data_3DCK
#
_entry.id 3DCK
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.388
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3DCK pdb_00003dck 10.2210/pdb3dck/pdb
RCSB RCSB047868 ? ?
WWPDB D_1000047868 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2008-08-19
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2013-10-16
4 'Structure model' 1 3 2017-10-25
5 'Structure model' 1 4 2023-11-01
6 'Structure model' 1 5 2023-11-15
7 'Structure model' 1 6 2024-03-20
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' Advisory
2 2 'Structure model' 'Version format compliance'
3 3 'Structure model' 'Non-polymer description'
4 4 'Structure model' 'Refinement description'
5 5 'Structure model' 'Data collection'
6 5 'Structure model' 'Database references'
7 5 'Structure model' 'Derived calculations'
8 5 'Structure model' 'Refinement description'
9 6 'Structure model' 'Data collection'
10 7 'Structure model' 'Source and taxonomy'
11 7 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' software
2 5 'Structure model' chem_comp_atom
3 5 'Structure model' chem_comp_bond
4 5 'Structure model' database_2
5 5 'Structure model' pdbx_initial_refinement_model
6 5 'Structure model' struct_conn
7 5 'Structure model' struct_sheet
8 5 'Structure model' struct_site
9 6 'Structure model' chem_comp_atom
10 6 'Structure model' chem_comp_bond
11 7 'Structure model' entity
12 7 'Structure model' pdbx_entity_src_syn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 5 'Structure model' '_database_2.pdbx_DOI'
2 5 'Structure model' '_database_2.pdbx_database_accession'
3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
4 5 'Structure model' '_struct_sheet.number_strands'
5 5 'Structure model' '_struct_site.pdbx_auth_asym_id'
6 5 'Structure model' '_struct_site.pdbx_auth_comp_id'
7 5 'Structure model' '_struct_site.pdbx_auth_seq_id'
8 6 'Structure model' '_chem_comp_atom.atom_id'
9 6 'Structure model' '_chem_comp_bond.atom_id_2'
10 7 'Structure model' '_entity.details'
#
_pdbx_database_status.entry_id 3DCK
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.recvd_initial_deposition_date 2008-06-03
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 3DCR
_pdbx_database_related.details .
_pdbx_database_related.content_type unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Torbeev, V.Y.' 1
'Mandal, K.' 2
'Terechko, V.A.' 3
'Kent, S.B.H.' 4
#
_citation.id primary
_citation.title
'Crystal structure of chemically synthesized HIV-1 protease and a ketomethylene isostere inhibitor based on the p2/NC cleavage site'
_citation.journal_abbrev Bioorg.Med.Chem.Lett.
_citation.journal_volume 18
_citation.page_first 4554
_citation.page_last 4557
_citation.year 2008
_citation.journal_id_ASTM BMCLE8
_citation.country UK
_citation.journal_id_ISSN 0960-894X
_citation.journal_id_CSD 1127
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 18657969
_citation.pdbx_database_id_DOI 10.1016/j.bmcl.2008.07.039
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Torbeev, V.Y.' 1 ?
primary 'Mandal, K.' 2 ?
primary 'Terechko, V.A.' 3 ?
primary 'Kent, S.B.H.' 4 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'Chemical analogue HIV-1 protease' 10759.640 2 3.4.23.16 D25N 'HIV-1 protease' ?
2 non-polymer syn
;(2S)-2-{[(2R,5S)-5-{[(2S,3S)-2-{[(2S,3R)-2-(acetylamino)-3-hydroxybutanoyl]amino}-3-methylpentanoyl]amino}-2-butyl-4-oxononanoyl]amino}-N~1~-[(2S)-1-amino-5-carbamimidamido-1-oxopentan-2-yl]pentanediamide
;
782.971 1 ? ? ? 'The peptide inhibitor was chemically synthesized'
3 water nat water 18.015 83 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code
;PQITLWKRPLVTIRIGGQLKEALLNTGADDTVIEE(NLE)NLPG(YCM)WKPK(NLE)IGGIGGFIKVRQYDQIPVEI
(ABA)GHKAIGTVLVGPTPVNIIGRNLLTQIG(ABA)TLNF
;
_entity_poly.pdbx_seq_one_letter_code_can
;PQITLWKRPLVTIRIGGQLKEALLNTGADDTVIEELNLPGCWKPKLIGGIGGFIKVRQYDQIPVEIAGHKAIGTVLVGPT
PVNIIGRNLLTQIGATLNF
;
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2
;(2S)-2-{[(2R,5S)-5-{[(2S,3S)-2-{[(2S,3R)-2-(acetylamino)-3-hydroxybutanoyl]amino}-3-methylpentanoyl]amino}-2-butyl-4-oxononanoyl]amino}-N~1~-[(2S)-1-amino-5-carbamimidamido-1-oxopentan-2-yl]pentanediamide
;
KVI
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 PRO n
1 2 GLN n
1 3 ILE n
1 4 THR n
1 5 LEU n
1 6 TRP n
1 7 LYS n
1 8 ARG n
1 9 PRO n
1 10 LEU n
1 11 VAL n
1 12 THR n
1 13 ILE n
1 14 ARG n
1 15 ILE n
1 16 GLY n
1 17 GLY n
1 18 GLN n
1 19 LEU n
1 20 LYS n
1 21 GLU n
1 22 ALA n
1 23 LEU n
1 24 LEU n
1 25 ASN n
1 26 THR n
1 27 GLY n
1 28 ALA n
1 29 ASP n
1 30 ASP n
1 31 THR n
1 32 VAL n
1 33 ILE n
1 34 GLU n
1 35 GLU n
1 36 NLE n
1 37 ASN n
1 38 LEU n
1 39 PRO n
1 40 GLY n
1 41 YCM n
1 42 TRP n
1 43 LYS n
1 44 PRO n
1 45 LYS n
1 46 NLE n
1 47 ILE n
1 48 GLY n
1 49 GLY n
1 50 ILE n
1 51 GLY n
1 52 GLY n
1 53 PHE n
1 54 ILE n
1 55 LYS n
1 56 VAL n
1 57 ARG n
1 58 GLN n
1 59 TYR n
1 60 ASP n
1 61 GLN n
1 62 ILE n
1 63 PRO n
1 64 VAL n
1 65 GLU n
1 66 ILE n
1 67 ABA n
1 68 GLY n
1 69 HIS n
1 70 LYS n
1 71 ALA n
1 72 ILE n
1 73 GLY n
1 74 THR n
1 75 VAL n
1 76 LEU n
1 77 VAL n
1 78 GLY n
1 79 PRO n
1 80 THR n
1 81 PRO n
1 82 VAL n
1 83 ASN n
1 84 ILE n
1 85 ILE n
1 86 GLY n
1 87 ARG n
1 88 ASN n
1 89 LEU n
1 90 LEU n
1 91 THR n
1 92 GLN n
1 93 ILE n
1 94 GLY n
1 95 ABA n
1 96 THR n
1 97 LEU n
1 98 ASN n
1 99 PHE n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details
'total chemical protein synthesis using solid phase peptide synthesis and native chemical ligation'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ABA 'L-peptide linking' n 'ALPHA-AMINOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
KVI peptide-like .
;(2S)-2-{[(2R,5S)-5-{[(2S,3S)-2-{[(2S,3R)-2-(acetylamino)-3-hydroxybutanoyl]amino}-3-methylpentanoyl]amino}-2-butyl-4-oxononanoyl]amino}-N~1~-[(2S)-1-amino-5-carbamimidamido-1-oxopentan-2-yl]pentanediamide
;
? 'C36 H66 N10 O9' 782.971
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
NLE 'L-peptide linking' n NORLEUCINE ? 'C6 H13 N O2' 131.173
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
YCM 'L-peptide linking' n 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' CYSTEINE-S-ACETAMIDE 'C5 H10 N2 O3 S' 178.209
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 PRO 1 1 1 PRO PRO A . n
A 1 2 GLN 2 2 2 GLN GLN A . n
A 1 3 ILE 3 3 3 ILE ILE A . n
A 1 4 THR 4 4 4 THR THR A . n
A 1 5 LEU 5 5 5 LEU LEU A . n
A 1 6 TRP 6 6 6 TRP TRP A . n
A 1 7 LYS 7 7 7 LYS LYS A . n
A 1 8 ARG 8 8 8 ARG ARG A . n
A 1 9 PRO 9 9 9 PRO PRO A . n
A 1 10 LEU 10 10 10 LEU LEU A . n
A 1 11 VAL 11 11 11 VAL VAL A . n
A 1 12 THR 12 12 12 THR THR A . n
A 1 13 ILE 13 13 13 ILE ILE A . n
A 1 14 ARG 14 14 14 ARG ARG A . n
A 1 15 ILE 15 15 15 ILE ILE A . n
A 1 16 GLY 16 16 16 GLY GLY A . n
A 1 17 GLY 17 17 17 GLY GLY A . n
A 1 18 GLN 18 18 18 GLN GLN A . n
A 1 19 LEU 19 19 19 LEU LEU A . n
A 1 20 LYS 20 20 20 LYS LYS A . n
A 1 21 GLU 21 21 21 GLU GLU A . n
A 1 22 ALA 22 22 22 ALA ALA A . n
A 1 23 LEU 23 23 23 LEU LEU A . n
A 1 24 LEU 24 24 24 LEU LEU A . n
A 1 25 ASN 25 25 25 ASN ASN A . n
A 1 26 THR 26 26 26 THR THR A . n
A 1 27 GLY 27 27 27 GLY GLY A . n
A 1 28 ALA 28 28 28 ALA ALA A . n
A 1 29 ASP 29 29 29 ASP ASP A . n
A 1 30 ASP 30 30 30 ASP ASP A . n
A 1 31 THR 31 31 31 THR THR A . n
A 1 32 VAL 32 32 32 VAL VAL A . n
A 1 33 ILE 33 33 33 ILE ILE A . n
A 1 34 GLU 34 34 34 GLU GLU A . n
A 1 35 GLU 35 35 35 GLU GLU A . n
A 1 36 NLE 36 36 36 NLE NLE A . n
A 1 37 ASN 37 37 37 ASN ASN A . n
A 1 38 LEU 38 38 38 LEU LEU A . n
A 1 39 PRO 39 39 39 PRO PRO A . n
A 1 40 GLY 40 40 40 GLY GLY A . n
A 1 41 YCM 41 41 41 YCM YCM A . n
A 1 42 TRP 42 42 42 TRP TRP A . n
A 1 43 LYS 43 43 43 LYS LYS A . n
A 1 44 PRO 44 44 44 PRO PRO A . n
A 1 45 LYS 45 45 45 LYS LYS A . n
A 1 46 NLE 46 46 46 NLE NLE A . n
A 1 47 ILE 47 47 47 ILE ILE A . n
A 1 48 GLY 48 48 48 GLY GLY A . n
A 1 49 GLY 49 49 49 GLY GLY A . n
A 1 50 ILE 50 50 50 ILE ILE A . n
A 1 51 GLY 51 51 51 GLY GLY A . n
A 1 52 GLY 52 52 52 GLY GLY A . n
A 1 53 PHE 53 53 53 PHE PHE A . n
A 1 54 ILE 54 54 54 ILE ILE A . n
A 1 55 LYS 55 55 55 LYS LYS A . n
A 1 56 VAL 56 56 56 VAL VAL A . n
A 1 57 ARG 57 57 57 ARG ARG A . n
A 1 58 GLN 58 58 58 GLN GLN A . n
A 1 59 TYR 59 59 59 TYR TYR A . n
A 1 60 ASP 60 60 60 ASP ASP A . n
A 1 61 GLN 61 61 61 GLN GLN A . n
A 1 62 ILE 62 62 62 ILE ILE A . n
A 1 63 PRO 63 63 63 PRO PRO A . n
A 1 64 VAL 64 64 64 VAL VAL A . n
A 1 65 GLU 65 65 65 GLU GLU A . n
A 1 66 ILE 66 66 66 ILE ILE A . n
A 1 67 ABA 67 67 67 ABA ABA A . n
A 1 68 GLY 68 68 68 GLY GLY A . n
A 1 69 HIS 69 69 69 HIS HIS A . n
A 1 70 LYS 70 70 70 LYS LYS A . n
A 1 71 ALA 71 71 71 ALA ALA A . n
A 1 72 ILE 72 72 72 ILE ILE A . n
A 1 73 GLY 73 73 73 GLY GLY A . n
A 1 74 THR 74 74 74 THR THR A . n
A 1 75 VAL 75 75 75 VAL VAL A . n
A 1 76 LEU 76 76 76 LEU LEU A . n
A 1 77 VAL 77 77 77 VAL VAL A . n
A 1 78 GLY 78 78 78 GLY GLY A . n
A 1 79 PRO 79 79 79 PRO PRO A . n
A 1 80 THR 80 80 80 THR THR A . n
A 1 81 PRO 81 81 81 PRO PRO A . n
A 1 82 VAL 82 82 82 VAL VAL A . n
A 1 83 ASN 83 83 83 ASN ASN A . n
A 1 84 ILE 84 84 84 ILE ILE A . n
A 1 85 ILE 85 85 85 ILE ILE A . n
A 1 86 GLY 86 86 86 GLY GLY A . n
A 1 87 ARG 87 87 87 ARG ARG A . n
A 1 88 ASN 88 88 88 ASN ASN A . n
A 1 89 LEU 89 89 89 LEU LEU A . n
A 1 90 LEU 90 90 90 LEU LEU A . n
A 1 91 THR 91 91 91 THR THR A . n
A 1 92 GLN 92 92 92 GLN GLN A . n
A 1 93 ILE 93 93 93 ILE ILE A . n
A 1 94 GLY 94 94 94 GLY GLY A . n
A 1 95 ABA 95 95 95 ABA ABA A . n
A 1 96 THR 96 96 96 THR THR A . n
A 1 97 LEU 97 97 97 LEU LEU A . n
A 1 98 ASN 98 98 98 ASN ASN A . n
A 1 99 PHE 99 99 99 PHE PHE A . n
B 1 1 PRO 1 1 1 PRO PRO B . n
B 1 2 GLN 2 2 2 GLN GLN B . n
B 1 3 ILE 3 3 3 ILE ILE B . n
B 1 4 THR 4 4 4 THR THR B . n
B 1 5 LEU 5 5 5 LEU LEU B . n
B 1 6 TRP 6 6 6 TRP TRP B . n
B 1 7 LYS 7 7 7 LYS LYS B . n
B 1 8 ARG 8 8 8 ARG ARG B . n
B 1 9 PRO 9 9 9 PRO PRO B . n
B 1 10 LEU 10 10 10 LEU LEU B . n
B 1 11 VAL 11 11 11 VAL VAL B . n
B 1 12 THR 12 12 12 THR THR B . n
B 1 13 ILE 13 13 13 ILE ILE B . n
B 1 14 ARG 14 14 14 ARG ARG B . n
B 1 15 ILE 15 15 15 ILE ILE B . n
B 1 16 GLY 16 16 16 GLY GLY B . n
B 1 17 GLY 17 17 17 GLY GLY B . n
B 1 18 GLN 18 18 18 GLN GLN B . n
B 1 19 LEU 19 19 19 LEU LEU B . n
B 1 20 LYS 20 20 20 LYS LYS B . n
B 1 21 GLU 21 21 21 GLU GLU B . n
B 1 22 ALA 22 22 22 ALA ALA B . n
B 1 23 LEU 23 23 23 LEU LEU B . n
B 1 24 LEU 24 24 24 LEU LEU B . n
B 1 25 ASN 25 25 25 ASN ASN B . n
B 1 26 THR 26 26 26 THR THR B . n
B 1 27 GLY 27 27 27 GLY GLY B . n
B 1 28 ALA 28 28 28 ALA ALA B . n
B 1 29 ASP 29 29 29 ASP ASP B . n
B 1 30 ASP 30 30 30 ASP ASP B . n
B 1 31 THR 31 31 31 THR THR B . n
B 1 32 VAL 32 32 32 VAL VAL B . n
B 1 33 ILE 33 33 33 ILE ILE B . n
B 1 34 GLU 34 34 34 GLU GLU B . n
B 1 35 GLU 35 35 35 GLU GLU B . n
B 1 36 NLE 36 36 36 NLE NLE B . n
B 1 37 ASN 37 37 37 ASN ASN B . n
B 1 38 LEU 38 38 38 LEU LEU B . n
B 1 39 PRO 39 39 39 PRO PRO B . n
B 1 40 GLY 40 40 40 GLY GLY B . n
B 1 41 YCM 41 41 41 YCM YCM B . n
B 1 42 TRP 42 42 42 TRP TRP B . n
B 1 43 LYS 43 43 43 LYS LYS B . n
B 1 44 PRO 44 44 44 PRO PRO B . n
B 1 45 LYS 45 45 45 LYS LYS B . n
B 1 46 NLE 46 46 46 NLE NLE B . n
B 1 47 ILE 47 47 47 ILE ILE B . n
B 1 48 GLY 48 48 48 GLY GLY B . n
B 1 49 GLY 49 49 49 GLY GLY B . n
B 1 50 ILE 50 50 50 ILE ILE B . n
B 1 51 GLY 51 51 51 GLY GLY B . n
B 1 52 GLY 52 52 52 GLY GLY B . n
B 1 53 PHE 53 53 53 PHE PHE B . n
B 1 54 ILE 54 54 54 ILE ILE B . n
B 1 55 LYS 55 55 55 LYS LYS B . n
B 1 56 VAL 56 56 56 VAL VAL B . n
B 1 57 ARG 57 57 57 ARG ARG B . n
B 1 58 GLN 58 58 58 GLN GLN B . n
B 1 59 TYR 59 59 59 TYR TYR B . n
B 1 60 ASP 60 60 60 ASP ASP B . n
B 1 61 GLN 61 61 61 GLN GLN B . n
B 1 62 ILE 62 62 62 ILE ILE B . n
B 1 63 PRO 63 63 63 PRO PRO B . n
B 1 64 VAL 64 64 64 VAL VAL B . n
B 1 65 GLU 65 65 65 GLU GLU B . n
B 1 66 ILE 66 66 66 ILE ILE B . n
B 1 67 ABA 67 67 67 ABA ABA B . n
B 1 68 GLY 68 68 68 GLY GLY B . n
B 1 69 HIS 69 69 69 HIS HIS B . n
B 1 70 LYS 70 70 70 LYS LYS B . n
B 1 71 ALA 71 71 71 ALA ALA B . n
B 1 72 ILE 72 72 72 ILE ILE B . n
B 1 73 GLY 73 73 73 GLY GLY B . n
B 1 74 THR 74 74 74 THR THR B . n
B 1 75 VAL 75 75 75 VAL VAL B . n
B 1 76 LEU 76 76 76 LEU LEU B . n
B 1 77 VAL 77 77 77 VAL VAL B . n
B 1 78 GLY 78 78 78 GLY GLY B . n
B 1 79 PRO 79 79 79 PRO PRO B . n
B 1 80 THR 80 80 80 THR THR B . n
B 1 81 PRO 81 81 81 PRO PRO B . n
B 1 82 VAL 82 82 82 VAL VAL B . n
B 1 83 ASN 83 83 83 ASN ASN B . n
B 1 84 ILE 84 84 84 ILE ILE B . n
B 1 85 ILE 85 85 85 ILE ILE B . n
B 1 86 GLY 86 86 86 GLY GLY B . n
B 1 87 ARG 87 87 87 ARG ARG B . n
B 1 88 ASN 88 88 88 ASN ASN B . n
B 1 89 LEU 89 89 89 LEU LEU B . n
B 1 90 LEU 90 90 90 LEU LEU B . n
B 1 91 THR 91 91 91 THR THR B . n
B 1 92 GLN 92 92 92 GLN GLN B . n
B 1 93 ILE 93 93 93 ILE ILE B . n
B 1 94 GLY 94 94 94 GLY GLY B . n
B 1 95 ABA 95 95 95 ABA ABA B . n
B 1 96 THR 96 96 96 THR THR B . n
B 1 97 LEU 97 97 97 LEU LEU B . n
B 1 98 ASN 98 98 98 ASN ASN B . n
B 1 99 PHE 99 99 99 PHE PHE B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 KVI 1 101 0 KVI ACE B .
D 3 HOH 1 101 2 HOH HOH A .
D 3 HOH 2 102 7 HOH HOH A .
D 3 HOH 3 103 8 HOH HOH A .
D 3 HOH 4 104 9 HOH HOH A .
D 3 HOH 5 105 12 HOH HOH A .
D 3 HOH 6 106 15 HOH HOH A .
D 3 HOH 7 107 16 HOH HOH A .
D 3 HOH 8 108 18 HOH HOH A .
D 3 HOH 9 109 22 HOH HOH A .
D 3 HOH 10 110 24 HOH HOH A .
D 3 HOH 11 111 25 HOH HOH A .
D 3 HOH 12 112 26 HOH HOH A .
D 3 HOH 13 113 27 HOH HOH A .
D 3 HOH 14 114 30 HOH HOH A .
D 3 HOH 15 115 31 HOH HOH A .
D 3 HOH 16 116 34 HOH HOH A .
D 3 HOH 17 117 35 HOH HOH A .
D 3 HOH 18 118 44 HOH HOH A .
D 3 HOH 19 119 45 HOH HOH A .
D 3 HOH 20 120 47 HOH HOH A .
D 3 HOH 21 121 49 HOH HOH A .
D 3 HOH 22 122 50 HOH HOH A .
D 3 HOH 23 123 57 HOH HOH A .
D 3 HOH 24 124 60 HOH HOH A .
D 3 HOH 25 125 62 HOH HOH A .
D 3 HOH 26 126 63 HOH HOH A .
D 3 HOH 27 127 64 HOH HOH A .
D 3 HOH 28 128 65 HOH HOH A .
D 3 HOH 29 129 66 HOH HOH A .
D 3 HOH 30 130 67 HOH HOH A .
D 3 HOH 31 131 68 HOH HOH A .
D 3 HOH 32 132 69 HOH HOH A .
D 3 HOH 33 133 70 HOH HOH A .
D 3 HOH 34 134 71 HOH HOH A .
D 3 HOH 35 135 74 HOH HOH A .
D 3 HOH 36 136 75 HOH HOH A .
D 3 HOH 37 137 76 HOH HOH A .
D 3 HOH 38 138 80 HOH HOH A .
D 3 HOH 39 139 10 HOH HOH A .
D 3 HOH 40 140 53 HOH HOH A .
E 3 HOH 1 201 54 HOH HOH B .
E 3 HOH 2 202 81 HOH HOH B .
E 3 HOH 3 203 1 HOH HOH B .
E 3 HOH 4 204 4 HOH HOH B .
E 3 HOH 5 205 5 HOH HOH B .
E 3 HOH 6 206 6 HOH HOH B .
E 3 HOH 7 207 11 HOH HOH B .
E 3 HOH 8 208 13 HOH HOH B .
E 3 HOH 9 209 14 HOH HOH B .
E 3 HOH 10 210 17 HOH HOH B .
E 3 HOH 11 211 19 HOH HOH B .
E 3 HOH 12 212 20 HOH HOH B .
E 3 HOH 13 213 21 HOH HOH B .
E 3 HOH 14 214 23 HOH HOH B .
E 3 HOH 15 215 28 HOH HOH B .
E 3 HOH 16 216 29 HOH HOH B .
E 3 HOH 17 217 32 HOH HOH B .
E 3 HOH 18 218 33 HOH HOH B .
E 3 HOH 19 219 36 HOH HOH B .
E 3 HOH 20 220 38 HOH HOH B .
E 3 HOH 21 221 39 HOH HOH B .
E 3 HOH 22 222 40 HOH HOH B .
E 3 HOH 23 223 41 HOH HOH B .
E 3 HOH 24 224 42 HOH HOH B .
E 3 HOH 25 225 43 HOH HOH B .
E 3 HOH 26 226 46 HOH HOH B .
E 3 HOH 27 227 48 HOH HOH B .
E 3 HOH 28 228 51 HOH HOH B .
E 3 HOH 29 229 52 HOH HOH B .
E 3 HOH 30 230 55 HOH HOH B .
E 3 HOH 31 231 56 HOH HOH B .
E 3 HOH 32 232 58 HOH HOH B .
E 3 HOH 33 233 59 HOH HOH B .
E 3 HOH 34 234 61 HOH HOH B .
E 3 HOH 35 235 72 HOH HOH B .
E 3 HOH 36 236 73 HOH HOH B .
E 3 HOH 37 237 77 HOH HOH B .
E 3 HOH 38 238 78 HOH HOH B .
E 3 HOH 39 239 79 HOH HOH B .
E 3 HOH 40 240 83 HOH HOH B .
E 3 HOH 41 241 3 HOH HOH B .
E 3 HOH 42 242 37 HOH HOH B .
E 3 HOH 43 243 82 HOH HOH B .
#
loop_
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
_software.pdbx_ordinal
DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction'
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1
SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling'
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2
REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement
http://www.ccp4.ac.uk/main.html Fortran_77 ? 3
PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction'
http://pdb.rutgers.edu/software/ C++ ? 4
#
_cell.length_a 51.028
_cell.length_b 58.551
_cell.length_c 61.584
_cell.angle_alpha 90.000
_cell.angle_beta 90.000
_cell.angle_gamma 90.000
_cell.entry_id 3DCK
_cell.pdbx_unique_axis ?
_cell.Z_PDB 8
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.space_group_name_H-M 'P 21 21 21'
_symmetry.entry_id 3DCK
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.Int_Tables_number 19
_symmetry.cell_setting ?
_symmetry.space_group_name_Hall ?
#
_exptl.crystals_number 1
_exptl.entry_id 3DCK
_exptl.method 'X-RAY DIFFRACTION'
#
_exptl_crystal.id 1
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
_exptl_crystal.density_Matthews 2.07
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_percent_sol 40.47
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.pH 6.0
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_details
;0.1M CITRATE, 0.2M SODIUM PHOPHATE, 30% (W/V) AMMONIUM SULFATE, 10% (V/V) DMSO, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
;
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 110
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'MARMOSAIC 300 mm CCD'
_diffrn_detector.pdbx_collection_date 2007-06-07
_diffrn_detector.details 'Si(111) Double Crystal Monochrometer. Adjustable focusing mirrors in K-B geometry'
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.monochromator 'Double crystal cryo-cooled Si(111)'
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.97934
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'APS BEAMLINE 23-ID-D'
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.97934
_diffrn_source.pdbx_synchrotron_site APS
_diffrn_source.pdbx_synchrotron_beamline 23-ID-D
#
_reflns.entry_id 3DCK
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I 7.8
_reflns.d_resolution_high 1.80
_reflns.d_resolution_low 50.00
_reflns.number_all 17570
_reflns.number_obs 17428
_reflns.percent_possible_obs 99.2
_reflns.pdbx_Rmerge_I_obs 0.089
_reflns.pdbx_Rsym_value 0.070
_reflns.pdbx_netI_over_sigmaI 31.3
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 7.8
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 1.80
_reflns_shell.d_res_low 1.86
_reflns_shell.percent_possible_obs ?
_reflns_shell.percent_possible_all 98.6
_reflns_shell.Rmerge_I_obs 0.590
_reflns_shell.meanI_over_sigI_obs 3.9
_reflns_shell.pdbx_Rsym_value 0.495
_reflns_shell.pdbx_redundancy 7.9
_reflns_shell.number_unique_all 1708
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 3DCK
_refine.ls_d_res_high 1.800
_refine.ls_d_res_low 20.000
_refine.pdbx_ls_sigma_F 0.00
_refine.ls_percent_reflns_obs 98.610
_refine.ls_number_reflns_obs 17373
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_R_Free_selection_details RANDOM
_refine.ls_R_factor_obs 0.196
_refine.ls_R_factor_R_work 0.194
_refine.ls_R_factor_R_free 0.223
_refine.ls_percent_reflns_R_free 5.100
_refine.ls_number_reflns_R_free 882
_refine.B_iso_mean 24.053
_refine.aniso_B[1][1] -1.470
_refine.aniso_B[2][2] 1.780
_refine.aniso_B[3][3] -0.320
_refine.aniso_B[1][2] 0.000
_refine.aniso_B[1][3] 0.000
_refine.aniso_B[2][3] 0.000
_refine.correlation_coeff_Fo_to_Fc 0.948
_refine.correlation_coeff_Fo_to_Fc_free 0.946
_refine.pdbx_overall_ESU_R 0.147
_refine.pdbx_overall_ESU_R_Free 0.130
_refine.overall_SU_ML 0.082
_refine.overall_SU_B 5.356
_refine.solvent_model_details MASK
_refine.pdbx_solvent_vdw_probe_radii 1.200
_refine.pdbx_solvent_ion_probe_radii 0.800
_refine.pdbx_solvent_shrinkage_radii 0.800
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_ls_sigma_I ?
_refine.ls_number_reflns_all ?
_refine.ls_R_factor_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_starting_model 'PDB ENTRY 4HVP'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.pdbx_isotropic_thermal_model ?
_refine.details ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL'
_refine.pdbx_diffrn_id 1
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1518
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 55
_refine_hist.number_atoms_solvent 83
_refine_hist.number_atoms_total 1656
_refine_hist.d_res_high 1.800
_refine_hist.d_res_low 20.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 1597 0.017 0.022 ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 2158 1.595 1.996 ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg 197 5.954 5.000 ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg 57 37.584 25.088 ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg 283 14.153 15.000 ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg 8 22.400 15.000 ? 'X-RAY DIFFRACTION' ?
r_chiral_restr 254 0.118 0.200 ? 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 1132 0.007 0.020 ? 'X-RAY DIFFRACTION' ?
r_nbd_refined 662 0.257 0.200 ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined 1060 0.314 0.200 ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 80 0.163 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 34 0.173 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 3 0.187 0.200 ? 'X-RAY DIFFRACTION' ?
r_mcbond_it 1035 1.048 1.500 ? 'X-RAY DIFFRACTION' ?
r_mcangle_it 1633 1.648 2.000 ? 'X-RAY DIFFRACTION' ?
r_scbond_it 633 2.514 3.000 ? 'X-RAY DIFFRACTION' ?
r_scangle_it 525 4.185 4.500 ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.d_res_high 1.801
_refine_ls_shell.d_res_low 1.848
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.percent_reflns_obs 89.250
_refine_ls_shell.number_reflns_R_work 1057
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_R_work 0.216
_refine_ls_shell.R_factor_R_free 0.310
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 72
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.number_reflns_all 1129
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 3DCK
_struct.title
'X-ray structure of D25N chemical analogue of HIV-1 protease complexed with ketomethylene isostere inhibitor'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3DCK
_struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR'
_struct_keywords.text
'HIV-1 protease, homodimer, beta-turns, beta-strand, HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR complex'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 3 ?
E N N 3 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3DCK
_struct_ref.pdbx_db_accession 3DCK
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_db_isoform ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 3DCK A 1 ? 99 ? 3DCK 1 ? 99 ? 1 99
2 1 3DCK B 1 ? 99 ? 3DCK 1 ? 99 ? 1 99
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 4080 ?
1 MORE -22 ?
1 'SSA (A^2)' 9550 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6
HELX_P HELX_P2 2 GLY B 86 ? THR B 91 ? GLY B 86 THR B 91 1 ? 6
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A GLU 35 C ? ? ? 1_555 A NLE 36 N ? ? A GLU 35 A NLE 36 1_555 ? ? ? ? ? ? ? 1.331 ? ?
covale2 covale both ? A NLE 36 C ? ? ? 1_555 A ASN 37 N ? ? A NLE 36 A ASN 37 1_555 ? ? ? ? ? ? ? 1.323 ? ?
covale3 covale both ? A GLY 40 C ? ? ? 1_555 A YCM 41 N ? ? A GLY 40 A YCM 41 1_555 ? ? ? ? ? ? ? 1.320 ? ?
covale4 covale both ? A YCM 41 C ? ? ? 1_555 A TRP 42 N ? ? A YCM 41 A TRP 42 1_555 ? ? ? ? ? ? ? 1.329 ? ?
covale5 covale both ? A LYS 45 C ? ? ? 1_555 A NLE 46 N ? ? A LYS 45 A NLE 46 1_555 ? ? ? ? ? ? ? 1.328 ? ?
covale6 covale both ? A NLE 46 C ? ? ? 1_555 A ILE 47 N ? ? A NLE 46 A ILE 47 1_555 ? ? ? ? ? ? ? 1.334 ? ?
covale7 covale both ? A ILE 66 C ? ? ? 1_555 A ABA 67 N ? ? A ILE 66 A ABA 67 1_555 ? ? ? ? ? ? ? 1.326 ? ?
covale8 covale both ? A ABA 67 C ? ? ? 1_555 A GLY 68 N ? ? A ABA 67 A GLY 68 1_555 ? ? ? ? ? ? ? 1.341 ? ?
covale9 covale both ? A GLY 94 C ? ? ? 1_555 A ABA 95 N ? ? A GLY 94 A ABA 95 1_555 ? ? ? ? ? ? ? 1.339 ? ?
covale10 covale both ? A ABA 95 C ? ? ? 1_555 A THR 96 N ? ? A ABA 95 A THR 96 1_555 ? ? ? ? ? ? ? 1.332 ? ?
covale11 covale both ? B GLU 35 C ? ? ? 1_555 B NLE 36 N ? ? B GLU 35 B NLE 36 1_555 ? ? ? ? ? ? ? 1.332 ? ?
covale12 covale both ? B NLE 36 C ? ? ? 1_555 B ASN 37 N ? ? B NLE 36 B ASN 37 1_555 ? ? ? ? ? ? ? 1.330 ? ?
covale13 covale both ? B GLY 40 C ? ? ? 1_555 B YCM 41 N ? ? B GLY 40 B YCM 41 1_555 ? ? ? ? ? ? ? 1.322 ? ?
covale14 covale both ? B YCM 41 C ? ? ? 1_555 B TRP 42 N ? ? B YCM 41 B TRP 42 1_555 ? ? ? ? ? ? ? 1.318 ? ?
covale15 covale both ? B LYS 45 C ? ? ? 1_555 B NLE 46 N ? ? B LYS 45 B NLE 46 1_555 ? ? ? ? ? ? ? 1.340 ? ?
covale16 covale both ? B NLE 46 C ? ? ? 1_555 B ILE 47 N ? ? B NLE 46 B ILE 47 1_555 ? ? ? ? ? ? ? 1.332 ? ?
covale17 covale both ? B ILE 66 C ? ? ? 1_555 B ABA 67 N ? ? B ILE 66 B ABA 67 1_555 ? ? ? ? ? ? ? 1.340 ? ?
covale18 covale both ? B ABA 67 C ? ? ? 1_555 B GLY 68 N ? ? B ABA 67 B GLY 68 1_555 ? ? ? ? ? ? ? 1.329 ? ?
covale19 covale both ? B GLY 94 C ? ? ? 1_555 B ABA 95 N ? ? B GLY 94 B ABA 95 1_555 ? ? ? ? ? ? ? 1.322 ? ?
covale20 covale both ? B ABA 95 C ? ? ? 1_555 B THR 96 N ? ? B ABA 95 B THR 96 1_555 ? ? ? ? ? ? ? 1.344 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 4 ?
B ? 8 ?
C ? 8 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
B 1 2 ? anti-parallel
B 2 3 ? anti-parallel
B 3 4 ? parallel
B 4 5 ? anti-parallel
B 5 6 ? parallel
B 6 7 ? anti-parallel
B 7 8 ? anti-parallel
C 1 2 ? anti-parallel
C 2 3 ? anti-parallel
C 3 4 ? parallel
C 4 5 ? anti-parallel
C 5 6 ? parallel
C 6 7 ? anti-parallel
C 7 8 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 GLN A 2 ? ILE A 3 ? GLN A 2 ILE A 3
A 2 THR B 96 ? ASN B 98 ? THR B 96 ASN B 98
A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98
A 4 GLN B 2 ? ILE B 3 ? GLN B 2 ILE B 3
B 1 LYS A 43 ? GLY A 49 ? LYS A 43 GLY A 49
B 2 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66
B 3 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77
B 4 VAL A 32 ? ILE A 33 ? VAL A 32 ILE A 33
B 5 ASN A 83 ? ILE A 85 ? ASN A 83 ILE A 85
B 6 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24
B 7 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15
B 8 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66
C 1 LYS B 43 ? GLY B 49 ? LYS B 43 GLY B 49
C 2 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66
C 3 HIS B 69 ? VAL B 77 ? HIS B 69 VAL B 77
C 4 VAL B 32 ? ILE B 33 ? VAL B 32 ILE B 33
C 5 ILE B 84 ? ILE B 85 ? ILE B 84 ILE B 85
C 6 GLN B 18 ? LEU B 24 ? GLN B 18 LEU B 24
C 7 LEU B 10 ? ILE B 15 ? LEU B 10 ILE B 15
C 8 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N ILE A 3 ? N ILE A 3 O LEU B 97 ? O LEU B 97
A 2 3 O THR B 96 ? O THR B 96 N ASN A 98 ? N ASN A 98
A 3 4 N LEU A 97 ? N LEU A 97 O ILE B 3 ? O ILE B 3
B 1 2 N LYS A 43 ? N LYS A 43 O GLN A 58 ? O GLN A 58
B 2 3 N ILE A 66 ? N ILE A 66 O HIS A 69 ? O HIS A 69
B 3 4 O LEU A 76 ? O LEU A 76 N ILE A 33 ? N ILE A 33
B 4 5 N VAL A 32 ? N VAL A 32 O ILE A 84 ? O ILE A 84
B 5 6 O ILE A 85 ? O ILE A 85 N LEU A 23 ? N LEU A 23
B 6 7 O LYS A 20 ? O LYS A 20 N ILE A 13 ? N ILE A 13
B 7 8 N ARG A 14 ? N ARG A 14 O GLU A 65 ? O GLU A 65
C 1 2 N LYS B 43 ? N LYS B 43 O GLN B 58 ? O GLN B 58
C 2 3 N ILE B 66 ? N ILE B 66 O HIS B 69 ? O HIS B 69
C 3 4 O LEU B 76 ? O LEU B 76 N ILE B 33 ? N ILE B 33
C 4 5 N VAL B 32 ? N VAL B 32 O ILE B 84 ? O ILE B 84
C 5 6 O ILE B 85 ? O ILE B 85 N LEU B 23 ? N LEU B 23
C 6 7 O LYS B 20 ? O LYS B 20 N ILE B 13 ? N ILE B 13
C 7 8 N ARG B 14 ? N ARG B 14 O GLU B 65 ? O GLU B 65
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id B
_struct_site.pdbx_auth_comp_id KVI
_struct_site.pdbx_auth_seq_id 101
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 23
_struct_site.details 'BINDING SITE FOR RESIDUE KVI B 101'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 23 ARG A 8 ? ARG A 8 . ? 1_555 ?
2 AC1 23 ASN A 25 ? ASN A 25 . ? 1_555 ?
3 AC1 23 GLY A 27 ? GLY A 27 . ? 1_555 ?
4 AC1 23 ALA A 28 ? ALA A 28 . ? 1_555 ?
5 AC1 23 ASP A 29 ? ASP A 29 . ? 1_555 ?
6 AC1 23 ASP A 30 ? ASP A 30 . ? 1_555 ?
7 AC1 23 GLY A 48 ? GLY A 48 . ? 1_555 ?
8 AC1 23 GLY A 49 ? GLY A 49 . ? 1_555 ?
9 AC1 23 ASN B 25 ? ASN B 25 . ? 1_555 ?
10 AC1 23 GLY B 27 ? GLY B 27 . ? 1_555 ?
11 AC1 23 ALA B 28 ? ALA B 28 . ? 1_555 ?
12 AC1 23 ASP B 29 ? ASP B 29 . ? 1_555 ?
13 AC1 23 ASP B 30 ? ASP B 30 . ? 1_555 ?
14 AC1 23 ILE B 47 ? ILE B 47 . ? 1_555 ?
15 AC1 23 GLY B 48 ? GLY B 48 . ? 1_555 ?
16 AC1 23 GLY B 49 ? GLY B 49 . ? 1_555 ?
17 AC1 23 THR B 80 ? THR B 80 . ? 1_555 ?
18 AC1 23 PRO B 81 ? PRO B 81 . ? 1_555 ?
19 AC1 23 VAL B 82 ? VAL B 82 . ? 1_555 ?
20 AC1 23 HOH E . ? HOH B 204 . ? 1_555 ?
21 AC1 23 HOH E . ? HOH B 221 . ? 1_555 ?
22 AC1 23 HOH E . ? HOH B 241 . ? 1_555 ?
23 AC1 23 HOH E . ? HOH B 242 . ? 1_555 ?
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id GLU
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 35
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi -36.14
_pdbx_validate_torsion.psi 120.40
#
_pdbx_molecule_features.prd_id PRD_001174
_pdbx_molecule_features.name
;(2S)-2-{[(2R,5S)-5-{[(2S,3S)-2-{[(2S,3R)-2-(ACETYLAMINO)-3-HYDROXYBUTANOYL]AMINO}-3-METHYLPENTANOYL]AMINO}-2-BUTYL-4-OXONONANOYL]AMINO}-N~1~-[(2S)-1-AMINO-5-CARBAMIMIDAMIDO-1-OXOPENTAN-2-YL]PENTANEDIAMIDE
;
_pdbx_molecule_features.type Peptide-like
_pdbx_molecule_features.class Inhibitor
_pdbx_molecule_features.details ?
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_001174
_pdbx_molecule.asym_id C
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A NLE 36 A NLE 36 ? LEU NORLEUCINE
2 A YCM 41 A YCM 41 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE'
3 A NLE 46 A NLE 46 ? LEU NORLEUCINE
4 A ABA 67 A ABA 67 ? ALA 'ALPHA-AMINOBUTYRIC ACID'
5 A ABA 95 A ABA 95 ? ALA 'ALPHA-AMINOBUTYRIC ACID'
6 B NLE 36 B NLE 36 ? LEU NORLEUCINE
7 B YCM 41 B YCM 41 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE'
8 B NLE 46 B NLE 46 ? LEU NORLEUCINE
9 B ABA 67 B ABA 67 ? ALA 'ALPHA-AMINOBUTYRIC ACID'
10 B ABA 95 B ABA 95 ? ALA 'ALPHA-AMINOBUTYRIC ACID'
#
_pdbx_refine_tls.id 1
_pdbx_refine_tls.details ?
_pdbx_refine_tls.method refined
_pdbx_refine_tls.origin_x -4.9432
_pdbx_refine_tls.origin_y 1.2977
_pdbx_refine_tls.origin_z -18.2686
_pdbx_refine_tls.T[1][1] -0.0597
_pdbx_refine_tls.T[2][2] -0.0572
_pdbx_refine_tls.T[3][3] -0.0993
_pdbx_refine_tls.T[1][2] 0.0020
_pdbx_refine_tls.T[1][3] 0.0070
_pdbx_refine_tls.T[2][3] -0.0167
_pdbx_refine_tls.L[1][1] 2.7081
_pdbx_refine_tls.L[2][2] 1.6055
_pdbx_refine_tls.L[3][3] 1.2452
_pdbx_refine_tls.L[1][2] 0.6246
_pdbx_refine_tls.L[1][3] 0.3881
_pdbx_refine_tls.L[2][3] -0.6418
_pdbx_refine_tls.S[1][1] -0.0314
_pdbx_refine_tls.S[2][2] 0.0786
_pdbx_refine_tls.S[3][3] -0.0472
_pdbx_refine_tls.S[1][2] -0.0809
_pdbx_refine_tls.S[1][3] -0.0327
_pdbx_refine_tls.S[2][3] -0.0260
_pdbx_refine_tls.S[2][1] -0.0023
_pdbx_refine_tls.S[3][1] 0.0011
_pdbx_refine_tls.S[3][2] -0.1348
_pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION'
#
loop_
_pdbx_refine_tls_group.id
_pdbx_refine_tls_group.refine_tls_id
_pdbx_refine_tls_group.beg_auth_asym_id
_pdbx_refine_tls_group.end_auth_asym_id
_pdbx_refine_tls_group.end_auth_seq_id
_pdbx_refine_tls_group.selection
_pdbx_refine_tls_group.beg_auth_seq_id
_pdbx_refine_tls_group.beg_label_asym_id
_pdbx_refine_tls_group.beg_label_seq_id
_pdbx_refine_tls_group.end_label_asym_id
_pdbx_refine_tls_group.end_label_seq_id
_pdbx_refine_tls_group.pdbx_refine_id
_pdbx_refine_tls_group.selection_details
1 1 A A 99 ? 1 A 1 A 99 'X-RAY DIFFRACTION' ?
2 1 B B 101 ? 101 C 0 C 5 'X-RAY DIFFRACTION' ?
3 1 B B 99 ? 1 B 1 B 99 'X-RAY DIFFRACTION' ?
#
_pdbx_entry_details.entry_id 3DCK
_pdbx_entry_details.sequence_details
;SEQUENCE OF ENTITY 1 WAS BASED ON UNP DB CODE POL_HV1A2, ACCESSION P03369, RESIDUES 491-589. D25N OF THE SEQUENCE WAS A DESIGNED MUTATION TO THE DATABASE.
;
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ABA N N N N 1
ABA CA C N S 2
ABA C C N N 3
ABA O O N N 4
ABA CB C N N 5
ABA CG C N N 6
ABA OXT O N N 7
ABA H H N N 8
ABA H2 H N N 9
ABA HA H N N 10
ABA HB3 H N N 11
ABA HB2 H N N 12
ABA HG1 H N N 13
ABA HG3 H N N 14
ABA HG2 H N N 15
ABA HXT H N N 16
ALA N N N N 17
ALA CA C N S 18
ALA C C N N 19
ALA O O N N 20
ALA CB C N N 21
ALA OXT O N N 22
ALA H H N N 23
ALA H2 H N N 24
ALA HA H N N 25
ALA HB1 H N N 26
ALA HB2 H N N 27
ALA HB3 H N N 28
ALA HXT H N N 29
ARG N N N N 30
ARG CA C N S 31
ARG C C N N 32
ARG O O N N 33
ARG CB C N N 34
ARG CG C N N 35
ARG CD C N N 36
ARG NE N N N 37
ARG CZ C N N 38
ARG NH1 N N N 39
ARG NH2 N N N 40
ARG OXT O N N 41
ARG H H N N 42
ARG H2 H N N 43
ARG HA H N N 44
ARG HB2 H N N 45
ARG HB3 H N N 46
ARG HG2 H N N 47
ARG HG3 H N N 48
ARG HD2 H N N 49
ARG HD3 H N N 50
ARG HE H N N 51
ARG HH11 H N N 52
ARG HH12 H N N 53
ARG HH21 H N N 54
ARG HH22 H N N 55
ARG HXT H N N 56
ASN N N N N 57
ASN CA C N S 58
ASN C C N N 59
ASN O O N N 60
ASN CB C N N 61
ASN CG C N N 62
ASN OD1 O N N 63
ASN ND2 N N N 64
ASN OXT O N N 65
ASN H H N N 66
ASN H2 H N N 67
ASN HA H N N 68
ASN HB2 H N N 69
ASN HB3 H N N 70
ASN HD21 H N N 71
ASN HD22 H N N 72
ASN HXT H N N 73
ASP N N N N 74
ASP CA C N S 75
ASP C C N N 76
ASP O O N N 77
ASP CB C N N 78
ASP CG C N N 79
ASP OD1 O N N 80
ASP OD2 O N N 81
ASP OXT O N N 82
ASP H H N N 83
ASP H2 H N N 84
ASP HA H N N 85
ASP HB2 H N N 86
ASP HB3 H N N 87
ASP HD2 H N N 88
ASP HXT H N N 89
GLN N N N N 90
GLN CA C N S 91
GLN C C N N 92
GLN O O N N 93
GLN CB C N N 94
GLN CG C N N 95
GLN CD C N N 96
GLN OE1 O N N 97
GLN NE2 N N N 98
GLN OXT O N N 99
GLN H H N N 100
GLN H2 H N N 101
GLN HA H N N 102
GLN HB2 H N N 103
GLN HB3 H N N 104
GLN HG2 H N N 105
GLN HG3 H N N 106
GLN HE21 H N N 107
GLN HE22 H N N 108
GLN HXT H N N 109
GLU N N N N 110
GLU CA C N S 111
GLU C C N N 112
GLU O O N N 113
GLU CB C N N 114
GLU CG C N N 115
GLU CD C N N 116
GLU OE1 O N N 117
GLU OE2 O N N 118
GLU OXT O N N 119
GLU H H N N 120
GLU H2 H N N 121
GLU HA H N N 122
GLU HB2 H N N 123
GLU HB3 H N N 124
GLU HG2 H N N 125
GLU HG3 H N N 126
GLU HE2 H N N 127
GLU HXT H N N 128
GLY N N N N 129
GLY CA C N N 130
GLY C C N N 131
GLY O O N N 132
GLY OXT O N N 133
GLY H H N N 134
GLY H2 H N N 135
GLY HA2 H N N 136
GLY HA3 H N N 137
GLY HXT H N N 138
HIS N N N N 139
HIS CA C N S 140
HIS C C N N 141
HIS O O N N 142
HIS CB C N N 143
HIS CG C Y N 144
HIS ND1 N Y N 145
HIS CD2 C Y N 146
HIS CE1 C Y N 147
HIS NE2 N Y N 148
HIS OXT O N N 149
HIS H H N N 150
HIS H2 H N N 151
HIS HA H N N 152
HIS HB2 H N N 153
HIS HB3 H N N 154
HIS HD1 H N N 155
HIS HD2 H N N 156
HIS HE1 H N N 157
HIS HE2 H N N 158
HIS HXT H N N 159
HOH O O N N 160
HOH H1 H N N 161
HOH H2 H N N 162
ILE N N N N 163
ILE CA C N S 164
ILE C C N N 165
ILE O O N N 166
ILE CB C N S 167
ILE CG1 C N N 168
ILE CG2 C N N 169
ILE CD1 C N N 170
ILE OXT O N N 171
ILE H H N N 172
ILE H2 H N N 173
ILE HA H N N 174
ILE HB H N N 175
ILE HG12 H N N 176
ILE HG13 H N N 177
ILE HG21 H N N 178
ILE HG22 H N N 179
ILE HG23 H N N 180
ILE HD11 H N N 181
ILE HD12 H N N 182
ILE HD13 H N N 183
ILE HXT H N N 184
KVI C7 C N N 185
KVI O2 O N N 186
KVI C8 C N N 187
KVI N10 N N N 188
KVI C33 C N S 189
KVI C34 C N N 190
KVI O8 O N N 191
KVI C35 C N R 192
KVI O9 O N N 193
KVI C36 C N N 194
KVI N8 N N N 195
KVI C14 C N S 196
KVI C15 C N N 197
KVI O5 O N N 198
KVI C16 C N S 199
KVI C17 C N N 200
KVI C18 C N N 201
KVI C19 C N N 202
KVI N9 N N N 203
KVI C20 C N S 204
KVI C21 C N N 205
KVI C22 C N N 206
KVI C23 C N N 207
KVI C24 C N N 208
KVI C25 C N N 209
KVI O6 O N N 210
KVI C26 C N N 211
KVI C27 C N R 212
KVI C28 C N N 213
KVI C29 C N N 214
KVI C30 C N N 215
KVI C31 C N N 216
KVI C32 C N N 217
KVI O7 O N N 218
KVI N6 N N N 219
KVI C9 C N S 220
KVI C10 C N N 221
KVI O3 O N N 222
KVI C11 C N N 223
KVI C12 C N N 224
KVI C13 C N N 225
KVI O4 O N N 226
KVI N7 N N N 227
KVI N1 N N N 228
KVI C1 C N S 229
KVI C6 C N N 230
KVI O1 O N N 231
KVI C2 C N N 232
KVI C3 C N N 233
KVI C4 C N N 234
KVI N2 N N N 235
KVI C5 C N N 236
KVI N4 N N N 237
KVI N3 N N N 238
KVI N5 N N N 239
KVI H32 H N N 240
KVI H33 H N N 241
KVI H34 H N N 242
KVI H9 H N N 243
KVI H61 H N N 244
KVI H62 H N N 245
KVI H63 H N N 246
KVI H64 H N N 247
KVI H65 H N N 248
KVI H66 H N N 249
KVI H40 H N N 250
KVI H41 H N N 251
KVI H12 H N N 252
KVI H13 H N N 253
KVI H14 H N N 254
KVI H15 H N N 255
KVI H16 H N N 256
KVI H17 H N N 257
KVI H42 H N N 258
KVI H43 H N N 259
KVI H44 H N N 260
KVI H45 H N N 261
KVI H18 H N N 262
KVI H19 H N N 263
KVI H20 H N N 264
KVI H21 H N N 265
KVI H22 H N N 266
KVI H46 H N N 267
KVI H47 H N N 268
KVI H48 H N N 269
KVI H49 H N N 270
KVI H50 H N N 271
KVI H23 H N N 272
KVI H24 H N N 273
KVI H51 H N N 274
KVI H52 H N N 275
KVI H53 H N N 276
KVI H54 H N N 277
KVI H55 H N N 278
KVI H56 H N N 279
KVI H57 H N N 280
KVI H58 H N N 281
KVI H59 H N N 282
KVI H60 H N N 283
KVI H35 H N N 284
KVI H8 H N N 285
KVI H10 H N N 286
KVI H11 H N N 287
KVI H36 H N N 288
KVI H37 H N N 289
KVI H38 H N N 290
KVI H39 H N N 291
KVI H25 H N N 292
KVI H1 H N N 293
KVI H2 H N N 294
KVI H3 H N N 295
KVI H4 H N N 296
KVI H5 H N N 297
KVI H6 H N N 298
KVI H7 H N N 299
KVI H26 H N N 300
KVI H28 H N N 301
KVI H29 H N N 302
KVI H27 H N N 303
KVI H30 H N N 304
KVI H31 H N N 305
LEU N N N N 306
LEU CA C N S 307
LEU C C N N 308
LEU O O N N 309
LEU CB C N N 310
LEU CG C N N 311
LEU CD1 C N N 312
LEU CD2 C N N 313
LEU OXT O N N 314
LEU H H N N 315
LEU H2 H N N 316
LEU HA H N N 317
LEU HB2 H N N 318
LEU HB3 H N N 319
LEU HG H N N 320
LEU HD11 H N N 321
LEU HD12 H N N 322
LEU HD13 H N N 323
LEU HD21 H N N 324
LEU HD22 H N N 325
LEU HD23 H N N 326
LEU HXT H N N 327
LYS N N N N 328
LYS CA C N S 329
LYS C C N N 330
LYS O O N N 331
LYS CB C N N 332
LYS CG C N N 333
LYS CD C N N 334
LYS CE C N N 335
LYS NZ N N N 336
LYS OXT O N N 337
LYS H H N N 338
LYS H2 H N N 339
LYS HA H N N 340
LYS HB2 H N N 341
LYS HB3 H N N 342
LYS HG2 H N N 343
LYS HG3 H N N 344
LYS HD2 H N N 345
LYS HD3 H N N 346
LYS HE2 H N N 347
LYS HE3 H N N 348
LYS HZ1 H N N 349
LYS HZ2 H N N 350
LYS HZ3 H N N 351
LYS HXT H N N 352
NLE N N N N 353
NLE CA C N S 354
NLE C C N N 355
NLE O O N N 356
NLE OXT O N N 357
NLE CB C N N 358
NLE CG C N N 359
NLE CD C N N 360
NLE CE C N N 361
NLE H H N N 362
NLE H2 H N N 363
NLE HA H N N 364
NLE HXT H N N 365
NLE HB2 H N N 366
NLE HB3 H N N 367
NLE HG2 H N N 368
NLE HG3 H N N 369
NLE HD2 H N N 370
NLE HD3 H N N 371
NLE HE1 H N N 372
NLE HE2 H N N 373
NLE HE3 H N N 374
PHE N N N N 375
PHE CA C N S 376
PHE C C N N 377
PHE O O N N 378
PHE CB C N N 379
PHE CG C Y N 380
PHE CD1 C Y N 381
PHE CD2 C Y N 382
PHE CE1 C Y N 383
PHE CE2 C Y N 384
PHE CZ C Y N 385
PHE OXT O N N 386
PHE H H N N 387
PHE H2 H N N 388
PHE HA H N N 389
PHE HB2 H N N 390
PHE HB3 H N N 391
PHE HD1 H N N 392
PHE HD2 H N N 393
PHE HE1 H N N 394
PHE HE2 H N N 395
PHE HZ H N N 396
PHE HXT H N N 397
PRO N N N N 398
PRO CA C N S 399
PRO C C N N 400
PRO O O N N 401
PRO CB C N N 402
PRO CG C N N 403
PRO CD C N N 404
PRO OXT O N N 405
PRO H H N N 406
PRO HA H N N 407
PRO HB2 H N N 408
PRO HB3 H N N 409
PRO HG2 H N N 410
PRO HG3 H N N 411
PRO HD2 H N N 412
PRO HD3 H N N 413
PRO HXT H N N 414
THR N N N N 415
THR CA C N S 416
THR C C N N 417
THR O O N N 418
THR CB C N R 419
THR OG1 O N N 420
THR CG2 C N N 421
THR OXT O N N 422
THR H H N N 423
THR H2 H N N 424
THR HA H N N 425
THR HB H N N 426
THR HG1 H N N 427
THR HG21 H N N 428
THR HG22 H N N 429
THR HG23 H N N 430
THR HXT H N N 431
TRP N N N N 432
TRP CA C N S 433
TRP C C N N 434
TRP O O N N 435
TRP CB C N N 436
TRP CG C Y N 437
TRP CD1 C Y N 438
TRP CD2 C Y N 439
TRP NE1 N Y N 440
TRP CE2 C Y N 441
TRP CE3 C Y N 442
TRP CZ2 C Y N 443
TRP CZ3 C Y N 444
TRP CH2 C Y N 445
TRP OXT O N N 446
TRP H H N N 447
TRP H2 H N N 448
TRP HA H N N 449
TRP HB2 H N N 450
TRP HB3 H N N 451
TRP HD1 H N N 452
TRP HE1 H N N 453
TRP HE3 H N N 454
TRP HZ2 H N N 455
TRP HZ3 H N N 456
TRP HH2 H N N 457
TRP HXT H N N 458
TYR N N N N 459
TYR CA C N S 460
TYR C C N N 461
TYR O O N N 462
TYR CB C N N 463
TYR CG C Y N 464
TYR CD1 C Y N 465
TYR CD2 C Y N 466
TYR CE1 C Y N 467
TYR CE2 C Y N 468
TYR CZ C Y N 469
TYR OH O N N 470
TYR OXT O N N 471
TYR H H N N 472
TYR H2 H N N 473
TYR HA H N N 474
TYR HB2 H N N 475
TYR HB3 H N N 476
TYR HD1 H N N 477
TYR HD2 H N N 478
TYR HE1 H N N 479
TYR HE2 H N N 480
TYR HH H N N 481
TYR HXT H N N 482
VAL N N N N 483
VAL CA C N S 484
VAL C C N N 485
VAL O O N N 486
VAL CB C N N 487
VAL CG1 C N N 488
VAL CG2 C N N 489
VAL OXT O N N 490
VAL H H N N 491
VAL H2 H N N 492
VAL HA H N N 493
VAL HB H N N 494
VAL HG11 H N N 495
VAL HG12 H N N 496
VAL HG13 H N N 497
VAL HG21 H N N 498
VAL HG22 H N N 499
VAL HG23 H N N 500
VAL HXT H N N 501
YCM N N N N 502
YCM CA C N R 503
YCM CB C N N 504
YCM SG S N N 505
YCM CD C N N 506
YCM CE C N N 507
YCM OZ1 O N N 508
YCM NZ2 N N N 509
YCM C C N N 510
YCM O O N N 511
YCM OXT O N N 512
YCM H H N N 513
YCM H2 H N N 514
YCM HA H N N 515
YCM HB2 H N N 516
YCM HB3 H N N 517
YCM HD2 H N N 518
YCM HD3 H N N 519
YCM HZ21 H N N 520
YCM HZ22 H N N 521
YCM HXT H N N 522
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ABA N CA sing N N 1
ABA N H sing N N 2
ABA N H2 sing N N 3
ABA CA C sing N N 4
ABA CA CB sing N N 5
ABA CA HA sing N N 6
ABA C O doub N N 7
ABA C OXT sing N N 8
ABA CB CG sing N N 9
ABA CB HB3 sing N N 10
ABA CB HB2 sing N N 11
ABA CG HG1 sing N N 12
ABA CG HG3 sing N N 13
ABA CG HG2 sing N N 14
ABA OXT HXT sing N N 15
ALA N CA sing N N 16
ALA N H sing N N 17
ALA N H2 sing N N 18
ALA CA C sing N N 19
ALA CA CB sing N N 20
ALA CA HA sing N N 21
ALA C O doub N N 22
ALA C OXT sing N N 23
ALA CB HB1 sing N N 24
ALA CB HB2 sing N N 25
ALA CB HB3 sing N N 26
ALA OXT HXT sing N N 27
ARG N CA sing N N 28
ARG N H sing N N 29
ARG N H2 sing N N 30
ARG CA C sing N N 31
ARG CA CB sing N N 32
ARG CA HA sing N N 33
ARG C O doub N N 34
ARG C OXT sing N N 35
ARG CB CG sing N N 36
ARG CB HB2 sing N N 37
ARG CB HB3 sing N N 38
ARG CG CD sing N N 39
ARG CG HG2 sing N N 40
ARG CG HG3 sing N N 41
ARG CD NE sing N N 42
ARG CD HD2 sing N N 43
ARG CD HD3 sing N N 44
ARG NE CZ sing N N 45
ARG NE HE sing N N 46
ARG CZ NH1 sing N N 47
ARG CZ NH2 doub N N 48
ARG NH1 HH11 sing N N 49
ARG NH1 HH12 sing N N 50
ARG NH2 HH21 sing N N 51
ARG NH2 HH22 sing N N 52
ARG OXT HXT sing N N 53
ASN N CA sing N N 54
ASN N H sing N N 55
ASN N H2 sing N N 56
ASN CA C sing N N 57
ASN CA CB sing N N 58
ASN CA HA sing N N 59
ASN C O doub N N 60
ASN C OXT sing N N 61
ASN CB CG sing N N 62
ASN CB HB2 sing N N 63
ASN CB HB3 sing N N 64
ASN CG OD1 doub N N 65
ASN CG ND2 sing N N 66
ASN ND2 HD21 sing N N 67
ASN ND2 HD22 sing N N 68
ASN OXT HXT sing N N 69
ASP N CA sing N N 70
ASP N H sing N N 71
ASP N H2 sing N N 72
ASP CA C sing N N 73
ASP CA CB sing N N 74
ASP CA HA sing N N 75
ASP C O doub N N 76
ASP C OXT sing N N 77
ASP CB CG sing N N 78
ASP CB HB2 sing N N 79
ASP CB HB3 sing N N 80
ASP CG OD1 doub N N 81
ASP CG OD2 sing N N 82
ASP OD2 HD2 sing N N 83
ASP OXT HXT sing N N 84
GLN N CA sing N N 85
GLN N H sing N N 86
GLN N H2 sing N N 87
GLN CA C sing N N 88
GLN CA CB sing N N 89
GLN CA HA sing N N 90
GLN C O doub N N 91
GLN C OXT sing N N 92
GLN CB CG sing N N 93
GLN CB HB2 sing N N 94
GLN CB HB3 sing N N 95
GLN CG CD sing N N 96
GLN CG HG2 sing N N 97
GLN CG HG3 sing N N 98
GLN CD OE1 doub N N 99
GLN CD NE2 sing N N 100
GLN NE2 HE21 sing N N 101
GLN NE2 HE22 sing N N 102
GLN OXT HXT sing N N 103
GLU N CA sing N N 104
GLU N H sing N N 105
GLU N H2 sing N N 106
GLU CA C sing N N 107
GLU CA CB sing N N 108
GLU CA HA sing N N 109
GLU C O doub N N 110
GLU C OXT sing N N 111
GLU CB CG sing N N 112
GLU CB HB2 sing N N 113
GLU CB HB3 sing N N 114
GLU CG CD sing N N 115
GLU CG HG2 sing N N 116
GLU CG HG3 sing N N 117
GLU CD OE1 doub N N 118
GLU CD OE2 sing N N 119
GLU OE2 HE2 sing N N 120
GLU OXT HXT sing N N 121
GLY N CA sing N N 122
GLY N H sing N N 123
GLY N H2 sing N N 124
GLY CA C sing N N 125
GLY CA HA2 sing N N 126
GLY CA HA3 sing N N 127
GLY C O doub N N 128
GLY C OXT sing N N 129
GLY OXT HXT sing N N 130
HIS N CA sing N N 131
HIS N H sing N N 132
HIS N H2 sing N N 133
HIS CA C sing N N 134
HIS CA CB sing N N 135
HIS CA HA sing N N 136
HIS C O doub N N 137
HIS C OXT sing N N 138
HIS CB CG sing N N 139
HIS CB HB2 sing N N 140
HIS CB HB3 sing N N 141
HIS CG ND1 sing Y N 142
HIS CG CD2 doub Y N 143
HIS ND1 CE1 doub Y N 144
HIS ND1 HD1 sing N N 145
HIS CD2 NE2 sing Y N 146
HIS CD2 HD2 sing N N 147
HIS CE1 NE2 sing Y N 148
HIS CE1 HE1 sing N N 149
HIS NE2 HE2 sing N N 150
HIS OXT HXT sing N N 151
HOH O H1 sing N N 152
HOH O H2 sing N N 153
ILE N CA sing N N 154
ILE N H sing N N 155
ILE N H2 sing N N 156
ILE CA C sing N N 157
ILE CA CB sing N N 158
ILE CA HA sing N N 159
ILE C O doub N N 160
ILE C OXT sing N N 161
ILE CB CG1 sing N N 162
ILE CB CG2 sing N N 163
ILE CB HB sing N N 164
ILE CG1 CD1 sing N N 165
ILE CG1 HG12 sing N N 166
ILE CG1 HG13 sing N N 167
ILE CG2 HG21 sing N N 168
ILE CG2 HG22 sing N N 169
ILE CG2 HG23 sing N N 170
ILE CD1 HD11 sing N N 171
ILE CD1 HD12 sing N N 172
ILE CD1 HD13 sing N N 173
ILE OXT HXT sing N N 174
KVI C36 C35 sing N N 175
KVI O8 C34 doub N N 176
KVI C35 C33 sing N N 177
KVI C35 O9 sing N N 178
KVI C33 C34 sing N N 179
KVI C33 N10 sing N N 180
KVI C34 N8 sing N N 181
KVI C19 C17 sing N N 182
KVI O2 C7 doub N N 183
KVI N10 C7 sing N N 184
KVI C22 C21 sing N N 185
KVI C22 C23 sing N N 186
KVI C7 C8 sing N N 187
KVI N8 C14 sing N N 188
KVI C21 C20 sing N N 189
KVI N9 C20 sing N N 190
KVI N9 C15 sing N N 191
KVI C14 C15 sing N N 192
KVI C14 C16 sing N N 193
KVI C17 C16 sing N N 194
KVI C23 C24 sing N N 195
KVI C20 C25 sing N N 196
KVI C15 O5 doub N N 197
KVI C16 C18 sing N N 198
KVI O6 C25 doub N N 199
KVI C25 C26 sing N N 200
KVI C26 C27 sing N N 201
KVI C27 C28 sing N N 202
KVI C27 C32 sing N N 203
KVI C28 C29 sing N N 204
KVI C32 N6 sing N N 205
KVI C32 O7 doub N N 206
KVI N6 C9 sing N N 207
KVI C29 C30 sing N N 208
KVI C11 C9 sing N N 209
KVI C11 C12 sing N N 210
KVI O4 C13 doub N N 211
KVI O3 C10 doub N N 212
KVI C9 C10 sing N N 213
KVI C12 C13 sing N N 214
KVI C13 N7 sing N N 215
KVI C10 N1 sing N N 216
KVI C30 C31 sing N N 217
KVI N1 C1 sing N N 218
KVI C1 C6 sing N N 219
KVI C1 C2 sing N N 220
KVI N5 C6 sing N N 221
KVI C6 O1 doub N N 222
KVI C2 C3 sing N N 223
KVI C3 C4 sing N N 224
KVI C4 N2 sing N N 225
KVI N3 C5 doub N N 226
KVI N2 C5 sing N N 227
KVI C5 N4 sing N N 228
KVI C1 H1 sing N N 229
KVI C2 H2 sing N N 230
KVI C2 H3 sing N N 231
KVI C3 H4 sing N N 232
KVI C3 H5 sing N N 233
KVI C4 H6 sing N N 234
KVI C4 H7 sing N N 235
KVI C9 H8 sing N N 236
KVI N10 H9 sing N N 237
KVI C11 H10 sing N N 238
KVI C11 H11 sing N N 239
KVI C16 H12 sing N N 240
KVI C17 H13 sing N N 241
KVI C17 H14 sing N N 242
KVI C18 H15 sing N N 243
KVI C18 H16 sing N N 244
KVI C18 H17 sing N N 245
KVI C20 H18 sing N N 246
KVI C21 H19 sing N N 247
KVI C21 H20 sing N N 248
KVI C22 H21 sing N N 249
KVI C22 H22 sing N N 250
KVI C26 H23 sing N N 251
KVI C26 H24 sing N N 252
KVI N1 H25 sing N N 253
KVI N2 H26 sing N N 254
KVI N3 H27 sing N N 255
KVI N4 H28 sing N N 256
KVI N4 H29 sing N N 257
KVI N5 H30 sing N N 258
KVI N5 H31 sing N N 259
KVI C8 H32 sing N N 260
KVI C8 H33 sing N N 261
KVI C8 H34 sing N N 262
KVI N6 H35 sing N N 263
KVI C12 H36 sing N N 264
KVI C12 H37 sing N N 265
KVI N7 H38 sing N N 266
KVI N7 H39 sing N N 267
KVI N8 H40 sing N N 268
KVI C14 H41 sing N N 269
KVI C19 H42 sing N N 270
KVI C19 H43 sing N N 271
KVI C19 H44 sing N N 272
KVI N9 H45 sing N N 273
KVI C23 H46 sing N N 274
KVI C23 H47 sing N N 275
KVI C24 H48 sing N N 276
KVI C24 H49 sing N N 277
KVI C24 H50 sing N N 278
KVI C27 H51 sing N N 279
KVI C28 H52 sing N N 280
KVI C28 H53 sing N N 281
KVI C29 H54 sing N N 282
KVI C29 H55 sing N N 283
KVI C30 H56 sing N N 284
KVI C30 H57 sing N N 285
KVI C31 H58 sing N N 286
KVI C31 H59 sing N N 287
KVI C31 H60 sing N N 288
KVI C33 H61 sing N N 289
KVI C35 H62 sing N N 290
KVI O9 H63 sing N N 291
KVI C36 H64 sing N N 292
KVI C36 H65 sing N N 293
KVI C36 H66 sing N N 294
LEU N CA sing N N 295
LEU N H sing N N 296
LEU N H2 sing N N 297
LEU CA C sing N N 298
LEU CA CB sing N N 299
LEU CA HA sing N N 300
LEU C O doub N N 301
LEU C OXT sing N N 302
LEU CB CG sing N N 303
LEU CB HB2 sing N N 304
LEU CB HB3 sing N N 305
LEU CG CD1 sing N N 306
LEU CG CD2 sing N N 307
LEU CG HG sing N N 308
LEU CD1 HD11 sing N N 309
LEU CD1 HD12 sing N N 310
LEU CD1 HD13 sing N N 311
LEU CD2 HD21 sing N N 312
LEU CD2 HD22 sing N N 313
LEU CD2 HD23 sing N N 314
LEU OXT HXT sing N N 315
LYS N CA sing N N 316
LYS N H sing N N 317
LYS N H2 sing N N 318
LYS CA C sing N N 319
LYS CA CB sing N N 320
LYS CA HA sing N N 321
LYS C O doub N N 322
LYS C OXT sing N N 323
LYS CB CG sing N N 324
LYS CB HB2 sing N N 325
LYS CB HB3 sing N N 326
LYS CG CD sing N N 327
LYS CG HG2 sing N N 328
LYS CG HG3 sing N N 329
LYS CD CE sing N N 330
LYS CD HD2 sing N N 331
LYS CD HD3 sing N N 332
LYS CE NZ sing N N 333
LYS CE HE2 sing N N 334
LYS CE HE3 sing N N 335
LYS NZ HZ1 sing N N 336
LYS NZ HZ2 sing N N 337
LYS NZ HZ3 sing N N 338
LYS OXT HXT sing N N 339
NLE N CA sing N N 340
NLE N H sing N N 341
NLE N H2 sing N N 342
NLE CA C sing N N 343
NLE CA CB sing N N 344
NLE CA HA sing N N 345
NLE C O doub N N 346
NLE C OXT sing N N 347
NLE OXT HXT sing N N 348
NLE CB CG sing N N 349
NLE CB HB2 sing N N 350
NLE CB HB3 sing N N 351
NLE CG CD sing N N 352
NLE CG HG2 sing N N 353
NLE CG HG3 sing N N 354
NLE CD CE sing N N 355
NLE CD HD2 sing N N 356
NLE CD HD3 sing N N 357
NLE CE HE1 sing N N 358
NLE CE HE2 sing N N 359
NLE CE HE3 sing N N 360
PHE N CA sing N N 361
PHE N H sing N N 362
PHE N H2 sing N N 363
PHE CA C sing N N 364
PHE CA CB sing N N 365
PHE CA HA sing N N 366
PHE C O doub N N 367
PHE C OXT sing N N 368
PHE CB CG sing N N 369
PHE CB HB2 sing N N 370
PHE CB HB3 sing N N 371
PHE CG CD1 doub Y N 372
PHE CG CD2 sing Y N 373
PHE CD1 CE1 sing Y N 374
PHE CD1 HD1 sing N N 375
PHE CD2 CE2 doub Y N 376
PHE CD2 HD2 sing N N 377
PHE CE1 CZ doub Y N 378
PHE CE1 HE1 sing N N 379
PHE CE2 CZ sing Y N 380
PHE CE2 HE2 sing N N 381
PHE CZ HZ sing N N 382
PHE OXT HXT sing N N 383
PRO N CA sing N N 384
PRO N CD sing N N 385
PRO N H sing N N 386
PRO CA C sing N N 387
PRO CA CB sing N N 388
PRO CA HA sing N N 389
PRO C O doub N N 390
PRO C OXT sing N N 391
PRO CB CG sing N N 392
PRO CB HB2 sing N N 393
PRO CB HB3 sing N N 394
PRO CG CD sing N N 395
PRO CG HG2 sing N N 396
PRO CG HG3 sing N N 397
PRO CD HD2 sing N N 398
PRO CD HD3 sing N N 399
PRO OXT HXT sing N N 400
THR N CA sing N N 401
THR N H sing N N 402
THR N H2 sing N N 403
THR CA C sing N N 404
THR CA CB sing N N 405
THR CA HA sing N N 406
THR C O doub N N 407
THR C OXT sing N N 408
THR CB OG1 sing N N 409
THR CB CG2 sing N N 410
THR CB HB sing N N 411
THR OG1 HG1 sing N N 412
THR CG2 HG21 sing N N 413
THR CG2 HG22 sing N N 414
THR CG2 HG23 sing N N 415
THR OXT HXT sing N N 416
TRP N CA sing N N 417
TRP N H sing N N 418
TRP N H2 sing N N 419
TRP CA C sing N N 420
TRP CA CB sing N N 421
TRP CA HA sing N N 422
TRP C O doub N N 423
TRP C OXT sing N N 424
TRP CB CG sing N N 425
TRP CB HB2 sing N N 426
TRP CB HB3 sing N N 427
TRP CG CD1 doub Y N 428
TRP CG CD2 sing Y N 429
TRP CD1 NE1 sing Y N 430
TRP CD1 HD1 sing N N 431
TRP CD2 CE2 doub Y N 432
TRP CD2 CE3 sing Y N 433
TRP NE1 CE2 sing Y N 434
TRP NE1 HE1 sing N N 435
TRP CE2 CZ2 sing Y N 436
TRP CE3 CZ3 doub Y N 437
TRP CE3 HE3 sing N N 438
TRP CZ2 CH2 doub Y N 439
TRP CZ2 HZ2 sing N N 440
TRP CZ3 CH2 sing Y N 441
TRP CZ3 HZ3 sing N N 442
TRP CH2 HH2 sing N N 443
TRP OXT HXT sing N N 444
TYR N CA sing N N 445
TYR N H sing N N 446
TYR N H2 sing N N 447
TYR CA C sing N N 448
TYR CA CB sing N N 449
TYR CA HA sing N N 450
TYR C O doub N N 451
TYR C OXT sing N N 452
TYR CB CG sing N N 453
TYR CB HB2 sing N N 454
TYR CB HB3 sing N N 455
TYR CG CD1 doub Y N 456
TYR CG CD2 sing Y N 457
TYR CD1 CE1 sing Y N 458
TYR CD1 HD1 sing N N 459
TYR CD2 CE2 doub Y N 460
TYR CD2 HD2 sing N N 461
TYR CE1 CZ doub Y N 462
TYR CE1 HE1 sing N N 463
TYR CE2 CZ sing Y N 464
TYR CE2 HE2 sing N N 465
TYR CZ OH sing N N 466
TYR OH HH sing N N 467
TYR OXT HXT sing N N 468
VAL N CA sing N N 469
VAL N H sing N N 470
VAL N H2 sing N N 471
VAL CA C sing N N 472
VAL CA CB sing N N 473
VAL CA HA sing N N 474
VAL C O doub N N 475
VAL C OXT sing N N 476
VAL CB CG1 sing N N 477
VAL CB CG2 sing N N 478
VAL CB HB sing N N 479
VAL CG1 HG11 sing N N 480
VAL CG1 HG12 sing N N 481
VAL CG1 HG13 sing N N 482
VAL CG2 HG21 sing N N 483
VAL CG2 HG22 sing N N 484
VAL CG2 HG23 sing N N 485
VAL OXT HXT sing N N 486
YCM N CA sing N N 487
YCM N H sing N N 488
YCM N H2 sing N N 489
YCM CA CB sing N N 490
YCM CA C sing N N 491
YCM CA HA sing N N 492
YCM CB SG sing N N 493
YCM CB HB2 sing N N 494
YCM CB HB3 sing N N 495
YCM SG CD sing N N 496
YCM CD CE sing N N 497
YCM CD HD2 sing N N 498
YCM CD HD3 sing N N 499
YCM CE OZ1 doub N N 500
YCM CE NZ2 sing N N 501
YCM NZ2 HZ21 sing N N 502
YCM NZ2 HZ22 sing N N 503
YCM C O doub N N 504
YCM C OXT sing N N 505
YCM OXT HXT sing N N 506
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 4HVP
_pdbx_initial_refinement_model.details 'PDB ENTRY 4HVP'
#
_atom_sites.entry_id 3DCK
_atom_sites.fract_transf_matrix[1][1] 0.019597
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.017079
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.016238
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_