HEADER ELECTRON TRANSPORT 22-MAY-08 3D89 TITLE CRYSTAL STRUCTURE OF A SOLUBLE RIESKE FERREDOXIN FROM MUS MUSCULUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIESKE DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RFESD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PVP 16 KEYWDS CASP TARGET, RIESKE FERREDOXIN, [2FE-2S] CLUSTER, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, PSI, CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS, CESG, KEYWDS 3 IRON, IRON-SULFUR, METAL-BINDING, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR E.J.LEVIN,J.G.MCCOY,N.L.ELSEN,K.D.SEDER,C.A.BINGMAN,G.E.WESENBERG, AUTHOR 2 B.G.FOX,G.N.PHILLIPS JR.,CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS AUTHOR 3 (CESG) REVDAT 7 21-FEB-24 3D89 1 REMARK REVDAT 6 25-OCT-17 3D89 1 REMARK REVDAT 5 13-JUL-11 3D89 1 VERSN REVDAT 4 23-JUN-09 3D89 1 REMARK REVDAT 3 24-FEB-09 3D89 1 VERSN REVDAT 2 21-OCT-08 3D89 1 JRNL REVDAT 1 15-JUL-08 3D89 0 JRNL AUTH E.J.LEVIN,N.L.ELSEN,K.D.SEDER,J.G.MCCOY,B.G.FOX,G.N.PHILLIPS JRNL TITL X-RAY STRUCTURE OF A SOLUBLE RIESKE-TYPE FERREDOXIN FROM MUS JRNL TITL 2 MUSCULUS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 64 933 2008 JRNL REFN ISSN 0907-4449 JRNL PMID 18703841 JRNL DOI 10.1107/S0907444908021653 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 9754 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.839 REMARK 3 FREE R VALUE TEST SET COUNT : 472 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 643 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2950 REMARK 3 BIN FREE R VALUE SET COUNT : 24 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1099 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14800 REMARK 3 B22 (A**2) : 0.14800 REMARK 3 B33 (A**2) : -0.29500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.213 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.171 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.655 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1159 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1563 ; 1.848 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 140 ; 6.528 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;35.566 ;23.571 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 206 ;15.863 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;14.000 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 162 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 881 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 453 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 757 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 60 ; 0.128 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 36 ; 0.235 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.168 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 706 ; 1.018 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1114 ; 1.486 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 523 ; 2.169 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 445 ; 3.120 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 18 REMARK 3 ORIGIN FOR THE GROUP (A): 17.1736 -23.3367 -5.3402 REMARK 3 T TENSOR REMARK 3 T11: 0.4111 T22: 0.6839 REMARK 3 T33: 0.3936 T12: 0.0919 REMARK 3 T13: 0.1234 T23: -0.2583 REMARK 3 L TENSOR REMARK 3 L11: 80.9735 L22: 87.7722 REMARK 3 L33: 14.0627 L12: -41.3260 REMARK 3 L13: 12.4217 L23: -26.1380 REMARK 3 S TENSOR REMARK 3 S11: 0.6205 S12: 0.6405 S13: -4.5263 REMARK 3 S21: -3.7394 S22: -0.4616 S23: -1.6532 REMARK 3 S31: 3.0492 S32: 0.9092 S33: -0.1589 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 35 REMARK 3 ORIGIN FOR THE GROUP (A): 6.4897 -8.4335 0.8772 REMARK 3 T TENSOR REMARK 3 T11: -0.2298 T22: 0.5332 REMARK 3 T33: 0.0196 T12: 0.0121 REMARK 3 T13: -0.0642 T23: 0.2340 REMARK 3 L TENSOR REMARK 3 L11: 7.2760 L22: 7.9249 REMARK 3 L33: 12.2897 L12: 1.6286 REMARK 3 L13: 0.9643 L23: -1.5685 REMARK 3 S TENSOR REMARK 3 S11: -0.1296 S12: 1.6702 S13: 0.9406 REMARK 3 S21: -0.2123 S22: 0.2343 S23: 0.9811 REMARK 3 S31: -0.9165 S32: -0.3876 S33: -0.1047 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 36 A 133 REMARK 3 ORIGIN FOR THE GROUP (A): 17.5359 -11.3666 12.7765 REMARK 3 T TENSOR REMARK 3 T11: -0.0684 T22: 0.2038 REMARK 3 T33: 0.0899 T12: 0.0060 REMARK 3 T13: 0.0370 T23: 0.0561 REMARK 3 L TENSOR REMARK 3 L11: 5.7093 L22: 1.8466 REMARK 3 L33: 7.1449 L12: 0.1327 REMARK 3 L13: 0.4382 L23: 0.6457 REMARK 3 S TENSOR REMARK 3 S11: -0.0370 S12: 0.6010 S13: 0.2396 REMARK 3 S21: -0.0056 S22: 0.0725 S23: 0.0034 REMARK 3 S31: -0.2429 S32: 0.3816 S33: -0.0355 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 134 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): 18.5100 -25.3724 13.4182 REMARK 3 T TENSOR REMARK 3 T11: 0.2565 T22: 0.0153 REMARK 3 T33: 0.2150 T12: 0.1697 REMARK 3 T13: -0.0118 T23: -0.0801 REMARK 3 L TENSOR REMARK 3 L11: 9.3456 L22: 5.9282 REMARK 3 L33: 20.0657 L12: 3.5648 REMARK 3 L13: -4.2381 L23: -2.8478 REMARK 3 S TENSOR REMARK 3 S11: -0.2016 S12: 0.8653 S13: -1.2974 REMARK 3 S21: -0.4175 S22: 0.0954 S23: -0.0159 REMARK 3 S31: 2.3431 S32: 0.4918 S33: 0.1062 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3D89 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000047716. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-07; 11-JUN-07 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 23-ID-B; 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96419; 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111); ROSENBAUM-ROCK REMARK 200 MONOCHROMATOR HIGH-RESOLUTION REMARK 200 DOUBLE-CRYSTAL SI (111) SAGITTAL REMARK 200 FOCUSING, WATER COOLED REMARK 200 OPTICS : ADJUSTABLE FOCUS K-B PAIR SI REMARK 200 PLUS PT, RH COATINGS; ROSENBAUM- REMARK 200 ROCK VERTICAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD; MARMOSAIC REMARK 200 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9806 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3540 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.62100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.845 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP, DM 5.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION (~15 MG/ML NATIVE REMARK 280 PROTEIN, 0.025 M NACL, 0.005 M MOPS PH 7.0) MIXED IN A 1:1 RATIO REMARK 280 WITH WELL SOLUTION ( 25% MEPEG 5K, 0.12 M TRISODIUM CITRATE, REMARK 280 0.10 M MES PH 6.0) CRYOPROTECTED WITH 15% ETHYLENE GLYCOL; REMARK 280 MERCURY DERIVATIVE CRYSTAL SOAKED OVERNIGHT IN IN MOTHER LIQUOR REMARK 280 CONTAINING 0.002 M THIMERSOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.40400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 26.20650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 26.20650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.60600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 26.20650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 26.20650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.20200 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 26.20650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.20650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 81.60600 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 26.20650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.20650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 27.20200 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 54.40400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT GEL-FILTRATION DATA HAS SHOWN THAT IN REMARK 300 SOLUTION THE PROTEIN IS A MONOMER AND THE PISA CALCULATED REMARK 300 ASYMMETRIC DIMER IS ELIEVED TO BE AN ARTIFACT OF THE LATTICE REMARK 300 PACKING. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ASP A 2 REMARK 465 PRO A 3 REMARK 465 GLU A 4 REMARK 465 ILE A 5 REMARK 465 SER A 6 REMARK 465 GLU A 7 REMARK 465 GLN A 8 REMARK 465 ASP A 9 REMARK 465 GLU A 10 REMARK 465 GLU A 11 REMARK 465 LYS A 12 REMARK 465 LYS A 13 REMARK 465 LYS A 102 REMARK 465 ASP A 103 REMARK 465 PRO A 104 REMARK 465 SER A 105 REMARK 465 ALA A 106 REMARK 465 SER A 155 REMARK 465 SER A 156 REMARK 465 SER A 157 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 138 CG PHE A 138 CD2 0.109 REMARK 500 PHE A 138 CG PHE A 138 CD1 0.144 REMARK 500 PHE A 138 CE1 PHE A 138 CZ 0.135 REMARK 500 PHE A 138 CZ PHE A 138 CE2 0.150 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 17 130.60 -35.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 201 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 57 SG REMARK 620 2 FES A 201 S1 107.7 REMARK 620 3 FES A 201 S2 113.5 102.8 REMARK 620 4 CYS A 80 SG 108.0 113.9 110.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 201 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 59 ND1 REMARK 620 2 FES A 201 S1 120.1 REMARK 620 3 FES A 201 S2 108.5 103.0 REMARK 620 4 HIS A 83 ND1 95.9 112.4 117.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.35879 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS STRUCTURE WAS SUBMITTED AS CASP8 ID T0391. DBREF 3D89 A 2 157 UNP Q8K2P6 RFESD_MOUSE 2 157 SEQADV 3D89 SER A 1 UNP Q8K2P6 EXPRESSION TAG SEQRES 1 A 157 SER ASP PRO GLU ILE SER GLU GLN ASP GLU GLU LYS LYS SEQRES 2 A 157 LYS TYR THR SER VAL CYS VAL GLY ARG GLU GLU ASP ILE SEQRES 3 A 157 ARG LYS SER GLU ARG MET THR ALA VAL VAL HIS ASP ARG SEQRES 4 A 157 GLU VAL VAL ILE PHE TYR HIS LYS GLY GLU TYR HIS ALA SEQRES 5 A 157 MET ASP ILE ARG CYS TYR HIS SER GLY GLY PRO LEU HIS SEQRES 6 A 157 LEU GLY GLU ILE GLU ASP PHE ASN GLY GLN SER CYS ILE SEQRES 7 A 157 VAL CYS PRO TRP HIS LYS TYR LYS ILE THR LEU ALA THR SEQRES 8 A 157 GLY GLU GLY LEU TYR GLN SER ILE ASN PRO LYS ASP PRO SEQRES 9 A 157 SER ALA LYS PRO LYS TRP CYS SER LYS GLY VAL LYS GLN SEQRES 10 A 157 ARG ILE HIS THR VAL LYS VAL ASP ASN GLY ASN ILE TYR SEQRES 11 A 157 VAL THR LEU SER LYS GLU PRO PHE LYS CYS ASP SER ASP SEQRES 12 A 157 TYR TYR ALA THR GLY GLU PHE LYS VAL ILE GLN SER SER SEQRES 13 A 157 SER HET FES A 201 4 HET EDO A 202 4 HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 FES FE2 S2 FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *48(H2 O) HELIX 1 1 GLU A 23 GLU A 30 1 8 HELIX 2 2 PRO A 63 GLY A 67 5 5 HELIX 3 3 CYS A 140 ALA A 146 5 7 SHEET 1 A 6 VAL A 18 ARG A 22 0 SHEET 2 A 6 ASN A 128 THR A 132 -1 O ILE A 129 N GLY A 21 SHEET 3 A 6 ILE A 119 ASP A 125 -1 N LYS A 123 O TYR A 130 SHEET 4 A 6 GLU A 49 ASP A 54 -1 N ALA A 52 O HIS A 120 SHEET 5 A 6 ARG A 39 HIS A 46 -1 N PHE A 44 O HIS A 51 SHEET 6 A 6 ARG A 31 VAL A 36 -1 N VAL A 36 O ARG A 39 SHEET 1 B 5 GLU A 68 PHE A 72 0 SHEET 2 B 5 GLN A 75 VAL A 79 -1 O GLN A 75 N PHE A 72 SHEET 3 B 5 LYS A 86 THR A 88 -1 O ILE A 87 N ILE A 78 SHEET 4 B 5 GLU A 93 SER A 98 -1 O LEU A 95 N LYS A 86 SHEET 5 B 5 LYS A 109 VAL A 115 -1 O CYS A 111 N TYR A 96 LINK SG CYS A 57 FE2 FES A 201 1555 1555 2.37 LINK ND1 HIS A 59 FE1 FES A 201 1555 1555 2.10 LINK SG CYS A 80 FE2 FES A 201 1555 1555 2.32 LINK ND1 HIS A 83 FE1 FES A 201 1555 1555 2.20 CISPEP 1 GLU A 136 PRO A 137 0 -7.51 SITE 1 AC1 7 CYS A 57 HIS A 59 SER A 60 GLY A 62 SITE 2 AC1 7 CYS A 80 HIS A 83 TYR A 85 SITE 1 AC2 3 HIS A 65 LEU A 66 HOH A 226 CRYST1 52.413 52.413 108.808 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019079 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019079 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009190 0.00000