . E 4 HOH 100 353 100 HOH HOH A . E 4 HOH 101 354 101 HOH HOH A . E 4 HOH 102 355 102 HOH HOH A . E 4 HOH 103 356 103 HOH HOH A . E 4 HOH 104 357 104 HOH HOH A . E 4 HOH 105 358 105 HOH HOH A . E 4 HOH 106 359 106 HOH HOH A . E 4 HOH 107 360 107 HOH HOH A . E 4 HOH 108 361 108 HOH HOH A . E 4 HOH 109 362 109 HOH HOH A . E 4 HOH 110 363 110 HOH HOH A . E 4 HOH 111 364 111 HOH HOH A . E 4 HOH 112 365 112 HOH HOH A . E 4 HOH 113 366 113 HOH HOH A . E 4 HOH 114 367 114 HOH HOH A . E 4 HOH 115 368 115 HOH HOH A . E 4 HOH 116 369 116 HOH HOH A . E 4 HOH 117 370 117 HOH HOH A . E 4 HOH 118 371 118 HOH HOH A . E 4 HOH 119 372 119 HOH HOH A . E 4 HOH 120 373 120 HOH HOH A . E 4 HOH 121 374 121 HOH HOH A . E 4 HOH 122 375 122 HOH HOH A . E 4 HOH 123 376 123 HOH HOH A . E 4 HOH 124 377 124 HOH HOH A . E 4 HOH 125 378 125 HOH HOH A . E 4 HOH 126 379 126 HOH HOH A . E 4 HOH 127 380 127 HOH HOH A . E 4 HOH 128 381 128 HOH HOH A . E 4 HOH 129 382 129 HOH HOH A . E 4 HOH 130 383 130 HOH HOH A . E 4 HOH 131 384 131 HOH HOH A . E 4 HOH 132 385 132 HOH HOH A . E 4 HOH 133 386 133 HOH HOH A . E 4 HOH 134 387 134 HOH HOH A . E 4 HOH 135 388 135 HOH HOH A . E 4 HOH 136 389 136 HOH HOH A . E 4 HOH 137 390 137 HOH HOH A . E 4 HOH 138 391 138 HOH HOH A . E 4 HOH 139 392 139 HOH HOH A . E 4 HOH 140 393 140 HOH HOH A . E 4 HOH 141 394 141 HOH HOH A . E 4 HOH 142 395 142 HOH HOH A . E 4 HOH 143 396 143 HOH HOH A . E 4 HOH 144 397 144 HOH HOH A . E 4 HOH 145 398 145 HOH HOH A . E 4 HOH 146 399 146 HOH HOH A . E 4 HOH 147 400 147 HOH HOH A . E 4 HOH 148 401 148 HOH HOH A . E 4 HOH 149 402 149 HOH HOH A . E 4 HOH 150 403 150 HOH HOH A . E 4 HOH 151 404 151 HOH HOH A . E 4 HOH 152 405 152 HOH HOH A . E 4 HOH 153 406 153 HOH HOH A . E 4 HOH 154 407 154 HOH HOH A . E 4 HOH 155 408 155 HOH HOH A . E 4 HOH 156 409 156 HOH HOH A . E 4 HOH 157 410 157 HOH HOH A . E 4 HOH 158 411 158 HOH HOH A . E 4 HOH 159 412 159 HOH HOH A . E 4 HOH 160 413 160 HOH HOH A . E 4 HOH 161 414 161 HOH HOH A . E 4 HOH 162 415 162 HOH HOH A . E 4 HOH 163 416 163 HOH HOH A . E 4 HOH 164 417 164 HOH HOH A . E 4 HOH 165 418 165 HOH HOH A . E 4 HOH 166 419 166 HOH HOH A . E 4 HOH 167 420 167 HOH HOH A . E 4 HOH 168 421 168 HOH HOH A . E 4 HOH 169 422 169 HOH HOH A . E 4 HOH 170 423 170 HOH HOH A . E 4 HOH 171 424 171 HOH HOH A . E 4 HOH 172 425 172 HOH HOH A . E 4 HOH 173 426 173 HOH HOH A . E 4 HOH 174 427 174 HOH HOH A . E 4 HOH 175 428 175 HOH HOH A . E 4 HOH 176 429 176 HOH HOH A . E 4 HOH 177 430 177 HOH HOH A . E 4 HOH 178 431 178 HOH HOH A . E 4 HOH 179 432 179 HOH HOH A . E 4 HOH 180 433 180 HOH HOH A . E 4 HOH 181 434 181 HOH HOH A . E 4 HOH 182 435 182 HOH HOH A . E 4 HOH 183 436 183 HOH HOH A . E 4 HOH 184 437 184 HOH HOH A . E 4 HOH 185 438 185 HOH HOH A . E 4 HOH 186 439 186 HOH HOH A . E 4 HOH 187 440 187 HOH HOH A . E 4 HOH 188 441 188 HOH HOH A . E 4 HOH 189 442 189 HOH HOH A . E 4 HOH 190 443 190 HOH HOH A . E 4 HOH 191 444 191 HOH HOH A . E 4 HOH 192 445 192 HOH HOH A . E 4 HOH 193 446 193 HOH HOH A . E 4 HOH 194 447 194 HOH HOH A . E 4 HOH 195 448 195 HOH HOH A . E 4 HOH 196 449 196 HOH HOH A . E 4 HOH 197 450 197 HOH HOH A . E 4 HOH 198 451 198 HOH HOH A . E 4 HOH 199 452 199 HOH HOH A . E 4 HOH 200 453 200 HOH HOH A . E 4 HOH 201 454 201 HOH HOH A . E 4 HOH 202 455 202 HOH HOH A . E 4 HOH 203 456 203 HOH HOH A . E 4 HOH 204 457 204 HOH HOH A . E 4 HOH 205 458 205 HOH HOH A . E 4 HOH 206 459 206 HOH HOH A . E 4 HOH 207 460 207 HOH HOH A . E 4 HOH 208 461 208 HOH HOH A . E 4 HOH 209 462 209 HOH HOH A . E 4 HOH 210 463 210 HOH HOH A . E 4 HOH 211 464 211 HOH HOH A . E 4 HOH 212 465 212 HOH HOH A . E 4 HOH 213 466 213 HOH HOH A . E 4 HOH 214 467 214 HOH HOH A . E 4 HOH 215 468 215 HOH HOH A . E 4 HOH 216 469 216 HOH HOH A . E 4 HOH 217 470 217 HOH HOH A . E 4 HOH 218 471 218 HOH HOH A . E 4 HOH 219 472 219 HOH HOH A . E 4 HOH 220 473 220 HOH HOH A . E 4 HOH 221 474 221 HOH HOH A . E 4 HOH 222 475 222 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 44 A MSE 41 ? MET SELENOMETHIONINE 2 A MSE 84 A MSE 81 ? MET SELENOMETHIONINE 3 A MSE 127 A MSE 124 ? MET SELENOMETHIONINE 4 A MSE 192 A MSE 189 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-15 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 0.6269 43.4623 81.4372 -0.0139 0.0035 0.0658 0.0352 -0.0385 -0.0467 1.8490 2.6804 2.7259 0.0997 0.0885 0.3828 -0.0449 0.0559 0.3375 -0.1319 -0.1091 0.5282 -0.5110 -0.1753 0.1540 'X-RAY DIFFRACTION' 2 ? refined 18.1141 32.2150 91.1474 -0.0980 -0.0694 -0.0927 -0.0185 -0.0243 -0.0201 0.8721 3.8098 2.0011 -0.9724 -0.1680 -0.2157 -0.0774 -0.0244 0.0404 0.2041 0.0214 -0.1027 -0.0071 0.0715 0.0560 'X-RAY DIFFRACTION' 3 ? refined -0.5692 31.0200 77.0962 -0.1529 -0.0276 -0.0389 0.0095 -0.0310 -0.0962 0.9117 2.0009 2.6228 0.2158 0.3860 0.8975 -0.0042 0.0095 -0.0550 -0.0638 -0.2388 0.4155 0.0296 -0.2114 0.2431 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 2 A 5 A 16 A 19 ? 'X-RAY DIFFRACTION' ? 2 1 A 88 A 91 A 136 A 139 ? 'X-RAY DIFFRACTION' ? 3 2 A 17 A 20 A 87 A 90 ? 'X-RAY DIFFRACTION' ? 4 3 A 137 A 140 A 211 A 214 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 SBC-Collect 'data collection' . ? 2 HKL-3000 'data reduction' . ? 3 HKL-3000 'data scaling' . ? 4 HKL-3000 phasing . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A MSE 124 ? ? O A HOH 475 ? ? 2.14 2 1 OE1 A GLU 72 ? ? O A HOH 470 ? ? 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 PHE _pdbx_validate_rmsd_angle.auth_seq_id_1 129 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PHE _pdbx_validate_rmsd_angle.auth_seq_id_2 129 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PHE _pdbx_validate_rmsd_angle.auth_seq_id_3 129 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 93.06 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation -17.94 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 10 ? ? -102.76 -71.02 2 1 THR A 13 ? ? -120.40 -59.05 3 1 HIS A 123 ? ? -128.63 -72.91 4 1 THR A 186 ? ? -79.99 44.35 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 TRP _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 128 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PHE _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 129 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -96.76 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A MSE 1 ? A MSE 4 5 1 Y 1 A SER 212 ? A SER 215 6 1 Y 1 A VAL 213 ? A VAL 216 7 1 Y 1 A PRO 214 ? A PRO 217 8 1 Y 1 A GLU 215 ? A GLU 218 9 1 Y 1 A ASP 216 ? A ASP 219 10 1 Y 1 A LYS 217 ? A LYS 220 11 1 Y 1 A SER 218 ? A SER 221 12 1 Y 1 A GLY 219 ? A GLY 222 13 1 Y 1 A CYS 220 ? A CYS 223 14 1 Y 1 A PRO 221 ? A PRO 224 15 1 Y 1 A LEU 222 ? A LEU 225 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 GLYCEROL GOL 4 water HOH #