data_3DCZ # _entry.id 3DCZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DCZ pdb_00003dcz 10.2210/pdb3dcz/pdb RCSB RCSB047883 ? ? WWPDB D_1000047883 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 358404 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3DCZ _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-06-04 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of putative RnfG subunit of electron transport complex (TM0246) from THERMOTOGA MARITIMA at 1.65 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3DCZ _cell.length_a 91.125 _cell.length_b 103.827 _cell.length_c 44.035 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DCZ _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative RnfG subunit of electron transport complex' 22978.785 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 145 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHKGKIQEADNAAKLSAIKFVLKDPLTGDYLVDEKEIEEIVKKTGIETVVLKEYKEGVVLGPLYEF VTKDGRNAYVLSGYAPGFGGNVTVVACFIKTEDGF(MSE)LNSVRVIDYSQETPGLGAKIGEESIQRRFFPVPPEGLKNG LRVDKDAGLPKGSPEELKKQGIVKVSDV(MSE)TGATITPRAVVTALNL(MSE)YRYLEEVSK ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHKGKIQEADNAAKLSAIKFVLKDPLTGDYLVDEKEIEEIVKKTGIETVVLKEYKEGVVLGPLYEFVTKD GRNAYVLSGYAPGFGGNVTVVACFIKTEDGFMLNSVRVIDYSQETPGLGAKIGEESIQRRFFPVPPEGLKNGLRVDKDAG LPKGSPEELKKQGIVKVSDVMTGATITPRAVVTALNLMYRYLEEVSK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 358404 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 LYS n 1 14 GLY n 1 15 LYS n 1 16 ILE n 1 17 GLN n 1 18 GLU n 1 19 ALA n 1 20 ASP n 1 21 ASN n 1 22 ALA n 1 23 ALA n 1 24 LYS n 1 25 LEU n 1 26 SER n 1 27 ALA n 1 28 ILE n 1 29 LYS n 1 30 PHE n 1 31 VAL n 1 32 LEU n 1 33 LYS n 1 34 ASP n 1 35 PRO n 1 36 LEU n 1 37 THR n 1 38 GLY n 1 39 ASP n 1 40 TYR n 1 41 LEU n 1 42 VAL n 1 43 ASP n 1 44 GLU n 1 45 LYS n 1 46 GLU n 1 47 ILE n 1 48 GLU n 1 49 GLU n 1 50 ILE n 1 51 VAL n 1 52 LYS n 1 53 LYS n 1 54 THR n 1 55 GLY n 1 56 ILE n 1 57 GLU n 1 58 THR n 1 59 VAL n 1 60 VAL n 1 61 LEU n 1 62 LYS n 1 63 GLU n 1 64 TYR n 1 65 LYS n 1 66 GLU n 1 67 GLY n 1 68 VAL n 1 69 VAL n 1 70 LEU n 1 71 GLY n 1 72 PRO n 1 73 LEU n 1 74 TYR n 1 75 GLU n 1 76 PHE n 1 77 VAL n 1 78 THR n 1 79 LYS n 1 80 ASP n 1 81 GLY n 1 82 ARG n 1 83 ASN n 1 84 ALA n 1 85 TYR n 1 86 VAL n 1 87 LEU n 1 88 SER n 1 89 GLY n 1 90 TYR n 1 91 ALA n 1 92 PRO n 1 93 GLY n 1 94 PHE n 1 95 GLY n 1 96 GLY n 1 97 ASN n 1 98 VAL n 1 99 THR n 1 100 VAL n 1 101 VAL n 1 102 ALA n 1 103 CYS n 1 104 PHE n 1 105 ILE n 1 106 LYS n 1 107 THR n 1 108 GLU n 1 109 ASP n 1 110 GLY n 1 111 PHE n 1 112 MSE n 1 113 LEU n 1 114 ASN n 1 115 SER n 1 116 VAL n 1 117 ARG n 1 118 VAL n 1 119 ILE n 1 120 ASP n 1 121 TYR n 1 122 SER n 1 123 GLN n 1 124 GLU n 1 125 THR n 1 126 PRO n 1 127 GLY n 1 128 LEU n 1 129 GLY n 1 130 ALA n 1 131 LYS n 1 132 ILE n 1 133 GLY n 1 134 GLU n 1 135 GLU n 1 136 SER n 1 137 ILE n 1 138 GLN n 1 139 ARG n 1 140 ARG n 1 141 PHE n 1 142 PHE n 1 143 PRO n 1 144 VAL n 1 145 PRO n 1 146 PRO n 1 147 GLU n 1 148 GLY n 1 149 LEU n 1 150 LYS n 1 151 ASN n 1 152 GLY n 1 153 LEU n 1 154 ARG n 1 155 VAL n 1 156 ASP n 1 157 LYS n 1 158 ASP n 1 159 ALA n 1 160 GLY n 1 161 LEU n 1 162 PRO n 1 163 LYS n 1 164 GLY n 1 165 SER n 1 166 PRO n 1 167 GLU n 1 168 GLU n 1 169 LEU n 1 170 LYS n 1 171 LYS n 1 172 GLN n 1 173 GLY n 1 174 ILE n 1 175 VAL n 1 176 LYS n 1 177 VAL n 1 178 SER n 1 179 ASP n 1 180 VAL n 1 181 MSE n 1 182 THR n 1 183 GLY n 1 184 ALA n 1 185 THR n 1 186 ILE n 1 187 THR n 1 188 PRO n 1 189 ARG n 1 190 ALA n 1 191 VAL n 1 192 VAL n 1 193 THR n 1 194 ALA n 1 195 LEU n 1 196 ASN n 1 197 LEU n 1 198 MSE n 1 199 TYR n 1 200 ARG n 1 201 TYR n 1 202 LEU n 1 203 GLU n 1 204 GLU n 1 205 VAL n 1 206 SER n 1 207 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TM_0246 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain DL41 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name MH4a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9WY88_THEMA _struct_ref.pdbx_db_accession Q9WY88 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KGKIQEADNAAKLSAIKFVLKDPLTGDYLVDEKEIEEIVKKTGIETVVLKEYKEGVVLGPLYEFVTKDGRNAYVLSGYAP GFGGNVTVVACFIKTEDGFMLNSVRVIDYSQETPGLGAKIGEESIQRRFFPVPPEGLKNGLRVDKDAGLPKGSPEELKKQ GIVKVSDVMTGATITPRAVVTALNLMYRYLEEVSK ; _struct_ref.pdbx_align_begin 30 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DCZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 207 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9WY88 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 224 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 30 _struct_ref_seq.pdbx_auth_seq_align_end 224 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DCZ MSE A 1 ? UNP Q9WY88 ? ? 'expression tag' 18 1 1 3DCZ GLY A 2 ? UNP Q9WY88 ? ? 'expression tag' 19 2 1 3DCZ SER A 3 ? UNP Q9WY88 ? ? 'expression tag' 20 3 1 3DCZ ASP A 4 ? UNP Q9WY88 ? ? 'expression tag' 21 4 1 3DCZ LYS A 5 ? UNP Q9WY88 ? ? 'expression tag' 22 5 1 3DCZ ILE A 6 ? UNP Q9WY88 ? ? 'expression tag' 23 6 1 3DCZ HIS A 7 ? UNP Q9WY88 ? ? 'expression tag' 24 7 1 3DCZ HIS A 8 ? UNP Q9WY88 ? ? 'expression tag' 25 8 1 3DCZ HIS A 9 ? UNP Q9WY88 ? ? 'expression tag' 26 9 1 3DCZ HIS A 10 ? UNP Q9WY88 ? ? 'expression tag' 27 10 1 3DCZ HIS A 11 ? UNP Q9WY88 ? ? 'expression tag' 28 11 1 3DCZ HIS A 12 ? UNP Q9WY88 ? ? 'expression tag' 29 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3DCZ # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;25.0% polyethylene glycol 4000, 0.2M ammonium sulfate, 0.1M sodium acetate pH 4.6, NANODROP', VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2008-05-14 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91162 1.0 2 0.97932 1.0 3 0.97891 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91162,0.97932,0.97891 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3DCZ _reflns.d_resolution_high 1.65 _reflns.d_resolution_low 29.148 _reflns.number_obs 25591 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_netI_over_sigmaI 7.500 _reflns.pdbx_Rsym_value 0.068 _reflns.pdbx_redundancy 3.700 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 18.735 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.65 1.69 ? 6885 ? 0.497 1.5 0.497 ? 3.70 ? 1876 100.00 1 1 1.69 1.74 ? 6662 ? 0.404 1.9 0.404 ? 3.70 ? 1808 100.00 2 1 1.74 1.79 ? 6524 ? 0.319 2.4 0.319 ? 3.70 ? 1772 100.00 3 1 1.79 1.84 ? 6336 ? 0.266 2.9 0.266 ? 3.70 ? 1717 100.00 4 1 1.84 1.91 ? 6206 ? 0.217 3.5 0.217 ? 3.70 ? 1680 100.00 5 1 1.91 1.97 ? 5907 ? 0.163 4.4 0.163 ? 3.70 ? 1612 100.00 6 1 1.97 2.05 ? 5804 ? 0.133 5.6 0.133 ? 3.70 ? 1558 100.00 7 1 2.05 2.13 ? 5499 ? 0.110 6.7 0.110 ? 3.70 ? 1491 100.00 8 1 2.13 2.22 ? 5399 ? 0.093 7.6 0.093 ? 3.70 ? 1464 100.00 9 1 2.22 2.33 ? 5146 ? 0.093 7.5 0.093 ? 3.70 ? 1390 100.00 10 1 2.33 2.46 ? 4829 ? 0.092 6.9 0.092 ? 3.70 ? 1319 100.00 11 1 2.46 2.61 ? 4520 ? 0.086 7.5 0.086 ? 3.60 ? 1240 100.00 12 1 2.61 2.79 ? 4306 ? 0.076 8.8 0.076 ? 3.60 ? 1184 100.00 13 1 2.79 3.01 ? 4054 ? 0.062 10.2 0.062 ? 3.70 ? 1108 100.00 14 1 3.01 3.30 ? 3760 ? 0.051 11.6 0.051 ? 3.70 ? 1027 100.00 15 1 3.30 3.69 ? 3338 ? 0.043 14.2 0.043 ? 3.60 ? 922 100.00 16 1 3.69 4.26 ? 2989 ? 0.041 14.5 0.041 ? 3.60 ? 828 100.00 17 1 4.26 5.22 ? 2520 ? 0.037 16.0 0.037 ? 3.60 ? 705 100.00 18 1 5.22 7.38 ? 1994 ? 0.041 15.2 0.041 ? 3.50 ? 569 100.00 19 1 7.38 29.15 ? 1045 ? 0.041 14.5 0.041 ? 3.30 ? 321 97.50 20 1 # _refine.entry_id 3DCZ _refine.ls_d_res_high 1.650 _refine.ls_d_res_low 29.148 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.940 _refine.ls_number_reflns_obs 25581 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 4. SO4,ACT,EDO MODELED ARE PRESENT IN CRYSTALLIZATION/CRYO CONDITIONS. ; _refine.ls_R_factor_obs 0.177 _refine.ls_R_factor_R_work 0.176 _refine.ls_R_factor_R_free 0.205 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1304 _refine.B_iso_mean 16.063 _refine.aniso_B[1][1] 0.070 _refine.aniso_B[2][2] -0.350 _refine.aniso_B[3][3] 0.280 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.pdbx_overall_ESU_R 0.085 _refine.pdbx_overall_ESU_R_Free 0.086 _refine.overall_SU_ML 0.053 _refine.overall_SU_B 3.023 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1294 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 145 _refine_hist.number_atoms_total 1457 _refine_hist.d_res_high 1.650 _refine_hist.d_res_low 29.148 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1404 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 959 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1915 1.481 2.010 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2364 0.898 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 190 5.308 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 56 35.765 24.107 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 247 13.606 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 17.145 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 224 0.092 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1552 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 273 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 268 0.216 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 969 0.199 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 673 0.184 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 744 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 128 0.156 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 21 0.261 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 25 0.314 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 18 0.163 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 906 2.053 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 356 0.489 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1433 2.989 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 553 4.256 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 470 6.114 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.650 _refine_ls_shell.d_res_low 1.693 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.000 _refine_ls_shell.number_reflns_R_work 1771 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.223 _refine_ls_shell.R_factor_R_free 0.263 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 105 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1876 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DCZ _struct.title 'CRYSTAL STRUCTURE OF A PUTATIVE RNFG SUBUNIT OF ELECTRON TRANSPORT COMPLEX (TM0246) FROM THERMOTOGA MARITIMA AT 1.65 A RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;PUTATIVE RNFG SUBUNIT OF ELECTRON TRANSPORT COMPLEX, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, OXIDOREDUCTASE ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 3DCZ # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 21 ? LEU A 32 ? ASN A 38 LEU A 49 1 ? 12 HELX_P HELX_P2 2 ASP A 43 ? GLY A 55 ? ASP A 60 GLY A 72 1 ? 13 HELX_P HELX_P3 3 ILE A 137 ? PHE A 142 ? ILE A 154 PHE A 159 5 ? 6 HELX_P HELX_P4 4 PRO A 145 ? GLY A 152 ? PRO A 162 GLY A 169 1 ? 8 HELX_P HELX_P5 5 SER A 165 ? LYS A 171 ? SER A 182 LYS A 188 1 ? 7 HELX_P HELX_P6 6 THR A 187 ? LYS A 207 ? THR A 204 LYS A 224 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PHE 111 C ? ? ? 1_555 A MSE 112 N ? ? A PHE 128 A MSE 129 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A MSE 112 C ? ? ? 1_555 A LEU 113 N ? ? A MSE 129 A LEU 130 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A LEU 197 C ? ? ? 1_555 A MSE 198 N ? ? A LEU 214 A MSE 215 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A MSE 198 C ? ? ? 1_555 A TYR 199 N ? ? A MSE 215 A TYR 216 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 71 A . ? GLY 88 A PRO 72 A ? PRO 89 A 1 1.37 2 PHE 142 A . ? PHE 159 A PRO 143 A ? PRO 160 A 1 -3.72 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 59 ? TYR A 64 ? VAL A 76 TYR A 81 A 2 GLY A 67 ? VAL A 77 ? GLY A 84 VAL A 94 A 3 ASN A 83 ? TYR A 90 ? ASN A 100 TYR A 107 A 4 VAL A 98 ? THR A 107 ? VAL A 115 THR A 124 A 5 GLY A 110 ? ASP A 120 ? GLY A 127 ASP A 137 B 1 ARG A 154 ? VAL A 155 ? ARG A 171 VAL A 172 B 2 ILE A 174 ? VAL A 175 ? ILE A 191 VAL A 192 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 59 ? N VAL A 76 O GLY A 71 ? O GLY A 88 A 2 3 N LEU A 70 ? N LEU A 87 O SER A 88 ? O SER A 105 A 3 4 N ASN A 83 ? N ASN A 100 O LYS A 106 ? O LYS A 123 A 4 5 N THR A 99 ? N THR A 116 O ILE A 119 ? O ILE A 136 B 1 2 N ARG A 154 ? N ARG A 171 O VAL A 175 ? O VAL A 192 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 1 ? 7 'BINDING SITE FOR RESIDUE SO4 A 1' AC2 Software A SO4 2 ? 4 'BINDING SITE FOR RESIDUE SO4 A 2' AC3 Software A ACT 4 ? 4 'BINDING SITE FOR RESIDUE ACT A 4' AC4 Software A EDO 3 ? 7 'BINDING SITE FOR RESIDUE EDO A 3' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 TYR A 64 ? TYR A 81 . ? 4_566 ? 2 AC1 7 LYS A 65 ? LYS A 82 . ? 4_566 ? 3 AC1 7 LYS A 157 ? LYS A 174 . ? 1_555 ? 4 AC1 7 ARG A 189 ? ARG A 206 . ? 1_555 ? 5 AC1 7 ARG A 200 ? ARG A 217 . ? 4_566 ? 6 AC1 7 HOH F . ? HOH A 240 . ? 4_566 ? 7 AC1 7 HOH F . ? HOH A 306 . ? 4_566 ? 8 AC2 4 THR A 187 ? THR A 204 . ? 1_555 ? 9 AC2 4 PRO A 188 ? PRO A 205 . ? 1_555 ? 10 AC2 4 ARG A 189 ? ARG A 206 . ? 1_555 ? 11 AC2 4 HOH F . ? HOH A 369 . ? 1_555 ? 12 AC3 4 ASN A 83 ? ASN A 100 . ? 1_555 ? 13 AC3 4 TYR A 85 ? TYR A 102 . ? 1_555 ? 14 AC3 4 LYS A 106 ? LYS A 123 . ? 1_555 ? 15 AC3 4 HOH F . ? HOH A 343 . ? 1_555 ? 16 AC4 7 PHE A 30 ? PHE A 47 . ? 1_555 ? 17 AC4 7 LYS A 33 ? LYS A 50 . ? 1_555 ? 18 AC4 7 ASP A 34 ? ASP A 51 . ? 1_555 ? 19 AC4 7 PRO A 35 ? PRO A 52 . ? 1_555 ? 20 AC4 7 ARG A 139 ? ARG A 156 . ? 1_555 ? 21 AC4 7 HOH F . ? HOH A 227 . ? 1_555 ? 22 AC4 7 HOH F . ? HOH A 253 . ? 6_555 ? # _atom_sites.entry_id 3DCZ _atom_sites.fract_transf_matrix[1][1] 0.010974 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009631 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022709 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 18 ? ? ? A . n A 1 2 GLY 2 19 ? ? ? A . n A 1 3 SER 3 20 ? ? ? A . n A 1 4 ASP 4 21 ? ? ? A . n A 1 5 LYS 5 22 ? ? ? A . n A 1 6 ILE 6 23 ? ? ? A . n A 1 7 HIS 7 24 ? ? ? A . n A 1 8 HIS 8 25 ? ? ? A . n A 1 9 HIS 9 26 ? ? ? A . n A 1 10 HIS 10 27 ? ? ? A . n A 1 11 HIS 11 28 ? ? ? A . n A 1 12 HIS 12 29 ? ? ? A . n A 1 13 LYS 13 30 ? ? ? A . n A 1 14 GLY 14 31 ? ? ? A . n A 1 15 LYS 15 32 ? ? ? A . n A 1 16 ILE 16 33 ? ? ? A . n A 1 17 GLN 17 34 ? ? ? A . n A 1 18 GLU 18 35 ? ? ? A . n A 1 19 ALA 19 36 ? ? ? A . n A 1 20 ASP 20 37 37 ASP ASP A . n A 1 21 ASN 21 38 38 ASN ASN A . n A 1 22 ALA 22 39 39 ALA ALA A . n A 1 23 ALA 23 40 40 ALA ALA A . n A 1 24 LYS 24 41 41 LYS LYS A . n A 1 25 LEU 25 42 42 LEU LEU A . n A 1 26 SER 26 43 43 SER SER A . n A 1 27 ALA 27 44 44 ALA ALA A . n A 1 28 ILE 28 45 45 ILE ILE A . n A 1 29 LYS 29 46 46 LYS LYS A . n A 1 30 PHE 30 47 47 PHE PHE A . n A 1 31 VAL 31 48 48 VAL VAL A . n A 1 32 LEU 32 49 49 LEU LEU A . n A 1 33 LYS 33 50 50 LYS LYS A . n A 1 34 ASP 34 51 51 ASP ASP A . n A 1 35 PRO 35 52 52 PRO PRO A . n A 1 36 LEU 36 53 53 LEU LEU A . n A 1 37 THR 37 54 54 THR THR A . n A 1 38 GLY 38 55 55 GLY GLY A . n A 1 39 ASP 39 56 56 ASP ASP A . n A 1 40 TYR 40 57 57 TYR TYR A . n A 1 41 LEU 41 58 58 LEU LEU A . n A 1 42 VAL 42 59 59 VAL VAL A . n A 1 43 ASP 43 60 60 ASP ASP A . n A 1 44 GLU 44 61 61 GLU GLU A . n A 1 45 LYS 45 62 62 LYS LYS A . n A 1 46 GLU 46 63 63 GLU GLU A . n A 1 47 ILE 47 64 64 ILE ILE A . n A 1 48 GLU 48 65 65 GLU GLU A . n A 1 49 GLU 49 66 66 GLU GLU A . n A 1 50 ILE 50 67 67 ILE ILE A . n A 1 51 VAL 51 68 68 VAL VAL A . n A 1 52 LYS 52 69 69 LYS LYS A . n A 1 53 LYS 53 70 70 LYS LYS A . n A 1 54 THR 54 71 71 THR THR A . n A 1 55 GLY 55 72 72 GLY GLY A . n A 1 56 ILE 56 73 73 ILE ILE A . n A 1 57 GLU 57 74 74 GLU GLU A . n A 1 58 THR 58 75 75 THR THR A . n A 1 59 VAL 59 76 76 VAL VAL A . n A 1 60 VAL 60 77 77 VAL VAL A . n A 1 61 LEU 61 78 78 LEU LEU A . n A 1 62 LYS 62 79 79 LYS LYS A . n A 1 63 GLU 63 80 80 GLU GLU A . n A 1 64 TYR 64 81 81 TYR TYR A . n A 1 65 LYS 65 82 82 LYS LYS A . n A 1 66 GLU 66 83 83 GLU GLU A . n A 1 67 GLY 67 84 84 GLY GLY A . n A 1 68 VAL 68 85 85 VAL VAL A . n A 1 69 VAL 69 86 86 VAL VAL A . n A 1 70 LEU 70 87 87 LEU LEU A . n A 1 71 GLY 71 88 88 GLY GLY A . n A 1 72 PRO 72 89 89 PRO PRO A . n A 1 73 LEU 73 90 90 LEU LEU A . n A 1 74 TYR 74 91 91 TYR TYR A . n A 1 75 GLU 75 92 92 GLU GLU A . n A 1 76 PHE 76 93 93 PHE PHE A . n A 1 77 VAL 77 94 94 VAL VAL A . n A 1 78 THR 78 95 95 THR THR A . n A 1 79 LYS 79 96 96 LYS LYS A . n A 1 80 ASP 80 97 97 ASP ASP A . n A 1 81 GLY 81 98 98 GLY GLY A . n A 1 82 ARG 82 99 99 ARG ARG A . n A 1 83 ASN 83 100 100 ASN ASN A . n A 1 84 ALA 84 101 101 ALA ALA A . n A 1 85 TYR 85 102 102 TYR TYR A . n A 1 86 VAL 86 103 103 VAL VAL A . n A 1 87 LEU 87 104 104 LEU LEU A . n A 1 88 SER 88 105 105 SER SER A . n A 1 89 GLY 89 106 106 GLY GLY A . n A 1 90 TYR 90 107 107 TYR TYR A . n A 1 91 ALA 91 108 108 ALA ALA A . n A 1 92 PRO 92 109 109 PRO PRO A . n A 1 93 GLY 93 110 110 GLY GLY A . n A 1 94 PHE 94 111 111 PHE PHE A . n A 1 95 GLY 95 112 ? ? ? A . n A 1 96 GLY 96 113 113 GLY GLY A . n A 1 97 ASN 97 114 114 ASN ASN A . n A 1 98 VAL 98 115 115 VAL VAL A . n A 1 99 THR 99 116 116 THR THR A . n A 1 100 VAL 100 117 117 VAL VAL A . n A 1 101 VAL 101 118 118 VAL VAL A . n A 1 102 ALA 102 119 119 ALA ALA A . n A 1 103 CYS 103 120 120 CYS CYS A . n A 1 104 PHE 104 121 121 PHE PHE A . n A 1 105 ILE 105 122 122 ILE ILE A . n A 1 106 LYS 106 123 123 LYS LYS A . n A 1 107 THR 107 124 124 THR THR A . n A 1 108 GLU 108 125 125 GLU GLU A . n A 1 109 ASP 109 126 126 ASP ASP A . n A 1 110 GLY 110 127 127 GLY GLY A . n A 1 111 PHE 111 128 128 PHE PHE A . n A 1 112 MSE 112 129 129 MSE MSE A . n A 1 113 LEU 113 130 130 LEU LEU A . n A 1 114 ASN 114 131 131 ASN ASN A . n A 1 115 SER 115 132 132 SER SER A . n A 1 116 VAL 116 133 133 VAL VAL A . n A 1 117 ARG 117 134 134 ARG ARG A . n A 1 118 VAL 118 135 135 VAL VAL A . n A 1 119 ILE 119 136 136 ILE ILE A . n A 1 120 ASP 120 137 137 ASP ASP A . n A 1 121 TYR 121 138 138 TYR TYR A . n A 1 122 SER 122 139 139 SER SER A . n A 1 123 GLN 123 140 140 GLN GLN A . n A 1 124 GLU 124 141 ? ? ? A . n A 1 125 THR 125 142 ? ? ? A . n A 1 126 PRO 126 143 ? ? ? A . n A 1 127 GLY 127 144 ? ? ? A . n A 1 128 LEU 128 145 ? ? ? A . n A 1 129 GLY 129 146 ? ? ? A . n A 1 130 ALA 130 147 ? ? ? A . n A 1 131 LYS 131 148 ? ? ? A . n A 1 132 ILE 132 149 ? ? ? A . n A 1 133 GLY 133 150 ? ? ? A . n A 1 134 GLU 134 151 ? ? ? A . n A 1 135 GLU 135 152 152 GLU GLU A . n A 1 136 SER 136 153 153 SER SER A . n A 1 137 ILE 137 154 154 ILE ILE A . n A 1 138 GLN 138 155 155 GLN GLN A . n A 1 139 ARG 139 156 156 ARG ARG A . n A 1 140 ARG 140 157 157 ARG ARG A . n A 1 141 PHE 141 158 158 PHE PHE A . n A 1 142 PHE 142 159 159 PHE PHE A . n A 1 143 PRO 143 160 160 PRO PRO A . n A 1 144 VAL 144 161 161 VAL VAL A . n A 1 145 PRO 145 162 162 PRO PRO A . n A 1 146 PRO 146 163 163 PRO PRO A . n A 1 147 GLU 147 164 164 GLU GLU A . n A 1 148 GLY 148 165 165 GLY GLY A . n A 1 149 LEU 149 166 166 LEU LEU A . n A 1 150 LYS 150 167 167 LYS LYS A . n A 1 151 ASN 151 168 168 ASN ASN A . n A 1 152 GLY 152 169 169 GLY GLY A . n A 1 153 LEU 153 170 170 LEU LEU A . n A 1 154 ARG 154 171 171 ARG ARG A . n A 1 155 VAL 155 172 172 VAL VAL A . n A 1 156 ASP 156 173 173 ASP ASP A . n A 1 157 LYS 157 174 174 LYS LYS A . n A 1 158 ASP 158 175 175 ASP ASP A . n A 1 159 ALA 159 176 176 ALA ALA A . n A 1 160 GLY 160 177 177 GLY GLY A . n A 1 161 LEU 161 178 178 LEU LEU A . n A 1 162 PRO 162 179 179 PRO PRO A . n A 1 163 LYS 163 180 180 LYS LYS A . n A 1 164 GLY 164 181 181 GLY GLY A . n A 1 165 SER 165 182 182 SER SER A . n A 1 166 PRO 166 183 183 PRO PRO A . n A 1 167 GLU 167 184 184 GLU GLU A . n A 1 168 GLU 168 185 185 GLU GLU A . n A 1 169 LEU 169 186 186 LEU LEU A . n A 1 170 LYS 170 187 187 LYS LYS A . n A 1 171 LYS 171 188 188 LYS LYS A . n A 1 172 GLN 172 189 189 GLN GLN A . n A 1 173 GLY 173 190 190 GLY GLY A . n A 1 174 ILE 174 191 191 ILE ILE A . n A 1 175 VAL 175 192 192 VAL VAL A . n A 1 176 LYS 176 193 193 LYS LYS A . n A 1 177 VAL 177 194 194 VAL VAL A . n A 1 178 SER 178 195 195 SER SER A . n A 1 179 ASP 179 196 196 ASP ASP A . n A 1 180 VAL 180 197 197 VAL VAL A . n A 1 181 MSE 181 198 ? ? ? A . n A 1 182 THR 182 199 ? ? ? A . n A 1 183 GLY 183 200 ? ? ? A . n A 1 184 ALA 184 201 ? ? ? A . n A 1 185 THR 185 202 ? ? ? A . n A 1 186 ILE 186 203 203 ILE ILE A . n A 1 187 THR 187 204 204 THR THR A . n A 1 188 PRO 188 205 205 PRO PRO A . n A 1 189 ARG 189 206 206 ARG ARG A . n A 1 190 ALA 190 207 207 ALA ALA A . n A 1 191 VAL 191 208 208 VAL VAL A . n A 1 192 VAL 192 209 209 VAL VAL A . n A 1 193 THR 193 210 210 THR THR A . n A 1 194 ALA 194 211 211 ALA ALA A . n A 1 195 LEU 195 212 212 LEU LEU A . n A 1 196 ASN 196 213 213 ASN ASN A . n A 1 197 LEU 197 214 214 LEU LEU A . n A 1 198 MSE 198 215 215 MSE MSE A . n A 1 199 TYR 199 216 216 TYR TYR A . n A 1 200 ARG 200 217 217 ARG ARG A . n A 1 201 TYR 201 218 218 TYR TYR A . n A 1 202 LEU 202 219 219 LEU LEU A . n A 1 203 GLU 203 220 220 GLU GLU A . n A 1 204 GLU 204 221 221 GLU GLU A . n A 1 205 VAL 205 222 222 VAL VAL A . n A 1 206 SER 206 223 223 SER SER A . n A 1 207 LYS 207 224 224 LYS LYS A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1 1 SO4 SO4 A . C 2 SO4 1 2 2 SO4 SO4 A . D 3 ACT 1 4 4 ACT ACT A . E 4 EDO 1 3 3 EDO EDO A . F 5 HOH 1 225 5 HOH HOH A . F 5 HOH 2 226 6 HOH HOH A . F 5 HOH 3 227 7 HOH HOH A . F 5 HOH 4 228 8 HOH HOH A . F 5 HOH 5 229 9 HOH HOH A . F 5 HOH 6 230 10 HOH HOH A . F 5 HOH 7 231 11 HOH HOH A . F 5 HOH 8 232 12 HOH HOH A . F 5 HOH 9 233 13 HOH HOH A . F 5 HOH 10 234 14 HOH HOH A . F 5 HOH 11 235 15 HOH HOH A . F 5 HOH 12 236 16 HOH HOH A . F 5 HOH 13 237 17 HOH HOH A . F 5 HOH 14 238 18 HOH HOH A . F 5 HOH 15 239 19 HOH HOH A . F 5 HOH 16 240 20 HOH HOH A . F 5 HOH 17 241 21 HOH HOH A . F 5 HOH 18 242 22 HOH HOH A . F 5 HOH 19 243 23 HOH HOH A . F 5 HOH 20 244 24 HOH HOH A . F 5 HOH 21 245 25 HOH HOH A . F 5 HOH 22 246 26 HOH HOH A . F 5 HOH 23 247 27 HOH HOH A . F 5 HOH 24 248 28 HOH HOH A . F 5 HOH 25 249 29 HOH HOH A . F 5 HOH 26 250 30 HOH HOH A . F 5 HOH 27 251 31 HOH HOH A . F 5 HOH 28 252 32 HOH HOH A . F 5 HOH 29 253 33 HOH HOH A . F 5 HOH 30 254 34 HOH HOH A . F 5 HOH 31 255 35 HOH HOH A . F 5 HOH 32 256 36 HOH HOH A . F 5 HOH 33 257 37 HOH HOH A . F 5 HOH 34 258 38 HOH HOH A . F 5 HOH 35 259 39 HOH HOH A . F 5 HOH 36 260 40 HOH HOH A . F 5 HOH 37 261 41 HOH HOH A . F 5 HOH 38 262 42 HOH HOH A . F 5 HOH 39 263 43 HOH HOH A . F 5 HOH 40 264 44 HOH HOH A . F 5 HOH 41 265 45 HOH HOH A . F 5 HOH 42 266 46 HOH HOH A . F 5 HOH 43 267 47 HOH HOH A . F 5 HOH 44 268 48 HOH HOH A . F 5 HOH 45 269 49 HOH HOH A . F 5 HOH 46 270 50 HOH HOH A . F 5 HOH 47 271 51 HOH HOH A . F 5 HOH 48 272 52 HOH HOH A . F 5 HOH 49 273 53 HOH HOH A . F 5 HOH 50 274 54 HOH HOH A . F 5 HOH 51 275 55 HOH HOH A . F 5 HOH 52 276 56 HOH HOH A . F 5 HOH 53 277 57 HOH HOH A . F 5 HOH 54 278 58 HOH HOH A . F 5 HOH 55 279 59 HOH HOH A . F 5 HOH 56 280 60 HOH HOH A . F 5 HOH 57 281 61 HOH HOH A . F 5 HOH 58 282 62 HOH HOH A . F 5 HOH 59 283 63 HOH HOH A . F 5 HOH 60 284 64 HOH HOH A . F 5 HOH 61 285 65 HOH HOH A . F 5 HOH 62 286 66 HOH HOH A . F 5 HOH 63 287 67 HOH HOH A . F 5 HOH 64 288 68 HOH HOH A . F 5 HOH 65 289 69 HOH HOH A . F 5 HOH 66 290 70 HOH HOH A . F 5 HOH 67 291 71 HOH HOH A . F 5 HOH 68 292 72 HOH HOH A . F 5 HOH 69 293 73 HOH HOH A . F 5 HOH 70 294 74 HOH HOH A . F 5 HOH 71 295 75 HOH HOH A . F 5 HOH 72 296 76 HOH HOH A . F 5 HOH 73 297 77 HOH HOH A . F 5 HOH 74 298 78 HOH HOH A . F 5 HOH 75 299 79 HOH HOH A . F 5 HOH 76 300 80 HOH HOH A . F 5 HOH 77 301 81 HOH HOH A . F 5 HOH 78 302 82 HOH HOH A . F 5 HOH 79 303 83 HOH HOH A . F 5 HOH 80 304 84 HOH HOH A . F 5 HOH 81 305 85 HOH HOH A . F 5 HOH 82 306 86 HOH HOH A . F 5 HOH 83 307 87 HOH HOH A . F 5 HOH 84 308 88 HOH HOH A . F 5 HOH 85 309 89 HOH HOH A . F 5 HOH 86 310 90 HOH HOH A . F 5 HOH 87 311 91 HOH HOH A . F 5 HOH 88 312 92 HOH HOH A . F 5 HOH 89 313 93 HOH HOH A . F 5 HOH 90 314 94 HOH HOH A . F 5 HOH 91 315 95 HOH HOH A . F 5 HOH 92 316 96 HOH HOH A . F 5 HOH 93 317 97 HOH HOH A . F 5 HOH 94 318 98 HOH HOH A . F 5 HOH 95 319 99 HOH HOH A . F 5 HOH 96 320 100 HOH HOH A . F 5 HOH 97 321 101 HOH HOH A . F 5 HOH 98 322 102 HOH HOH A . F 5 HOH 99 323 103 HOH HOH A . F 5 HOH 100 324 104 HOH HOH A . F 5 HOH 101 325 105 HOH HOH A . F 5 HOH 102 326 106 HOH HOH A . F 5 HOH 103 327 107 HOH HOH A . F 5 HOH 104 328 108 HOH HOH A . F 5 HOH 105 329 109 HOH HOH A . F 5 HOH 106 330 110 HOH HOH A . F 5 HOH 107 331 111 HOH HOH A . F 5 HOH 108 332 112 HOH HOH A . F 5 HOH 109 333 113 HOH HOH A . F 5 HOH 110 334 114 HOH HOH A . F 5 HOH 111 335 115 HOH HOH A . F 5 HOH 112 336 116 HOH HOH A . F 5 HOH 113 337 117 HOH HOH A . F 5 HOH 114 338 118 HOH HOH A . F 5 HOH 115 339 119 HOH HOH A . F 5 HOH 116 340 120 HOH HOH A . F 5 HOH 117 341 121 HOH HOH A . F 5 HOH 118 342 122 HOH HOH A . F 5 HOH 119 343 123 HOH HOH A . F 5 HOH 120 344 124 HOH HOH A . F 5 HOH 121 345 125 HOH HOH A . F 5 HOH 122 346 126 HOH HOH A . F 5 HOH 123 347 127 HOH HOH A . F 5 HOH 124 348 128 HOH HOH A . F 5 HOH 125 349 129 HOH HOH A . F 5 HOH 126 350 130 HOH HOH A . F 5 HOH 127 351 131 HOH HOH A . F 5 HOH 128 352 132 HOH HOH A . F 5 HOH 129 353 133 HOH HOH A . F 5 HOH 130 354 134 HOH HOH A . F 5 HOH 131 355 135 HOH HOH A . F 5 HOH 132 356 136 HOH HOH A . F 5 HOH 133 357 137 HOH HOH A . F 5 HOH 134 358 138 HOH HOH A . F 5 HOH 135 359 139 HOH HOH A . F 5 HOH 136 360 140 HOH HOH A . F 5 HOH 137 361 141 HOH HOH A . F 5 HOH 138 362 142 HOH HOH A . F 5 HOH 139 363 143 HOH HOH A . F 5 HOH 140 364 144 HOH HOH A . F 5 HOH 141 365 145 HOH HOH A . F 5 HOH 142 366 146 HOH HOH A . F 5 HOH 143 367 147 HOH HOH A . F 5 HOH 144 368 148 HOH HOH A . F 5 HOH 145 369 149 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 112 A MSE 129 ? MET SELENOMETHIONINE 2 A MSE 198 A MSE 215 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-06-24 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 31.2107 _pdbx_refine_tls.origin_y 35.4521 _pdbx_refine_tls.origin_z 18.5391 _pdbx_refine_tls.T[1][1] -0.0385 _pdbx_refine_tls.T[2][2] -0.0296 _pdbx_refine_tls.T[3][3] -0.0461 _pdbx_refine_tls.T[1][2] -0.0145 _pdbx_refine_tls.T[1][3] -0.0078 _pdbx_refine_tls.T[2][3] -0.0066 _pdbx_refine_tls.L[1][1] 1.2594 _pdbx_refine_tls.L[2][2] 1.3301 _pdbx_refine_tls.L[3][3] 1.0959 _pdbx_refine_tls.L[1][2] 0.0061 _pdbx_refine_tls.L[1][3] -0.5280 _pdbx_refine_tls.L[2][3] 0.2736 _pdbx_refine_tls.S[1][1] 0.0064 _pdbx_refine_tls.S[2][2] -0.0045 _pdbx_refine_tls.S[3][3] -0.0019 _pdbx_refine_tls.S[1][2] -0.0414 _pdbx_refine_tls.S[1][3] 0.0615 _pdbx_refine_tls.S[2][3] -0.0051 _pdbx_refine_tls.S[2][1] 0.0989 _pdbx_refine_tls.S[3][1] 0.0431 _pdbx_refine_tls.S[3][2] -0.0387 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 20 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 207 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 37 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 224 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 5 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3DCZ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHH FOLLOWED BY THE TARGET SEQUENCE. THE CLONED CONSTRUCT CONTAINS RESIDUES 30-224 OF THE FULL LENGTH PROTEIN. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 MSE _pdbx_validate_rmsd_angle.auth_seq_id_1 215 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 SE _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 MSE _pdbx_validate_rmsd_angle.auth_seq_id_2 215 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 MSE _pdbx_validate_rmsd_angle.auth_seq_id_3 215 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 83.29 _pdbx_validate_rmsd_angle.angle_target_value 98.90 _pdbx_validate_rmsd_angle.angle_deviation -15.61 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 38 ? ? -98.73 39.92 2 1 THR A 204 ? ? -49.39 108.90 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 37 ? CG ? A ASP 20 CG 2 1 Y 1 A ASP 37 ? OD1 ? A ASP 20 OD1 3 1 Y 1 A ASP 37 ? OD2 ? A ASP 20 OD2 4 1 Y 1 A LYS 62 ? CD ? A LYS 45 CD 5 1 Y 1 A LYS 62 ? CE ? A LYS 45 CE 6 1 Y 1 A LYS 62 ? NZ ? A LYS 45 NZ 7 1 Y 1 A LYS 82 ? CD ? A LYS 65 CD 8 1 Y 1 A LYS 82 ? CE ? A LYS 65 CE 9 1 Y 1 A LYS 82 ? NZ ? A LYS 65 NZ 10 1 Y 1 A ASN 114 ? CG ? A ASN 97 CG 11 1 Y 1 A ASN 114 ? OD1 ? A ASN 97 OD1 12 1 Y 1 A ASN 114 ? ND2 ? A ASN 97 ND2 13 1 Y 1 A GLU 125 ? CG ? A GLU 108 CG 14 1 Y 1 A GLU 125 ? CD ? A GLU 108 CD 15 1 Y 1 A GLU 125 ? OE1 ? A GLU 108 OE1 16 1 Y 1 A GLU 125 ? OE2 ? A GLU 108 OE2 17 1 Y 1 A SER 139 ? OG ? A SER 122 OG 18 1 Y 1 A GLN 140 ? CG ? A GLN 123 CG 19 1 Y 1 A GLN 140 ? CD ? A GLN 123 CD 20 1 Y 1 A GLN 140 ? OE1 ? A GLN 123 OE1 21 1 Y 1 A GLN 140 ? NE2 ? A GLN 123 NE2 22 1 Y 1 A GLU 152 ? CG ? A GLU 135 CG 23 1 Y 1 A GLU 152 ? CD ? A GLU 135 CD 24 1 Y 1 A GLU 152 ? OE1 ? A GLU 135 OE1 25 1 Y 1 A GLU 152 ? OE2 ? A GLU 135 OE2 26 1 Y 1 A LYS 174 ? CE ? A LYS 157 CE 27 1 Y 1 A LYS 174 ? NZ ? A LYS 157 NZ 28 1 Y 1 A LYS 180 ? CD ? A LYS 163 CD 29 1 Y 1 A LYS 180 ? CE ? A LYS 163 CE 30 1 Y 1 A LYS 180 ? NZ ? A LYS 163 NZ 31 1 Y 1 A LYS 188 ? CE ? A LYS 171 CE 32 1 Y 1 A LYS 188 ? NZ ? A LYS 171 NZ 33 1 Y 1 A VAL 197 ? CG1 ? A VAL 180 CG1 34 1 Y 1 A VAL 197 ? CG2 ? A VAL 180 CG2 35 1 Y 1 A ILE 203 ? N ? A ILE 186 N 36 1 Y 1 A ILE 203 ? CA ? A ILE 186 CA 37 1 Y 1 A ILE 203 ? CB ? A ILE 186 CB 38 1 Y 1 A ILE 203 ? CG1 ? A ILE 186 CG1 39 1 Y 1 A ILE 203 ? CG2 ? A ILE 186 CG2 40 1 Y 1 A ILE 203 ? CD1 ? A ILE 186 CD1 41 1 Y 1 A LYS 224 ? CG ? A LYS 207 CG 42 1 Y 1 A LYS 224 ? CD ? A LYS 207 CD 43 1 Y 1 A LYS 224 ? CE ? A LYS 207 CE 44 1 Y 1 A LYS 224 ? NZ ? A LYS 207 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 18 ? A MSE 1 2 1 Y 1 A GLY 19 ? A GLY 2 3 1 Y 1 A SER 20 ? A SER 3 4 1 Y 1 A ASP 21 ? A ASP 4 5 1 Y 1 A LYS 22 ? A LYS 5 6 1 Y 1 A ILE 23 ? A ILE 6 7 1 Y 1 A HIS 24 ? A HIS 7 8 1 Y 1 A HIS 25 ? A HIS 8 9 1 Y 1 A HIS 26 ? A HIS 9 10 1 Y 1 A HIS 27 ? A HIS 10 11 1 Y 1 A HIS 28 ? A HIS 11 12 1 Y 1 A HIS 29 ? A HIS 12 13 1 Y 1 A LYS 30 ? A LYS 13 14 1 Y 1 A GLY 31 ? A GLY 14 15 1 Y 1 A LYS 32 ? A LYS 15 16 1 Y 1 A ILE 33 ? A ILE 16 17 1 Y 1 A GLN 34 ? A GLN 17 18 1 Y 1 A GLU 35 ? A GLU 18 19 1 Y 1 A ALA 36 ? A ALA 19 20 1 Y 1 A GLY 112 ? A GLY 95 21 1 Y 1 A GLU 141 ? A GLU 124 22 1 Y 1 A THR 142 ? A THR 125 23 1 Y 1 A PRO 143 ? A PRO 126 24 1 Y 1 A GLY 144 ? A GLY 127 25 1 Y 1 A LEU 145 ? A LEU 128 26 1 Y 1 A GLY 146 ? A GLY 129 27 1 Y 1 A ALA 147 ? A ALA 130 28 1 Y 1 A LYS 148 ? A LYS 131 29 1 Y 1 A ILE 149 ? A ILE 132 30 1 Y 1 A GLY 150 ? A GLY 133 31 1 Y 1 A GLU 151 ? A GLU 134 32 1 Y 1 A MSE 198 ? A MSE 181 33 1 Y 1 A THR 199 ? A THR 182 34 1 Y 1 A GLY 200 ? A GLY 183 35 1 Y 1 A ALA 201 ? A ALA 184 36 1 Y 1 A THR 202 ? A THR 185 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'ACETATE ION' ACT 4 1,2-ETHANEDIOL EDO 5 water HOH #