data_3DCK # _entry.id 3DCK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DCK pdb_00003dck 10.2210/pdb3dck/pdb RCSB RCSB047868 ? ? WWPDB D_1000047868 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-08-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2013-10-16 4 'Structure model' 1 3 2017-10-25 5 'Structure model' 1 4 2023-11-01 6 'Structure model' 1 5 2023-11-15 7 'Structure model' 1 6 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Non-polymer description' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Refinement description' 9 6 'Structure model' 'Data collection' 10 7 'Structure model' 'Source and taxonomy' 11 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_sheet 8 5 'Structure model' struct_site 9 6 'Structure model' chem_comp_atom 10 6 'Structure model' chem_comp_bond 11 7 'Structure model' entity 12 7 'Structure model' pdbx_entity_src_syn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_sheet.number_strands' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 8 6 'Structure model' '_chem_comp_atom.atom_id' 9 6 'Structure model' '_chem_comp_bond.atom_id_2' 10 7 'Structure model' '_entity.details' # _pdbx_database_status.entry_id 3DCK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-06-03 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3DCR _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Torbeev, V.Y.' 1 'Mandal, K.' 2 'Terechko, V.A.' 3 'Kent, S.B.H.' 4 # _citation.id primary _citation.title 'Crystal structure of chemically synthesized HIV-1 protease and a ketomethylene isostere inhibitor based on the p2/NC cleavage site' _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 18 _citation.page_first 4554 _citation.page_last 4557 _citation.year 2008 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 0960-894X _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18657969 _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2008.07.039 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Torbeev, V.Y.' 1 ? primary 'Mandal, K.' 2 ? primary 'Terechko, V.A.' 3 ? primary 'Kent, S.B.H.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Chemical analogue HIV-1 protease' 10759.640 2 3.4.23.16 D25N 'HIV-1 protease' ? 2 non-polymer syn ;(2S)-2-{[(2R,5S)-5-{[(2S,3S)-2-{[(2S,3R)-2-(acetylamino)-3-hydroxybutanoyl]amino}-3-methylpentanoyl]amino}-2-butyl-4-oxononanoyl]amino}-N~1~-[(2S)-1-amino-5-carbamimidamido-1-oxopentan-2-yl]pentanediamide ; 782.971 1 ? ? ? 'The peptide inhibitor was chemically synthesized' 3 water nat water 18.015 83 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;PQITLWKRPLVTIRIGGQLKEALLNTGADDTVIEE(NLE)NLPG(YCM)WKPK(NLE)IGGIGGFIKVRQYDQIPVEI (ABA)GHKAIGTVLVGPTPVNIIGRNLLTQIG(ABA)TLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWKRPLVTIRIGGQLKEALLNTGADDTVIEELNLPGCWKPKLIGGIGGFIKVRQYDQIPVEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2S)-2-{[(2R,5S)-5-{[(2S,3S)-2-{[(2S,3R)-2-(acetylamino)-3-hydroxybutanoyl]amino}-3-methylpentanoyl]amino}-2-butyl-4-oxononanoyl]amino}-N~1~-[(2S)-1-amino-5-carbamimidamido-1-oxopentan-2-yl]pentanediamide ; KVI 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 ARG n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASN n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 ILE n 1 34 GLU n 1 35 GLU n 1 36 NLE n 1 37 ASN n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 YCM n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 NLE n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 PRO n 1 64 VAL n 1 65 GLU n 1 66 ILE n 1 67 ABA n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 ABA n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'total chemical protein synthesis using solid phase peptide synthesis and native chemical ligation' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ABA 'L-peptide linking' n 'ALPHA-AMINOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KVI peptide-like . ;(2S)-2-{[(2R,5S)-5-{[(2S,3S)-2-{[(2S,3R)-2-(acetylamino)-3-hydroxybutanoyl]amino}-3-methylpentanoyl]amino}-2-butyl-4-oxononanoyl]amino}-N~1~-[(2S)-1-amino-5-carbamimidamido-1-oxopentan-2-yl]pentanediamide ; ? 'C36 H66 N10 O9' 782.971 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NLE 'L-peptide linking' n NORLEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YCM 'L-peptide linking' n 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' CYSTEINE-S-ACETAMIDE 'C5 H10 N2 O3 S' 178.209 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 NLE 36 36 36 NLE NLE A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 YCM 41 41 41 YCM YCM A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 NLE 46 46 46 NLE NLE A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 ABA 67 67 67 ABA ABA A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ABA 95 95 95 ABA ABA A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 THR 4 4 4 THR THR B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ASN 25 25 25 ASN ASN B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 NLE 36 36 36 NLE NLE B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 YCM 41 41 41 YCM YCM B . n B 1 42 TRP 42 42 42 TRP TRP B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 NLE 46 46 46 NLE NLE B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 PRO 63 63 63 PRO PRO B . n B 1 64 VAL 64 64 64 VAL VAL B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 ABA 67 67 67 ABA ABA B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 HIS 69 69 69 HIS HIS B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 ABA 95 95 95 ABA ABA B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 PHE 99 99 99 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 KVI 1 101 0 KVI ACE B . D 3 HOH 1 101 2 HOH HOH A . D 3 HOH 2 102 7 HOH HOH A . D 3 HOH 3 103 8 HOH HOH A . D 3 HOH 4 104 9 HOH HOH A . D 3 HOH 5 105 12 HOH HOH A . D 3 HOH 6 106 15 HOH HOH A . D 3 HOH 7 107 16 HOH HOH A . D 3 HOH 8 108 18 HOH HOH A . D 3 HOH 9 109 22 HOH HOH A . D 3 HOH 10 110 24 HOH HOH A . D 3 HOH 11 111 25 HOH HOH A . D 3 HOH 12 112 26 HOH HOH A . D 3 HOH 13 113 27 HOH HOH A . D 3 HOH 14 114 30 HOH HOH A . D 3 HOH 15 115 31 HOH HOH A . D 3 HOH 16 116 34 HOH HOH A . D 3 HOH 17 117 35 HOH HOH A . D 3 HOH 18 118 44 HOH HOH A . D 3 HOH 19 119 45 HOH HOH A . D 3 HOH 20 120 47 HOH HOH A . D 3 HOH 21 121 49 HOH HOH A . D 3 HOH 22 122 50 HOH HOH A . D 3 HOH 23 123 57 HOH HOH A . D 3 HOH 24 124 60 HOH HOH A . D 3 HOH 25 125 62 HOH HOH A . D 3 HOH 26 126 63 HOH HOH A . D 3 HOH 27 127 64 HOH HOH A . D 3 HOH 28 128 65 HOH HOH A . D 3 HOH 29 129 66 HOH HOH A . D 3 HOH 30 130 67 HOH HOH A . D 3 HOH 31 131 68 HOH HOH A . D 3 HOH 32 132 69 HOH HOH A . D 3 HOH 33 133 70 HOH HOH A . D 3 HOH 34 134 71 HOH HOH A . D 3 HOH 35 135 74 HOH HOH A . D 3 HOH 36 136 75 HOH HOH A . D 3 HOH 37 137 76 HOH HOH A . D 3 HOH 38 138 80 HOH HOH A . D 3 HOH 39 139 10 HOH HOH A . D 3 HOH 40 140 53 HOH HOH A . E 3 HOH 1 201 54 HOH HOH B . E 3 HOH 2 202 81 HOH HOH B . E 3 HOH 3 203 1 HOH HOH B . E 3 HOH 4 204 4 HOH HOH B . E 3 HOH 5 205 5 HOH HOH B . E 3 HOH 6 206 6 HOH HOH B . E 3 HOH 7 207 11 HOH HOH B . E 3 HOH 8 208 13 HOH HOH B . E 3 HOH 9 209 14 HOH HOH B . E 3 HOH 10 210 17 HOH HOH B . E 3 HOH 11 211 19 HOH HOH B . E 3 HOH 12 212 20 HOH HOH B . E 3 HOH 13 213 21 HOH HOH B . E 3 HOH 14 214 23 HOH HOH B . E 3 HOH 15 215 28 HOH HOH B . E 3 HOH 16 216 29 HOH HOH B . E 3 HOH 17 217 32 HOH HOH B . E 3 HOH 18 218 33 HOH HOH B . E 3 HOH 19 219 36 HOH HOH B . E 3 HOH 20 220 38 HOH HOH B . E 3 HOH 21 221 39 HOH HOH B . E 3 HOH 22 222 40 HOH HOH B . E 3 HOH 23 223 41 HOH HOH B . E 3 HOH 24 224 42 HOH HOH B . E 3 HOH 25 225 43 HOH HOH B . E 3 HOH 26 226 46 HOH HOH B . E 3 HOH 27 227 48 HOH HOH B . E 3 HOH 28 228 51 HOH HOH B . E 3 HOH 29 229 52 HOH HOH B . E 3 HOH 30 230 55 HOH HOH B . E 3 HOH 31 231 56 HOH HOH B . E 3 HOH 32 232 58 HOH HOH B . E 3 HOH 33 233 59 HOH HOH B . E 3 HOH 34 234 61 HOH HOH B . E 3 HOH 35 235 72 HOH HOH B . E 3 HOH 36 236 73 HOH HOH B . E 3 HOH 37 237 77 HOH HOH B . E 3 HOH 38 238 78 HOH HOH B . E 3 HOH 39 239 79 HOH HOH B . E 3 HOH 40 240 83 HOH HOH B . E 3 HOH 41 241 3 HOH HOH B . E 3 HOH 42 242 37 HOH HOH B . E 3 HOH 43 243 82 HOH HOH B . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 # _cell.length_a 51.028 _cell.length_b 58.551 _cell.length_c 61.584 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3DCK _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3DCK _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3DCK _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 40.47 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;0.1M CITRATE, 0.2M SODIUM PHOPHATE, 30% (W/V) AMMONIUM SULFATE, 10% (V/V) DMSO, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2007-06-07 _diffrn_detector.details 'Si(111) Double Crystal Monochrometer. Adjustable focusing mirrors in K-B geometry' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double crystal cryo-cooled Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97934 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-D # _reflns.entry_id 3DCK _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 7.8 _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 50.00 _reflns.number_all 17570 _reflns.number_obs 17428 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_Rsym_value 0.070 _reflns.pdbx_netI_over_sigmaI 31.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 98.6 _reflns_shell.Rmerge_I_obs 0.590 _reflns_shell.meanI_over_sigI_obs 3.9 _reflns_shell.pdbx_Rsym_value 0.495 _reflns_shell.pdbx_redundancy 7.9 _reflns_shell.number_unique_all 1708 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DCK _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.610 _refine.ls_number_reflns_obs 17373 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_obs 0.196 _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.223 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 882 _refine.B_iso_mean 24.053 _refine.aniso_B[1][1] -1.470 _refine.aniso_B[2][2] 1.780 _refine.aniso_B[3][3] -0.320 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.948 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.pdbx_overall_ESU_R 0.147 _refine.pdbx_overall_ESU_R_Free 0.130 _refine.overall_SU_ML 0.082 _refine.overall_SU_B 5.356 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB ENTRY 4HVP' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1518 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 55 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 1656 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1597 0.017 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2158 1.595 1.996 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 197 5.954 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 57 37.584 25.088 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 283 14.153 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8 22.400 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 254 0.118 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1132 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 662 0.257 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1060 0.314 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 80 0.163 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 34 0.173 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 3 0.187 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1035 1.048 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1633 1.648 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 633 2.514 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 525 4.185 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.801 _refine_ls_shell.d_res_low 1.848 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 89.250 _refine_ls_shell.number_reflns_R_work 1057 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.216 _refine_ls_shell.R_factor_R_free 0.310 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 72 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1129 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DCK _struct.title 'X-ray structure of D25N chemical analogue of HIV-1 protease complexed with ketomethylene isostere inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DCK _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'HIV-1 protease, homodimer, beta-turns, beta-strand, HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3DCK _struct_ref.pdbx_db_accession 3DCK _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DCK A 1 ? 99 ? 3DCK 1 ? 99 ? 1 99 2 1 3DCK B 1 ? 99 ? 3DCK 1 ? 99 ? 1 99 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4080 ? 1 MORE -22 ? 1 'SSA (A^2)' 9550 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6 HELX_P HELX_P2 2 GLY B 86 ? THR B 91 ? GLY B 86 THR B 91 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLU 35 C ? ? ? 1_555 A NLE 36 N ? ? A GLU 35 A NLE 36 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A NLE 36 C ? ? ? 1_555 A ASN 37 N ? ? A NLE 36 A ASN 37 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale3 covale both ? A GLY 40 C ? ? ? 1_555 A YCM 41 N ? ? A GLY 40 A YCM 41 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale4 covale both ? A YCM 41 C ? ? ? 1_555 A TRP 42 N ? ? A YCM 41 A TRP 42 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A LYS 45 C ? ? ? 1_555 A NLE 46 N ? ? A LYS 45 A NLE 46 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? A NLE 46 C ? ? ? 1_555 A ILE 47 N ? ? A NLE 46 A ILE 47 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale7 covale both ? A ILE 66 C ? ? ? 1_555 A ABA 67 N ? ? A ILE 66 A ABA 67 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale8 covale both ? A ABA 67 C ? ? ? 1_555 A GLY 68 N ? ? A ABA 67 A GLY 68 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale9 covale both ? A GLY 94 C ? ? ? 1_555 A ABA 95 N ? ? A GLY 94 A ABA 95 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale10 covale both ? A ABA 95 C ? ? ? 1_555 A THR 96 N ? ? A ABA 95 A THR 96 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale11 covale both ? B GLU 35 C ? ? ? 1_555 B NLE 36 N ? ? B GLU 35 B NLE 36 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale12 covale both ? B NLE 36 C ? ? ? 1_555 B ASN 37 N ? ? B NLE 36 B ASN 37 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale13 covale both ? B GLY 40 C ? ? ? 1_555 B YCM 41 N ? ? B GLY 40 B YCM 41 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale14 covale both ? B YCM 41 C ? ? ? 1_555 B TRP 42 N ? ? B YCM 41 B TRP 42 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale15 covale both ? B LYS 45 C ? ? ? 1_555 B NLE 46 N ? ? B LYS 45 B NLE 46 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale16 covale both ? B NLE 46 C ? ? ? 1_555 B ILE 47 N ? ? B NLE 46 B ILE 47 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale17 covale both ? B ILE 66 C ? ? ? 1_555 B ABA 67 N ? ? B ILE 66 B ABA 67 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale18 covale both ? B ABA 67 C ? ? ? 1_555 B GLY 68 N ? ? B ABA 67 B GLY 68 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale19 covale both ? B GLY 94 C ? ? ? 1_555 B ABA 95 N ? ? B GLY 94 B ABA 95 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale20 covale both ? B ABA 95 C ? ? ? 1_555 B THR 96 N ? ? B ABA 95 B THR 96 1_555 ? ? ? ? ? ? ? 1.344 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? ILE A 3 ? GLN A 2 ILE A 3 A 2 THR B 96 ? ASN B 98 ? THR B 96 ASN B 98 A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98 A 4 GLN B 2 ? ILE B 3 ? GLN B 2 ILE B 3 B 1 LYS A 43 ? GLY A 49 ? LYS A 43 GLY A 49 B 2 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 B 3 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77 B 4 VAL A 32 ? ILE A 33 ? VAL A 32 ILE A 33 B 5 ASN A 83 ? ILE A 85 ? ASN A 83 ILE A 85 B 6 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24 B 7 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 B 8 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 C 1 LYS B 43 ? GLY B 49 ? LYS B 43 GLY B 49 C 2 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 C 3 HIS B 69 ? VAL B 77 ? HIS B 69 VAL B 77 C 4 VAL B 32 ? ILE B 33 ? VAL B 32 ILE B 33 C 5 ILE B 84 ? ILE B 85 ? ILE B 84 ILE B 85 C 6 GLN B 18 ? LEU B 24 ? GLN B 18 LEU B 24 C 7 LEU B 10 ? ILE B 15 ? LEU B 10 ILE B 15 C 8 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 3 ? N ILE A 3 O LEU B 97 ? O LEU B 97 A 2 3 O THR B 96 ? O THR B 96 N ASN A 98 ? N ASN A 98 A 3 4 N LEU A 97 ? N LEU A 97 O ILE B 3 ? O ILE B 3 B 1 2 N LYS A 43 ? N LYS A 43 O GLN A 58 ? O GLN A 58 B 2 3 N ILE A 66 ? N ILE A 66 O HIS A 69 ? O HIS A 69 B 3 4 O LEU A 76 ? O LEU A 76 N ILE A 33 ? N ILE A 33 B 4 5 N VAL A 32 ? N VAL A 32 O ILE A 84 ? O ILE A 84 B 5 6 O ILE A 85 ? O ILE A 85 N LEU A 23 ? N LEU A 23 B 6 7 O LYS A 20 ? O LYS A 20 N ILE A 13 ? N ILE A 13 B 7 8 N ARG A 14 ? N ARG A 14 O GLU A 65 ? O GLU A 65 C 1 2 N LYS B 43 ? N LYS B 43 O GLN B 58 ? O GLN B 58 C 2 3 N ILE B 66 ? N ILE B 66 O HIS B 69 ? O HIS B 69 C 3 4 O LEU B 76 ? O LEU B 76 N ILE B 33 ? N ILE B 33 C 4 5 N VAL B 32 ? N VAL B 32 O ILE B 84 ? O ILE B 84 C 5 6 O ILE B 85 ? O ILE B 85 N LEU B 23 ? N LEU B 23 C 6 7 O LYS B 20 ? O LYS B 20 N ILE B 13 ? N ILE B 13 C 7 8 N ARG B 14 ? N ARG B 14 O GLU B 65 ? O GLU B 65 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id KVI _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 23 _struct_site.details 'BINDING SITE FOR RESIDUE KVI B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ARG A 8 ? ARG A 8 . ? 1_555 ? 2 AC1 23 ASN A 25 ? ASN A 25 . ? 1_555 ? 3 AC1 23 GLY A 27 ? GLY A 27 . ? 1_555 ? 4 AC1 23 ALA A 28 ? ALA A 28 . ? 1_555 ? 5 AC1 23 ASP A 29 ? ASP A 29 . ? 1_555 ? 6 AC1 23 ASP A 30 ? ASP A 30 . ? 1_555 ? 7 AC1 23 GLY A 48 ? GLY A 48 . ? 1_555 ? 8 AC1 23 GLY A 49 ? GLY A 49 . ? 1_555 ? 9 AC1 23 ASN B 25 ? ASN B 25 . ? 1_555 ? 10 AC1 23 GLY B 27 ? GLY B 27 . ? 1_555 ? 11 AC1 23 ALA B 28 ? ALA B 28 . ? 1_555 ? 12 AC1 23 ASP B 29 ? ASP B 29 . ? 1_555 ? 13 AC1 23 ASP B 30 ? ASP B 30 . ? 1_555 ? 14 AC1 23 ILE B 47 ? ILE B 47 . ? 1_555 ? 15 AC1 23 GLY B 48 ? GLY B 48 . ? 1_555 ? 16 AC1 23 GLY B 49 ? GLY B 49 . ? 1_555 ? 17 AC1 23 THR B 80 ? THR B 80 . ? 1_555 ? 18 AC1 23 PRO B 81 ? PRO B 81 . ? 1_555 ? 19 AC1 23 VAL B 82 ? VAL B 82 . ? 1_555 ? 20 AC1 23 HOH E . ? HOH B 204 . ? 1_555 ? 21 AC1 23 HOH E . ? HOH B 221 . ? 1_555 ? 22 AC1 23 HOH E . ? HOH B 241 . ? 1_555 ? 23 AC1 23 HOH E . ? HOH B 242 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 35 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -36.14 _pdbx_validate_torsion.psi 120.40 # _pdbx_molecule_features.prd_id PRD_001174 _pdbx_molecule_features.name ;(2S)-2-{[(2R,5S)-5-{[(2S,3S)-2-{[(2S,3R)-2-(ACETYLAMINO)-3-HYDROXYBUTANOYL]AMINO}-3-METHYLPENTANOYL]AMINO}-2-BUTYL-4-OXONONANOYL]AMINO}-N~1~-[(2S)-1-AMINO-5-CARBAMIMIDAMIDO-1-OXOPENTAN-2-YL]PENTANEDIAMIDE ; _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_001174 _pdbx_molecule.asym_id C # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A NLE 36 A NLE 36 ? LEU NORLEUCINE 2 A YCM 41 A YCM 41 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' 3 A NLE 46 A NLE 46 ? LEU NORLEUCINE 4 A ABA 67 A ABA 67 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 5 A ABA 95 A ABA 95 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 6 B NLE 36 B NLE 36 ? LEU NORLEUCINE 7 B YCM 41 B YCM 41 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' 8 B NLE 46 B NLE 46 ? LEU NORLEUCINE 9 B ABA 67 B ABA 67 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 10 B ABA 95 B ABA 95 ? ALA 'ALPHA-AMINOBUTYRIC ACID' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -4.9432 _pdbx_refine_tls.origin_y 1.2977 _pdbx_refine_tls.origin_z -18.2686 _pdbx_refine_tls.T[1][1] -0.0597 _pdbx_refine_tls.T[2][2] -0.0572 _pdbx_refine_tls.T[3][3] -0.0993 _pdbx_refine_tls.T[1][2] 0.0020 _pdbx_refine_tls.T[1][3] 0.0070 _pdbx_refine_tls.T[2][3] -0.0167 _pdbx_refine_tls.L[1][1] 2.7081 _pdbx_refine_tls.L[2][2] 1.6055 _pdbx_refine_tls.L[3][3] 1.2452 _pdbx_refine_tls.L[1][2] 0.6246 _pdbx_refine_tls.L[1][3] 0.3881 _pdbx_refine_tls.L[2][3] -0.6418 _pdbx_refine_tls.S[1][1] -0.0314 _pdbx_refine_tls.S[2][2] 0.0786 _pdbx_refine_tls.S[3][3] -0.0472 _pdbx_refine_tls.S[1][2] -0.0809 _pdbx_refine_tls.S[1][3] -0.0327 _pdbx_refine_tls.S[2][3] -0.0260 _pdbx_refine_tls.S[2][1] -0.0023 _pdbx_refine_tls.S[3][1] 0.0011 _pdbx_refine_tls.S[3][2] -0.1348 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A A 99 ? 1 A 1 A 99 'X-RAY DIFFRACTION' ? 2 1 B B 101 ? 101 C 0 C 5 'X-RAY DIFFRACTION' ? 3 1 B B 99 ? 1 B 1 B 99 'X-RAY DIFFRACTION' ? # _pdbx_entry_details.entry_id 3DCK _pdbx_entry_details.sequence_details ;SEQUENCE OF ENTITY 1 WAS BASED ON UNP DB CODE POL_HV1A2, ACCESSION P03369, RESIDUES 491-589. D25N OF THE SEQUENCE WAS A DESIGNED MUTATION TO THE DATABASE. ; _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ABA N N N N 1 ABA CA C N S 2 ABA C C N N 3 ABA O O N N 4 ABA CB C N N 5 ABA CG C N N 6 ABA OXT O N N 7 ABA H H N N 8 ABA H2 H N N 9 ABA HA H N N 10 ABA HB3 H N N 11 ABA HB2 H N N 12 ABA HG1 H N N 13 ABA HG3 H N N 14 ABA HG2 H N N 15 ABA HXT H N N 16 ALA N N N N 17 ALA CA C N S 18 ALA C C N N 19 ALA O O N N 20 ALA CB C N N 21 ALA OXT O N N 22 ALA H H N N 23 ALA H2 H N N 24 ALA HA H N N 25 ALA HB1 H N N 26 ALA HB2 H N N 27 ALA HB3 H N N 28 ALA HXT H N N 29 ARG N N N N 30 ARG CA C N S 31 ARG C C N N 32 ARG O O N N 33 ARG CB C N N 34 ARG CG C N N 35 ARG CD C N N 36 ARG NE N N N 37 ARG CZ C N N 38 ARG NH1 N N N 39 ARG NH2 N N N 40 ARG OXT O N N 41 ARG H H N N 42 ARG H2 H N N 43 ARG HA H N N 44 ARG HB2 H N N 45 ARG HB3 H N N 46 ARG HG2 H N N 47 ARG HG3 H N N 48 ARG HD2 H N N 49 ARG HD3 H N N 50 ARG HE H N N 51 ARG HH11 H N N 52 ARG HH12 H N N 53 ARG HH21 H N N 54 ARG HH22 H N N 55 ARG HXT H N N 56 ASN N N N N 57 ASN CA C N S 58 ASN C C N N 59 ASN O O N N 60 ASN CB C N N 61 ASN CG C N N 62 ASN OD1 O N N 63 ASN ND2 N N N 64 ASN OXT O N N 65 ASN H H N N 66 ASN H2 H N N 67 ASN HA H N N 68 ASN HB2 H N N 69 ASN HB3 H N N 70 ASN HD21 H N N 71 ASN HD22 H N N 72 ASN HXT H N N 73 ASP N N N N 74 ASP CA C N S 75 ASP C C N N 76 ASP O O N N 77 ASP CB C N N 78 ASP CG C N N 79 ASP OD1 O N N 80 ASP OD2 O N N 81 ASP OXT O N N 82 ASP H H N N 83 ASP H2 H N N 84 ASP HA H N N 85 ASP HB2 H N N 86 ASP HB3 H N N 87 ASP HD2 H N N 88 ASP HXT H N N 89 GLN N N N N 90 GLN CA C N S 91 GLN C C N N 92 GLN O O N N 93 GLN CB C N N 94 GLN CG C N N 95 GLN CD C N N 96 GLN OE1 O N N 97 GLN NE2 N N N 98 GLN OXT O N N 99 GLN H H N N 100 GLN H2 H N N 101 GLN HA H N N 102 GLN HB2 H N N 103 GLN HB3 H N N 104 GLN HG2 H N N 105 GLN HG3 H N N 106 GLN HE21 H N N 107 GLN HE22 H N N 108 GLN HXT H N N 109 GLU N N N N 110 GLU CA C N S 111 GLU C C N N 112 GLU O O N N 113 GLU CB C N N 114 GLU CG C N N 115 GLU CD C N N 116 GLU OE1 O N N 117 GLU OE2 O N N 118 GLU OXT O N N 119 GLU H H N N 120 GLU H2 H N N 121 GLU HA H N N 122 GLU HB2 H N N 123 GLU HB3 H N N 124 GLU HG2 H N N 125 GLU HG3 H N N 126 GLU HE2 H N N 127 GLU HXT H N N 128 GLY N N N N 129 GLY CA C N N 130 GLY C C N N 131 GLY O O N N 132 GLY OXT O N N 133 GLY H H N N 134 GLY H2 H N N 135 GLY HA2 H N N 136 GLY HA3 H N N 137 GLY HXT H N N 138 HIS N N N N 139 HIS CA C N S 140 HIS C C N N 141 HIS O O N N 142 HIS CB C N N 143 HIS CG C Y N 144 HIS ND1 N Y N 145 HIS CD2 C Y N 146 HIS CE1 C Y N 147 HIS NE2 N Y N 148 HIS OXT O N N 149 HIS H H N N 150 HIS H2 H N N 151 HIS HA H N N 152 HIS HB2 H N N 153 HIS HB3 H N N 154 HIS HD1 H N N 155 HIS HD2 H N N 156 HIS HE1 H N N 157 HIS HE2 H N N 158 HIS HXT H N N 159 HOH O O N N 160 HOH H1 H N N 161 HOH H2 H N N 162 ILE N N N N 163 ILE CA C N S 164 ILE C C N N 165 ILE O O N N 166 ILE CB C N S 167 ILE CG1 C N N 168 ILE CG2 C N N 169 ILE CD1 C N N 170 ILE OXT O N N 171 ILE H H N N 172 ILE H2 H N N 173 ILE HA H N N 174 ILE HB H N N 175 ILE HG12 H N N 176 ILE HG13 H N N 177 ILE HG21 H N N 178 ILE HG22 H N N 179 ILE HG23 H N N 180 ILE HD11 H N N 181 ILE HD12 H N N 182 ILE HD13 H N N 183 ILE HXT H N N 184 KVI C7 C N N 185 KVI O2 O N N 186 KVI C8 C N N 187 KVI N10 N N N 188 KVI C33 C N S 189 KVI C34 C N N 190 KVI O8 O N N 191 KVI C35 C N R 192 KVI O9 O N N 193 KVI C36 C N N 194 KVI N8 N N N 195 KVI C14 C N S 196 KVI C15 C N N 197 KVI O5 O N N 198 KVI C16 C N S 199 KVI C17 C N N 200 KVI C18 C N N 201 KVI C19 C N N 202 KVI N9 N N N 203 KVI C20 C N S 204 KVI C21 C N N 205 KVI C22 C N N 206 KVI C23 C N N 207 KVI C24 C N N 208 KVI C25 C N N 209 KVI O6 O N N 210 KVI C26 C N N 211 KVI C27 C N R 212 KVI C28 C N N 213 KVI C29 C N N 214 KVI C30 C N N 215 KVI C31 C N N 216 KVI C32 C N N 217 KVI O7 O N N 218 KVI N6 N N N 219 KVI C9 C N S 220 KVI C10 C N N 221 KVI O3 O N N 222 KVI C11 C N N 223 KVI C12 C N N 224 KVI C13 C N N 225 KVI O4 O N N 226 KVI N7 N N N 227 KVI N1 N N N 228 KVI C1 C N S 229 KVI C6 C N N 230 KVI O1 O N N 231 KVI C2 C N N 232 KVI C3 C N N 233 KVI C4 C N N 234 KVI N2 N N N 235 KVI C5 C N N 236 KVI N4 N N N 237 KVI N3 N N N 238 KVI N5 N N N 239 KVI H32 H N N 240 KVI H33 H N N 241 KVI H34 H N N 242 KVI H9 H N N 243 KVI H61 H N N 244 KVI H62 H N N 245 KVI H63 H N N 246 KVI H64 H N N 247 KVI H65 H N N 248 KVI H66 H N N 249 KVI H40 H N N 250 KVI H41 H N N 251 KVI H12 H N N 252 KVI H13 H N N 253 KVI H14 H N N 254 KVI H15 H N N 255 KVI H16 H N N 256 KVI H17 H N N 257 KVI H42 H N N 258 KVI H43 H N N 259 KVI H44 H N N 260 KVI H45 H N N 261 KVI H18 H N N 262 KVI H19 H N N 263 KVI H20 H N N 264 KVI H21 H N N 265 KVI H22 H N N 266 KVI H46 H N N 267 KVI H47 H N N 268 KVI H48 H N N 269 KVI H49 H N N 270 KVI H50 H N N 271 KVI H23 H N N 272 KVI H24 H N N 273 KVI H51 H N N 274 KVI H52 H N N 275 KVI H53 H N N 276 KVI H54 H N N 277 KVI H55 H N N 278 KVI H56 H N N 279 KVI H57 H N N 280 KVI H58 H N N 281 KVI H59 H N N 282 KVI H60 H N N 283 KVI H35 H N N 284 KVI H8 H N N 285 KVI H10 H N N 286 KVI H11 H N N 287 KVI H36 H N N 288 KVI H37 H N N 289 KVI H38 H N N 290 KVI H39 H N N 291 KVI H25 H N N 292 KVI H1 H N N 293 KVI H2 H N N 294 KVI H3 H N N 295 KVI H4 H N N 296 KVI H5 H N N 297 KVI H6 H N N 298 KVI H7 H N N 299 KVI H26 H N N 300 KVI H28 H N N 301 KVI H29 H N N 302 KVI H27 H N N 303 KVI H30 H N N 304 KVI H31 H N N 305 LEU N N N N 306 LEU CA C N S 307 LEU C C N N 308 LEU O O N N 309 LEU CB C N N 310 LEU CG C N N 311 LEU CD1 C N N 312 LEU CD2 C N N 313 LEU OXT O N N 314 LEU H H N N 315 LEU H2 H N N 316 LEU HA H N N 317 LEU HB2 H N N 318 LEU HB3 H N N 319 LEU HG H N N 320 LEU HD11 H N N 321 LEU HD12 H N N 322 LEU HD13 H N N 323 LEU HD21 H N N 324 LEU HD22 H N N 325 LEU HD23 H N N 326 LEU HXT H N N 327 LYS N N N N 328 LYS CA C N S 329 LYS C C N N 330 LYS O O N N 331 LYS CB C N N 332 LYS CG C N N 333 LYS CD C N N 334 LYS CE C N N 335 LYS NZ N N N 336 LYS OXT O N N 337 LYS H H N N 338 LYS H2 H N N 339 LYS HA H N N 340 LYS HB2 H N N 341 LYS HB3 H N N 342 LYS HG2 H N N 343 LYS HG3 H N N 344 LYS HD2 H N N 345 LYS HD3 H N N 346 LYS HE2 H N N 347 LYS HE3 H N N 348 LYS HZ1 H N N 349 LYS HZ2 H N N 350 LYS HZ3 H N N 351 LYS HXT H N N 352 NLE N N N N 353 NLE CA C N S 354 NLE C C N N 355 NLE O O N N 356 NLE OXT O N N 357 NLE CB C N N 358 NLE CG C N N 359 NLE CD C N N 360 NLE CE C N N 361 NLE H H N N 362 NLE H2 H N N 363 NLE HA H N N 364 NLE HXT H N N 365 NLE HB2 H N N 366 NLE HB3 H N N 367 NLE HG2 H N N 368 NLE HG3 H N N 369 NLE HD2 H N N 370 NLE HD3 H N N 371 NLE HE1 H N N 372 NLE HE2 H N N 373 NLE HE3 H N N 374 PHE N N N N 375 PHE CA C N S 376 PHE C C N N 377 PHE O O N N 378 PHE CB C N N 379 PHE CG C Y N 380 PHE CD1 C Y N 381 PHE CD2 C Y N 382 PHE CE1 C Y N 383 PHE CE2 C Y N 384 PHE CZ C Y N 385 PHE OXT O N N 386 PHE H H N N 387 PHE H2 H N N 388 PHE HA H N N 389 PHE HB2 H N N 390 PHE HB3 H N N 391 PHE HD1 H N N 392 PHE HD2 H N N 393 PHE HE1 H N N 394 PHE HE2 H N N 395 PHE HZ H N N 396 PHE HXT H N N 397 PRO N N N N 398 PRO CA C N S 399 PRO C C N N 400 PRO O O N N 401 PRO CB C N N 402 PRO CG C N N 403 PRO CD C N N 404 PRO OXT O N N 405 PRO H H N N 406 PRO HA H N N 407 PRO HB2 H N N 408 PRO HB3 H N N 409 PRO HG2 H N N 410 PRO HG3 H N N 411 PRO HD2 H N N 412 PRO HD3 H N N 413 PRO HXT H N N 414 THR N N N N 415 THR CA C N S 416 THR C C N N 417 THR O O N N 418 THR CB C N R 419 THR OG1 O N N 420 THR CG2 C N N 421 THR OXT O N N 422 THR H H N N 423 THR H2 H N N 424 THR HA H N N 425 THR HB H N N 426 THR HG1 H N N 427 THR HG21 H N N 428 THR HG22 H N N 429 THR HG23 H N N 430 THR HXT H N N 431 TRP N N N N 432 TRP CA C N S 433 TRP C C N N 434 TRP O O N N 435 TRP CB C N N 436 TRP CG C Y N 437 TRP CD1 C Y N 438 TRP CD2 C Y N 439 TRP NE1 N Y N 440 TRP CE2 C Y N 441 TRP CE3 C Y N 442 TRP CZ2 C Y N 443 TRP CZ3 C Y N 444 TRP CH2 C Y N 445 TRP OXT O N N 446 TRP H H N N 447 TRP H2 H N N 448 TRP HA H N N 449 TRP HB2 H N N 450 TRP HB3 H N N 451 TRP HD1 H N N 452 TRP HE1 H N N 453 TRP HE3 H N N 454 TRP HZ2 H N N 455 TRP HZ3 H N N 456 TRP HH2 H N N 457 TRP HXT H N N 458 TYR N N N N 459 TYR CA C N S 460 TYR C C N N 461 TYR O O N N 462 TYR CB C N N 463 TYR CG C Y N 464 TYR CD1 C Y N 465 TYR CD2 C Y N 466 TYR CE1 C Y N 467 TYR CE2 C Y N 468 TYR CZ C Y N 469 TYR OH O N N 470 TYR OXT O N N 471 TYR H H N N 472 TYR H2 H N N 473 TYR HA H N N 474 TYR HB2 H N N 475 TYR HB3 H N N 476 TYR HD1 H N N 477 TYR HD2 H N N 478 TYR HE1 H N N 479 TYR HE2 H N N 480 TYR HH H N N 481 TYR HXT H N N 482 VAL N N N N 483 VAL CA C N S 484 VAL C C N N 485 VAL O O N N 486 VAL CB C N N 487 VAL CG1 C N N 488 VAL CG2 C N N 489 VAL OXT O N N 490 VAL H H N N 491 VAL H2 H N N 492 VAL HA H N N 493 VAL HB H N N 494 VAL HG11 H N N 495 VAL HG12 H N N 496 VAL HG13 H N N 497 VAL HG21 H N N 498 VAL HG22 H N N 499 VAL HG23 H N N 500 VAL HXT H N N 501 YCM N N N N 502 YCM CA C N R 503 YCM CB C N N 504 YCM SG S N N 505 YCM CD C N N 506 YCM CE C N N 507 YCM OZ1 O N N 508 YCM NZ2 N N N 509 YCM C C N N 510 YCM O O N N 511 YCM OXT O N N 512 YCM H H N N 513 YCM H2 H N N 514 YCM HA H N N 515 YCM HB2 H N N 516 YCM HB3 H N N 517 YCM HD2 H N N 518 YCM HD3 H N N 519 YCM HZ21 H N N 520 YCM HZ22 H N N 521 YCM HXT H N N 522 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ABA N CA sing N N 1 ABA N H sing N N 2 ABA N H2 sing N N 3 ABA CA C sing N N 4 ABA CA CB sing N N 5 ABA CA HA sing N N 6 ABA C O doub N N 7 ABA C OXT sing N N 8 ABA CB CG sing N N 9 ABA CB HB3 sing N N 10 ABA CB HB2 sing N N 11 ABA CG HG1 sing N N 12 ABA CG HG3 sing N N 13 ABA CG HG2 sing N N 14 ABA OXT HXT sing N N 15 ALA N CA sing N N 16 ALA N H sing N N 17 ALA N H2 sing N N 18 ALA CA C sing N N 19 ALA CA CB sing N N 20 ALA CA HA sing N N 21 ALA C O doub N N 22 ALA C OXT sing N N 23 ALA CB HB1 sing N N 24 ALA CB HB2 sing N N 25 ALA CB HB3 sing N N 26 ALA OXT HXT sing N N 27 ARG N CA sing N N 28 ARG N H sing N N 29 ARG N H2 sing N N 30 ARG CA C sing N N 31 ARG CA CB sing N N 32 ARG CA HA sing N N 33 ARG C O doub N N 34 ARG C OXT sing N N 35 ARG CB CG sing N N 36 ARG CB HB2 sing N N 37 ARG CB HB3 sing N N 38 ARG CG CD sing N N 39 ARG CG HG2 sing N N 40 ARG CG HG3 sing N N 41 ARG CD NE sing N N 42 ARG CD HD2 sing N N 43 ARG CD HD3 sing N N 44 ARG NE CZ sing N N 45 ARG NE HE sing N N 46 ARG CZ NH1 sing N N 47 ARG CZ NH2 doub N N 48 ARG NH1 HH11 sing N N 49 ARG NH1 HH12 sing N N 50 ARG NH2 HH21 sing N N 51 ARG NH2 HH22 sing N N 52 ARG OXT HXT sing N N 53 ASN N CA sing N N 54 ASN N H sing N N 55 ASN N H2 sing N N 56 ASN CA C sing N N 57 ASN CA CB sing N N 58 ASN CA HA sing N N 59 ASN C O doub N N 60 ASN C OXT sing N N 61 ASN CB CG sing N N 62 ASN CB HB2 sing N N 63 ASN CB HB3 sing N N 64 ASN CG OD1 doub N N 65 ASN CG ND2 sing N N 66 ASN ND2 HD21 sing N N 67 ASN ND2 HD22 sing N N 68 ASN OXT HXT sing N N 69 ASP N CA sing N N 70 ASP N H sing N N 71 ASP N H2 sing N N 72 ASP CA C sing N N 73 ASP CA CB sing N N 74 ASP CA HA sing N N 75 ASP C O doub N N 76 ASP C OXT sing N N 77 ASP CB CG sing N N 78 ASP CB HB2 sing N N 79 ASP CB HB3 sing N N 80 ASP CG OD1 doub N N 81 ASP CG OD2 sing N N 82 ASP OD2 HD2 sing N N 83 ASP OXT HXT sing N N 84 GLN N CA sing N N 85 GLN N H sing N N 86 GLN N H2 sing N N 87 GLN CA C sing N N 88 GLN CA CB sing N N 89 GLN CA HA sing N N 90 GLN C O doub N N 91 GLN C OXT sing N N 92 GLN CB CG sing N N 93 GLN CB HB2 sing N N 94 GLN CB HB3 sing N N 95 GLN CG CD sing N N 96 GLN CG HG2 sing N N 97 GLN CG HG3 sing N N 98 GLN CD OE1 doub N N 99 GLN CD NE2 sing N N 100 GLN NE2 HE21 sing N N 101 GLN NE2 HE22 sing N N 102 GLN OXT HXT sing N N 103 GLU N CA sing N N 104 GLU N H sing N N 105 GLU N H2 sing N N 106 GLU CA C sing N N 107 GLU CA CB sing N N 108 GLU CA HA sing N N 109 GLU C O doub N N 110 GLU C OXT sing N N 111 GLU CB CG sing N N 112 GLU CB HB2 sing N N 113 GLU CB HB3 sing N N 114 GLU CG CD sing N N 115 GLU CG HG2 sing N N 116 GLU CG HG3 sing N N 117 GLU CD OE1 doub N N 118 GLU CD OE2 sing N N 119 GLU OE2 HE2 sing N N 120 GLU OXT HXT sing N N 121 GLY N CA sing N N 122 GLY N H sing N N 123 GLY N H2 sing N N 124 GLY CA C sing N N 125 GLY CA HA2 sing N N 126 GLY CA HA3 sing N N 127 GLY C O doub N N 128 GLY C OXT sing N N 129 GLY OXT HXT sing N N 130 HIS N CA sing N N 131 HIS N H sing N N 132 HIS N H2 sing N N 133 HIS CA C sing N N 134 HIS CA CB sing N N 135 HIS CA HA sing N N 136 HIS C O doub N N 137 HIS C OXT sing N N 138 HIS CB CG sing N N 139 HIS CB HB2 sing N N 140 HIS CB HB3 sing N N 141 HIS CG ND1 sing Y N 142 HIS CG CD2 doub Y N 143 HIS ND1 CE1 doub Y N 144 HIS ND1 HD1 sing N N 145 HIS CD2 NE2 sing Y N 146 HIS CD2 HD2 sing N N 147 HIS CE1 NE2 sing Y N 148 HIS CE1 HE1 sing N N 149 HIS NE2 HE2 sing N N 150 HIS OXT HXT sing N N 151 HOH O H1 sing N N 152 HOH O H2 sing N N 153 ILE N CA sing N N 154 ILE N H sing N N 155 ILE N H2 sing N N 156 ILE CA C sing N N 157 ILE CA CB sing N N 158 ILE CA HA sing N N 159 ILE C O doub N N 160 ILE C OXT sing N N 161 ILE CB CG1 sing N N 162 ILE CB CG2 sing N N 163 ILE CB HB sing N N 164 ILE CG1 CD1 sing N N 165 ILE CG1 HG12 sing N N 166 ILE CG1 HG13 sing N N 167 ILE CG2 HG21 sing N N 168 ILE CG2 HG22 sing N N 169 ILE CG2 HG23 sing N N 170 ILE CD1 HD11 sing N N 171 ILE CD1 HD12 sing N N 172 ILE CD1 HD13 sing N N 173 ILE OXT HXT sing N N 174 KVI C36 C35 sing N N 175 KVI O8 C34 doub N N 176 KVI C35 C33 sing N N 177 KVI C35 O9 sing N N 178 KVI C33 C34 sing N N 179 KVI C33 N10 sing N N 180 KVI C34 N8 sing N N 181 KVI C19 C17 sing N N 182 KVI O2 C7 doub N N 183 KVI N10 C7 sing N N 184 KVI C22 C21 sing N N 185 KVI C22 C23 sing N N 186 KVI C7 C8 sing N N 187 KVI N8 C14 sing N N 188 KVI C21 C20 sing N N 189 KVI N9 C20 sing N N 190 KVI N9 C15 sing N N 191 KVI C14 C15 sing N N 192 KVI C14 C16 sing N N 193 KVI C17 C16 sing N N 194 KVI C23 C24 sing N N 195 KVI C20 C25 sing N N 196 KVI C15 O5 doub N N 197 KVI C16 C18 sing N N 198 KVI O6 C25 doub N N 199 KVI C25 C26 sing N N 200 KVI C26 C27 sing N N 201 KVI C27 C28 sing N N 202 KVI C27 C32 sing N N 203 KVI C28 C29 sing N N 204 KVI C32 N6 sing N N 205 KVI C32 O7 doub N N 206 KVI N6 C9 sing N N 207 KVI C29 C30 sing N N 208 KVI C11 C9 sing N N 209 KVI C11 C12 sing N N 210 KVI O4 C13 doub N N 211 KVI O3 C10 doub N N 212 KVI C9 C10 sing N N 213 KVI C12 C13 sing N N 214 KVI C13 N7 sing N N 215 KVI C10 N1 sing N N 216 KVI C30 C31 sing N N 217 KVI N1 C1 sing N N 218 KVI C1 C6 sing N N 219 KVI C1 C2 sing N N 220 KVI N5 C6 sing N N 221 KVI C6 O1 doub N N 222 KVI C2 C3 sing N N 223 KVI C3 C4 sing N N 224 KVI C4 N2 sing N N 225 KVI N3 C5 doub N N 226 KVI N2 C5 sing N N 227 KVI C5 N4 sing N N 228 KVI C1 H1 sing N N 229 KVI C2 H2 sing N N 230 KVI C2 H3 sing N N 231 KVI C3 H4 sing N N 232 KVI C3 H5 sing N N 233 KVI C4 H6 sing N N 234 KVI C4 H7 sing N N 235 KVI C9 H8 sing N N 236 KVI N10 H9 sing N N 237 KVI C11 H10 sing N N 238 KVI C11 H11 sing N N 239 KVI C16 H12 sing N N 240 KVI C17 H13 sing N N 241 KVI C17 H14 sing N N 242 KVI C18 H15 sing N N 243 KVI C18 H16 sing N N 244 KVI C18 H17 sing N N 245 KVI C20 H18 sing N N 246 KVI C21 H19 sing N N 247 KVI C21 H20 sing N N 248 KVI C22 H21 sing N N 249 KVI C22 H22 sing N N 250 KVI C26 H23 sing N N 251 KVI C26 H24 sing N N 252 KVI N1 H25 sing N N 253 KVI N2 H26 sing N N 254 KVI N3 H27 sing N N 255 KVI N4 H28 sing N N 256 KVI N4 H29 sing N N 257 KVI N5 H30 sing N N 258 KVI N5 H31 sing N N 259 KVI C8 H32 sing N N 260 KVI C8 H33 sing N N 261 KVI C8 H34 sing N N 262 KVI N6 H35 sing N N 263 KVI C12 H36 sing N N 264 KVI C12 H37 sing N N 265 KVI N7 H38 sing N N 266 KVI N7 H39 sing N N 267 KVI N8 H40 sing N N 268 KVI C14 H41 sing N N 269 KVI C19 H42 sing N N 270 KVI C19 H43 sing N N 271 KVI C19 H44 sing N N 272 KVI N9 H45 sing N N 273 KVI C23 H46 sing N N 274 KVI C23 H47 sing N N 275 KVI C24 H48 sing N N 276 KVI C24 H49 sing N N 277 KVI C24 H50 sing N N 278 KVI C27 H51 sing N N 279 KVI C28 H52 sing N N 280 KVI C28 H53 sing N N 281 KVI C29 H54 sing N N 282 KVI C29 H55 sing N N 283 KVI C30 H56 sing N N 284 KVI C30 H57 sing N N 285 KVI C31 H58 sing N N 286 KVI C31 H59 sing N N 287 KVI C31 H60 sing N N 288 KVI C33 H61 sing N N 289 KVI C35 H62 sing N N 290 KVI O9 H63 sing N N 291 KVI C36 H64 sing N N 292 KVI C36 H65 sing N N 293 KVI C36 H66 sing N N 294 LEU N CA sing N N 295 LEU N H sing N N 296 LEU N H2 sing N N 297 LEU CA C sing N N 298 LEU CA CB sing N N 299 LEU CA HA sing N N 300 LEU C O doub N N 301 LEU C OXT sing N N 302 LEU CB CG sing N N 303 LEU CB HB2 sing N N 304 LEU CB HB3 sing N N 305 LEU CG CD1 sing N N 306 LEU CG CD2 sing N N 307 LEU CG HG sing N N 308 LEU CD1 HD11 sing N N 309 LEU CD1 HD12 sing N N 310 LEU CD1 HD13 sing N N 311 LEU CD2 HD21 sing N N 312 LEU CD2 HD22 sing N N 313 LEU CD2 HD23 sing N N 314 LEU OXT HXT sing N N 315 LYS N CA sing N N 316 LYS N H sing N N 317 LYS N H2 sing N N 318 LYS CA C sing N N 319 LYS CA CB sing N N 320 LYS CA HA sing N N 321 LYS C O doub N N 322 LYS C OXT sing N N 323 LYS CB CG sing N N 324 LYS CB HB2 sing N N 325 LYS CB HB3 sing N N 326 LYS CG CD sing N N 327 LYS CG HG2 sing N N 328 LYS CG HG3 sing N N 329 LYS CD CE sing N N 330 LYS CD HD2 sing N N 331 LYS CD HD3 sing N N 332 LYS CE NZ sing N N 333 LYS CE HE2 sing N N 334 LYS CE HE3 sing N N 335 LYS NZ HZ1 sing N N 336 LYS NZ HZ2 sing N N 337 LYS NZ HZ3 sing N N 338 LYS OXT HXT sing N N 339 NLE N CA sing N N 340 NLE N H sing N N 341 NLE N H2 sing N N 342 NLE CA C sing N N 343 NLE CA CB sing N N 344 NLE CA HA sing N N 345 NLE C O doub N N 346 NLE C OXT sing N N 347 NLE OXT HXT sing N N 348 NLE CB CG sing N N 349 NLE CB HB2 sing N N 350 NLE CB HB3 sing N N 351 NLE CG CD sing N N 352 NLE CG HG2 sing N N 353 NLE CG HG3 sing N N 354 NLE CD CE sing N N 355 NLE CD HD2 sing N N 356 NLE CD HD3 sing N N 357 NLE CE HE1 sing N N 358 NLE CE HE2 sing N N 359 NLE CE HE3 sing N N 360 PHE N CA sing N N 361 PHE N H sing N N 362 PHE N H2 sing N N 363 PHE CA C sing N N 364 PHE CA CB sing N N 365 PHE CA HA sing N N 366 PHE C O doub N N 367 PHE C OXT sing N N 368 PHE CB CG sing N N 369 PHE CB HB2 sing N N 370 PHE CB HB3 sing N N 371 PHE CG CD1 doub Y N 372 PHE CG CD2 sing Y N 373 PHE CD1 CE1 sing Y N 374 PHE CD1 HD1 sing N N 375 PHE CD2 CE2 doub Y N 376 PHE CD2 HD2 sing N N 377 PHE CE1 CZ doub Y N 378 PHE CE1 HE1 sing N N 379 PHE CE2 CZ sing Y N 380 PHE CE2 HE2 sing N N 381 PHE CZ HZ sing N N 382 PHE OXT HXT sing N N 383 PRO N CA sing N N 384 PRO N CD sing N N 385 PRO N H sing N N 386 PRO CA C sing N N 387 PRO CA CB sing N N 388 PRO CA HA sing N N 389 PRO C O doub N N 390 PRO C OXT sing N N 391 PRO CB CG sing N N 392 PRO CB HB2 sing N N 393 PRO CB HB3 sing N N 394 PRO CG CD sing N N 395 PRO CG HG2 sing N N 396 PRO CG HG3 sing N N 397 PRO CD HD2 sing N N 398 PRO CD HD3 sing N N 399 PRO OXT HXT sing N N 400 THR N CA sing N N 401 THR N H sing N N 402 THR N H2 sing N N 403 THR CA C sing N N 404 THR CA CB sing N N 405 THR CA HA sing N N 406 THR C O doub N N 407 THR C OXT sing N N 408 THR CB OG1 sing N N 409 THR CB CG2 sing N N 410 THR CB HB sing N N 411 THR OG1 HG1 sing N N 412 THR CG2 HG21 sing N N 413 THR CG2 HG22 sing N N 414 THR CG2 HG23 sing N N 415 THR OXT HXT sing N N 416 TRP N CA sing N N 417 TRP N H sing N N 418 TRP N H2 sing N N 419 TRP CA C sing N N 420 TRP CA CB sing N N 421 TRP CA HA sing N N 422 TRP C O doub N N 423 TRP C OXT sing N N 424 TRP CB CG sing N N 425 TRP CB HB2 sing N N 426 TRP CB HB3 sing N N 427 TRP CG CD1 doub Y N 428 TRP CG CD2 sing Y N 429 TRP CD1 NE1 sing Y N 430 TRP CD1 HD1 sing N N 431 TRP CD2 CE2 doub Y N 432 TRP CD2 CE3 sing Y N 433 TRP NE1 CE2 sing Y N 434 TRP NE1 HE1 sing N N 435 TRP CE2 CZ2 sing Y N 436 TRP CE3 CZ3 doub Y N 437 TRP CE3 HE3 sing N N 438 TRP CZ2 CH2 doub Y N 439 TRP CZ2 HZ2 sing N N 440 TRP CZ3 CH2 sing Y N 441 TRP CZ3 HZ3 sing N N 442 TRP CH2 HH2 sing N N 443 TRP OXT HXT sing N N 444 TYR N CA sing N N 445 TYR N H sing N N 446 TYR N H2 sing N N 447 TYR CA C sing N N 448 TYR CA CB sing N N 449 TYR CA HA sing N N 450 TYR C O doub N N 451 TYR C OXT sing N N 452 TYR CB CG sing N N 453 TYR CB HB2 sing N N 454 TYR CB HB3 sing N N 455 TYR CG CD1 doub Y N 456 TYR CG CD2 sing Y N 457 TYR CD1 CE1 sing Y N 458 TYR CD1 HD1 sing N N 459 TYR CD2 CE2 doub Y N 460 TYR CD2 HD2 sing N N 461 TYR CE1 CZ doub Y N 462 TYR CE1 HE1 sing N N 463 TYR CE2 CZ sing Y N 464 TYR CE2 HE2 sing N N 465 TYR CZ OH sing N N 466 TYR OH HH sing N N 467 TYR OXT HXT sing N N 468 VAL N CA sing N N 469 VAL N H sing N N 470 VAL N H2 sing N N 471 VAL CA C sing N N 472 VAL CA CB sing N N 473 VAL CA HA sing N N 474 VAL C O doub N N 475 VAL C OXT sing N N 476 VAL CB CG1 sing N N 477 VAL CB CG2 sing N N 478 VAL CB HB sing N N 479 VAL CG1 HG11 sing N N 480 VAL CG1 HG12 sing N N 481 VAL CG1 HG13 sing N N 482 VAL CG2 HG21 sing N N 483 VAL CG2 HG22 sing N N 484 VAL CG2 HG23 sing N N 485 VAL OXT HXT sing N N 486 YCM N CA sing N N 487 YCM N H sing N N 488 YCM N H2 sing N N 489 YCM CA CB sing N N 490 YCM CA C sing N N 491 YCM CA HA sing N N 492 YCM CB SG sing N N 493 YCM CB HB2 sing N N 494 YCM CB HB3 sing N N 495 YCM SG CD sing N N 496 YCM CD CE sing N N 497 YCM CD HD2 sing N N 498 YCM CD HD3 sing N N 499 YCM CE OZ1 doub N N 500 YCM CE NZ2 sing N N 501 YCM NZ2 HZ21 sing N N 502 YCM NZ2 HZ22 sing N N 503 YCM C O doub N N 504 YCM C OXT sing N N 505 YCM OXT HXT sing N N 506 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4HVP _pdbx_initial_refinement_model.details 'PDB ENTRY 4HVP' # _atom_sites.entry_id 3DCK _atom_sites.fract_transf_matrix[1][1] 0.019597 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017079 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016238 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_