data_3D79 # _entry.id 3D79 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3D79 pdb_00003d79 10.2210/pdb3d79/pdb RCSB RCSB047680 ? ? WWPDB D_1000047680 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_database_2.pdbx_DOI' 11 4 'Structure model' '_database_2.pdbx_database_accession' 12 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 3D79 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-05-20 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nishimura, Y.' 1 'Miyazono, K.' 2 'Sawano, Y.' 3 'Makino, T.' 4 'Nagata, K.' 5 'Tanokura, M.' 6 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein PH0734.1 from hyperthermophilic archaea Pyrococcus horikoshii OT3.' _citation.journal_abbrev Proteins _citation.journal_volume 73 _citation.page_first 1068 _citation.page_last 1071 _citation.year 2008 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18831030 _citation.pdbx_database_id_DOI 10.1002/prot.22231 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Miyazono, K.' 1 ? primary 'Nishimura, Y.' 2 ? primary 'Sawano, Y.' 3 ? primary 'Makino, T.' 4 ? primary 'Tanokura, M.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative uncharacterized protein PH0734' 20453.100 1 ? ? ? ? 2 water nat water 18.015 182 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PUA domain' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMVFRMELKIKHPLSKKDVKEIIAQLSQMFGEEIARKMLNKKDEVKVAEFDKTTEIILVNDKPMFIRRKDLIFPLVIA LYNLSDEEDLRKWPRRVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVEEKYGRPLAIGIALMSGKVMKEKNRG KAVKVIHHARDKIWEVTAR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMVFRMELKIKHPLSKKDVKEIIAQLSQMFGEEIARKMLNKKDEVKVAEFDKTTEIILVNDKPMFIRRKDLIFPLVIA LYNLSDEEDLRKWPRRVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVEEKYGRPLAIGIALMSGKVMKEKNRG KAVKVIHHARDKIWEVTAR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 VAL n 1 6 PHE n 1 7 ARG n 1 8 MET n 1 9 GLU n 1 10 LEU n 1 11 LYS n 1 12 ILE n 1 13 LYS n 1 14 HIS n 1 15 PRO n 1 16 LEU n 1 17 SER n 1 18 LYS n 1 19 LYS n 1 20 ASP n 1 21 VAL n 1 22 LYS n 1 23 GLU n 1 24 ILE n 1 25 ILE n 1 26 ALA n 1 27 GLN n 1 28 LEU n 1 29 SER n 1 30 GLN n 1 31 MET n 1 32 PHE n 1 33 GLY n 1 34 GLU n 1 35 GLU n 1 36 ILE n 1 37 ALA n 1 38 ARG n 1 39 LYS n 1 40 MET n 1 41 LEU n 1 42 ASN n 1 43 LYS n 1 44 LYS n 1 45 ASP n 1 46 GLU n 1 47 VAL n 1 48 LYS n 1 49 VAL n 1 50 ALA n 1 51 GLU n 1 52 PHE n 1 53 ASP n 1 54 LYS n 1 55 THR n 1 56 THR n 1 57 GLU n 1 58 ILE n 1 59 ILE n 1 60 LEU n 1 61 VAL n 1 62 ASN n 1 63 ASP n 1 64 LYS n 1 65 PRO n 1 66 MET n 1 67 PHE n 1 68 ILE n 1 69 ARG n 1 70 ARG n 1 71 LYS n 1 72 ASP n 1 73 LEU n 1 74 ILE n 1 75 PHE n 1 76 PRO n 1 77 LEU n 1 78 VAL n 1 79 ILE n 1 80 ALA n 1 81 LEU n 1 82 TYR n 1 83 ASN n 1 84 LEU n 1 85 SER n 1 86 ASP n 1 87 GLU n 1 88 GLU n 1 89 ASP n 1 90 LEU n 1 91 ARG n 1 92 LYS n 1 93 TRP n 1 94 PRO n 1 95 ARG n 1 96 ARG n 1 97 VAL n 1 98 VAL n 1 99 VAL n 1 100 ASP n 1 101 GLU n 1 102 GLY n 1 103 ALA n 1 104 VAL n 1 105 PRO n 1 106 HIS n 1 107 ILE n 1 108 LEU n 1 109 ASN n 1 110 GLY n 1 111 ALA n 1 112 ASP n 1 113 VAL n 1 114 MET n 1 115 ALA n 1 116 PRO n 1 117 GLY n 1 118 ILE n 1 119 VAL n 1 120 ASP n 1 121 ALA n 1 122 ASP n 1 123 GLU n 1 124 GLY n 1 125 ILE n 1 126 LYS n 1 127 GLU n 1 128 GLY n 1 129 ASP n 1 130 PHE n 1 131 VAL n 1 132 PHE n 1 133 VAL n 1 134 VAL n 1 135 GLU n 1 136 GLU n 1 137 LYS n 1 138 TYR n 1 139 GLY n 1 140 ARG n 1 141 PRO n 1 142 LEU n 1 143 ALA n 1 144 ILE n 1 145 GLY n 1 146 ILE n 1 147 ALA n 1 148 LEU n 1 149 MET n 1 150 SER n 1 151 GLY n 1 152 LYS n 1 153 VAL n 1 154 MET n 1 155 LYS n 1 156 GLU n 1 157 LYS n 1 158 ASN n 1 159 ARG n 1 160 GLY n 1 161 LYS n 1 162 ALA n 1 163 VAL n 1 164 LYS n 1 165 VAL n 1 166 ILE n 1 167 HIS n 1 168 HIS n 1 169 ALA n 1 170 ARG n 1 171 ASP n 1 172 LYS n 1 173 ILE n 1 174 TRP n 1 175 GLU n 1 176 VAL n 1 177 THR n 1 178 ALA n 1 179 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PH0734.1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain OT3 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus horikoshii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 53953 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -6 ? ? ? A . n A 1 2 SER 2 -5 ? ? ? A . n A 1 3 HIS 3 -4 ? ? ? A . n A 1 4 MET 4 -3 ? ? ? A . n A 1 5 VAL 5 -2 ? ? ? A . n A 1 6 PHE 6 -1 ? ? ? A . n A 1 7 ARG 7 0 ? ? ? A . n A 1 8 MET 8 1 ? ? ? A . n A 1 9 GLU 9 2 ? ? ? A . n A 1 10 LEU 10 3 ? ? ? A . n A 1 11 LYS 11 4 ? ? ? A . n A 1 12 ILE 12 5 5 ILE ILE A . n A 1 13 LYS 13 6 6 LYS LYS A . n A 1 14 HIS 14 7 7 HIS HIS A . n A 1 15 PRO 15 8 8 PRO PRO A . n A 1 16 LEU 16 9 9 LEU LEU A . n A 1 17 SER 17 10 10 SER SER A . n A 1 18 LYS 18 11 11 LYS LYS A . n A 1 19 LYS 19 12 12 LYS LYS A . n A 1 20 ASP 20 13 13 ASP ASP A . n A 1 21 VAL 21 14 14 VAL VAL A . n A 1 22 LYS 22 15 15 LYS LYS A . n A 1 23 GLU 23 16 16 GLU GLU A . n A 1 24 ILE 24 17 17 ILE ILE A . n A 1 25 ILE 25 18 18 ILE ILE A . n A 1 26 ALA 26 19 19 ALA ALA A . n A 1 27 GLN 27 20 20 GLN GLN A . n A 1 28 LEU 28 21 21 LEU LEU A . n A 1 29 SER 29 22 22 SER SER A . n A 1 30 GLN 30 23 23 GLN GLN A . n A 1 31 MET 31 24 24 MET MET A . n A 1 32 PHE 32 25 25 PHE PHE A . n A 1 33 GLY 33 26 26 GLY GLY A . n A 1 34 GLU 34 27 27 GLU GLU A . n A 1 35 GLU 35 28 28 GLU GLU A . n A 1 36 ILE 36 29 29 ILE ILE A . n A 1 37 ALA 37 30 30 ALA ALA A . n A 1 38 ARG 38 31 31 ARG ARG A . n A 1 39 LYS 39 32 32 LYS LYS A . n A 1 40 MET 40 33 33 MET MET A . n A 1 41 LEU 41 34 34 LEU LEU A . n A 1 42 ASN 42 35 35 ASN ASN A . n A 1 43 LYS 43 36 36 LYS LYS A . n A 1 44 LYS 44 37 37 LYS LYS A . n A 1 45 ASP 45 38 38 ASP ASP A . n A 1 46 GLU 46 39 39 GLU GLU A . n A 1 47 VAL 47 40 40 VAL VAL A . n A 1 48 LYS 48 41 41 LYS LYS A . n A 1 49 VAL 49 42 42 VAL VAL A . n A 1 50 ALA 50 43 43 ALA ALA A . n A 1 51 GLU 51 44 44 GLU GLU A . n A 1 52 PHE 52 45 45 PHE PHE A . n A 1 53 ASP 53 46 46 ASP ASP A . n A 1 54 LYS 54 47 47 LYS LYS A . n A 1 55 THR 55 48 48 THR THR A . n A 1 56 THR 56 49 49 THR THR A . n A 1 57 GLU 57 50 50 GLU GLU A . n A 1 58 ILE 58 51 51 ILE ILE A . n A 1 59 ILE 59 52 52 ILE ILE A . n A 1 60 LEU 60 53 53 LEU LEU A . n A 1 61 VAL 61 54 54 VAL VAL A . n A 1 62 ASN 62 55 55 ASN ASN A . n A 1 63 ASP 63 56 56 ASP ASP A . n A 1 64 LYS 64 57 57 LYS LYS A . n A 1 65 PRO 65 58 58 PRO PRO A . n A 1 66 MET 66 59 59 MET MET A . n A 1 67 PHE 67 60 60 PHE PHE A . n A 1 68 ILE 68 61 61 ILE ILE A . n A 1 69 ARG 69 62 62 ARG ARG A . n A 1 70 ARG 70 63 63 ARG ARG A . n A 1 71 LYS 71 64 64 LYS LYS A . n A 1 72 ASP 72 65 65 ASP ASP A . n A 1 73 LEU 73 66 66 LEU LEU A . n A 1 74 ILE 74 67 67 ILE ILE A . n A 1 75 PHE 75 68 68 PHE PHE A . n A 1 76 PRO 76 69 69 PRO PRO A . n A 1 77 LEU 77 70 70 LEU LEU A . n A 1 78 VAL 78 71 71 VAL VAL A . n A 1 79 ILE 79 72 72 ILE ILE A . n A 1 80 ALA 80 73 73 ALA ALA A . n A 1 81 LEU 81 74 74 LEU LEU A . n A 1 82 TYR 82 75 75 TYR TYR A . n A 1 83 ASN 83 76 76 ASN ASN A . n A 1 84 LEU 84 77 77 LEU LEU A . n A 1 85 SER 85 78 78 SER SER A . n A 1 86 ASP 86 79 79 ASP ASP A . n A 1 87 GLU 87 80 80 GLU GLU A . n A 1 88 GLU 88 81 81 GLU GLU A . n A 1 89 ASP 89 82 82 ASP ASP A . n A 1 90 LEU 90 83 83 LEU LEU A . n A 1 91 ARG 91 84 84 ARG ARG A . n A 1 92 LYS 92 85 85 LYS LYS A . n A 1 93 TRP 93 86 86 TRP TRP A . n A 1 94 PRO 94 87 87 PRO PRO A . n A 1 95 ARG 95 88 88 ARG ARG A . n A 1 96 ARG 96 89 89 ARG ARG A . n A 1 97 VAL 97 90 90 VAL VAL A . n A 1 98 VAL 98 91 91 VAL VAL A . n A 1 99 VAL 99 92 92 VAL VAL A . n A 1 100 ASP 100 93 93 ASP ASP A . n A 1 101 GLU 101 94 94 GLU GLU A . n A 1 102 GLY 102 95 95 GLY GLY A . n A 1 103 ALA 103 96 96 ALA ALA A . n A 1 104 VAL 104 97 97 VAL VAL A . n A 1 105 PRO 105 98 98 PRO PRO A . n A 1 106 HIS 106 99 99 HIS HIS A . n A 1 107 ILE 107 100 100 ILE ILE A . n A 1 108 LEU 108 101 101 LEU LEU A . n A 1 109 ASN 109 102 102 ASN ASN A . n A 1 110 GLY 110 103 103 GLY GLY A . n A 1 111 ALA 111 104 104 ALA ALA A . n A 1 112 ASP 112 105 105 ASP ASP A . n A 1 113 VAL 113 106 106 VAL VAL A . n A 1 114 MET 114 107 107 MET MET A . n A 1 115 ALA 115 108 108 ALA ALA A . n A 1 116 PRO 116 109 109 PRO PRO A . n A 1 117 GLY 117 110 110 GLY GLY A . n A 1 118 ILE 118 111 111 ILE ILE A . n A 1 119 VAL 119 112 112 VAL VAL A . n A 1 120 ASP 120 113 113 ASP ASP A . n A 1 121 ALA 121 114 114 ALA ALA A . n A 1 122 ASP 122 115 115 ASP ASP A . n A 1 123 GLU 123 116 116 GLU GLU A . n A 1 124 GLY 124 117 117 GLY GLY A . n A 1 125 ILE 125 118 118 ILE ILE A . n A 1 126 LYS 126 119 119 LYS LYS A . n A 1 127 GLU 127 120 120 GLU GLU A . n A 1 128 GLY 128 121 121 GLY GLY A . n A 1 129 ASP 129 122 122 ASP ASP A . n A 1 130 PHE 130 123 123 PHE PHE A . n A 1 131 VAL 131 124 124 VAL VAL A . n A 1 132 PHE 132 125 125 PHE PHE A . n A 1 133 VAL 133 126 126 VAL VAL A . n A 1 134 VAL 134 127 127 VAL VAL A . n A 1 135 GLU 135 128 128 GLU GLU A . n A 1 136 GLU 136 129 129 GLU GLU A . n A 1 137 LYS 137 130 130 LYS LYS A . n A 1 138 TYR 138 131 131 TYR TYR A . n A 1 139 GLY 139 132 132 GLY GLY A . n A 1 140 ARG 140 133 133 ARG ARG A . n A 1 141 PRO 141 134 134 PRO PRO A . n A 1 142 LEU 142 135 135 LEU LEU A . n A 1 143 ALA 143 136 136 ALA ALA A . n A 1 144 ILE 144 137 137 ILE ILE A . n A 1 145 GLY 145 138 138 GLY GLY A . n A 1 146 ILE 146 139 139 ILE ILE A . n A 1 147 ALA 147 140 140 ALA ALA A . n A 1 148 LEU 148 141 141 LEU LEU A . n A 1 149 MET 149 142 142 MET MET A . n A 1 150 SER 150 143 143 SER SER A . n A 1 151 GLY 151 144 144 GLY GLY A . n A 1 152 LYS 152 145 145 LYS LYS A . n A 1 153 VAL 153 146 146 VAL VAL A . n A 1 154 MET 154 147 147 MET MET A . n A 1 155 LYS 155 148 148 LYS LYS A . n A 1 156 GLU 156 149 149 GLU GLU A . n A 1 157 LYS 157 150 150 LYS LYS A . n A 1 158 ASN 158 151 151 ASN ASN A . n A 1 159 ARG 159 152 152 ARG ARG A . n A 1 160 GLY 160 153 153 GLY GLY A . n A 1 161 LYS 161 154 154 LYS LYS A . n A 1 162 ALA 162 155 155 ALA ALA A . n A 1 163 VAL 163 156 156 VAL VAL A . n A 1 164 LYS 164 157 157 LYS LYS A . n A 1 165 VAL 165 158 158 VAL VAL A . n A 1 166 ILE 166 159 159 ILE ILE A . n A 1 167 HIS 167 160 160 HIS HIS A . n A 1 168 HIS 168 161 161 HIS HIS A . n A 1 169 ALA 169 162 162 ALA ALA A . n A 1 170 ARG 170 163 163 ARG ARG A . n A 1 171 ASP 171 164 164 ASP ASP A . n A 1 172 LYS 172 165 165 LYS LYS A . n A 1 173 ILE 173 166 166 ILE ILE A . n A 1 174 TRP 174 167 167 TRP TRP A . n A 1 175 GLU 175 168 168 GLU GLU A . n A 1 176 VAL 176 169 169 VAL VAL A . n A 1 177 THR 177 170 170 THR THR A . n A 1 178 ALA 178 171 171 ALA ALA A . n A 1 179 ARG 179 172 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 173 1 HOH HOH A . B 2 HOH 2 174 2 HOH HOH A . B 2 HOH 3 175 3 HOH HOH A . B 2 HOH 4 176 4 HOH HOH A . B 2 HOH 5 177 5 HOH HOH A . B 2 HOH 6 178 6 HOH HOH A . B 2 HOH 7 179 7 HOH HOH A . B 2 HOH 8 180 8 HOH HOH A . B 2 HOH 9 181 9 HOH HOH A . B 2 HOH 10 182 10 HOH HOH A . B 2 HOH 11 183 11 HOH HOH A . B 2 HOH 12 184 12 HOH HOH A . B 2 HOH 13 185 13 HOH HOH A . B 2 HOH 14 186 14 HOH HOH A . B 2 HOH 15 187 15 HOH HOH A . B 2 HOH 16 188 16 HOH HOH A . B 2 HOH 17 189 17 HOH HOH A . B 2 HOH 18 190 18 HOH HOH A . B 2 HOH 19 191 19 HOH HOH A . B 2 HOH 20 192 20 HOH HOH A . B 2 HOH 21 193 21 HOH HOH A . B 2 HOH 22 194 22 HOH HOH A . B 2 HOH 23 195 23 HOH HOH A . B 2 HOH 24 196 24 HOH HOH A . B 2 HOH 25 197 25 HOH HOH A . B 2 HOH 26 198 26 HOH HOH A . B 2 HOH 27 199 27 HOH HOH A . B 2 HOH 28 200 28 HOH HOH A . B 2 HOH 29 201 29 HOH HOH A . B 2 HOH 30 202 30 HOH HOH A . B 2 HOH 31 203 31 HOH HOH A . B 2 HOH 32 204 32 HOH HOH A . B 2 HOH 33 205 33 HOH HOH A . B 2 HOH 34 206 34 HOH HOH A . B 2 HOH 35 207 35 HOH HOH A . B 2 HOH 36 208 36 HOH HOH A . B 2 HOH 37 209 37 HOH HOH A . B 2 HOH 38 210 38 HOH HOH A . B 2 HOH 39 211 39 HOH HOH A . B 2 HOH 40 212 40 HOH HOH A . B 2 HOH 41 213 41 HOH HOH A . B 2 HOH 42 214 42 HOH HOH A . B 2 HOH 43 215 43 HOH HOH A . B 2 HOH 44 216 44 HOH HOH A . B 2 HOH 45 217 45 HOH HOH A . B 2 HOH 46 218 46 HOH HOH A . B 2 HOH 47 219 47 HOH HOH A . B 2 HOH 48 220 48 HOH HOH A . B 2 HOH 49 221 49 HOH HOH A . B 2 HOH 50 222 50 HOH HOH A . B 2 HOH 51 223 51 HOH HOH A . B 2 HOH 52 224 52 HOH HOH A . B 2 HOH 53 225 53 HOH HOH A . B 2 HOH 54 226 54 HOH HOH A . B 2 HOH 55 227 55 HOH HOH A . B 2 HOH 56 228 56 HOH HOH A . B 2 HOH 57 229 57 HOH HOH A . B 2 HOH 58 230 58 HOH HOH A . B 2 HOH 59 231 59 HOH HOH A . B 2 HOH 60 232 60 HOH HOH A . B 2 HOH 61 233 61 HOH HOH A . B 2 HOH 62 234 62 HOH HOH A . B 2 HOH 63 235 63 HOH HOH A . B 2 HOH 64 236 64 HOH HOH A . B 2 HOH 65 237 65 HOH HOH A . B 2 HOH 66 238 66 HOH HOH A . B 2 HOH 67 239 67 HOH HOH A . B 2 HOH 68 240 68 HOH HOH A . B 2 HOH 69 241 69 HOH HOH A . B 2 HOH 70 242 70 HOH HOH A . B 2 HOH 71 243 71 HOH HOH A . B 2 HOH 72 244 72 HOH HOH A . B 2 HOH 73 245 73 HOH HOH A . B 2 HOH 74 246 74 HOH HOH A . B 2 HOH 75 247 75 HOH HOH A . B 2 HOH 76 248 76 HOH HOH A . B 2 HOH 77 249 77 HOH HOH A . B 2 HOH 78 250 78 HOH HOH A . B 2 HOH 79 251 79 HOH HOH A . B 2 HOH 80 252 80 HOH HOH A . B 2 HOH 81 253 81 HOH HOH A . B 2 HOH 82 254 82 HOH HOH A . B 2 HOH 83 255 83 HOH HOH A . B 2 HOH 84 256 84 HOH HOH A . B 2 HOH 85 257 85 HOH HOH A . B 2 HOH 86 258 86 HOH HOH A . B 2 HOH 87 259 87 HOH HOH A . B 2 HOH 88 260 88 HOH HOH A . B 2 HOH 89 261 89 HOH HOH A . B 2 HOH 90 262 90 HOH HOH A . B 2 HOH 91 263 91 HOH HOH A . B 2 HOH 92 264 92 HOH HOH A . B 2 HOH 93 265 93 HOH HOH A . B 2 HOH 94 266 94 HOH HOH A . B 2 HOH 95 267 95 HOH HOH A . B 2 HOH 96 268 96 HOH HOH A . B 2 HOH 97 269 97 HOH HOH A . B 2 HOH 98 270 98 HOH HOH A . B 2 HOH 99 271 99 HOH HOH A . B 2 HOH 100 272 100 HOH HOH A . B 2 HOH 101 273 101 HOH HOH A . B 2 HOH 102 274 102 HOH HOH A . B 2 HOH 103 275 103 HOH HOH A . B 2 HOH 104 276 104 HOH HOH A . B 2 HOH 105 277 105 HOH HOH A . B 2 HOH 106 278 106 HOH HOH A . B 2 HOH 107 279 107 HOH HOH A . B 2 HOH 108 280 108 HOH HOH A . B 2 HOH 109 281 109 HOH HOH A . B 2 HOH 110 282 110 HOH HOH A . B 2 HOH 111 283 111 HOH HOH A . B 2 HOH 112 284 112 HOH HOH A . B 2 HOH 113 285 113 HOH HOH A . B 2 HOH 114 286 114 HOH HOH A . B 2 HOH 115 287 115 HOH HOH A . B 2 HOH 116 288 116 HOH HOH A . B 2 HOH 117 289 117 HOH HOH A . B 2 HOH 118 290 118 HOH HOH A . B 2 HOH 119 291 119 HOH HOH A . B 2 HOH 120 292 120 HOH HOH A . B 2 HOH 121 293 121 HOH HOH A . B 2 HOH 122 294 122 HOH HOH A . B 2 HOH 123 295 123 HOH HOH A . B 2 HOH 124 296 124 HOH HOH A . B 2 HOH 125 297 125 HOH HOH A . B 2 HOH 126 298 126 HOH HOH A . B 2 HOH 127 299 127 HOH HOH A . B 2 HOH 128 300 128 HOH HOH A . B 2 HOH 129 301 129 HOH HOH A . B 2 HOH 130 302 130 HOH HOH A . B 2 HOH 131 303 131 HOH HOH A . B 2 HOH 132 304 132 HOH HOH A . B 2 HOH 133 305 133 HOH HOH A . B 2 HOH 134 306 134 HOH HOH A . B 2 HOH 135 307 135 HOH HOH A . B 2 HOH 136 308 136 HOH HOH A . B 2 HOH 137 309 137 HOH HOH A . B 2 HOH 138 310 138 HOH HOH A . B 2 HOH 139 311 139 HOH HOH A . B 2 HOH 140 312 140 HOH HOH A . B 2 HOH 141 313 141 HOH HOH A . B 2 HOH 142 314 142 HOH HOH A . B 2 HOH 143 315 143 HOH HOH A . B 2 HOH 144 316 144 HOH HOH A . B 2 HOH 145 317 145 HOH HOH A . B 2 HOH 146 318 146 HOH HOH A . B 2 HOH 147 319 147 HOH HOH A . B 2 HOH 148 320 148 HOH HOH A . B 2 HOH 149 321 149 HOH HOH A . B 2 HOH 150 322 150 HOH HOH A . B 2 HOH 151 323 151 HOH HOH A . B 2 HOH 152 324 152 HOH HOH A . B 2 HOH 153 325 153 HOH HOH A . B 2 HOH 154 326 154 HOH HOH A . B 2 HOH 155 327 155 HOH HOH A . B 2 HOH 156 328 156 HOH HOH A . B 2 HOH 157 329 157 HOH HOH A . B 2 HOH 158 330 158 HOH HOH A . B 2 HOH 159 331 159 HOH HOH A . B 2 HOH 160 332 160 HOH HOH A . B 2 HOH 161 333 161 HOH HOH A . B 2 HOH 162 334 162 HOH HOH A . B 2 HOH 163 335 163 HOH HOH A . B 2 HOH 164 336 164 HOH HOH A . B 2 HOH 165 337 165 HOH HOH A . B 2 HOH 166 338 166 HOH HOH A . B 2 HOH 167 339 167 HOH HOH A . B 2 HOH 168 340 168 HOH HOH A . B 2 HOH 169 341 169 HOH HOH A . B 2 HOH 170 342 170 HOH HOH A . B 2 HOH 171 343 171 HOH HOH A . B 2 HOH 172 344 172 HOH HOH A . B 2 HOH 173 345 173 HOH HOH A . B 2 HOH 174 346 174 HOH HOH A . B 2 HOH 175 347 175 HOH HOH A . B 2 HOH 176 348 176 HOH HOH A . B 2 HOH 177 349 177 HOH HOH A . B 2 HOH 178 350 178 HOH HOH A . B 2 HOH 179 351 179 HOH HOH A . B 2 HOH 180 352 180 HOH HOH A . B 2 HOH 181 353 181 HOH HOH A . B 2 HOH 182 354 182 HOH HOH A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 MOLREP . ? other 'A. Vagin' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC refmac_5.2.0019 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 # _cell.length_a 52.921 _cell.length_b 52.921 _cell.length_c 133.313 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3D79 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 3D79 _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3D79 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.63 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 53.32 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A # _reflns.entry_id 3D79 _reflns.d_resolution_high 1.730 _reflns.d_resolution_low 25.000 _reflns.number_obs 23373 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_netI_over_sigmaI 21.300 _reflns.pdbx_chi_squared 2.392 _reflns.pdbx_redundancy 18.800 _reflns.percent_possible_obs 99.800 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.73 1.79 ? ? ? 0.221 ? ? 0.874 19.00 ? 2279 100.00 ? 1 1.79 1.86 ? ? ? 0.171 ? ? 0.993 18.80 ? 2304 100.00 ? 2 1.86 1.95 ? ? ? 0.128 ? ? 1.221 18.80 ? 2297 100.00 ? 3 1.95 2.05 ? ? ? 0.105 ? ? 1.505 18.70 ? 2310 100.00 ? 4 2.05 2.18 ? ? ? 0.086 ? ? 1.964 18.60 ? 2296 100.00 ? 5 2.18 2.35 ? ? ? 0.075 ? ? 2.264 18.60 ? 2315 100.00 ? 6 2.35 2.58 ? ? ? 0.070 ? ? 2.628 18.80 ? 2337 100.00 ? 7 2.58 2.96 ? ? ? 0.065 ? ? 3.286 19.00 ? 2355 100.00 ? 8 2.96 3.72 ? ? ? 0.058 ? ? 4.262 19.10 ? 2376 99.80 ? 9 3.72 25.00 ? ? ? 0.055 ? ? 4.642 18.40 ? 2504 98.70 ? 10 # _refine.entry_id 3D79 _refine.ls_d_res_high 1.730 _refine.ls_d_res_low 25.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.860 _refine.ls_number_reflns_obs 23327 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_obs 0.209 _refine.ls_R_factor_R_work 0.207 _refine.ls_R_factor_R_free 0.229 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1198 _refine.B_iso_mean 21.207 _refine.aniso_B[1][1] 0.070 _refine.aniso_B[2][2] 0.070 _refine.aniso_B[3][3] -0.100 _refine.aniso_B[1][2] 0.030 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.pdbx_overall_ESU_R 0.112 _refine.pdbx_overall_ESU_R_Free 0.106 _refine.overall_SU_ML 0.067 _refine.overall_SU_B 1.993 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1331 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 182 _refine_hist.number_atoms_total 1513 _refine_hist.d_res_high 1.730 _refine_hist.d_res_low 25.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1353 0.007 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1818 1.126 1.978 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 166 5.565 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 58 32.135 24.483 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 272 12.371 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 11.400 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 206 0.083 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 979 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 654 0.193 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 946 0.301 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 151 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 26 0.145 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 21 0.073 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 858 0.620 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1348 1.086 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 551 1.612 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 470 2.662 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.730 _refine_ls_shell.d_res_low 1.775 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.940 _refine_ls_shell.number_reflns_R_work 1596 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.235 _refine_ls_shell.R_factor_R_free 0.345 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 90 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1686 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3D79 _struct.title 'Crystal structure of hypothetical protein PH0734.1 from hyperthermophilic archaea Pyrococcus horikoshii OT3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3D79 _struct_keywords.text 'PUA, UNKNOWN FUNCTION' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O58465_PYRHO _struct_ref.pdbx_db_accession O58465 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FRMELKIKHPLSKKDVKEIIAQLSQMFGEEIARKMLNKKDEVKVAEFDKTTEIILVNDKPMFIRRKDLIFPLVIALYNLS DEEDLRKWPRRVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVEEKYGRPLAIGIALMSGKVMKEKNRGKAVKV IHHARDKIWEVTAR ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3D79 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 179 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O58465 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 175 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -1 _struct_ref_seq.pdbx_auth_seq_align_end 172 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3D79 GLY A 1 ? UNP O58465 ? ? 'expression tag' -6 1 1 3D79 SER A 2 ? UNP O58465 ? ? 'expression tag' -5 2 1 3D79 HIS A 3 ? UNP O58465 ? ? 'expression tag' -4 3 1 3D79 MET A 4 ? UNP O58465 ? ? 'expression tag' -3 4 1 3D79 VAL A 5 ? UNP O58465 ? ? 'expression tag' -2 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 17 ? GLY A 33 ? SER A 10 GLY A 26 1 ? 17 HELX_P HELX_P2 2 GLY A 33 ? LEU A 41 ? GLY A 26 LEU A 34 1 ? 9 HELX_P HELX_P3 3 LEU A 77 ? SER A 85 ? LEU A 70 SER A 78 1 ? 9 HELX_P HELX_P4 4 ASP A 89 ? TRP A 93 ? ASP A 82 TRP A 86 5 ? 5 HELX_P HELX_P5 5 ALA A 103 ? ASN A 109 ? ALA A 96 ASN A 102 1 ? 7 HELX_P HELX_P6 6 SER A 150 ? LYS A 157 ? SER A 143 LYS A 150 1 ? 8 HELX_P HELX_P7 7 ASP A 171 ? ALA A 178 ? ASP A 164 ALA A 171 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 14 ? PRO A 15 ? HIS A 7 PRO A 8 A 2 VAL A 47 ? ASP A 53 ? VAL A 40 ASP A 46 A 3 THR A 56 ? VAL A 61 ? THR A 49 VAL A 54 A 4 LYS A 64 ? ARG A 70 ? LYS A 57 ARG A 63 A 5 LEU A 73 ? PRO A 76 ? LEU A 66 PRO A 69 B 1 VAL A 113 ? MET A 114 ? VAL A 106 MET A 107 B 2 LYS A 161 ? HIS A 168 ? LYS A 154 HIS A 161 B 3 PRO A 141 ? ALA A 147 ? PRO A 134 ALA A 140 B 4 PHE A 130 ? GLU A 135 ? PHE A 123 GLU A 128 B 5 ARG A 96 ? VAL A 99 ? ARG A 89 VAL A 92 B 6 ILE A 118 ? ALA A 121 ? ILE A 111 ALA A 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 14 ? N HIS A 7 O VAL A 49 ? O VAL A 42 A 2 3 N ALA A 50 ? N ALA A 43 O ILE A 58 ? O ILE A 51 A 3 4 N ILE A 59 ? N ILE A 52 O PHE A 67 ? O PHE A 60 A 4 5 N ILE A 68 ? N ILE A 61 O PHE A 75 ? O PHE A 68 B 1 2 N VAL A 113 ? N VAL A 106 O ALA A 162 ? O ALA A 155 B 2 3 O HIS A 167 ? O HIS A 160 N ILE A 144 ? N ILE A 137 B 3 4 O LEU A 142 ? O LEU A 135 N VAL A 133 ? N VAL A 126 B 4 5 O VAL A 134 ? O VAL A 127 N VAL A 97 ? N VAL A 90 B 5 6 N VAL A 98 ? N VAL A 91 O ASP A 120 ? O ASP A 113 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 64 ? ? 51.71 -104.41 2 1 LYS A 130 ? ? -83.45 -74.08 3 1 ARG A 163 ? ? 82.99 -5.65 # _pdbx_phasing_MR.entry_id 3D79 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.750 _pdbx_phasing_MR.d_res_low_rotation 23.050 _pdbx_phasing_MR.d_res_high_translation 1.750 _pdbx_phasing_MR.d_res_low_translation 23.050 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -6 ? A GLY 1 2 1 Y 1 A SER -5 ? A SER 2 3 1 Y 1 A HIS -4 ? A HIS 3 4 1 Y 1 A MET -3 ? A MET 4 5 1 Y 1 A VAL -2 ? A VAL 5 6 1 Y 1 A PHE -1 ? A PHE 6 7 1 Y 1 A ARG 0 ? A ARG 7 8 1 Y 1 A MET 1 ? A MET 8 9 1 Y 1 A GLU 2 ? A GLU 9 10 1 Y 1 A LEU 3 ? A LEU 10 11 1 Y 1 A LYS 4 ? A LYS 11 12 1 Y 1 A ARG 172 ? A ARG 179 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 3D79 _atom_sites.fract_transf_matrix[1][1] 0.018896 _atom_sites.fract_transf_matrix[1][2] 0.010910 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021819 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007501 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_