data_3DD2
#
_entry.id 3DD2
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.399
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3DD2 pdb_00003dd2 10.2210/pdb3dd2/pdb
NDB PR0348 ? ?
RCSB RCSB047886 ? ?
WWPDB D_1000047886 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2008-11-11
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2013-02-27
4 'Structure model' 1 3 2017-10-25
5 'Structure model' 1 4 2023-08-30
6 'Structure model' 1 5 2024-11-20
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Atomic model'
2 2 'Structure model' 'Database references'
3 2 'Structure model' 'Derived calculations'
4 2 'Structure model' 'Non-polymer description'
5 2 'Structure model' 'Structure summary'
6 2 'Structure model' 'Version format compliance'
7 3 'Structure model' Other
8 4 'Structure model' 'Refinement description'
9 5 'Structure model' 'Data collection'
10 5 'Structure model' 'Database references'
11 5 'Structure model' 'Derived calculations'
12 5 'Structure model' 'Refinement description'
13 6 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' software
2 5 'Structure model' chem_comp_atom
3 5 'Structure model' chem_comp_bond
4 5 'Structure model' database_2
5 5 'Structure model' pdbx_initial_refinement_model
6 5 'Structure model' pdbx_struct_conn_angle
7 5 'Structure model' struct_conn
8 5 'Structure model' struct_site
9 6 'Structure model' pdbx_entry_details
10 6 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 5 'Structure model' '_database_2.pdbx_DOI'
2 5 'Structure model' '_database_2.pdbx_database_accession'
3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'
4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id'
11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'
12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
20 5 'Structure model' '_pdbx_struct_conn_angle.value'
21 5 'Structure model' '_struct_conn.conn_type_id'
22 5 'Structure model' '_struct_conn.id'
23 5 'Structure model' '_struct_conn.pdbx_dist_value'
24 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
25 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
26 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
27 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
28 5 'Structure model' '_struct_conn.ptnr1_label_asym_id'
29 5 'Structure model' '_struct_conn.ptnr1_label_atom_id'
30 5 'Structure model' '_struct_conn.ptnr1_label_comp_id'
31 5 'Structure model' '_struct_conn.ptnr1_label_seq_id'
32 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
33 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
34 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
35 5 'Structure model' '_struct_conn.ptnr2_label_asym_id'
36 5 'Structure model' '_struct_conn.ptnr2_label_atom_id'
37 5 'Structure model' '_struct_conn.ptnr2_label_comp_id'
38 5 'Structure model' '_struct_conn.ptnr2_label_seq_id'
39 5 'Structure model' '_struct_site.pdbx_auth_asym_id'
40 5 'Structure model' '_struct_site.pdbx_auth_comp_id'
41 5 'Structure model' '_struct_site.pdbx_auth_seq_id'
42 6 'Structure model' '_pdbx_entry_details.has_protein_modification'
#
_pdbx_database_status.entry_id 3DD2
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 2008-06-04
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Long, S.B.' 1
'Sullenger, B.A.' 2
#
_citation.id primary
_citation.title 'Crystal structure of an RNA aptamer bound to thrombin.'
_citation.journal_abbrev Rna
_citation.journal_volume 14
_citation.page_first 2504
_citation.page_last 2512
_citation.year 2008
_citation.journal_id_ASTM RNARFU
_citation.country UK
_citation.journal_id_ISSN 1355-8382
_citation.journal_id_CSD 2122
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 18971322
_citation.pdbx_database_id_DOI 10.1261/rna.1239308
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Long, S.B.' 1 ?
primary 'Long, M.B.' 2 ?
primary 'White, R.R.' 3 ?
primary 'Sullenger, B.A.' 4 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat 'Thrombin light chain' 3489.881
1 ? ? ? ?
2 polymer nat 'Thrombin heavy chain' 29651.105
1 3.4.21.5 ? ? ?
3 polymer syn 'RNA (26-MER)' 8368.987
1 ? ? ? ?
4 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120
3 ? ? ? ?
5 non-polymer syn 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 453.986
1 ? ? ? ?
6 non-polymer syn 'MAGNESIUM ION' 24.305
2 ? ? ? ?
7 non-polymer syn 'HEXAETHYLENE GLYCOL' 282.331
1 ? ? ? ?
8 non-polymer syn 'ACETIC ACID' 60.052
6 ? ? ? ?
9 water nat water 18.015
253 ? ? ? ?
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no no GEADCGLRPLFEKKSLEDKTERELLESYID GEADCGLRPLFEKKSLEDKTERELLESYID L ?
2 'polypeptide(L)' no no
;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM
LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL
QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY
THVFRLKKWIQKVIDQFG
;
;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM
LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL
QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY
THVFRLKKWIQKVIDQFG
;
H ?
3 polyribonucleotide no yes 'GGGAA(CFL)AAAG(CFL)(UFT)GAAG(UFT)A(CFL)(UFT)(UFT)A(CFL)(CFL)(CFL)(DT)' GGGAACAAAGCUGAAGUACUUACCCT B ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
4 'DI(HYDROXYETHYL)ETHER' PEG
5 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 0G6
6 'MAGNESIUM ION' MG
7 'HEXAETHYLENE GLYCOL' P6G
8 'ACETIC ACID' ACY
9 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 GLU n
1 3 ALA n
1 4 ASP n
1 5 CYS n
1 6 GLY n
1 7 LEU n
1 8 ARG n
1 9 PRO n
1 10 LEU n
1 11 PHE n
1 12 GLU n
1 13 LYS n
1 14 LYS n
1 15 SER n
1 16 LEU n
1 17 GLU n
1 18 ASP n
1 19 LYS n
1 20 THR n
1 21 GLU n
1 22 ARG n
1 23 GLU n
1 24 LEU n
1 25 LEU n
1 26 GLU n
1 27 SER n
1 28 TYR n
1 29 ILE n
1 30 ASP n
2 1 ILE n
2 2 VAL n
2 3 GLU n
2 4 GLY n
2 5 SER n
2 6 ASP n
2 7 ALA n
2 8 GLU n
2 9 ILE n
2 10 GLY n
2 11 MET n
2 12 SER n
2 13 PRO n
2 14 TRP n
2 15 GLN n
2 16 VAL n
2 17 MET n
2 18 LEU n
2 19 PHE n
2 20 ARG n
2 21 LYS n
2 22 SER n
2 23 PRO n
2 24 GLN n
2 25 GLU n
2 26 LEU n
2 27 LEU n
2 28 CYS n
2 29 GLY n
2 30 ALA n
2 31 SER n
2 32 LEU n
2 33 ILE n
2 34 SER n
2 35 ASP n
2 36 ARG n
2 37 TRP n
2 38 VAL n
2 39 LEU n
2 40 THR n
2 41 ALA n
2 42 ALA n
2 43 HIS n
2 44 CYS n
2 45 LEU n
2 46 LEU n
2 47 TYR n
2 48 PRO n
2 49 PRO n
2 50 TRP n
2 51 ASP n
2 52 LYS n
2 53 ASN n
2 54 PHE n
2 55 THR n
2 56 GLU n
2 57 ASN n
2 58 ASP n
2 59 LEU n
2 60 LEU n
2 61 VAL n
2 62 ARG n
2 63 ILE n
2 64 GLY n
2 65 LYS n
2 66 HIS n
2 67 SER n
2 68 ARG n
2 69 THR n
2 70 ARG n
2 71 TYR n
2 72 GLU n
2 73 ARG n
2 74 ASN n
2 75 ILE n
2 76 GLU n
2 77 LYS n
2 78 ILE n
2 79 SER n
2 80 MET n
2 81 LEU n
2 82 GLU n
2 83 LYS n
2 84 ILE n
2 85 TYR n
2 86 ILE n
2 87 HIS n
2 88 PRO n
2 89 ARG n
2 90 TYR n
2 91 ASN n
2 92 TRP n
2 93 ARG n
2 94 GLU n
2 95 ASN n
2 96 LEU n
2 97 ASP n
2 98 ARG n
2 99 ASP n
2 100 ILE n
2 101 ALA n
2 102 LEU n
2 103 MET n
2 104 LYS n
2 105 LEU n
2 106 LYS n
2 107 LYS n
2 108 PRO n
2 109 VAL n
2 110 ALA n
2 111 PHE n
2 112 SER n
2 113 ASP n
2 114 TYR n
2 115 ILE n
2 116 HIS n
2 117 PRO n
2 118 VAL n
2 119 CYS n
2 120 LEU n
2 121 PRO n
2 122 ASP n
2 123 ARG n
2 124 GLU n
2 125 THR n
2 126 ALA n
2 127 ALA n
2 128 SER n
2 129 LEU n
2 130 LEU n
2 131 GLN n
2 132 ALA n
2 133 GLY n
2 134 TYR n
2 135 LYS n
2 136 GLY n
2 137 ARG n
2 138 VAL n
2 139 THR n
2 140 GLY n
2 141 TRP n
2 142 GLY n
2 143 ASN n
2 144 LEU n
2 145 LYS n
2 146 GLU n
2 147 THR n
2 148 TRP n
2 149 THR n
2 150 ALA n
2 151 ASN n
2 152 VAL n
2 153 GLY n
2 154 LYS n
2 155 GLY n
2 156 GLN n
2 157 PRO n
2 158 SER n
2 159 VAL n
2 160 LEU n
2 161 GLN n
2 162 VAL n
2 163 VAL n
2 164 ASN n
2 165 LEU n
2 166 PRO n
2 167 ILE n
2 168 VAL n
2 169 GLU n
2 170 ARG n
2 171 PRO n
2 172 VAL n
2 173 CYS n
2 174 LYS n
2 175 ASP n
2 176 SER n
2 177 THR n
2 178 ARG n
2 179 ILE n
2 180 ARG n
2 181 ILE n
2 182 THR n
2 183 ASP n
2 184 ASN n
2 185 MET n
2 186 PHE n
2 187 CYS n
2 188 ALA n
2 189 GLY n
2 190 TYR n
2 191 LYS n
2 192 PRO n
2 193 ASP n
2 194 GLU n
2 195 GLY n
2 196 LYS n
2 197 ARG n
2 198 GLY n
2 199 ASP n
2 200 ALA n
2 201 CYS n
2 202 GLU n
2 203 GLY n
2 204 ASP n
2 205 SER n
2 206 GLY n
2 207 GLY n
2 208 PRO n
2 209 PHE n
2 210 VAL n
2 211 MET n
2 212 LYS n
2 213 SER n
2 214 PRO n
2 215 PHE n
2 216 ASN n
2 217 ASN n
2 218 ARG n
2 219 TRP n
2 220 TYR n
2 221 GLN n
2 222 MET n
2 223 GLY n
2 224 ILE n
2 225 VAL n
2 226 SER n
2 227 TRP n
2 228 GLY n
2 229 GLU n
2 230 GLY n
2 231 CYS n
2 232 ASP n
2 233 ARG n
2 234 ASP n
2 235 GLY n
2 236 LYS n
2 237 TYR n
2 238 GLY n
2 239 PHE n
2 240 TYR n
2 241 THR n
2 242 HIS n
2 243 VAL n
2 244 PHE n
2 245 ARG n
2 246 LEU n
2 247 LYS n
2 248 LYS n
2 249 TRP n
2 250 ILE n
2 251 GLN n
2 252 LYS n
2 253 VAL n
2 254 ILE n
2 255 ASP n
2 256 GLN n
2 257 PHE n
2 258 GLY n
3 1 G n
3 2 G n
3 3 G n
3 4 A n
3 5 A n
3 6 CFL n
3 7 A n
3 8 A n
3 9 A n
3 10 G n
3 11 CFL n
3 12 UFT n
3 13 G n
3 14 A n
3 15 A n
3 16 G n
3 17 UFT n
3 18 A n
3 19 CFL n
3 20 UFT n
3 21 UFT n
3 22 A n
3 23 CFL n
3 24 CFL n
3 25 CFL n
3 26 DT n
#
loop_
_entity_src_nat.entity_id
_entity_src_nat.pdbx_src_id
_entity_src_nat.pdbx_alt_source_flag
_entity_src_nat.pdbx_beg_seq_num
_entity_src_nat.pdbx_end_seq_num
_entity_src_nat.common_name
_entity_src_nat.pdbx_organism_scientific
_entity_src_nat.pdbx_ncbi_taxonomy_id
_entity_src_nat.genus
_entity_src_nat.species
_entity_src_nat.strain
_entity_src_nat.tissue
_entity_src_nat.tissue_fraction
_entity_src_nat.pdbx_secretion
_entity_src_nat.pdbx_fragment
_entity_src_nat.pdbx_variant
_entity_src_nat.pdbx_cell_line
_entity_src_nat.pdbx_atcc
_entity_src_nat.pdbx_cellular_location
_entity_src_nat.pdbx_organ
_entity_src_nat.pdbx_organelle
_entity_src_nat.pdbx_cell
_entity_src_nat.pdbx_plasmid_name
_entity_src_nat.pdbx_plasmid_details
_entity_src_nat.details
1 1 sample ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
2 1 sample ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
0G6 peptide-like . 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide'
PPACK 'C21 H34 Cl N6 O3 1' 453.986
A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O7 P' 347.221
ACY non-polymer . 'ACETIC ACID' ?
'C2 H4 O2' 60.052
ALA 'L-peptide linking' y ALANINE ?
'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ?
'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ?
'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ?
'C4 H7 N O4' 133.103
CFL 'DNA linking' n '4-amino-1-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranosyl)pyrimidin-2(1H)-one'
"2'-FLUORO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" 'C9 H13 F N3 O7 P' 325.188
CYS 'L-peptide linking' y CYSTEINE ?
'C3 H7 N O2 S' 121.158
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ?
'C10 H15 N2 O8 P' 322.208
G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O8 P' 363.221
GLN 'L-peptide linking' y GLUTAMINE ?
'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ?
'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ?
'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ?
'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ?
'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ?
'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ?
'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ?
'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ?
'C5 H11 N O2 S' 149.211
MG non-polymer . 'MAGNESIUM ION' ?
'Mg 2' 24.305
P6G non-polymer . 'HEXAETHYLENE GLYCOL'
'POLYETHYLENE GLYCOL PEG400' 'C12 H26 O7' 282.331
PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ?
'C4 H10 O3' 106.120
PHE 'L-peptide linking' y PHENYLALANINE ?
'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ?
'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ?
'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ?
'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ?
'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ?
'C9 H11 N O3' 181.189
UFT 'DNA linking' n
;2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate)
;
? 'C9 H12 F N2 O8 P' 326.172
VAL 'L-peptide linking' y VALINE ?
'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 1 1 GLY GLY L D n
A 1 2 GLU 2 1 1 GLU GLU L C n
A 1 3 ALA 3 1 1 ALA ALA L B n
A 1 4 ASP 4 1 1 ASP ASP L A n
A 1 5 CYS 5 1 1 CYS CYS L . n
A 1 6 GLY 6 2 2 GLY GLY L . n
A 1 7 LEU 7 3 3 LEU LEU L . n
A 1 8 ARG 8 4 4 ARG ARG L . n
A 1 9 PRO 9 5 5 PRO PRO L . n
A 1 10 LEU 10 6 6 LEU LEU L . n
A 1 11 PHE 11 7 7 PHE PHE L . n
A 1 12 GLU 12 8 8 GLU GLU L . n
A 1 13 LYS 13 9 9 LYS LYS L . n
A 1 14 LYS 14 10 10 LYS LYS L . n
A 1 15 SER 15 11 11 SER SER L . n
A 1 16 LEU 16 12 12 LEU LEU L . n
A 1 17 GLU 17 13 13 GLU GLU L . n
A 1 18 ASP 18 14 14 ASP ASP L . n
A 1 19 LYS 19 14 14 LYS LYS L A n
A 1 20 THR 20 14 14 THR THR L B n
A 1 21 GLU 21 14 14 GLU GLU L C n
A 1 22 ARG 22 14 14 ARG ARG L D n
A 1 23 GLU 23 14 14 GLU GLU L E n
A 1 24 LEU 24 14 14 LEU LEU L F n
A 1 25 LEU 25 14 14 LEU LEU L G n
A 1 26 GLU 26 14 14 GLU GLU L H n
A 1 27 SER 27 14 14 SER SER L I n
A 1 28 TYR 28 14 14 TYR TYR L J n
A 1 29 ILE 29 14 14 ILE ILE L K n
A 1 30 ASP 30 14 14 ASP ASP L L n
B 2 1 ILE 1 16 16 ILE ILE H . n
B 2 2 VAL 2 17 17 VAL VAL H . n
B 2 3 GLU 3 18 18 GLU GLU H . n
B 2 4 GLY 4 19 19 GLY GLY H . n
B 2 5 SER 5 20 20 SER SER H . n
B 2 6 ASP 6 21 21 ASP ASP H . n
B 2 7 ALA 7 22 22 ALA ALA H . n
B 2 8 GLU 8 23 23 GLU GLU H . n
B 2 9 ILE 9 24 24 ILE ILE H . n
B 2 10 GLY 10 25 25 GLY GLY H . n
B 2 11 MET 11 26 26 MET MET H . n
B 2 12 SER 12 27 27 SER SER H . n
B 2 13 PRO 13 28 28 PRO PRO H . n
B 2 14 TRP 14 29 29 TRP TRP H . n
B 2 15 GLN 15 30 30 GLN GLN H . n
B 2 16 VAL 16 31 31 VAL VAL H . n
B 2 17 MET 17 32 32 MET MET H . n
B 2 18 LEU 18 33 33 LEU LEU H . n
B 2 19 PHE 19 34 34 PHE PHE H . n
B 2 20 ARG 20 35 35 ARG ARG H . n
B 2 21 LYS 21 36 36 LYS LYS H . n
B 2 22 SER 22 36 36 SER SER H A n
B 2 23 PRO 23 37 37 PRO PRO H . n
B 2 24 GLN 24 38 38 GLN GLN H . n
B 2 25 GLU 25 39 39 GLU GLU H . n
B 2 26 LEU 26 40 40 LEU LEU H . n
B 2 27 LEU 27 41 41 LEU LEU H . n
B 2 28 CYS 28 42 42 CYS CYS H . n
B 2 29 GLY 29 43 43 GLY GLY H . n
B 2 30 ALA 30 44 44 ALA ALA H . n
B 2 31 SER 31 45 45 SER SER H . n
B 2 32 LEU 32 46 46 LEU LEU H . n
B 2 33 ILE 33 47 47 ILE ILE H . n
B 2 34 SER 34 48 48 SER SER H . n
B 2 35 ASP 35 49 49 ASP ASP H . n
B 2 36 ARG 36 50 50 ARG ARG H . n
B 2 37 TRP 37 51 51 TRP TRP H . n
B 2 38 VAL 38 52 52 VAL VAL H . n
B 2 39 LEU 39 53 53 LEU LEU H . n
B 2 40 THR 40 54 54 THR THR H . n
B 2 41 ALA 41 55 55 ALA ALA H . n
B 2 42 ALA 42 56 56 ALA ALA H . n
B 2 43 HIS 43 57 57 HIS HIS H . n
B 2 44 CYS 44 58 58 CYS CYS H . n
B 2 45 LEU 45 59 59 LEU LEU H . n
B 2 46 LEU 46 60 60 LEU LEU H . n
B 2 47 TYR 47 60 60 TYR TYR H A n
B 2 48 PRO 48 60 60 PRO PRO H B n
B 2 49 PRO 49 60 60 PRO PRO H C n
B 2 50 TRP 50 60 60 TRP TRP H D n
B 2 51 ASP 51 60 60 ASP ASP H E n
B 2 52 LYS 52 60 60 LYS LYS H F n
B 2 53 ASN 53 60 60 ASN ASN H G n
B 2 54 PHE 54 60 60 PHE PHE H H n
B 2 55 THR 55 60 60 THR THR H I n
B 2 56 GLU 56 61 61 GLU GLU H . n
B 2 57 ASN 57 62 62 ASN ASN H . n
B 2 58 ASP 58 63 63 ASP ASP H . n
B 2 59 LEU 59 64 64 LEU LEU H . n
B 2 60 LEU 60 65 65 LEU LEU H . n
B 2 61 VAL 61 66 66 VAL VAL H . n
B 2 62 ARG 62 67 67 ARG ARG H . n
B 2 63 ILE 63 68 68 ILE ILE H . n
B 2 64 GLY 64 69 69 GLY GLY H . n
B 2 65 LYS 65 70 70 LYS LYS H . n
B 2 66 HIS 66 71 71 HIS HIS H . n
B 2 67 SER 67 72 72 SER SER H . n
B 2 68 ARG 68 73 73 ARG ARG H . n
B 2 69 THR 69 74 74 THR THR H . n
B 2 70 ARG 70 75 75 ARG ARG H . n
B 2 71 TYR 71 76 76 TYR TYR H . n
B 2 72 GLU 72 77 77 GLU GLU H . n
B 2 73 ARG 73 77 77 ARG ARG H A n
B 2 74 ASN 74 78 78 ASN ASN H . n
B 2 75 ILE 75 79 79 ILE ILE H . n
B 2 76 GLU 76 80 80 GLU GLU H . n
B 2 77 LYS 77 81 81 LYS LYS H . n
B 2 78 ILE 78 82 82 ILE ILE H . n
B 2 79 SER 79 83 83 SER SER H . n
B 2 80 MET 80 84 84 MET MET H . n
B 2 81 LEU 81 85 85 LEU LEU H . n
B 2 82 GLU 82 86 86 GLU GLU H . n
B 2 83 LYS 83 87 87 LYS LYS H . n
B 2 84 ILE 84 88 88 ILE ILE H . n
B 2 85 TYR 85 89 89 TYR TYR H . n
B 2 86 ILE 86 90 90 ILE ILE H . n
B 2 87 HIS 87 91 91 HIS HIS H . n
B 2 88 PRO 88 92 92 PRO PRO H . n
B 2 89 ARG 89 93 93 ARG ARG H . n
B 2 90 TYR 90 94 94 TYR TYR H . n
B 2 91 ASN 91 95 95 ASN ASN H . n
B 2 92 TRP 92 96 96 TRP TRP H . n
B 2 93 ARG 93 97 97 ARG ARG H . n
B 2 94 GLU 94 97 97 GLU GLU H A n
B 2 95 ASN 95 98 98 ASN ASN H . n
B 2 96 LEU 96 99 99 LEU LEU H . n
B 2 97 ASP 97 100 100 ASP ASP H . n
B 2 98 ARG 98 101 101 ARG ARG H . n
B 2 99 ASP 99 102 102 ASP ASP H . n
B 2 100 ILE 100 103 103 ILE ILE H . n
B 2 101 ALA 101 104 104 ALA ALA H . n
B 2 102 LEU 102 105 105 LEU LEU H . n
B 2 103 MET 103 106 106 MET MET H . n
B 2 104 LYS 104 107 107 LYS LYS H . n
B 2 105 LEU 105 108 108 LEU LEU H . n
B 2 106 LYS 106 109 109 LYS LYS H . n
B 2 107 LYS 107 110 110 LYS LYS H . n
B 2 108 PRO 108 111 111 PRO PRO H . n
B 2 109 VAL 109 112 112 VAL VAL H . n
B 2 110 ALA 110 113 113 ALA ALA H . n
B 2 111 PHE 111 114 114 PHE PHE H . n
B 2 112 SER 112 115 115 SER SER H . n
B 2 113 ASP 113 116 116 ASP ASP H . n
B 2 114 TYR 114 117 117 TYR TYR H . n
B 2 115 ILE 115 118 118 ILE ILE H . n
B 2 116 HIS 116 119 119 HIS HIS H . n
B 2 117 PRO 117 120 120 PRO PRO H . n
B 2 118 VAL 118 121 121 VAL VAL H . n
B 2 119 CYS 119 122 122 CYS CYS H . n
B 2 120 LEU 120 123 123 LEU LEU H . n
B 2 121 PRO 121 124 124 PRO PRO H . n
B 2 122 ASP 122 125 125 ASP ASP H . n
B 2 123 ARG 123 126 126 ARG ARG H . n
B 2 124 GLU 124 127 127 GLU GLU H . n
B 2 125 THR 125 128 128 THR THR H . n
B 2 126 ALA 126 129 129 ALA ALA H . n
B 2 127 ALA 127 129 129 ALA ALA H A n
B 2 128 SER 128 129 129 SER SER H B n
B 2 129 LEU 129 129 129 LEU LEU H C n
B 2 130 LEU 130 130 130 LEU LEU H . n
B 2 131 GLN 131 131 131 GLN GLN H . n
B 2 132 ALA 132 132 132 ALA ALA H . n
B 2 133 GLY 133 133 133 GLY GLY H . n
B 2 134 TYR 134 134 134 TYR TYR H . n
B 2 135 LYS 135 135 135 LYS LYS H . n
B 2 136 GLY 136 136 136 GLY GLY H . n
B 2 137 ARG 137 137 137 ARG ARG H . n
B 2 138 VAL 138 138 138 VAL VAL H . n
B 2 139 THR 139 139 139 THR THR H . n
B 2 140 GLY 140 140 140 GLY GLY H . n
B 2 141 TRP 141 141 141 TRP TRP H . n
B 2 142 GLY 142 142 142 GLY GLY H . n
B 2 143 ASN 143 143 143 ASN ASN H . n
B 2 144 LEU 144 144 144 LEU LEU H . n
B 2 145 LYS 145 145 145 LYS LYS H . n
B 2 146 GLU 146 146 146 GLU GLU H . n
B 2 147 THR 147 147 147 THR THR H . n
B 2 148 TRP 148 148 148 TRP TRP H . n
B 2 149 THR 149 149 149 THR THR H . n
B 2 150 ALA 150 149 149 ALA ALA H A n
B 2 151 ASN 151 149 149 ASN ASN H B n
B 2 152 VAL 152 149 149 VAL VAL H C n
B 2 153 GLY 153 149 149 GLY GLY H D n
B 2 154 LYS 154 149 149 LYS LYS H E n
B 2 155 GLY 155 150 150 GLY GLY H . n
B 2 156 GLN 156 151 151 GLN GLN H . n
B 2 157 PRO 157 152 152 PRO PRO H . n
B 2 158 SER 158 153 153 SER SER H . n
B 2 159 VAL 159 154 154 VAL VAL H . n
B 2 160 LEU 160 155 155 LEU LEU H . n
B 2 161 GLN 161 156 156 GLN GLN H . n
B 2 162 VAL 162 157 157 VAL VAL H . n
B 2 163 VAL 163 158 158 VAL VAL H . n
B 2 164 ASN 164 159 159 ASN ASN H . n
B 2 165 LEU 165 160 160 LEU LEU H . n
B 2 166 PRO 166 161 161 PRO PRO H . n
B 2 167 ILE 167 162 162 ILE ILE H . n
B 2 168 VAL 168 163 163 VAL VAL H . n
B 2 169 GLU 169 164 164 GLU GLU H . n
B 2 170 ARG 170 165 165 ARG ARG H . n
B 2 171 PRO 171 166 166 PRO PRO H . n
B 2 172 VAL 172 167 167 VAL VAL H . n
B 2 173 CYS 173 168 168 CYS CYS H . n
B 2 174 LYS 174 169 169 LYS LYS H . n
B 2 175 ASP 175 170 170 ASP ASP H . n
B 2 176 SER 176 171 171 SER SER H . n
B 2 177 THR 177 172 172 THR THR H . n
B 2 178 ARG 178 173 173 ARG ARG H . n
B 2 179 ILE 179 174 174 ILE ILE H . n
B 2 180 ARG 180 175 175 ARG ARG H . n
B 2 181 ILE 181 176 176 ILE ILE H . n
B 2 182 THR 182 177 177 THR THR H . n
B 2 183 ASP 183 178 178 ASP ASP H . n
B 2 184 ASN 184 179 179 ASN ASN H . n
B 2 185 MET 185 180 180 MET MET H . n
B 2 186 PHE 186 181 181 PHE PHE H . n
B 2 187 CYS 187 182 182 CYS CYS H . n
B 2 188 ALA 188 183 183 ALA ALA H . n
B 2 189 GLY 189 184 184 GLY GLY H . n
B 2 190 TYR 190 184 184 TYR TYR H A n
B 2 191 LYS 191 185 185 LYS LYS H . n
B 2 192 PRO 192 186 186 PRO PRO H . n
B 2 193 ASP 193 186 186 ASP ASP H A n
B 2 194 GLU 194 186 186 GLU GLU H B n
B 2 195 GLY 195 186 186 GLY GLY H C n
B 2 196 LYS 196 186 186 LYS LYS H D n
B 2 197 ARG 197 187 187 ARG ARG H . n
B 2 198 GLY 198 188 188 GLY GLY H . n
B 2 199 ASP 199 189 189 ASP ASP H . n
B 2 200 ALA 200 190 190 ALA ALA H . n
B 2 201 CYS 201 191 191 CYS CYS H . n
B 2 202 GLU 202 192 192 GLU GLU H . n
B 2 203 GLY 203 193 193 GLY GLY H . n
B 2 204 ASP 204 194 194 ASP ASP H . n
B 2 205 SER 205 195 195 SER SER H . n
B 2 206 GLY 206 196 196 GLY GLY H . n
B 2 207 GLY 207 197 197 GLY GLY H . n
B 2 208 PRO 208 198 198 PRO PRO H . n
B 2 209 PHE 209 199 199 PHE PHE H . n
B 2 210 VAL 210 200 200 VAL VAL H . n
B 2 211 MET 211 201 201 MET MET H . n
B 2 212 LYS 212 202 202 LYS LYS H . n
B 2 213 SER 213 203 203 SER SER H . n
B 2 214 PRO 214 204 204 PRO PRO H . n
B 2 215 PHE 215 204 204 PHE PHE H A n
B 2 216 ASN 216 204 204 ASN ASN H B n
B 2 217 ASN 217 205 205 ASN ASN H . n
B 2 218 ARG 218 206 206 ARG ARG H . n
B 2 219 TRP 219 207 207 TRP TRP H . n
B 2 220 TYR 220 208 208 TYR TYR H . n
B 2 221 GLN 221 209 209 GLN GLN H . n
B 2 222 MET 222 210 210 MET MET H . n
B 2 223 GLY 223 211 211 GLY GLY H . n
B 2 224 ILE 224 212 212 ILE ILE H . n
B 2 225 VAL 225 213 213 VAL VAL H . n
B 2 226 SER 226 214 214 SER SER H . n
B 2 227 TRP 227 215 215 TRP TRP H . n
B 2 228 GLY 228 216 216 GLY GLY H . n
B 2 229 GLU 229 217 217 GLU GLU H . n
B 2 230 GLY 230 219 219 GLY GLY H . n
B 2 231 CYS 231 220 220 CYS CYS H . n
B 2 232 ASP 232 221 221 ASP ASP H A n
B 2 233 ARG 233 221 221 ARG ARG H . n
B 2 234 ASP 234 222 222 ASP ASP H . n
B 2 235 GLY 235 223 223 GLY GLY H . n
B 2 236 LYS 236 224 224 LYS LYS H . n
B 2 237 TYR 237 225 225 TYR TYR H . n
B 2 238 GLY 238 226 226 GLY GLY H . n
B 2 239 PHE 239 227 227 PHE PHE H . n
B 2 240 TYR 240 228 228 TYR TYR H . n
B 2 241 THR 241 229 229 THR THR H . n
B 2 242 HIS 242 230 230 HIS HIS H . n
B 2 243 VAL 243 231 231 VAL VAL H . n
B 2 244 PHE 244 232 232 PHE PHE H . n
B 2 245 ARG 245 233 233 ARG ARG H . n
B 2 246 LEU 246 234 234 LEU LEU H . n
B 2 247 LYS 247 235 235 LYS LYS H . n
B 2 248 LYS 248 236 236 LYS LYS H . n
B 2 249 TRP 249 237 237 TRP TRP H . n
B 2 250 ILE 250 238 238 ILE ILE H . n
B 2 251 GLN 251 239 239 GLN GLN H . n
B 2 252 LYS 252 240 240 LYS LYS H . n
B 2 253 VAL 253 241 241 VAL VAL H . n
B 2 254 ILE 254 242 242 ILE ILE H . n
B 2 255 ASP 255 243 243 ASP ASP H . n
B 2 256 GLN 256 244 244 GLN GLN H . n
B 2 257 PHE 257 245 245 PHE PHE H . n
B 2 258 GLY 258 246 246 GLY GLY H . n
C 3 1 G 1 1 1 G G B . n
C 3 2 G 2 2 2 G G B . n
C 3 3 G 3 3 3 G G B . n
C 3 4 A 4 4 4 A A B . n
C 3 5 A 5 5 5 A A B . n
C 3 6 CFL 6 6 6 CFL CFL B . n
C 3 7 A 7 7 7 A A B . n
C 3 8 A 8 8 8 A A B . n
C 3 9 A 9 9 9 A A B . n
C 3 10 G 10 10 10 G G B . n
C 3 11 CFL 11 11 11 CFL CFL B . n
C 3 12 UFT 12 12 12 UFT UFT B . n
C 3 13 G 13 13 13 G G B . n
C 3 14 A 14 14 14 A A B . n
C 3 15 A 15 15 15 A A B . n
C 3 16 G 16 16 16 G G B . n
C 3 17 UFT 17 17 17 UFT UFT B . n
C 3 18 A 18 18 18 A A B . n
C 3 19 CFL 19 19 19 CFL CFL B . n
C 3 20 UFT 20 20 20 UFT UFT B . n
C 3 21 UFT 21 21 21 UFT UFT B . n
C 3 22 A 22 22 22 A A B . n
C 3 23 CFL 23 23 23 CFL CFL B . n
C 3 24 CFL 24 24 24 CFL CFL B . n
C 3 25 CFL 25 25 25 CFL CFL B . n
C 3 26 DT 26 26 26 DT T B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 PEG 1 305 305 PEG PEG L .
E 5 0G6 1 1 1 0G6 0G6 H .
F 6 MG 1 1002 1002 MG MG H .
G 7 P6G 1 1003 1003 P6G P6G H .
H 8 ACY 1 1004 1004 ACY ACY H .
I 8 ACY 1 1005 1005 ACY ACY H .
J 8 ACY 1 1006 1006 ACY ACY H .
K 8 ACY 1 1007 1007 ACY ACY H .
L 6 MG 1 1000 1000 MG MG B .
M 8 ACY 1 151 151 ACY ACY B .
N 8 ACY 1 152 152 ACY ACY B .
O 4 PEG 1 103 103 PEG PEG B .
P 4 PEG 1 104 104 PEG PEG B .
Q 9 HOH 1 39 39 HOH HOH L .
Q 9 HOH 2 41 41 HOH HOH L .
Q 9 HOH 3 61 61 HOH HOH L .
Q 9 HOH 4 63 63 HOH HOH L .
Q 9 HOH 5 76 76 HOH HOH L .
Q 9 HOH 6 124 124 HOH HOH L .
Q 9 HOH 7 133 133 HOH HOH L .
Q 9 HOH 8 142 142 HOH HOH L .
Q 9 HOH 9 146 146 HOH HOH L .
Q 9 HOH 10 179 179 HOH HOH L .
Q 9 HOH 11 187 187 HOH HOH L .
Q 9 HOH 12 199 199 HOH HOH L .
Q 9 HOH 13 209 209 HOH HOH L .
Q 9 HOH 14 211 211 HOH HOH L .
Q 9 HOH 15 224 224 HOH HOH L .
Q 9 HOH 16 226 226 HOH HOH L .
Q 9 HOH 17 242 242 HOH HOH L .
Q 9 HOH 18 255 255 HOH HOH L .
Q 9 HOH 19 281 281 HOH HOH L .
Q 9 HOH 20 284 284 HOH HOH L .
Q 9 HOH 21 303 303 HOH HOH L .
Q 9 HOH 22 363 363 HOH HOH L .
Q 9 HOH 23 375 375 HOH HOH L .
R 9 HOH 1 247 247 HOH HOH H .
R 9 HOH 2 248 248 HOH HOH H .
R 9 HOH 3 249 249 HOH HOH H .
R 9 HOH 4 250 250 HOH HOH H .
R 9 HOH 5 1008 1008 HOH HOH H .
R 9 HOH 6 1009 1009 HOH HOH H .
R 9 HOH 7 1010 1010 HOH HOH H .
R 9 HOH 8 1011 1011 HOH HOH H .
R 9 HOH 9 1012 1012 HOH HOH H .
R 9 HOH 10 1013 1013 HOH HOH H .
R 9 HOH 11 1014 1014 HOH HOH H .
R 9 HOH 12 1015 1015 HOH HOH H .
R 9 HOH 13 1016 1016 HOH HOH H .
R 9 HOH 14 1017 1017 HOH HOH H .
R 9 HOH 15 1018 1018 HOH HOH H .
R 9 HOH 16 1019 1019 HOH HOH H .
R 9 HOH 17 1020 1020 HOH HOH H .
R 9 HOH 18 1021 1021 HOH HOH H .
R 9 HOH 19 1022 1022 HOH HOH H .
R 9 HOH 20 1023 1023 HOH HOH H .
R 9 HOH 21 1024 1024 HOH HOH H .
R 9 HOH 22 1025 1025 HOH HOH H .
R 9 HOH 23 1026 1026 HOH HOH H .
R 9 HOH 24 1027 1027 HOH HOH H .
R 9 HOH 25 1028 1028 HOH HOH H .
R 9 HOH 26 1029 1029 HOH HOH H .
R 9 HOH 27 1030 1030 HOH HOH H .
R 9 HOH 28 1031 1031 HOH HOH H .
R 9 HOH 29 1032 1032 HOH HOH H .
R 9 HOH 30 1033 1033 HOH HOH H .
R 9 HOH 31 1034 1034 HOH HOH H .
R 9 HOH 32 1035 1035 HOH HOH H .
R 9 HOH 33 1036 1036 HOH HOH H .
R 9 HOH 34 1037 1037 HOH HOH H .
R 9 HOH 35 1038 1038 HOH HOH H .
R 9 HOH 36 1039 1039 HOH HOH H .
R 9 HOH 37 1040 1040 HOH HOH H .
R 9 HOH 38 1041 1041 HOH HOH H .
R 9 HOH 39 1042 1042 HOH HOH H .
R 9 HOH 40 1043 1043 HOH HOH H .
R 9 HOH 41 1044 1044 HOH HOH H .
R 9 HOH 42 1045 1045 HOH HOH H .
R 9 HOH 43 1046 1046 HOH HOH H .
R 9 HOH 44 1047 1047 HOH HOH H .
R 9 HOH 45 1048 1048 HOH HOH H .
R 9 HOH 46 1049 1049 HOH HOH H .
R 9 HOH 47 1050 1050 HOH HOH H .
R 9 HOH 48 1051 1051 HOH HOH H .
R 9 HOH 49 1052 1052 HOH HOH H .
R 9 HOH 50 1053 1053 HOH HOH H .
R 9 HOH 51 1054 1054 HOH HOH H .
R 9 HOH 52 1055 1055 HOH HOH H .
R 9 HOH 53 1056 1056 HOH HOH H .
R 9 HOH 54 1057 1057 HOH HOH H .
R 9 HOH 55 1058 1058 HOH HOH H .
R 9 HOH 56 1059 1059 HOH HOH H .
R 9 HOH 57 1060 1060 HOH HOH H .
R 9 HOH 58 1061 1061 HOH HOH H .
R 9 HOH 59 1062 1062 HOH HOH H .
R 9 HOH 60 1063 1063 HOH HOH H .
R 9 HOH 61 1064 1064 HOH HOH H .
R 9 HOH 62 1065 1065 HOH HOH H .
R 9 HOH 63 1066 1066 HOH HOH H .
R 9 HOH 64 1067 1067 HOH HOH H .
R 9 HOH 65 1068 1068 HOH HOH H .
R 9 HOH 66 1069 1069 HOH HOH H .
R 9 HOH 67 1070 1070 HOH HOH H .
R 9 HOH 68 1071 1071 HOH HOH H .
R 9 HOH 69 1072 1072 HOH HOH H .
R 9 HOH 70 1073 1073 HOH HOH H .
R 9 HOH 71 1074 1074 HOH HOH H .
R 9 HOH 72 1075 1075 HOH HOH H .
R 9 HOH 73 1076 1076 HOH HOH H .
R 9 HOH 74 1077 1077 HOH HOH H .
R 9 HOH 75 1078 1078 HOH HOH H .
R 9 HOH 76 1079 1079 HOH HOH H .
R 9 HOH 77 1080 1080 HOH HOH H .
R 9 HOH 78 1081 1081 HOH HOH H .
R 9 HOH 79 1082 1082 HOH HOH H .
R 9 HOH 80 1083 1083 HOH HOH H .
R 9 HOH 81 1084 1084 HOH HOH H .
R 9 HOH 82 1085 1085 HOH HOH H .
R 9 HOH 83 1086 1086 HOH HOH H .
R 9 HOH 84 1087 1087 HOH HOH H .
R 9 HOH 85 1088 1088 HOH HOH H .
R 9 HOH 86 1089 1089 HOH HOH H .
R 9 HOH 87 1090 1090 HOH HOH H .
R 9 HOH 88 1091 1091 HOH HOH H .
R 9 HOH 89 1092 1092 HOH HOH H .
R 9 HOH 90 1093 1093 HOH HOH H .
R 9 HOH 91 1094 1094 HOH HOH H .
R 9 HOH 92 1095 1095 HOH HOH H .
R 9 HOH 93 1096 1096 HOH HOH H .
R 9 HOH 94 1097 1097 HOH HOH H .
R 9 HOH 95 1098 1098 HOH HOH H .
R 9 HOH 96 1099 1099 HOH HOH H .
R 9 HOH 97 1100 1100 HOH HOH H .
R 9 HOH 98 1101 1101 HOH HOH H .
R 9 HOH 99 1102 1102 HOH HOH H .
R 9 HOH 100 1103 1103 HOH HOH H .
R 9 HOH 101 1104 1104 HOH HOH H .
R 9 HOH 102 1105 1105 HOH HOH H .
R 9 HOH 103 1106 1106 HOH HOH H .
R 9 HOH 104 1107 1107 HOH HOH H .
R 9 HOH 105 1108 1108 HOH HOH H .
R 9 HOH 106 1109 1109 HOH HOH H .
R 9 HOH 107 1110 1110 HOH HOH H .
R 9 HOH 108 1111 1111 HOH HOH H .
R 9 HOH 109 1112 1112 HOH HOH H .
R 9 HOH 110 1113 1113 HOH HOH H .
R 9 HOH 111 1114 1114 HOH HOH H .
R 9 HOH 112 1115 1115 HOH HOH H .
R 9 HOH 113 1116 1116 HOH HOH H .
R 9 HOH 114 1117 1117 HOH HOH H .
R 9 HOH 115 1118 1118 HOH HOH H .
R 9 HOH 116 1119 1119 HOH HOH H .
R 9 HOH 117 1120 1120 HOH HOH H .
R 9 HOH 118 1121 1121 HOH HOH H .
R 9 HOH 119 1122 1122 HOH HOH H .
R 9 HOH 120 1123 1123 HOH HOH H .
R 9 HOH 121 1124 1124 HOH HOH H .
R 9 HOH 122 1125 1125 HOH HOH H .
R 9 HOH 123 1126 1126 HOH HOH H .
R 9 HOH 124 1127 1127 HOH HOH H .
R 9 HOH 125 1128 1128 HOH HOH H .
R 9 HOH 126 1129 1129 HOH HOH H .
R 9 HOH 127 1130 1130 HOH HOH H .
R 9 HOH 128 1131 1131 HOH HOH H .
R 9 HOH 129 1132 1132 HOH HOH H .
R 9 HOH 130 1133 1133 HOH HOH H .
R 9 HOH 131 1134 1134 HOH HOH H .
R 9 HOH 132 1135 1135 HOH HOH H .
R 9 HOH 133 1136 1136 HOH HOH H .
R 9 HOH 134 1137 1137 HOH HOH H .
R 9 HOH 135 1138 1138 HOH HOH H .
R 9 HOH 136 1139 1139 HOH HOH H .
R 9 HOH 137 1140 1140 HOH HOH H .
R 9 HOH 138 1141 1141 HOH HOH H .
R 9 HOH 139 1142 1142 HOH HOH H .
R 9 HOH 140 1143 1143 HOH HOH H .
R 9 HOH 141 1144 1144 HOH HOH H .
R 9 HOH 142 1145 1145 HOH HOH H .
R 9 HOH 143 1146 1146 HOH HOH H .
R 9 HOH 144 1147 1147 HOH HOH H .
R 9 HOH 145 1148 1148 HOH HOH H .
R 9 HOH 146 1149 1149 HOH HOH H .
R 9 HOH 147 1150 1150 HOH HOH H .
R 9 HOH 148 1151 1151 HOH HOH H .
R 9 HOH 149 1152 1152 HOH HOH H .
R 9 HOH 150 1153 1153 HOH HOH H .
R 9 HOH 151 1154 1154 HOH HOH H .
R 9 HOH 152 1155 1155 HOH HOH H .
R 9 HOH 153 1156 1156 HOH HOH H .
R 9 HOH 154 1157 1157 HOH HOH H .
R 9 HOH 155 1158 1158 HOH HOH H .
R 9 HOH 156 1159 1159 HOH HOH H .
R 9 HOH 157 1160 1160 HOH HOH H .
R 9 HOH 158 1161 1161 HOH HOH H .
R 9 HOH 159 1162 1162 HOH HOH H .
R 9 HOH 160 1163 1163 HOH HOH H .
R 9 HOH 161 1164 1164 HOH HOH H .
R 9 HOH 162 1165 1165 HOH HOH H .
R 9 HOH 163 1166 1166 HOH HOH H .
R 9 HOH 164 1167 1167 HOH HOH H .
R 9 HOH 165 1168 1168 HOH HOH H .
R 9 HOH 166 1169 1169 HOH HOH H .
R 9 HOH 167 1170 1170 HOH HOH H .
R 9 HOH 168 1171 1171 HOH HOH H .
R 9 HOH 169 1172 1172 HOH HOH H .
R 9 HOH 170 1173 1173 HOH HOH H .
R 9 HOH 171 1174 1174 HOH HOH H .
R 9 HOH 172 1175 1175 HOH HOH H .
R 9 HOH 173 1176 1176 HOH HOH H .
R 9 HOH 174 1177 1177 HOH HOH H .
R 9 HOH 175 1178 1178 HOH HOH H .
R 9 HOH 176 1179 1179 HOH HOH H .
R 9 HOH 177 1180 1180 HOH HOH H .
R 9 HOH 178 1181 1181 HOH HOH H .
R 9 HOH 179 1182 1182 HOH HOH H .
R 9 HOH 180 1183 1183 HOH HOH H .
R 9 HOH 181 1184 1184 HOH HOH H .
R 9 HOH 182 1185 1185 HOH HOH H .
R 9 HOH 183 1186 1186 HOH HOH H .
R 9 HOH 184 1187 1187 HOH HOH H .
R 9 HOH 185 1188 1188 HOH HOH H .
R 9 HOH 186 1189 1189 HOH HOH H .
S 9 HOH 1 1001 1001 HOH HOH B .
S 9 HOH 2 1002 1002 HOH HOH B .
S 9 HOH 3 1003 1003 HOH HOH B .
S 9 HOH 4 1004 1004 HOH HOH B .
S 9 HOH 5 1005 1005 HOH HOH B .
S 9 HOH 6 1006 1006 HOH HOH B .
S 9 HOH 7 1007 1007 HOH HOH B .
S 9 HOH 8 1008 1008 HOH HOH B .
S 9 HOH 9 1009 1009 HOH HOH B .
S 9 HOH 10 1010 1010 HOH HOH B .
S 9 HOH 11 1011 1011 HOH HOH B .
S 9 HOH 12 1012 1012 HOH HOH B .
S 9 HOH 13 1013 1013 HOH HOH B .
S 9 HOH 14 1014 1014 HOH HOH B .
S 9 HOH 15 1015 1015 HOH HOH B .
S 9 HOH 16 1016 1016 HOH HOH B .
S 9 HOH 17 1017 1017 HOH HOH B .
S 9 HOH 18 1018 1018 HOH HOH B .
S 9 HOH 19 1019 1019 HOH HOH B .
S 9 HOH 20 1020 1020 HOH HOH B .
S 9 HOH 21 1021 1021 HOH HOH B .
S 9 HOH 22 1022 1022 HOH HOH B .
S 9 HOH 23 1023 1023 HOH HOH B .
S 9 HOH 24 1024 1024 HOH HOH B .
S 9 HOH 25 1025 1025 HOH HOH B .
S 9 HOH 26 1026 1026 HOH HOH B .
S 9 HOH 27 1027 1027 HOH HOH B .
S 9 HOH 28 1028 1028 HOH HOH B .
S 9 HOH 29 1029 1029 HOH HOH B .
S 9 HOH 30 1030 1030 HOH HOH B .
S 9 HOH 31 1031 1031 HOH HOH B .
S 9 HOH 32 1032 1032 HOH HOH B .
S 9 HOH 33 1033 1033 HOH HOH B .
S 9 HOH 34 1034 1034 HOH HOH B .
S 9 HOH 35 1035 1035 HOH HOH B .
S 9 HOH 36 1036 1036 HOH HOH B .
S 9 HOH 37 1037 1037 HOH HOH B .
S 9 HOH 38 1038 1038 HOH HOH B .
S 9 HOH 39 1039 1039 HOH HOH B .
S 9 HOH 40 1040 1040 HOH HOH B .
S 9 HOH 41 1041 1041 HOH HOH B .
S 9 HOH 42 1042 1042 HOH HOH B .
S 9 HOH 43 1043 1043 HOH HOH B .
S 9 HOH 44 1044 1044 HOH HOH B .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 B DT 26 ? "C5'" ? C DT 26 "C5'"
2 1 Y 1 B DT 26 ? "C4'" ? C DT 26 "C4'"
3 1 Y 1 B DT 26 ? "O4'" ? C DT 26 "O4'"
4 1 Y 1 B DT 26 ? "C3'" ? C DT 26 "C3'"
5 1 Y 1 B DT 26 ? "O3'" ? C DT 26 "O3'"
6 1 Y 1 B DT 26 ? "C2'" ? C DT 26 "C2'"
7 1 Y 1 B DT 26 ? "C1'" ? C DT 26 "C1'"
8 1 Y 1 B DT 26 ? N1 ? C DT 26 N1
9 1 Y 1 B DT 26 ? C2 ? C DT 26 C2
10 1 Y 1 B DT 26 ? O2 ? C DT 26 O2
11 1 Y 1 B DT 26 ? N3 ? C DT 26 N3
12 1 Y 1 B DT 26 ? C4 ? C DT 26 C4
13 1 Y 1 B DT 26 ? O4 ? C DT 26 O4
14 1 Y 1 B DT 26 ? C5 ? C DT 26 C5
15 1 Y 1 B DT 26 ? C7 ? C DT 26 C7
16 1 Y 1 B DT 26 ? C6 ? C DT 26 C6
#
loop_
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
_software.pdbx_ordinal
CNS 1.1 ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement
http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 1
PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction'
http://pdb.rutgers.edu/software/ C++ ? 2
DENZO . ? ? ? ? 'data reduction' ? ? ? 3
SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 4
CNS . ? ? ? ? phasing ? ? ? 5
#
_cell.entry_id 3DD2
_cell.length_a 83.766
_cell.length_b 134.017
_cell.length_c 44.033
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 4
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3DD2
_symmetry.space_group_name_H-M 'P 21 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 18
_symmetry.space_group_name_Hall ?
#
_exptl.crystals_number 1
_exptl.entry_id 3DD2
_exptl.method 'X-RAY DIFFRACTION'
#
_exptl_crystal.id 1
_exptl_crystal.density_Matthews 2.98
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 58.68
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.pH 6.5
_exptl_crystal_grow.temp 290
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_details
'PEG 8000, Magnesium Acetate, Sodium Cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 290K'
_exptl_crystal_grow.pdbx_pH_range .
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.details
1 1 1 'PEG 8000' ? ? ?
1 2 1 'Magnesium Acetate' ? ? ?
1 3 1 'Sodium Cacodylate' ? ? ?
1 4 2 'PEG 8000' ? ? ?
1 5 2 'Magnesium Acetate' ? ? ?
1 6 2 'Sodium Cacodylate' ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 98
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IV'
_diffrn_detector.pdbx_collection_date 2002-04-12
_diffrn_detector.details 'Yale mirrors'
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.monochromator 'Yale Mirrors'
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.54
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RUH3R'
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.54
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
#
_reflns.entry_id 3DD2
_reflns.B_iso_Wilson_estimate 14.900
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I -3
_reflns.d_resolution_high 1.9
_reflns.d_resolution_low 50
_reflns.number_all ?
_reflns.number_obs 37211
_reflns.percent_possible_obs 93.2
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value .054
_reflns.pdbx_netI_over_sigmaI ?
_reflns.pdbx_redundancy ?
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 1.90
_reflns_shell.d_res_low 1.97
_reflns_shell.percent_possible_obs ?
_reflns_shell.percent_possible_all 70
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_Rsym_value .354
_reflns_shell.pdbx_redundancy ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 3DD2
_refine.ls_d_res_high 1.900
_refine.ls_d_res_low 30.350
_refine.pdbx_ls_sigma_F 0
_refine.pdbx_data_cutoff_high_absF 1922052.125
_refine.pdbx_data_cutoff_low_absF 0.000
_refine.ls_percent_reflns_obs 89.000
_refine.ls_number_reflns_obs 35581
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_R_Free_selection_details RANDOM
_refine.ls_R_factor_R_work 0.204
_refine.ls_R_factor_R_free 0.254
_refine.ls_percent_reflns_R_free 5.000
_refine.ls_number_reflns_R_free 1764
_refine.ls_R_factor_R_free_error 0.006
_refine.B_iso_mean 38.600
_refine.solvent_model_param_bsol 55.417
_refine.solvent_model_param_ksol 0.348
_refine.pdbx_isotropic_thermal_model RESTRAINED
_refine.aniso_B[1][1] -13.010
_refine.aniso_B[2][2] 23.880
_refine.aniso_B[3][3] -10.870
_refine.aniso_B[1][2] 0.000
_refine.aniso_B[1][3] 0.000
_refine.aniso_B[2][3] 0.000
_refine.solvent_model_details 'FLAT MODEL'
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_ls_sigma_I ?
_refine.ls_number_reflns_all ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_starting_model 'PDB ENTRY 1PPB'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.details ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_overall_ESU_R ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 3DD2
_refine_analyze.Luzzati_coordinate_error_obs 0.260
_refine_analyze.Luzzati_sigma_a_obs 0.420
_refine_analyze.Luzzati_d_res_low_obs 5.000
_refine_analyze.Luzzati_coordinate_error_free 0.320
_refine_analyze.Luzzati_sigma_a_free 0.390
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 2328
_refine_hist.pdbx_number_atoms_nucleic_acid 537
_refine_hist.pdbx_number_atoms_ligand 96
_refine_hist.number_atoms_solvent 253
_refine_hist.number_atoms_total 3214
_refine_hist.d_res_high 1.900
_refine_hist.d_res_low 30.350
#
loop_
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
c_bond_d ? 0.011 ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg ? 1.400 ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d ? 27.100 ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d ? 1.150 ? ? 'X-RAY DIFFRACTION' ?
c_mcbond_it ? 1.430 1.500 ? 'X-RAY DIFFRACTION' ?
c_mcangle_it ? 2.210 2.000 ? 'X-RAY DIFFRACTION' ?
c_scbond_it ? 2.060 2.000 ? 'X-RAY DIFFRACTION' ?
c_scangle_it ? 3.020 2.500 ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.d_res_high 1.900
_refine_ls_shell.d_res_low 2.020
_refine_ls_shell.pdbx_total_number_of_bins_used 6
_refine_ls_shell.percent_reflns_obs 63.900
_refine_ls_shell.number_reflns_R_work 4006
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_R_work 0.330
_refine_ls_shell.R_factor_R_free 0.368
_refine_ls_shell.percent_reflns_R_free 4.300
_refine_ls_shell.number_reflns_R_free 180
_refine_ls_shell.R_factor_R_free_error 0.027
_refine_ls_shell.number_reflns_all 4186
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
loop_
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
_pdbx_xplor_file.pdbx_refine_id
1 protein_rep.param protein.top 'X-RAY DIFFRACTION'
2 dna-rna-multi-endo.param dna-rna-multi-endo.top 'X-RAY DIFFRACTION'
3 water_rep.param water.top 'X-RAY DIFFRACTION'
4 PPACK_patches.par ion.top 'X-RAY DIFFRACTION'
5 ion.param PPACK_patches.top 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 3DD2
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.000000
_database_PDB_matrix.origx_vector[2] 0.000000
_database_PDB_matrix.origx_vector[3] 0.000000
#
_struct.entry_id 3DD2
_struct.title 'Crystal structure of an RNA aptamer bound to human thrombin'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3DD2
_struct_keywords.pdbx_keywords 'Hydrolase/HYDROLASE INHIBITOR/RNA'
_struct_keywords.text
'thrombin, aptamer, RNA, DNA, heparin, exosite, Protease, Serine protease, Hydrolase-Hydrolase inhibitor-RNA COMPLEX'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 5 ?
F N N 6 ?
G N N 7 ?
H N N 8 ?
I N N 8 ?
J N N 8 ?
K N N 8 ?
L N N 6 ?
M N N 8 ?
N N N 8 ?
O N N 4 ?
P N N 4 ?
Q N N 9 ?
R N N 9 ?
S N N 9 ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_isoform
1 UNP THRB_HUMAN P00734 1 GEADCGLRPLFEKKSLEDKTERELLESYID 332 ?
2 UNP THRB_HUMAN P00734 2
;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM
LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL
QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY
THVFRLKKWIQKVIDQFG
;
364 ?
3 PDB 3DD2 3DD2 3 GGGAACFLAAAGCFLUFTGAAGUFTACFLUFTUFTACFLCFLCFLT ? ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 3DD2 L 1 D 30 L P00734 332 ? 361 ? 1 14
2 2 3DD2 H 1 ? 258 ? P00734 364 ? 621 ? 16 246
3 3 3DD2 B 1 ? 26 ? 3DD2 1 ? 26 ? 1 26
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details trimeric
_pdbx_struct_assembly.oligomeric_count 3
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 PHE A 11 ? SER A 15 ? PHE L 7 SER L 11 5 ? 5
HELX_P HELX_P2 2 THR A 20 B ASP A 30 L THR L 14 ASP L 14 1 ? 11
HELX_P HELX_P3 3 ALA B 41 ? LEU B 45 ? ALA H 55 LEU H 59 1 ? 5
HELX_P HELX_P4 4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4
HELX_P HELX_P5 5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3
HELX_P HELX_P6 6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9
HELX_P HELX_P7 7 THR B 149 ? GLY B 153 D THR H 149 GLY H 149 5 ? 5
HELX_P HELX_P8 8 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8
HELX_P HELX_P9 9 LYS B 191 ? GLY B 195 C LYS H 185 GLY H 186 5 ? 5
HELX_P HELX_P10 10 LEU B 246 ? GLY B 258 ? LEU H 234 GLY H 246 1 ? 13
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.032
? ?
disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.049
? ?
disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.042
? ?
disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.039
? ?
covale1 covale one ? E 0G6 . C3 ? ? ? 1_555 B HIS 43 NE2 ? ? H 0G6 1 H HIS 57 1_555 ? ? ? ? ? ? ? 1.485
? ?
covale2 covale none ? E 0G6 . C2 ? ? ? 1_555 B SER 205 OG ? ? H 0G6 1 H SER 195 1_555 ? ? ? ? ? ? ? 1.425
? ?
covale3 covale both ? C A 5 "O3'" ? ? ? 1_555 C CFL 6 P ? ? B A 5 B CFL 6 1_555 ? ? ? ? ? ? ? 1.610
? ?
covale4 covale one ? C CFL 6 "O3'" ? ? ? 1_555 C A 7 P ? ? B CFL 6 B A 7 1_555 ? ? ? ? ? ? ? 1.620
? ?
covale5 covale both ? C G 10 "O3'" ? ? ? 1_555 C CFL 11 P ? ? B G 10 B CFL 11 1_555 ? ? ? ? ? ? ? 1.599
? ?
covale6 covale one ? C CFL 11 "O3'" ? ? ? 1_555 C UFT 12 P ? ? B CFL 11 B UFT 12 1_555 ? ? ? ? ? ? ? 1.606
? ?
covale7 covale both ? C UFT 12 "O3'" ? ? ? 1_555 C G 13 P ? ? B UFT 12 B G 13 1_555 ? ? ? ? ? ? ? 1.604
? ?
covale8 covale both ? C G 16 "O3'" ? ? ? 1_555 C UFT 17 P ? ? B G 16 B UFT 17 1_555 ? ? ? ? ? ? ? 1.607
? ?
covale9 covale both ? C UFT 17 "O3'" ? ? ? 1_555 C A 18 P ? ? B UFT 17 B A 18 1_555 ? ? ? ? ? ? ? 1.617
? ?
covale10 covale both ? C A 18 "O3'" ? ? ? 1_555 C CFL 19 P ? ? B A 18 B CFL 19 1_555 ? ? ? ? ? ? ? 1.607
? ?
covale11 covale one ? C CFL 19 "O3'" ? ? ? 1_555 C UFT 20 P ? ? B CFL 19 B UFT 20 1_555 ? ? ? ? ? ? ? 1.610
? ?
covale12 covale both ? C UFT 20 "O3'" ? ? ? 1_555 C UFT 21 P ? ? B UFT 20 B UFT 21 1_555 ? ? ? ? ? ? ? 1.611
? ?
covale13 covale both ? C UFT 21 "O3'" ? ? ? 1_555 C A 22 P ? ? B UFT 21 B A 22 1_555 ? ? ? ? ? ? ? 1.603
? ?
covale14 covale both ? C A 22 "O3'" ? ? ? 1_555 C CFL 23 P ? ? B A 22 B CFL 23 1_555 ? ? ? ? ? ? ? 1.609
? ?
covale15 covale one ? C CFL 23 "O3'" ? ? ? 1_555 C CFL 24 P ? ? B CFL 23 B CFL 24 1_555 ? ? ? ? ? ? ? 1.610
? ?
covale16 covale one ? C CFL 24 "O3'" ? ? ? 1_555 C CFL 25 P ? ? B CFL 24 B CFL 25 1_555 ? ? ? ? ? ? ? 1.610
? ?
covale17 covale one ? C CFL 25 "O3'" ? ? ? 1_555 C DT 26 P ? ? B CFL 25 B DT 26 1_555 ? ? ? ? ? ? ? 1.621
? ?
metalc1 metalc ? ? B ARG 233 O ? ? ? 1_555 F MG . MG ? ? H ARG 221 H MG 1002 1_555 ? ? ? ? ? ? ? 2.403
? ?
metalc2 metalc ? ? B LYS 236 O ? ? ? 1_555 F MG . MG ? ? H LYS 224 H MG 1002 1_555 ? ? ? ? ? ? ? 2.445
? ?
metalc3 metalc ? ? F MG . MG ? ? ? 1_555 R HOH . O ? ? H MG 1002 H HOH 1012 1_555 ? ? ? ? ? ? ? 2.263
? ?
metalc4 metalc ? ? F MG . MG ? ? ? 1_555 R HOH . O ? ? H MG 1002 H HOH 1037 1_555 ? ? ? ? ? ? ? 2.297
? ?
metalc5 metalc ? ? C A 8 OP2 ? ? ? 1_555 L MG . MG ? ? B A 8 B MG 1000 1_555 ? ? ? ? ? ? ? 2.059
? ?
metalc6 metalc ? ? C A 9 OP2 ? ? ? 1_555 L MG . MG ? ? B A 9 B MG 1000 1_555 ? ? ? ? ? ? ? 2.053
? ?
metalc7 metalc ? ? L MG . MG ? ? ? 1_555 S HOH . O ? ? B MG 1000 B HOH 1003 1_555 ? ? ? ? ? ? ? 2.014
? ?
metalc8 metalc ? ? L MG . MG ? ? ? 1_555 S HOH . O ? ? B MG 1000 B HOH 1006 1_555 ? ? ? ? ? ? ? 2.301
? ?
metalc9 metalc ? ? L MG . MG ? ? ? 1_555 S HOH . O ? ? B MG 1000 B HOH 1009 1_555 ? ? ? ? ? ? ? 2.123
? ?
metalc10 metalc ? ? L MG . MG ? ? ? 1_555 S HOH . O ? ? B MG 1000 B HOH 1018 1_555 ? ? ? ? ? ? ? 2.271
? ?
hydrog1 hydrog ? ? C G 1 N1 ? ? ? 1_555 C CFL 25 N3 ? ? B G 1 B CFL 25 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog2 hydrog ? ? C G 1 N2 ? ? ? 1_555 C CFL 25 O2 ? ? B G 1 B CFL 25 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog3 hydrog ? ? C G 1 O6 ? ? ? 1_555 C CFL 25 N4 ? ? B G 1 B CFL 25 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog4 hydrog ? ? C G 2 N1 ? ? ? 1_555 C CFL 24 N3 ? ? B G 2 B CFL 24 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog5 hydrog ? ? C G 2 N2 ? ? ? 1_555 C CFL 24 O2 ? ? B G 2 B CFL 24 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog6 hydrog ? ? C G 2 O6 ? ? ? 1_555 C CFL 24 N4 ? ? B G 2 B CFL 24 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog7 hydrog ? ? C G 3 N1 ? ? ? 1_555 C CFL 23 N3 ? ? B G 3 B CFL 23 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog8 hydrog ? ? C G 3 N2 ? ? ? 1_555 C CFL 23 O2 ? ? B G 3 B CFL 23 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog9 hydrog ? ? C G 3 O6 ? ? ? 1_555 C CFL 23 N4 ? ? B G 3 B CFL 23 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog10 hydrog ? ? C A 5 N3 ? ? ? 1_555 C A 22 N6 ? ? B A 5 B A 22 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ?
? ?
hydrog11 hydrog ? ? C A 7 N1 ? ? ? 1_555 C CFL 19 N4 ? ? B A 7 B CFL 19 1_555 ? ? ? ? ? ? 'A-CFL MISPAIR' ?
? ?
hydrog12 hydrog ? ? C A 8 N6 ? ? ? 1_555 C A 18 N7 ? ? B A 8 B A 18 1_555 ? ? ? ? ? ? TYPE_2_PAIR ?
? ?
hydrog13 hydrog ? ? C A 8 N7 ? ? ? 1_555 C A 18 N6 ? ? B A 8 B A 18 1_555 ? ? ? ? ? ? TYPE_2_PAIR ?
? ?
hydrog14 hydrog ? ? C A 8 N1 ? ? ? 1_555 C UFT 21 N3 ? ? B A 8 B UFT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog15 hydrog ? ? C A 8 N6 ? ? ? 1_555 C UFT 21 O4 ? ? B A 8 B UFT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog16 hydrog ? ? C A 9 N1 ? ? ? 1_555 C UFT 20 N3 ? ? B A 9 B UFT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog17 hydrog ? ? C A 9 N6 ? ? ? 1_555 C UFT 20 O4 ? ? B A 9 B UFT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog18 hydrog ? ? C G 10 N1 ? ? ? 1_555 C CFL 19 N3 ? ? B G 10 B CFL 19 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog19 hydrog ? ? C G 10 N2 ? ? ? 1_555 C CFL 19 O2 ? ? B G 10 B CFL 19 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog20 hydrog ? ? C G 10 O6 ? ? ? 1_555 C CFL 19 N4 ? ? B G 10 B CFL 19 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog21 hydrog ? ? C CFL 11 N3 ? ? ? 1_555 C G 16 N1 ? ? B CFL 11 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog22 hydrog ? ? C CFL 11 N4 ? ? ? 1_555 C G 16 O6 ? ? B CFL 11 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog23 hydrog ? ? C CFL 11 O2 ? ? ? 1_555 C G 16 N2 ? ? B CFL 11 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog24 hydrog ? ? C UFT 12 N3 ? ? ? 1_555 C A 15 N3 ? ? B UFT 12 B A 15 1_555 ? ? ? ? ? ? 'UFT-A PAIR' ?
? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O ? B ARG 233 ? H ARG 221 ? 1_555 MG ? F MG . ? H MG 1002 ? 1_555 O ? B LYS 236 ? H LYS 224 ? 1_555 93.2 ?
2 O ? B ARG 233 ? H ARG 221 ? 1_555 MG ? F MG . ? H MG 1002 ? 1_555 O ? R HOH . ? H HOH 1012 ? 1_555 104.0 ?
3 O ? B LYS 236 ? H LYS 224 ? 1_555 MG ? F MG . ? H MG 1002 ? 1_555 O ? R HOH . ? H HOH 1012 ? 1_555 161.8 ?
4 O ? B ARG 233 ? H ARG 221 ? 1_555 MG ? F MG . ? H MG 1002 ? 1_555 O ? R HOH . ? H HOH 1037 ? 1_555 96.5 ?
5 O ? B LYS 236 ? H LYS 224 ? 1_555 MG ? F MG . ? H MG 1002 ? 1_555 O ? R HOH . ? H HOH 1037 ? 1_555 80.1 ?
6 O ? R HOH . ? H HOH 1012 ? 1_555 MG ? F MG . ? H MG 1002 ? 1_555 O ? R HOH . ? H HOH 1037 ? 1_555 103.3 ?
7 OP2 ? C A 8 ? B A 8 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 OP2 ? C A 9 ? B A 9 ? 1_555 85.6 ?
8 OP2 ? C A 8 ? B A 8 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1003 ? 1_555 94.6 ?
9 OP2 ? C A 9 ? B A 9 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1003 ? 1_555 172.4 ?
10 OP2 ? C A 8 ? B A 8 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1006 ? 1_555 176.0 ?
11 OP2 ? C A 9 ? B A 9 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1006 ? 1_555 91.0 ?
12 O ? S HOH . ? B HOH 1003 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1006 ? 1_555 89.0 ?
13 OP2 ? C A 8 ? B A 8 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1009 ? 1_555 95.8 ?
14 OP2 ? C A 9 ? B A 9 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1009 ? 1_555 86.1 ?
15 O ? S HOH . ? B HOH 1003 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1009 ? 1_555 86.3 ?
16 O ? S HOH . ? B HOH 1006 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1009 ? 1_555 86.0 ?
17 OP2 ? C A 8 ? B A 8 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1018 ? 1_555 94.3 ?
18 OP2 ? C A 9 ? B A 9 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1018 ? 1_555 93.0 ?
19 O ? S HOH . ? B HOH 1003 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1018 ? 1_555 94.5 ?
20 O ? S HOH . ? B HOH 1006 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1018 ? 1_555 83.8 ?
21 O ? S HOH . ? B HOH 1009 ? 1_555 MG ? L MG . ? B MG 1000 ? 1_555 O ? S HOH . ? B HOH 1018 ? 1_555 169.7 ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 0G6 E . ? HIS B 43 ? 0G6 H 1 ? 1_555 HIS H 57 ? 1_555 C3 NE2 HIS 2 0G6 None 'Covalent chemical modification'
2 0G6 E . ? SER B 205 ? 0G6 H 1 ? 1_555 SER H 195 ? 1_555 C2 OG SER 3 0G6 None 'Covalent chemical modification'
3 CYS A 5 ? CYS B 119 ? CYS L 1 ? 1_555 CYS H 122 ? 1_555 SG SG . . . None 'Disulfide bridge'
4 CYS B 28 ? CYS B 44 ? CYS H 42 ? 1_555 CYS H 58 ? 1_555 SG SG . . . None 'Disulfide bridge'
5 CYS B 173 ? CYS B 187 ? CYS H 168 ? 1_555 CYS H 182 ? 1_555 SG SG . . . None 'Disulfide bridge'
6 CYS B 201 ? CYS B 231 ? CYS H 191 ? 1_555 CYS H 220 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id SER
_struct_mon_prot_cis.label_seq_id 22
_struct_mon_prot_cis.label_asym_id B
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code A
_struct_mon_prot_cis.auth_comp_id SER
_struct_mon_prot_cis.auth_seq_id 36
_struct_mon_prot_cis.auth_asym_id H
_struct_mon_prot_cis.pdbx_label_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_label_seq_id_2 23
_struct_mon_prot_cis.pdbx_label_asym_id_2 B
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 ?
_struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_auth_seq_id_2 37
_struct_mon_prot_cis.pdbx_auth_asym_id_2 H
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle -0.23
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 7 ?
B ? 7 ?
C ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
A 4 5 ? anti-parallel
A 5 6 ? anti-parallel
A 6 7 ? anti-parallel
B 1 2 ? anti-parallel
B 2 3 ? anti-parallel
B 3 4 ? anti-parallel
B 4 5 ? anti-parallel
B 5 6 ? anti-parallel
B 6 7 ? anti-parallel
C 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21
A 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161
A 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140
A 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202
A 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215
A 6 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230
A 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183
B 1 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35
B 2 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46
B 3 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54
B 4 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108
B 5 LYS B 77 ? ILE B 86 ? LYS H 81 ILE H 90
B 6 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68
B 7 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35
C 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60
C 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157
A 2 3 O LEU B 165 ? O LEU H 160 N GLY B 136 ? N GLY H 136
A 3 4 N ARG B 137 ? N ARG H 137 O VAL B 210 ? O VAL H 200
A 4 5 N MET B 211 ? N MET H 201 O TYR B 220 ? O TYR H 208
A 5 6 N TRP B 227 ? N TRP H 215 O PHE B 239 ? O PHE H 227
A 6 7 O TYR B 240 ? O TYR H 228 N PHE B 186 ? N PHE H 181
B 1 2 N ARG B 20 ? N ARG H 35 O GLU B 25 ? O GLU H 39
B 2 3 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53
B 3 4 N VAL B 38 ? N VAL H 52 O MET B 103 ? O MET H 106
B 4 5 O LYS B 104 ? O LYS H 107 N GLU B 82 ? N GLU H 86
B 5 6 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68
B 6 7 O LEU B 60 ? O LEU H 65 N PHE B 19 ? N PHE H 34
C 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software L PEG 305 ? 7 'BINDING SITE FOR RESIDUE PEG L 305'
AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE MG B1000'
AC3 Software H 0G6 1 ? 17 'BINDING SITE FOR RESIDUE 0G6 H 1'
AC4 Software B ACY 151 ? 3 'BINDING SITE FOR RESIDUE ACY B 151'
AC5 Software B ACY 152 ? 3 'BINDING SITE FOR RESIDUE ACY B 152'
AC6 Software B PEG 103 ? 3 'BINDING SITE FOR RESIDUE PEG B 103'
AC7 Software B PEG 104 ? 6 'BINDING SITE FOR RESIDUE PEG B 104'
AC8 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MG H1002'
AC9 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE P6G H1003'
BC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE ACY H1004'
BC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE ACY H1005'
BC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE ACY H1006'
BC4 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE ACY H1007'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 7 A C 14 ? A B 14 . ? 1_555 ?
2 AC1 7 GLN B 131 ? GLN H 131 . ? 1_555 ?
3 AC1 7 ALA B 132 ? ALA H 132 . ? 1_555 ?
4 AC1 7 TYR B 134 ? TYR H 134 . ? 1_555 ?
5 AC1 7 ILE A 29 K ILE L 14 . ? 1_555 ?
6 AC1 7 ASP A 30 L ASP L 14 . ? 1_555 ?
7 AC1 7 HOH Q . ? HOH L 209 . ? 1_555 ?
8 AC2 7 A C 7 ? A B 7 . ? 1_555 ?
9 AC2 7 A C 8 ? A B 8 . ? 1_555 ?
10 AC2 7 A C 9 ? A B 9 . ? 1_555 ?
11 AC2 7 HOH S . ? HOH B 1003 . ? 1_555 ?
12 AC2 7 HOH S . ? HOH B 1006 . ? 1_555 ?
13 AC2 7 HOH S . ? HOH B 1009 . ? 1_555 ?
14 AC2 7 HOH S . ? HOH B 1018 . ? 1_555 ?
15 AC3 17 HIS B 43 ? HIS H 57 . ? 1_555 ?
16 AC3 17 TYR B 47 A TYR H 60 . ? 1_555 ?
17 AC3 17 LEU B 96 ? LEU H 99 . ? 1_555 ?
18 AC3 17 ASP B 199 ? ASP H 189 . ? 1_555 ?
19 AC3 17 ALA B 200 ? ALA H 190 . ? 1_555 ?
20 AC3 17 GLY B 203 ? GLY H 193 . ? 1_555 ?
21 AC3 17 SER B 205 ? SER H 195 . ? 1_555 ?
22 AC3 17 SER B 226 ? SER H 214 . ? 1_555 ?
23 AC3 17 TRP B 227 ? TRP H 215 . ? 1_555 ?
24 AC3 17 GLY B 228 ? GLY H 216 . ? 1_555 ?
25 AC3 17 GLY B 230 ? GLY H 219 . ? 1_555 ?
26 AC3 17 GLY B 238 ? GLY H 226 . ? 1_555 ?
27 AC3 17 HOH R . ? HOH H 247 . ? 1_555 ?
28 AC3 17 HOH R . ? HOH H 248 . ? 1_555 ?
29 AC3 17 HOH R . ? HOH H 249 . ? 1_555 ?
30 AC3 17 HOH R . ? HOH H 250 . ? 1_555 ?
31 AC3 17 HOH R . ? HOH H 1024 . ? 1_555 ?
32 AC4 3 A C 4 ? A B 4 . ? 1_555 ?
33 AC4 3 A C 5 ? A B 5 . ? 1_555 ?
34 AC4 3 CFL C 23 ? CFL B 23 . ? 1_555 ?
35 AC5 3 G C 2 ? G B 2 . ? 1_555 ?
36 AC5 3 G C 3 ? G B 3 . ? 1_555 ?
37 AC5 3 HOH S . ? HOH B 1017 . ? 1_555 ?
38 AC6 3 G C 3 ? G B 3 . ? 1_555 ?
39 AC6 3 CFL C 23 ? CFL B 23 . ? 1_555 ?
40 AC6 3 CFL C 24 ? CFL B 24 . ? 1_555 ?
41 AC7 6 CFL C 11 ? CFL B 11 . ? 1_555 ?
42 AC7 6 CFL C 19 ? CFL B 19 . ? 1_555 ?
43 AC7 6 UFT C 20 ? UFT B 20 . ? 1_555 ?
44 AC7 6 HOH S . ? HOH B 1021 . ? 1_555 ?
45 AC7 6 HOH S . ? HOH B 1044 . ? 1_555 ?
46 AC7 6 ALA B 150 A ALA H 149 . ? 4_443 ?
47 AC8 6 ARG B 233 ? ARG H 221 . ? 1_555 ?
48 AC8 6 LYS B 236 ? LYS H 224 . ? 1_555 ?
49 AC8 6 HOH R . ? HOH H 1012 . ? 1_555 ?
50 AC8 6 HOH R . ? HOH H 1032 . ? 1_555 ?
51 AC8 6 HOH R . ? HOH H 1037 . ? 1_555 ?
52 AC8 6 HOH R . ? HOH H 1047 . ? 1_555 ?
53 AC9 11 GLN B 24 ? GLN H 38 . ? 1_555 ?
54 AC9 11 LEU B 60 ? LEU H 65 . ? 1_555 ?
55 AC9 11 TYR B 71 ? TYR H 76 . ? 1_555 ?
56 AC9 11 ILE B 78 ? ILE H 82 . ? 1_555 ?
57 AC9 11 SER B 128 B SER H 129 . ? 4_544 ?
58 AC9 11 LEU B 129 C LEU H 129 . ? 4_544 ?
59 AC9 11 PRO B 214 ? PRO H 204 . ? 4_544 ?
60 AC9 11 PHE B 215 A PHE H 204 . ? 4_544 ?
61 AC9 11 HOH R . ? HOH H 1127 . ? 1_555 ?
62 AC9 11 HOH R . ? HOH H 1135 . ? 1_555 ?
63 AC9 11 HOH R . ? HOH H 1137 . ? 1_555 ?
64 BC1 2 ASN B 53 G ASN H 60 . ? 1_555 ?
65 BC1 2 ACY K . ? ACY H 1007 . ? 1_555 ?
66 BC2 2 GLY B 4 ? GLY H 19 . ? 1_555 ?
67 BC2 2 HOH R . ? HOH H 1153 . ? 1_555 ?
68 BC3 7 PHE B 111 ? PHE H 114 . ? 1_554 ?
69 BC3 7 PRO B 117 ? PRO H 120 . ? 1_554 ?
70 BC3 7 ARG B 178 ? ARG H 173 . ? 1_555 ?
71 BC3 7 HOH R . ? HOH H 1062 . ? 1_555 ?
72 BC3 7 HOH R . ? HOH H 1087 . ? 1_554 ?
73 BC3 7 ASP A 4 A ASP L 1 . ? 1_554 ?
74 BC3 7 ALA A 3 B ALA L 1 . ? 1_554 ?
75 BC4 2 ASN B 53 G ASN H 60 . ? 1_555 ?
76 BC4 2 ACY H . ? ACY H 1004 . ? 1_555 ?
#
_pdbx_entry_details.entry_id 3DD2
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details
;THE INHIBITOR IS COVALENTLY CONNECTED TO ACTIVE_SITE
RESIDUES:
1) VIA A HEMIKETAL GROUP TO OG SER H 195,
2) VIA A METHYLENE GROUP TO NE2 HIS H 57.
;
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 ALA L 1 B ? 44.35 -143.43
2 1 PHE L 7 ? ? -137.20 -89.50
3 1 TYR H 60 A ? -154.70 84.03
4 1 ASN H 60 G ? -161.25 85.97
5 1 HIS H 71 ? ? -121.71 -61.53
6 1 GLU H 77 ? ? -106.34 78.02
7 1 ILE H 79 ? ? -123.73 -65.73
8 1 SER H 214 ? ? -122.06 -58.66
#
loop_
_pdbx_validate_chiral.id
_pdbx_validate_chiral.PDB_model_num
_pdbx_validate_chiral.auth_atom_id
_pdbx_validate_chiral.label_alt_id
_pdbx_validate_chiral.auth_asym_id
_pdbx_validate_chiral.auth_comp_id
_pdbx_validate_chiral.auth_seq_id
_pdbx_validate_chiral.PDB_ins_code
_pdbx_validate_chiral.details
_pdbx_validate_chiral.omega
1 1 "C2'" ? B CFL 6 ? 'WRONG HAND' .
2 1 "C2'" ? B CFL 11 ? 'WRONG HAND' .
3 1 "C2'" ? B CFL 19 ? 'WRONG HAND' .
4 1 "C2'" ? B CFL 23 ? 'WRONG HAND' .
5 1 "C2'" ? B CFL 24 ? 'WRONG HAND' .
6 1 "C2'" ? B CFL 25 ? 'WRONG HAND' .
#
loop_
_pdbx_validate_planes.id
_pdbx_validate_planes.PDB_model_num
_pdbx_validate_planes.auth_comp_id
_pdbx_validate_planes.auth_asym_id
_pdbx_validate_planes.auth_seq_id
_pdbx_validate_planes.PDB_ins_code
_pdbx_validate_planes.label_alt_id
_pdbx_validate_planes.rmsd
_pdbx_validate_planes.type
1 1 A B 7 ? ? 0.059 'SIDE CHAIN'
2 1 A B 9 ? ? 0.056 'SIDE CHAIN'
3 1 G B 13 ? ? 0.071 'SIDE CHAIN'
#
_pdbx_molecule_features.prd_id PRD_000020
_pdbx_molecule_features.name D-Phe-Pro-Arg-CH2Cl
_pdbx_molecule_features.type Peptide-like
_pdbx_molecule_features.class Inhibitor
_pdbx_molecule_features.details ?
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_000020
_pdbx_molecule.asym_id E
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 C CFL 6 B CFL 6 ? DC ?
2 C CFL 11 B CFL 11 ? DC ?
3 C UFT 12 B UFT 12 ? DU ?
4 C UFT 17 B UFT 17 ? DU ?
5 C CFL 19 B CFL 19 ? DC ?
6 C UFT 20 B UFT 20 ? DU ?
7 C UFT 21 B UFT 21 ? DU ?
8 C CFL 23 B CFL 23 ? DC ?
9 C CFL 24 B CFL 24 ? DC ?
10 C CFL 25 B CFL 25 ? DC ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
0G6 N N N N 1
0G6 CA C N R 2
0G6 C C N N 3
0G6 O O N N 4
0G6 CB C N N 5
0G6 CG C Y N 6
0G6 CD1 C Y N 7
0G6 CD2 C Y N 8
0G6 CE1 C Y N 9
0G6 CE2 C Y N 10
0G6 CZ C Y N 11
0G6 N1 N N N 12
0G6 CA1 C N S 13
0G6 C1 C N N 14
0G6 O1 O N N 15
0G6 CB1 C N N 16
0G6 CG1 C N N 17
0G6 CD C N N 18
0G6 N2 N N N 19
0G6 CA2 C N S 20
0G6 C2 C N S 21
0G6 O2 O N N 22
0G6 CB2 C N N 23
0G6 CG2 C N N 24
0G6 CD3 C N N 25
0G6 NE N N N 26
0G6 CZ1 C N N 27
0G6 NH1 N N N 28
0G6 NH2 N N N 29
0G6 C3 C N N 30
0G6 CL CL N N 31
0G6 H H N N 32
0G6 H2 H N N 33
0G6 HA H N N 34
0G6 HB2 H N N 35
0G6 HB3 H N N 36
0G6 HD1 H N N 37
0G6 HD2 H N N 38
0G6 HE1 H N N 39
0G6 HE2 H N N 40
0G6 HZ H N N 41
0G6 HA1 H N N 42
0G6 HB21 H N N 43
0G6 HB31 H N N 44
0G6 HG2 H N N 45
0G6 HG3 H N N 46
0G6 HD21 H N N 47
0G6 HD3 H N N 48
0G6 H1 H N N 49
0G6 HA2 H N N 50
0G6 HB22 H N N 51
0G6 HB32 H N N 52
0G6 HG21 H N N 53
0G6 HG31 H N N 54
0G6 HD22 H N N 55
0G6 HD31 H N N 56
0G6 HE H N N 57
0G6 HH11 H N N 58
0G6 HH12 H N N 59
0G6 HH21 H N N 60
0G6 HH22 H N N 61
0G6 H11 H N N 62
0G6 H21 H N N 63
0G6 H33 H N N 64
0G6 H34 H N N 65
A OP3 O N N 66
A P P N N 67
A OP1 O N N 68
A OP2 O N N 69
A "O5'" O N N 70
A "C5'" C N N 71
A "C4'" C N R 72
A "O4'" O N N 73
A "C3'" C N S 74
A "O3'" O N N 75
A "C2'" C N R 76
A "O2'" O N N 77
A "C1'" C N R 78
A N9 N Y N 79
A C8 C Y N 80
A N7 N Y N 81
A C5 C Y N 82
A C6 C Y N 83
A N6 N N N 84
A N1 N Y N 85
A C2 C Y N 86
A N3 N Y N 87
A C4 C Y N 88
A HOP3 H N N 89
A HOP2 H N N 90
A "H5'" H N N 91
A "H5''" H N N 92
A "H4'" H N N 93
A "H3'" H N N 94
A "HO3'" H N N 95
A "H2'" H N N 96
A "HO2'" H N N 97
A "H1'" H N N 98
A H8 H N N 99
A H61 H N N 100
A H62 H N N 101
A H2 H N N 102
ACY C C N N 103
ACY O O N N 104
ACY OXT O N N 105
ACY CH3 C N N 106
ACY HXT H N N 107
ACY H1 H N N 108
ACY H2 H N N 109
ACY H3 H N N 110
ALA N N N N 111
ALA CA C N S 112
ALA C C N N 113
ALA O O N N 114
ALA CB C N N 115
ALA OXT O N N 116
ALA H H N N 117
ALA H2 H N N 118
ALA HA H N N 119
ALA HB1 H N N 120
ALA HB2 H N N 121
ALA HB3 H N N 122
ALA HXT H N N 123
ARG N N N N 124
ARG CA C N S 125
ARG C C N N 126
ARG O O N N 127
ARG CB C N N 128
ARG CG C N N 129
ARG CD C N N 130
ARG NE N N N 131
ARG CZ C N N 132
ARG NH1 N N N 133
ARG NH2 N N N 134
ARG OXT O N N 135
ARG H H N N 136
ARG H2 H N N 137
ARG HA H N N 138
ARG HB2 H N N 139
ARG HB3 H N N 140
ARG HG2 H N N 141
ARG HG3 H N N 142
ARG HD2 H N N 143
ARG HD3 H N N 144
ARG HE H N N 145
ARG HH11 H N N 146
ARG HH12 H N N 147
ARG HH21 H N N 148
ARG HH22 H N N 149
ARG HXT H N N 150
ASN N N N N 151
ASN CA C N S 152
ASN C C N N 153
ASN O O N N 154
ASN CB C N N 155
ASN CG C N N 156
ASN OD1 O N N 157
ASN ND2 N N N 158
ASN OXT O N N 159
ASN H H N N 160
ASN H2 H N N 161
ASN HA H N N 162
ASN HB2 H N N 163
ASN HB3 H N N 164
ASN HD21 H N N 165
ASN HD22 H N N 166
ASN HXT H N N 167
ASP N N N N 168
ASP CA C N S 169
ASP C C N N 170
ASP O O N N 171
ASP CB C N N 172
ASP CG C N N 173
ASP OD1 O N N 174
ASP OD2 O N N 175
ASP OXT O N N 176
ASP H H N N 177
ASP H2 H N N 178
ASP HA H N N 179
ASP HB2 H N N 180
ASP HB3 H N N 181
ASP HD2 H N N 182
ASP HXT H N N 183
CFL O3P O N N 184
CFL P P N N 185
CFL O1P O N N 186
CFL O2P O N N 187
CFL "O5'" O N N 188
CFL "C5'" C N N 189
CFL "C4'" C N R 190
CFL "O4'" O N N 191
CFL "C3'" C N R 192
CFL "O3'" O N N 193
CFL "C2'" C N S 194
CFL "C1'" C N R 195
CFL N1 N N N 196
CFL C2 C N N 197
CFL O2 O N N 198
CFL N3 N N N 199
CFL C4 C N N 200
CFL N4 N N N 201
CFL C5 C N N 202
CFL C6 C N N 203
CFL F F N N 204
CFL HO3P H N N 205
CFL HO1P H N N 206
CFL "H5'1" H N N 207
CFL "H5'2" H N N 208
CFL "H4'" H N N 209
CFL "H3'" H N N 210
CFL "HO3'" H N N 211
CFL "H2'" H N N 212
CFL "H1'" H N N 213
CFL HN41 H N N 214
CFL HN42 H N N 215
CFL H5 H N N 216
CFL H6 H N N 217
CYS N N N N 218
CYS CA C N R 219
CYS C C N N 220
CYS O O N N 221
CYS CB C N N 222
CYS SG S N N 223
CYS OXT O N N 224
CYS H H N N 225
CYS H2 H N N 226
CYS HA H N N 227
CYS HB2 H N N 228
CYS HB3 H N N 229
CYS HG H N N 230
CYS HXT H N N 231
DT OP3 O N N 232
DT P P N N 233
DT OP1 O N N 234
DT OP2 O N N 235
DT "O5'" O N N 236
DT "C5'" C N N 237
DT "C4'" C N R 238
DT "O4'" O N N 239
DT "C3'" C N S 240
DT "O3'" O N N 241
DT "C2'" C N N 242
DT "C1'" C N R 243
DT N1 N N N 244
DT C2 C N N 245
DT O2 O N N 246
DT N3 N N N 247
DT C4 C N N 248
DT O4 O N N 249
DT C5 C N N 250
DT C7 C N N 251
DT C6 C N N 252
DT HOP3 H N N 253
DT HOP2 H N N 254
DT "H5'" H N N 255
DT "H5''" H N N 256
DT "H4'" H N N 257
DT "H3'" H N N 258
DT "HO3'" H N N 259
DT "H2'" H N N 260
DT "H2''" H N N 261
DT "H1'" H N N 262
DT H3 H N N 263
DT H71 H N N 264
DT H72 H N N 265
DT H73 H N N 266
DT H6 H N N 267
G OP3 O N N 268
G P P N N 269
G OP1 O N N 270
G OP2 O N N 271
G "O5'" O N N 272
G "C5'" C N N 273
G "C4'" C N R 274
G "O4'" O N N 275
G "C3'" C N S 276
G "O3'" O N N 277
G "C2'" C N R 278
G "O2'" O N N 279
G "C1'" C N R 280
G N9 N Y N 281
G C8 C Y N 282
G N7 N Y N 283
G C5 C Y N 284
G C6 C N N 285
G O6 O N N 286
G N1 N N N 287
G C2 C N N 288
G N2 N N N 289
G N3 N N N 290
G C4 C Y N 291
G HOP3 H N N 292
G HOP2 H N N 293
G "H5'" H N N 294
G "H5''" H N N 295
G "H4'" H N N 296
G "H3'" H N N 297
G "HO3'" H N N 298
G "H2'" H N N 299
G "HO2'" H N N 300
G "H1'" H N N 301
G H8 H N N 302
G H1 H N N 303
G H21 H N N 304
G H22 H N N 305
GLN N N N N 306
GLN CA C N S 307
GLN C C N N 308
GLN O O N N 309
GLN CB C N N 310
GLN CG C N N 311
GLN CD C N N 312
GLN OE1 O N N 313
GLN NE2 N N N 314
GLN OXT O N N 315
GLN H H N N 316
GLN H2 H N N 317
GLN HA H N N 318
GLN HB2 H N N 319
GLN HB3 H N N 320
GLN HG2 H N N 321
GLN HG3 H N N 322
GLN HE21 H N N 323
GLN HE22 H N N 324
GLN HXT H N N 325
GLU N N N N 326
GLU CA C N S 327
GLU C C N N 328
GLU O O N N 329
GLU CB C N N 330
GLU CG C N N 331
GLU CD C N N 332
GLU OE1 O N N 333
GLU OE2 O N N 334
GLU OXT O N N 335
GLU H H N N 336
GLU H2 H N N 337
GLU HA H N N 338
GLU HB2 H N N 339
GLU HB3 H N N 340
GLU HG2 H N N 341
GLU HG3 H N N 342
GLU HE2 H N N 343
GLU HXT H N N 344
GLY N N N N 345
GLY CA C N N 346
GLY C C N N 347
GLY O O N N 348
GLY OXT O N N 349
GLY H H N N 350
GLY H2 H N N 351
GLY HA2 H N N 352
GLY HA3 H N N 353
GLY HXT H N N 354
HIS N N N N 355
HIS CA C N S 356
HIS C C N N 357
HIS O O N N 358
HIS CB C N N 359
HIS CG C Y N 360
HIS ND1 N Y N 361
HIS CD2 C Y N 362
HIS CE1 C Y N 363
HIS NE2 N Y N 364
HIS OXT O N N 365
HIS H H N N 366
HIS H2 H N N 367
HIS HA H N N 368
HIS HB2 H N N 369
HIS HB3 H N N 370
HIS HD1 H N N 371
HIS HD2 H N N 372
HIS HE1 H N N 373
HIS HE2 H N N 374
HIS HXT H N N 375
HOH O O N N 376
HOH H1 H N N 377
HOH H2 H N N 378
ILE N N N N 379
ILE CA C N S 380
ILE C C N N 381
ILE O O N N 382
ILE CB C N S 383
ILE CG1 C N N 384
ILE CG2 C N N 385
ILE CD1 C N N 386
ILE OXT O N N 387
ILE H H N N 388
ILE H2 H N N 389
ILE HA H N N 390
ILE HB H N N 391
ILE HG12 H N N 392
ILE HG13 H N N 393
ILE HG21 H N N 394
ILE HG22 H N N 395
ILE HG23 H N N 396
ILE HD11 H N N 397
ILE HD12 H N N 398
ILE HD13 H N N 399
ILE HXT H N N 400
LEU N N N N 401
LEU CA C N S 402
LEU C C N N 403
LEU O O N N 404
LEU CB C N N 405
LEU CG C N N 406
LEU CD1 C N N 407
LEU CD2 C N N 408
LEU OXT O N N 409
LEU H H N N 410
LEU H2 H N N 411
LEU HA H N N 412
LEU HB2 H N N 413
LEU HB3 H N N 414
LEU HG H N N 415
LEU HD11 H N N 416
LEU HD12 H N N 417
LEU HD13 H N N 418
LEU HD21 H N N 419
LEU HD22 H N N 420
LEU HD23 H N N 421
LEU HXT H N N 422
LYS N N N N 423
LYS CA C N S 424
LYS C C N N 425
LYS O O N N 426
LYS CB C N N 427
LYS CG C N N 428
LYS CD C N N 429
LYS CE C N N 430
LYS NZ N N N 431
LYS OXT O N N 432
LYS H H N N 433
LYS H2 H N N 434
LYS HA H N N 435
LYS HB2 H N N 436
LYS HB3 H N N 437
LYS HG2 H N N 438
LYS HG3 H N N 439
LYS HD2 H N N 440
LYS HD3 H N N 441
LYS HE2 H N N 442
LYS HE3 H N N 443
LYS HZ1 H N N 444
LYS HZ2 H N N 445
LYS HZ3 H N N 446
LYS HXT H N N 447
MET N N N N 448
MET CA C N S 449
MET C C N N 450
MET O O N N 451
MET CB C N N 452
MET CG C N N 453
MET SD S N N 454
MET CE C N N 455
MET OXT O N N 456
MET H H N N 457
MET H2 H N N 458
MET HA H N N 459
MET HB2 H N N 460
MET HB3 H N N 461
MET HG2 H N N 462
MET HG3 H N N 463
MET HE1 H N N 464
MET HE2 H N N 465
MET HE3 H N N 466
MET HXT H N N 467
MG MG MG N N 468
P6G O1 O N N 469
P6G C2 C N N 470
P6G C3 C N N 471
P6G O4 O N N 472
P6G C5 C N N 473
P6G C6 C N N 474
P6G O7 O N N 475
P6G C8 C N N 476
P6G C9 C N N 477
P6G O10 O N N 478
P6G C11 C N N 479
P6G C12 C N N 480
P6G O13 O N N 481
P6G C14 C N N 482
P6G C15 C N N 483
P6G O16 O N N 484
P6G C17 C N N 485
P6G C18 C N N 486
P6G O19 O N N 487
P6G H1 H N N 488
P6G H21 H N N 489
P6G H22 H N N 490
P6G H31 H N N 491
P6G H32 H N N 492
P6G H51 H N N 493
P6G H52 H N N 494
P6G H61 H N N 495
P6G H62 H N N 496
P6G H81 H N N 497
P6G H82 H N N 498
P6G H91 H N N 499
P6G H92 H N N 500
P6G H111 H N N 501
P6G H112 H N N 502
P6G H121 H N N 503
P6G H122 H N N 504
P6G H141 H N N 505
P6G H142 H N N 506
P6G H151 H N N 507
P6G H152 H N N 508
P6G H171 H N N 509
P6G H172 H N N 510
P6G H181 H N N 511
P6G H182 H N N 512
P6G H19 H N N 513
PEG C1 C N N 514
PEG O1 O N N 515
PEG C2 C N N 516
PEG O2 O N N 517
PEG C3 C N N 518
PEG C4 C N N 519
PEG O4 O N N 520
PEG H11 H N N 521
PEG H12 H N N 522
PEG HO1 H N N 523
PEG H21 H N N 524
PEG H22 H N N 525
PEG H31 H N N 526
PEG H32 H N N 527
PEG H41 H N N 528
PEG H42 H N N 529
PEG HO4 H N N 530
PHE N N N N 531
PHE CA C N S 532
PHE C C N N 533
PHE O O N N 534
PHE CB C N N 535
PHE CG C Y N 536
PHE CD1 C Y N 537
PHE CD2 C Y N 538
PHE CE1 C Y N 539
PHE CE2 C Y N 540
PHE CZ C Y N 541
PHE OXT O N N 542
PHE H H N N 543
PHE H2 H N N 544
PHE HA H N N 545
PHE HB2 H N N 546
PHE HB3 H N N 547
PHE HD1 H N N 548
PHE HD2 H N N 549
PHE HE1 H N N 550
PHE HE2 H N N 551
PHE HZ H N N 552
PHE HXT H N N 553
PRO N N N N 554
PRO CA C N S 555
PRO C C N N 556
PRO O O N N 557
PRO CB C N N 558
PRO CG C N N 559
PRO CD C N N 560
PRO OXT O N N 561
PRO H H N N 562
PRO HA H N N 563
PRO HB2 H N N 564
PRO HB3 H N N 565
PRO HG2 H N N 566
PRO HG3 H N N 567
PRO HD2 H N N 568
PRO HD3 H N N 569
PRO HXT H N N 570
SER N N N N 571
SER CA C N S 572
SER C C N N 573
SER O O N N 574
SER CB C N N 575
SER OG O N N 576
SER OXT O N N 577
SER H H N N 578
SER H2 H N N 579
SER HA H N N 580
SER HB2 H N N 581
SER HB3 H N N 582
SER HG H N N 583
SER HXT H N N 584
THR N N N N 585
THR CA C N S 586
THR C C N N 587
THR O O N N 588
THR CB C N R 589
THR OG1 O N N 590
THR CG2 C N N 591
THR OXT O N N 592
THR H H N N 593
THR H2 H N N 594
THR HA H N N 595
THR HB H N N 596
THR HG1 H N N 597
THR HG21 H N N 598
THR HG22 H N N 599
THR HG23 H N N 600
THR HXT H N N 601
TRP N N N N 602
TRP CA C N S 603
TRP C C N N 604
TRP O O N N 605
TRP CB C N N 606
TRP CG C Y N 607
TRP CD1 C Y N 608
TRP CD2 C Y N 609
TRP NE1 N Y N 610
TRP CE2 C Y N 611
TRP CE3 C Y N 612
TRP CZ2 C Y N 613
TRP CZ3 C Y N 614
TRP CH2 C Y N 615
TRP OXT O N N 616
TRP H H N N 617
TRP H2 H N N 618
TRP HA H N N 619
TRP HB2 H N N 620
TRP HB3 H N N 621
TRP HD1 H N N 622
TRP HE1 H N N 623
TRP HE3 H N N 624
TRP HZ2 H N N 625
TRP HZ3 H N N 626
TRP HH2 H N N 627
TRP HXT H N N 628
TYR N N N N 629
TYR CA C N S 630
TYR C C N N 631
TYR O O N N 632
TYR CB C N N 633
TYR CG C Y N 634
TYR CD1 C Y N 635
TYR CD2 C Y N 636
TYR CE1 C Y N 637
TYR CE2 C Y N 638
TYR CZ C Y N 639
TYR OH O N N 640
TYR OXT O N N 641
TYR H H N N 642
TYR H2 H N N 643
TYR HA H N N 644
TYR HB2 H N N 645
TYR HB3 H N N 646
TYR HD1 H N N 647
TYR HD2 H N N 648
TYR HE1 H N N 649
TYR HE2 H N N 650
TYR HH H N N 651
TYR HXT H N N 652
UFT OP3 O N N 653
UFT P P N N 654
UFT OP1 O N N 655
UFT OP2 O N N 656
UFT "O5'" O N N 657
UFT N1 N N N 658
UFT C6 C N N 659
UFT C2 C N N 660
UFT O2 O N N 661
UFT N3 N N N 662
UFT C4 C N N 663
UFT O4 O N N 664
UFT C5 C N N 665
UFT "F2'" F N N 666
UFT "C2'" C N R 667
UFT "C5'" C N N 668
UFT "C4'" C N R 669
UFT "O4'" O N N 670
UFT "C1'" C N R 671
UFT "C3'" C N R 672
UFT "O3'" O N N 673
UFT HOP3 H N N 674
UFT HOP2 H N N 675
UFT H6 H N N 676
UFT H5 H N N 677
UFT "H2'" H N N 678
UFT "H5'" H N N 679
UFT "H5'A" H N N 680
UFT "H4'" H N N 681
UFT "H1'" H N N 682
UFT "H3'" H N N 683
UFT "HO3'" H N N 684
UFT HN3 H N N 685
VAL N N N N 686
VAL CA C N S 687
VAL C C N N 688
VAL O O N N 689
VAL CB C N N 690
VAL CG1 C N N 691
VAL CG2 C N N 692
VAL OXT O N N 693
VAL H H N N 694
VAL H2 H N N 695
VAL HA H N N 696
VAL HB H N N 697
VAL HG11 H N N 698
VAL HG12 H N N 699
VAL HG13 H N N 700
VAL HG21 H N N 701
VAL HG22 H N N 702
VAL HG23 H N N 703
VAL HXT H N N 704
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0G6 N CA sing N N 1
0G6 N H sing N N 2
0G6 N H2 sing N N 3
0G6 CA C sing N N 4
0G6 CA CB sing N N 5
0G6 CA HA sing N N 6
0G6 C O doub N N 7
0G6 C N1 sing N N 8
0G6 CB CG sing N N 9
0G6 CB HB2 sing N N 10
0G6 CB HB3 sing N N 11
0G6 CG CD1 doub Y N 12
0G6 CG CD2 sing Y N 13
0G6 CD1 CE1 sing Y N 14
0G6 CD1 HD1 sing N N 15
0G6 CD2 CE2 doub Y N 16
0G6 CD2 HD2 sing N N 17
0G6 CE1 CZ doub Y N 18
0G6 CE1 HE1 sing N N 19
0G6 CE2 CZ sing Y N 20
0G6 CE2 HE2 sing N N 21
0G6 CZ HZ sing N N 22
0G6 N1 CA1 sing N N 23
0G6 N1 CD sing N N 24
0G6 CA1 C1 sing N N 25
0G6 CA1 CB1 sing N N 26
0G6 CA1 HA1 sing N N 27
0G6 C1 O1 doub N N 28
0G6 C1 N2 sing N N 29
0G6 CB1 CG1 sing N N 30
0G6 CB1 HB21 sing N N 31
0G6 CB1 HB31 sing N N 32
0G6 CG1 CD sing N N 33
0G6 CG1 HG2 sing N N 34
0G6 CG1 HG3 sing N N 35
0G6 CD HD21 sing N N 36
0G6 CD HD3 sing N N 37
0G6 N2 CA2 sing N N 38
0G6 N2 H1 sing N N 39
0G6 CA2 C2 sing N N 40
0G6 CA2 CB2 sing N N 41
0G6 CA2 HA2 sing N N 42
0G6 C2 O2 sing N N 43
0G6 C2 C3 sing N N 44
0G6 CB2 CG2 sing N N 45
0G6 CB2 HB22 sing N N 46
0G6 CB2 HB32 sing N N 47
0G6 CG2 CD3 sing N N 48
0G6 CG2 HG21 sing N N 49
0G6 CG2 HG31 sing N N 50
0G6 CD3 NE sing N N 51
0G6 CD3 HD22 sing N N 52
0G6 CD3 HD31 sing N N 53
0G6 NE CZ1 sing N N 54
0G6 NE HE sing N N 55
0G6 CZ1 NH1 sing N N 56
0G6 CZ1 NH2 doub N N 57
0G6 NH1 HH11 sing N N 58
0G6 NH1 HH12 sing N N 59
0G6 NH2 HH21 sing N N 60
0G6 NH2 HH22 sing N N 61
0G6 C3 H11 sing N N 62
0G6 C3 H21 sing N N 63
0G6 CL C3 sing N N 64
0G6 C2 H33 sing N N 65
0G6 O2 H34 sing N N 66
A OP3 P sing N N 67
A OP3 HOP3 sing N N 68
A P OP1 doub N N 69
A P OP2 sing N N 70
A P "O5'" sing N N 71
A OP2 HOP2 sing N N 72
A "O5'" "C5'" sing N N 73
A "C5'" "C4'" sing N N 74
A "C5'" "H5'" sing N N 75
A "C5'" "H5''" sing N N 76
A "C4'" "O4'" sing N N 77
A "C4'" "C3'" sing N N 78
A "C4'" "H4'" sing N N 79
A "O4'" "C1'" sing N N 80
A "C3'" "O3'" sing N N 81
A "C3'" "C2'" sing N N 82
A "C3'" "H3'" sing N N 83
A "O3'" "HO3'" sing N N 84
A "C2'" "O2'" sing N N 85
A "C2'" "C1'" sing N N 86
A "C2'" "H2'" sing N N 87
A "O2'" "HO2'" sing N N 88
A "C1'" N9 sing N N 89
A "C1'" "H1'" sing N N 90
A N9 C8 sing Y N 91
A N9 C4 sing Y N 92
A C8 N7 doub Y N 93
A C8 H8 sing N N 94
A N7 C5 sing Y N 95
A C5 C6 sing Y N 96
A C5 C4 doub Y N 97
A C6 N6 sing N N 98
A C6 N1 doub Y N 99
A N6 H61 sing N N 100
A N6 H62 sing N N 101
A N1 C2 sing Y N 102
A C2 N3 doub Y N 103
A C2 H2 sing N N 104
A N3 C4 sing Y N 105
ACY C O doub N N 106
ACY C OXT sing N N 107
ACY C CH3 sing N N 108
ACY OXT HXT sing N N 109
ACY CH3 H1 sing N N 110
ACY CH3 H2 sing N N 111
ACY CH3 H3 sing N N 112
ALA N CA sing N N 113
ALA N H sing N N 114
ALA N H2 sing N N 115
ALA CA C sing N N 116
ALA CA CB sing N N 117
ALA CA HA sing N N 118
ALA C O doub N N 119
ALA C OXT sing N N 120
ALA CB HB1 sing N N 121
ALA CB HB2 sing N N 122
ALA CB HB3 sing N N 123
ALA OXT HXT sing N N 124
ARG N CA sing N N 125
ARG N H sing N N 126
ARG N H2 sing N N 127
ARG CA C sing N N 128
ARG CA CB sing N N 129
ARG CA HA sing N N 130
ARG C O doub N N 131
ARG C OXT sing N N 132
ARG CB CG sing N N 133
ARG CB HB2 sing N N 134
ARG CB HB3 sing N N 135
ARG CG CD sing N N 136
ARG CG HG2 sing N N 137
ARG CG HG3 sing N N 138
ARG CD NE sing N N 139
ARG CD HD2 sing N N 140
ARG CD HD3 sing N N 141
ARG NE CZ sing N N 142
ARG NE HE sing N N 143
ARG CZ NH1 sing N N 144
ARG CZ NH2 doub N N 145
ARG NH1 HH11 sing N N 146
ARG NH1 HH12 sing N N 147
ARG NH2 HH21 sing N N 148
ARG NH2 HH22 sing N N 149
ARG OXT HXT sing N N 150
ASN N CA sing N N 151
ASN N H sing N N 152
ASN N H2 sing N N 153
ASN CA C sing N N 154
ASN CA CB sing N N 155
ASN CA HA sing N N 156
ASN C O doub N N 157
ASN C OXT sing N N 158
ASN CB CG sing N N 159
ASN CB HB2 sing N N 160
ASN CB HB3 sing N N 161
ASN CG OD1 doub N N 162
ASN CG ND2 sing N N 163
ASN ND2 HD21 sing N N 164
ASN ND2 HD22 sing N N 165
ASN OXT HXT sing N N 166
ASP N CA sing N N 167
ASP N H sing N N 168
ASP N H2 sing N N 169
ASP CA C sing N N 170
ASP CA CB sing N N 171
ASP CA HA sing N N 172
ASP C O doub N N 173
ASP C OXT sing N N 174
ASP CB CG sing N N 175
ASP CB HB2 sing N N 176
ASP CB HB3 sing N N 177
ASP CG OD1 doub N N 178
ASP CG OD2 sing N N 179
ASP OD2 HD2 sing N N 180
ASP OXT HXT sing N N 181
CFL O3P P sing N N 182
CFL O3P HO3P sing N N 183
CFL P O1P sing N N 184
CFL P O2P doub N N 185
CFL P "O5'" sing N N 186
CFL O1P HO1P sing N N 187
CFL "O5'" "C5'" sing N N 188
CFL "C5'" "C4'" sing N N 189
CFL "C5'" "H5'1" sing N N 190
CFL "C5'" "H5'2" sing N N 191
CFL "C4'" "O4'" sing N N 192
CFL "C4'" "C3'" sing N N 193
CFL "C4'" "H4'" sing N N 194
CFL "O4'" "C1'" sing N N 195
CFL "C3'" "O3'" sing N N 196
CFL "C3'" "C2'" sing N N 197
CFL "C3'" "H3'" sing N N 198
CFL "O3'" "HO3'" sing N N 199
CFL "C2'" "C1'" sing N N 200
CFL "C2'" F sing N N 201
CFL "C2'" "H2'" sing N N 202
CFL "C1'" N1 sing N N 203
CFL "C1'" "H1'" sing N N 204
CFL N1 C2 sing N N 205
CFL N1 C6 sing N N 206
CFL C2 O2 doub N N 207
CFL C2 N3 sing N N 208
CFL N3 C4 doub N N 209
CFL C4 N4 sing N N 210
CFL C4 C5 sing N N 211
CFL N4 HN41 sing N N 212
CFL N4 HN42 sing N N 213
CFL C5 C6 doub N N 214
CFL C5 H5 sing N N 215
CFL C6 H6 sing N N 216
CYS N CA sing N N 217
CYS N H sing N N 218
CYS N H2 sing N N 219
CYS CA C sing N N 220
CYS CA CB sing N N 221
CYS CA HA sing N N 222
CYS C O doub N N 223
CYS C OXT sing N N 224
CYS CB SG sing N N 225
CYS CB HB2 sing N N 226
CYS CB HB3 sing N N 227
CYS SG HG sing N N 228
CYS OXT HXT sing N N 229
DT OP3 P sing N N 230
DT OP3 HOP3 sing N N 231
DT P OP1 doub N N 232
DT P OP2 sing N N 233
DT P "O5'" sing N N 234
DT OP2 HOP2 sing N N 235
DT "O5'" "C5'" sing N N 236
DT "C5'" "C4'" sing N N 237
DT "C5'" "H5'" sing N N 238
DT "C5'" "H5''" sing N N 239
DT "C4'" "O4'" sing N N 240
DT "C4'" "C3'" sing N N 241
DT "C4'" "H4'" sing N N 242
DT "O4'" "C1'" sing N N 243
DT "C3'" "O3'" sing N N 244
DT "C3'" "C2'" sing N N 245
DT "C3'" "H3'" sing N N 246
DT "O3'" "HO3'" sing N N 247
DT "C2'" "C1'" sing N N 248
DT "C2'" "H2'" sing N N 249
DT "C2'" "H2''" sing N N 250
DT "C1'" N1 sing N N 251
DT "C1'" "H1'" sing N N 252
DT N1 C2 sing N N 253
DT N1 C6 sing N N 254
DT C2 O2 doub N N 255
DT C2 N3 sing N N 256
DT N3 C4 sing N N 257
DT N3 H3 sing N N 258
DT C4 O4 doub N N 259
DT C4 C5 sing N N 260
DT C5 C7 sing N N 261
DT C5 C6 doub N N 262
DT C7 H71 sing N N 263
DT C7 H72 sing N N 264
DT C7 H73 sing N N 265
DT C6 H6 sing N N 266
G OP3 P sing N N 267
G OP3 HOP3 sing N N 268
G P OP1 doub N N 269
G P OP2 sing N N 270
G P "O5'" sing N N 271
G OP2 HOP2 sing N N 272
G "O5'" "C5'" sing N N 273
G "C5'" "C4'" sing N N 274
G "C5'" "H5'" sing N N 275
G "C5'" "H5''" sing N N 276
G "C4'" "O4'" sing N N 277
G "C4'" "C3'" sing N N 278
G "C4'" "H4'" sing N N 279
G "O4'" "C1'" sing N N 280
G "C3'" "O3'" sing N N 281
G "C3'" "C2'" sing N N 282
G "C3'" "H3'" sing N N 283
G "O3'" "HO3'" sing N N 284
G "C2'" "O2'" sing N N 285
G "C2'" "C1'" sing N N 286
G "C2'" "H2'" sing N N 287
G "O2'" "HO2'" sing N N 288
G "C1'" N9 sing N N 289
G "C1'" "H1'" sing N N 290
G N9 C8 sing Y N 291
G N9 C4 sing Y N 292
G C8 N7 doub Y N 293
G C8 H8 sing N N 294
G N7 C5 sing Y N 295
G C5 C6 sing N N 296
G C5 C4 doub Y N 297
G C6 O6 doub N N 298
G C6 N1 sing N N 299
G N1 C2 sing N N 300
G N1 H1 sing N N 301
G C2 N2 sing N N 302
G C2 N3 doub N N 303
G N2 H21 sing N N 304
G N2 H22 sing N N 305
G N3 C4 sing N N 306
GLN N CA sing N N 307
GLN N H sing N N 308
GLN N H2 sing N N 309
GLN CA C sing N N 310
GLN CA CB sing N N 311
GLN CA HA sing N N 312
GLN C O doub N N 313
GLN C OXT sing N N 314
GLN CB CG sing N N 315
GLN CB HB2 sing N N 316
GLN CB HB3 sing N N 317
GLN CG CD sing N N 318
GLN CG HG2 sing N N 319
GLN CG HG3 sing N N 320
GLN CD OE1 doub N N 321
GLN CD NE2 sing N N 322
GLN NE2 HE21 sing N N 323
GLN NE2 HE22 sing N N 324
GLN OXT HXT sing N N 325
GLU N CA sing N N 326
GLU N H sing N N 327
GLU N H2 sing N N 328
GLU CA C sing N N 329
GLU CA CB sing N N 330
GLU CA HA sing N N 331
GLU C O doub N N 332
GLU C OXT sing N N 333
GLU CB CG sing N N 334
GLU CB HB2 sing N N 335
GLU CB HB3 sing N N 336
GLU CG CD sing N N 337
GLU CG HG2 sing N N 338
GLU CG HG3 sing N N 339
GLU CD OE1 doub N N 340
GLU CD OE2 sing N N 341
GLU OE2 HE2 sing N N 342
GLU OXT HXT sing N N 343
GLY N CA sing N N 344
GLY N H sing N N 345
GLY N H2 sing N N 346
GLY CA C sing N N 347
GLY CA HA2 sing N N 348
GLY CA HA3 sing N N 349
GLY C O doub N N 350
GLY C OXT sing N N 351
GLY OXT HXT sing N N 352
HIS N CA sing N N 353
HIS N H sing N N 354
HIS N H2 sing N N 355
HIS CA C sing N N 356
HIS CA CB sing N N 357
HIS CA HA sing N N 358
HIS C O doub N N 359
HIS C OXT sing N N 360
HIS CB CG sing N N 361
HIS CB HB2 sing N N 362
HIS CB HB3 sing N N 363
HIS CG ND1 sing Y N 364
HIS CG CD2 doub Y N 365
HIS ND1 CE1 doub Y N 366
HIS ND1 HD1 sing N N 367
HIS CD2 NE2 sing Y N 368
HIS CD2 HD2 sing N N 369
HIS CE1 NE2 sing Y N 370
HIS CE1 HE1 sing N N 371
HIS NE2 HE2 sing N N 372
HIS OXT HXT sing N N 373
HOH O H1 sing N N 374
HOH O H2 sing N N 375
ILE N CA sing N N 376
ILE N H sing N N 377
ILE N H2 sing N N 378
ILE CA C sing N N 379
ILE CA CB sing N N 380
ILE CA HA sing N N 381
ILE C O doub N N 382
ILE C OXT sing N N 383
ILE CB CG1 sing N N 384
ILE CB CG2 sing N N 385
ILE CB HB sing N N 386
ILE CG1 CD1 sing N N 387
ILE CG1 HG12 sing N N 388
ILE CG1 HG13 sing N N 389
ILE CG2 HG21 sing N N 390
ILE CG2 HG22 sing N N 391
ILE CG2 HG23 sing N N 392
ILE CD1 HD11 sing N N 393
ILE CD1 HD12 sing N N 394
ILE CD1 HD13 sing N N 395
ILE OXT HXT sing N N 396
LEU N CA sing N N 397
LEU N H sing N N 398
LEU N H2 sing N N 399
LEU CA C sing N N 400
LEU CA CB sing N N 401
LEU CA HA sing N N 402
LEU C O doub N N 403
LEU C OXT sing N N 404
LEU CB CG sing N N 405
LEU CB HB2 sing N N 406
LEU CB HB3 sing N N 407
LEU CG CD1 sing N N 408
LEU CG CD2 sing N N 409
LEU CG HG sing N N 410
LEU CD1 HD11 sing N N 411
LEU CD1 HD12 sing N N 412
LEU CD1 HD13 sing N N 413
LEU CD2 HD21 sing N N 414
LEU CD2 HD22 sing N N 415
LEU CD2 HD23 sing N N 416
LEU OXT HXT sing N N 417
LYS N CA sing N N 418
LYS N H sing N N 419
LYS N H2 sing N N 420
LYS CA C sing N N 421
LYS CA CB sing N N 422
LYS CA HA sing N N 423
LYS C O doub N N 424
LYS C OXT sing N N 425
LYS CB CG sing N N 426
LYS CB HB2 sing N N 427
LYS CB HB3 sing N N 428
LYS CG CD sing N N 429
LYS CG HG2 sing N N 430
LYS CG HG3 sing N N 431
LYS CD CE sing N N 432
LYS CD HD2 sing N N 433
LYS CD HD3 sing N N 434
LYS CE NZ sing N N 435
LYS CE HE2 sing N N 436
LYS CE HE3 sing N N 437
LYS NZ HZ1 sing N N 438
LYS NZ HZ2 sing N N 439
LYS NZ HZ3 sing N N 440
LYS OXT HXT sing N N 441
MET N CA sing N N 442
MET N H sing N N 443
MET N H2 sing N N 444
MET CA C sing N N 445
MET CA CB sing N N 446
MET CA HA sing N N 447
MET C O doub N N 448
MET C OXT sing N N 449
MET CB CG sing N N 450
MET CB HB2 sing N N 451
MET CB HB3 sing N N 452
MET CG SD sing N N 453
MET CG HG2 sing N N 454
MET CG HG3 sing N N 455
MET SD CE sing N N 456
MET CE HE1 sing N N 457
MET CE HE2 sing N N 458
MET CE HE3 sing N N 459
MET OXT HXT sing N N 460
P6G O1 C2 sing N N 461
P6G O1 H1 sing N N 462
P6G C2 C3 sing N N 463
P6G C2 H21 sing N N 464
P6G C2 H22 sing N N 465
P6G C3 O4 sing N N 466
P6G C3 H31 sing N N 467
P6G C3 H32 sing N N 468
P6G O4 C5 sing N N 469
P6G C5 C6 sing N N 470
P6G C5 H51 sing N N 471
P6G C5 H52 sing N N 472
P6G C6 O7 sing N N 473
P6G C6 H61 sing N N 474
P6G C6 H62 sing N N 475
P6G O7 C8 sing N N 476
P6G C8 C9 sing N N 477
P6G C8 H81 sing N N 478
P6G C8 H82 sing N N 479
P6G C9 O10 sing N N 480
P6G C9 H91 sing N N 481
P6G C9 H92 sing N N 482
P6G O10 C11 sing N N 483
P6G C11 C12 sing N N 484
P6G C11 H111 sing N N 485
P6G C11 H112 sing N N 486
P6G C12 O13 sing N N 487
P6G C12 H121 sing N N 488
P6G C12 H122 sing N N 489
P6G O13 C14 sing N N 490
P6G C14 C15 sing N N 491
P6G C14 H141 sing N N 492
P6G C14 H142 sing N N 493
P6G C15 O16 sing N N 494
P6G C15 H151 sing N N 495
P6G C15 H152 sing N N 496
P6G O16 C17 sing N N 497
P6G C17 C18 sing N N 498
P6G C17 H171 sing N N 499
P6G C17 H172 sing N N 500
P6G C18 O19 sing N N 501
P6G C18 H181 sing N N 502
P6G C18 H182 sing N N 503
P6G O19 H19 sing N N 504
PEG C1 O1 sing N N 505
PEG C1 C2 sing N N 506
PEG C1 H11 sing N N 507
PEG C1 H12 sing N N 508
PEG O1 HO1 sing N N 509
PEG C2 O2 sing N N 510
PEG C2 H21 sing N N 511
PEG C2 H22 sing N N 512
PEG O2 C3 sing N N 513
PEG C3 C4 sing N N 514
PEG C3 H31 sing N N 515
PEG C3 H32 sing N N 516
PEG C4 O4 sing N N 517
PEG C4 H41 sing N N 518
PEG C4 H42 sing N N 519
PEG O4 HO4 sing N N 520
PHE N CA sing N N 521
PHE N H sing N N 522
PHE N H2 sing N N 523
PHE CA C sing N N 524
PHE CA CB sing N N 525
PHE CA HA sing N N 526
PHE C O doub N N 527
PHE C OXT sing N N 528
PHE CB CG sing N N 529
PHE CB HB2 sing N N 530
PHE CB HB3 sing N N 531
PHE CG CD1 doub Y N 532
PHE CG CD2 sing Y N 533
PHE CD1 CE1 sing Y N 534
PHE CD1 HD1 sing N N 535
PHE CD2 CE2 doub Y N 536
PHE CD2 HD2 sing N N 537
PHE CE1 CZ doub Y N 538
PHE CE1 HE1 sing N N 539
PHE CE2 CZ sing Y N 540
PHE CE2 HE2 sing N N 541
PHE CZ HZ sing N N 542
PHE OXT HXT sing N N 543
PRO N CA sing N N 544
PRO N CD sing N N 545
PRO N H sing N N 546
PRO CA C sing N N 547
PRO CA CB sing N N 548
PRO CA HA sing N N 549
PRO C O doub N N 550
PRO C OXT sing N N 551
PRO CB CG sing N N 552
PRO CB HB2 sing N N 553
PRO CB HB3 sing N N 554
PRO CG CD sing N N 555
PRO CG HG2 sing N N 556
PRO CG HG3 sing N N 557
PRO CD HD2 sing N N 558
PRO CD HD3 sing N N 559
PRO OXT HXT sing N N 560
SER N CA sing N N 561
SER N H sing N N 562
SER N H2 sing N N 563
SER CA C sing N N 564
SER CA CB sing N N 565
SER CA HA sing N N 566
SER C O doub N N 567
SER C OXT sing N N 568
SER CB OG sing N N 569
SER CB HB2 sing N N 570
SER CB HB3 sing N N 571
SER OG HG sing N N 572
SER OXT HXT sing N N 573
THR N CA sing N N 574
THR N H sing N N 575
THR N H2 sing N N 576
THR CA C sing N N 577
THR CA CB sing N N 578
THR CA HA sing N N 579
THR C O doub N N 580
THR C OXT sing N N 581
THR CB OG1 sing N N 582
THR CB CG2 sing N N 583
THR CB HB sing N N 584
THR OG1 HG1 sing N N 585
THR CG2 HG21 sing N N 586
THR CG2 HG22 sing N N 587
THR CG2 HG23 sing N N 588
THR OXT HXT sing N N 589
TRP N CA sing N N 590
TRP N H sing N N 591
TRP N H2 sing N N 592
TRP CA C sing N N 593
TRP CA CB sing N N 594
TRP CA HA sing N N 595
TRP C O doub N N 596
TRP C OXT sing N N 597
TRP CB CG sing N N 598
TRP CB HB2 sing N N 599
TRP CB HB3 sing N N 600
TRP CG CD1 doub Y N 601
TRP CG CD2 sing Y N 602
TRP CD1 NE1 sing Y N 603
TRP CD1 HD1 sing N N 604
TRP CD2 CE2 doub Y N 605
TRP CD2 CE3 sing Y N 606
TRP NE1 CE2 sing Y N 607
TRP NE1 HE1 sing N N 608
TRP CE2 CZ2 sing Y N 609
TRP CE3 CZ3 doub Y N 610
TRP CE3 HE3 sing N N 611
TRP CZ2 CH2 doub Y N 612
TRP CZ2 HZ2 sing N N 613
TRP CZ3 CH2 sing Y N 614
TRP CZ3 HZ3 sing N N 615
TRP CH2 HH2 sing N N 616
TRP OXT HXT sing N N 617
TYR N CA sing N N 618
TYR N H sing N N 619
TYR N H2 sing N N 620
TYR CA C sing N N 621
TYR CA CB sing N N 622
TYR CA HA sing N N 623
TYR C O doub N N 624
TYR C OXT sing N N 625
TYR CB CG sing N N 626
TYR CB HB2 sing N N 627
TYR CB HB3 sing N N 628
TYR CG CD1 doub Y N 629
TYR CG CD2 sing Y N 630
TYR CD1 CE1 sing Y N 631
TYR CD1 HD1 sing N N 632
TYR CD2 CE2 doub Y N 633
TYR CD2 HD2 sing N N 634
TYR CE1 CZ doub Y N 635
TYR CE1 HE1 sing N N 636
TYR CE2 CZ sing Y N 637
TYR CE2 HE2 sing N N 638
TYR CZ OH sing N N 639
TYR OH HH sing N N 640
TYR OXT HXT sing N N 641
UFT OP3 P sing N N 642
UFT OP1 P doub N N 643
UFT P OP2 sing N N 644
UFT P "O5'" sing N N 645
UFT OP3 HOP3 sing N N 646
UFT OP2 HOP2 sing N N 647
UFT "O5'" "C5'" sing N N 648
UFT C6 N1 sing N N 649
UFT N1 C2 sing N N 650
UFT N1 "C1'" sing N N 651
UFT C5 C6 doub N N 652
UFT C6 H6 sing N N 653
UFT N3 C2 sing N N 654
UFT C2 O2 doub N N 655
UFT C4 N3 sing N N 656
UFT O4 C4 doub N N 657
UFT C5 C4 sing N N 658
UFT C5 H5 sing N N 659
UFT "C2'" "F2'" sing N N 660
UFT "C3'" "C2'" sing N N 661
UFT "C2'" "C1'" sing N N 662
UFT "C2'" "H2'" sing N N 663
UFT "C5'" "C4'" sing N N 664
UFT "C5'" "H5'" sing N N 665
UFT "C5'" "H5'A" sing N N 666
UFT "C3'" "C4'" sing N N 667
UFT "C4'" "O4'" sing N N 668
UFT "C4'" "H4'" sing N N 669
UFT "O4'" "C1'" sing N N 670
UFT "C1'" "H1'" sing N N 671
UFT "C3'" "O3'" sing N N 672
UFT "C3'" "H3'" sing N N 673
UFT "O3'" "HO3'" sing N N 674
UFT N3 HN3 sing N N 675
VAL N CA sing N N 676
VAL N H sing N N 677
VAL N H2 sing N N 678
VAL CA C sing N N 679
VAL CA CB sing N N 680
VAL CA HA sing N N 681
VAL C O doub N N 682
VAL C OXT sing N N 683
VAL CB CG1 sing N N 684
VAL CB CG2 sing N N 685
VAL CB HB sing N N 686
VAL CG1 HG11 sing N N 687
VAL CG1 HG12 sing N N 688
VAL CG1 HG13 sing N N 689
VAL CG2 HG21 sing N N 690
VAL CG2 HG22 sing N N 691
VAL CG2 HG23 sing N N 692
VAL OXT HXT sing N N 693
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
3DD2 'double helix'
3DD2 'a-form double helix'
3DD2 'hairpin loop'
3DD2 'triple helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 C G 1 1_555 C CFL 25 1_555 -0.428 -0.065 0.034 -5.517 -2.384 0.342 1 B_G1:CFL25_B B 1 ? B 25 ? 19 1
1 C G 2 1_555 C CFL 24 1_555 -0.540 -0.189 0.183 2.133 -3.715 4.401 2 B_G2:CFL24_B B 2 ? B 24 ? 19 1
1 C G 3 1_555 C CFL 23 1_555 -0.021 -0.217 -0.126 -1.609 -6.544 3.927 3 B_G3:CFL23_B B 3 ? B 23 ? 19 1
1 C A 5 1_555 C A 22 1_555 6.647 -0.661 0.247 -48.632 3.748 56.643 4 B_A5:A22_B B 5 ? B 22 ? ? 5
1 C A 8 1_555 C UFT 21 1_555 -0.119 -0.059 0.143 1.395 -12.534 1.085 5 B_A8:UFT21_B B 8 ? B 21 ? 20 1
1 C A 9 1_555 C UFT 20 1_555 0.160 -0.138 0.514 11.277 -17.665 0.922 6 B_A9:UFT20_B B 9 ? B 20 ? 20 1
1 C G 10 1_555 C CFL 19 1_555 0.010 -0.149 -0.099 -1.324 -8.503 -1.156 7 B_G10:CFL19_B B 10 ? B 19 ? 19 1
1 C CFL 11 1_555 C G 16 1_555 0.281 -0.125 -0.121 9.397 -10.019 0.302 8 B_CFL11:G16_B B 11 ? B 16 ? 19 1
1 C UFT 12 1_555 C A 15 1_555 -3.272 0.802 0.852 11.004 -24.303 93.197 9 B_UFT12:A15_B B 12 ? B 15 ? ? 5
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 C G 1 1_555 C CFL 25 1_555 C G 2 1_555 C CFL 24 1_555 0.291 -1.976 3.012 -0.753 2.471 28.896 -4.432 -0.730 2.828 4.940
1.506 29.009 1 BB_G1G2:CFL24CFL25_BB B 1 ? B 25 ? B 2 ? B 24 ?
1 C G 2 1_555 C CFL 24 1_555 C G 3 1_555 C CFL 23 1_555 0.200 -2.019 3.288 2.549 6.068 31.567 -4.664 0.072 2.867
11.004 -4.622 32.229 2 BB_G2G3:CFL23CFL24_BB B 2 ? B 24 ? B 3 ? B 23 ?
1 C G 3 1_555 C CFL 23 1_555 C A 5 1_555 C A 22 1_555 1.204 -0.909 6.630 27.270 20.280 76.192 -1.752 0.513 6.360
15.723 -21.143 82.364 3 BB_G3A5:A22CFL23_BB B 3 ? B 23 ? B 5 ? B 22 ?
1 C A 5 1_555 C A 22 1_555 C A 8 1_555 C UFT 21 1_555 -3.861 -1.276 2.264 20.865 9.808 1.354 -1.553 6.165 -3.896
36.877 -78.450 23.094 4 BB_A5A8:UFT21A22_BB B 5 ? B 22 ? B 8 ? B 21 ?
1 C A 8 1_555 C UFT 21 1_555 C A 9 1_555 C UFT 20 1_555 -0.360 -0.773 2.981 -2.434 0.966 39.022 -1.261 0.272 2.978 1.444
3.639 39.106 5 BB_A8A9:UFT20UFT21_BB B 8 ? B 21 ? B 9 ? B 20 ?
1 C A 9 1_555 C UFT 20 1_555 C G 10 1_555 C CFL 19 1_555 1.305 -2.182 3.528 5.164 6.789 27.862 -5.882 -1.424 3.107
13.699 -10.419 29.114 6 BB_A9G10:CFL19UFT20_BB B 9 ? B 20 ? B 10 ? B 19 ?
1 C G 10 1_555 C CFL 19 1_555 C CFL 11 1_555 C G 16 1_555 1.090 -1.279 3.104 -1.399 -2.427 41.444 -1.557 -1.679 3.134
-3.425 1.974 41.534 7 BB_G10CFL11:G16CFL19_BB B 10 ? B 19 ? B 11 ? B 16 ?
1 C CFL 11 1_555 C G 16 1_555 C UFT 12 1_555 C A 15 1_555 3.338 -1.081 3.049 -1.170 13.818 -1.797 -12.779 12.253 1.740
-82.360 -6.975 -13.983 8 BB_CFL11UFT12:A15G16_BB B 11 ? B 16 ? B 12 ? B 15 ?
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1PPB
_pdbx_initial_refinement_model.details 'PDB ENTRY 1PPB'
#
_atom_sites.entry_id 3DD2
_atom_sites.fract_transf_matrix[1][1] 0.011938
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.007462
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.022710
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
F
MG
N
O
P
S
#
loop_