HEADER VIRAL PROTEIN, UNKNOWN FUNCTION 11-JUN-08 3DF6 TITLE THE THERMO- AND ACIDO-STABLE ORF-99 FROM THE ARCHAEAL VIRUS AFV1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORF99; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACIDIANUS FILAMENTOUS VIRUS 1; SOURCE 3 ORGANISM_TAXID: 235266; SOURCE 4 GENE: ORF99; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDEST17 KEYWDS ARCHAEAL VIRUS, EXTREMOPHILES, PROTEIN FOLD, LIPOTHRIXVIRIDAE, VIRAL KEYWDS 2 PROTEIN, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.GOULET,S.SPINELLI,D.PRANGISHVILI,H.VAN TILBEURGH,C.CAMBILLAU, AUTHOR 2 V.CAMPANACCI REVDAT 4 30-OCT-24 3DF6 1 REMARK REVDAT 3 10-NOV-21 3DF6 1 REMARK SEQADV LINK REVDAT 2 22-SEP-09 3DF6 1 TITLE REVDAT 1 16-JUN-09 3DF6 0 JRNL AUTH A.GOULET,S.SPINELLI,S.BLANGY,H.VAN TILBEURGH,N.LEULLIOT, JRNL AUTH 2 T.BASTA,D.PRANGISHVILI,C.CAMBILLAU,V.CAMPANACCI JRNL TITL THE THERMO- AND ACIDO-STABLE ORF-99 FROM THE ARCHAEAL VIRUS JRNL TITL 2 AFV1 JRNL REF PROTEIN SCI. V. 18 1316 2009 JRNL REFN ISSN 0961-8368 JRNL PMID 19472363 JRNL DOI 10.1002/PRO.122 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 35982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1156 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2632 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1910 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.2330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3284 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 368 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.167 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.184 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3447 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4669 ; 1.440 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 422 ; 8.958 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 193 ;29.740 ;25.855 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 662 ;12.346 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;15.002 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 505 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2648 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1520 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2369 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 368 ; 0.294 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 14 ; 0.113 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 80 ; 0.240 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 32 ; 0.176 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 6 ; 0.060 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2089 ; 1.177 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3288 ; 1.364 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1547 ; 2.378 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1364 ; 3.548 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3DF6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000047962. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37209 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : 0.09500 REMARK 200 FOR THE DATA SET : 25.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.10 REMARK 200 R MERGE FOR SHELL (I) : 0.39900 REMARK 200 R SYM FOR SHELL (I) : 0.39900 REMARK 200 FOR SHELL : 7.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 33% MPD, 0.2M CACL2, 0.1M HEPES, PH REMARK 280 6.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.55600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.83950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.84400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.83950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.55600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.84400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLY D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 29 CB - CA - C ANGL. DEV. = -13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 15 OD1 REMARK 620 2 HOH B 184 O 160.8 REMARK 620 3 HOH B 185 O 69.6 111.1 REMARK 620 4 HOH B 207 O 110.6 88.6 93.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 100 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 68 OD1 REMARK 620 2 HOH B 154 O 157.3 REMARK 620 3 HOH B 199 O 84.1 100.7 REMARK 620 4 HOH B 200 O 112.7 90.0 75.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 15 OD1 REMARK 620 2 HOH C 111 O 117.1 REMARK 620 3 HOH C 118 O 80.0 96.5 REMARK 620 4 HOH C 136 O 143.5 96.2 112.2 REMARK 620 5 HOH C 156 O 78.7 159.9 98.6 65.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 100 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN C 68 OD1 REMARK 620 2 HOH C 125 O 104.0 REMARK 620 3 HOH C 170 O 104.1 84.5 REMARK 620 4 HOH C 189 O 163.9 92.0 79.3 REMARK 620 5 HOH C 201 O 71.6 80.3 162.4 109.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 99 O REMARK 620 2 GLU C 99 OXT 48.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 102 DBREF 3DF6 A 2 99 UNP Q70LE8 Q70LE8_9VIRU 2 99 DBREF 3DF6 B 2 99 UNP Q70LE8 Q70LE8_9VIRU 2 99 DBREF 3DF6 C 2 99 UNP Q70LE8 Q70LE8_9VIRU 2 99 DBREF 3DF6 D 2 99 UNP Q70LE8 Q70LE8_9VIRU 2 99 SEQADV 3DF6 GLY A 1 UNP Q70LE8 EXPRESSION TAG SEQADV 3DF6 MSE A 27 UNP Q70LE8 LEU 27 ENGINEERED MUTATION SEQADV 3DF6 MSE A 70 UNP Q70LE8 ILE 70 ENGINEERED MUTATION SEQADV 3DF6 GLY B 1 UNP Q70LE8 EXPRESSION TAG SEQADV 3DF6 MSE B 27 UNP Q70LE8 LEU 27 ENGINEERED MUTATION SEQADV 3DF6 MSE B 70 UNP Q70LE8 ILE 70 ENGINEERED MUTATION SEQADV 3DF6 GLY C 1 UNP Q70LE8 EXPRESSION TAG SEQADV 3DF6 MSE C 27 UNP Q70LE8 LEU 27 ENGINEERED MUTATION SEQADV 3DF6 MSE C 70 UNP Q70LE8 ILE 70 ENGINEERED MUTATION SEQADV 3DF6 GLY D 1 UNP Q70LE8 EXPRESSION TAG SEQADV 3DF6 MSE D 27 UNP Q70LE8 LEU 27 ENGINEERED MUTATION SEQADV 3DF6 MSE D 70 UNP Q70LE8 ILE 70 ENGINEERED MUTATION SEQRES 1 A 99 GLY ASP THR HIS GLU PHE HIS LYS LEU LEU ILE LYS VAL SEQRES 2 A 99 VAL ASP LEU PHE LEU GLU ASP ARG ILE LYS GLU PHE GLU SEQRES 3 A 99 MSE LYS LEU ASN THR THR LEU ASP GLU LEU GLU PHE GLU SEQRES 4 A 99 GLU LEU ILE GLY LYS PRO ASP SER SER ASN SER ALA GLU SEQRES 5 A 99 ASN ASN GLY ILE PHE ILE ASP GLU TYR SER TYR ASP ALA SEQRES 6 A 99 SER GLU ASN ALA MSE LYS LYS LEU PHE VAL GLU TYR VAL SEQRES 7 A 99 ARG GLN PRO GLU PHE LYS TYR THR VAL LEU SER ILE LYS SEQRES 8 A 99 GLY VAL ASN ASP TRP VAL ARG GLU SEQRES 1 B 99 GLY ASP THR HIS GLU PHE HIS LYS LEU LEU ILE LYS VAL SEQRES 2 B 99 VAL ASP LEU PHE LEU GLU ASP ARG ILE LYS GLU PHE GLU SEQRES 3 B 99 MSE LYS LEU ASN THR THR LEU ASP GLU LEU GLU PHE GLU SEQRES 4 B 99 GLU LEU ILE GLY LYS PRO ASP SER SER ASN SER ALA GLU SEQRES 5 B 99 ASN ASN GLY ILE PHE ILE ASP GLU TYR SER TYR ASP ALA SEQRES 6 B 99 SER GLU ASN ALA MSE LYS LYS LEU PHE VAL GLU TYR VAL SEQRES 7 B 99 ARG GLN PRO GLU PHE LYS TYR THR VAL LEU SER ILE LYS SEQRES 8 B 99 GLY VAL ASN ASP TRP VAL ARG GLU SEQRES 1 C 99 GLY ASP THR HIS GLU PHE HIS LYS LEU LEU ILE LYS VAL SEQRES 2 C 99 VAL ASP LEU PHE LEU GLU ASP ARG ILE LYS GLU PHE GLU SEQRES 3 C 99 MSE LYS LEU ASN THR THR LEU ASP GLU LEU GLU PHE GLU SEQRES 4 C 99 GLU LEU ILE GLY LYS PRO ASP SER SER ASN SER ALA GLU SEQRES 5 C 99 ASN ASN GLY ILE PHE ILE ASP GLU TYR SER TYR ASP ALA SEQRES 6 C 99 SER GLU ASN ALA MSE LYS LYS LEU PHE VAL GLU TYR VAL SEQRES 7 C 99 ARG GLN PRO GLU PHE LYS TYR THR VAL LEU SER ILE LYS SEQRES 8 C 99 GLY VAL ASN ASP TRP VAL ARG GLU SEQRES 1 D 99 GLY ASP THR HIS GLU PHE HIS LYS LEU LEU ILE LYS VAL SEQRES 2 D 99 VAL ASP LEU PHE LEU GLU ASP ARG ILE LYS GLU PHE GLU SEQRES 3 D 99 MSE LYS LEU ASN THR THR LEU ASP GLU LEU GLU PHE GLU SEQRES 4 D 99 GLU LEU ILE GLY LYS PRO ASP SER SER ASN SER ALA GLU SEQRES 5 D 99 ASN ASN GLY ILE PHE ILE ASP GLU TYR SER TYR ASP ALA SEQRES 6 D 99 SER GLU ASN ALA MSE LYS LYS LEU PHE VAL GLU TYR VAL SEQRES 7 D 99 ARG GLN PRO GLU PHE LYS TYR THR VAL LEU SER ILE LYS SEQRES 8 D 99 GLY VAL ASN ASP TRP VAL ARG GLU MODRES 3DF6 MSE A 27 MET SELENOMETHIONINE MODRES 3DF6 MSE A 70 MET SELENOMETHIONINE MODRES 3DF6 MSE B 27 MET SELENOMETHIONINE MODRES 3DF6 MSE B 70 MET SELENOMETHIONINE MODRES 3DF6 MSE C 27 MET SELENOMETHIONINE MODRES 3DF6 MSE C 70 MET SELENOMETHIONINE MODRES 3DF6 MSE D 27 MET SELENOMETHIONINE MODRES 3DF6 MSE D 70 MET SELENOMETHIONINE HET MSE A 27 8 HET MSE A 70 8 HET MSE B 27 8 HET MSE B 70 8 HET MSE C 27 8 HET MSE C 70 8 HET MSE D 27 8 HET MSE D 70 8 HET CA A 100 1 HET CA B 100 1 HET CA B 101 1 HET CA C 100 1 HET CA C 101 1 HET CA C 102 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 5 CA 6(CA 2+) FORMUL 11 HOH *368(H2 O) HELIX 1 1 ASP A 2 GLU A 19 1 18 HELIX 2 2 ASP A 34 GLY A 43 1 10 HELIX 3 3 GLY B 1 GLU B 19 1 19 HELIX 4 4 GLU B 35 GLY B 43 1 9 HELIX 5 5 ASP C 2 GLU C 19 1 18 HELIX 6 6 GLU C 35 GLY C 43 1 9 HELIX 7 7 ASP D 2 GLU D 19 1 18 HELIX 8 8 ASP D 34 GLY D 43 1 10 SHEET 1 A20 SER A 47 ASN A 53 0 SHEET 2 A20 ILE A 56 ASP A 64 -1 O SER A 62 N SER A 47 SHEET 3 A20 ALA A 69 GLN A 80 -1 O TYR A 77 N PHE A 57 SHEET 4 A20 LYS A 84 TRP A 96 -1 O LYS A 91 N PHE A 74 SHEET 5 A20 ILE A 22 LEU A 33 -1 N THR A 31 O VAL A 87 SHEET 6 A20 ILE C 22 ASP C 34 -1 O LYS C 28 N GLU A 24 SHEET 7 A20 LYS C 84 TRP C 96 -1 O TYR C 85 N LEU C 33 SHEET 8 A20 ALA C 69 GLN C 80 -1 N GLN C 80 O LYS C 84 SHEET 9 A20 ILE C 56 ASP C 64 -1 N PHE C 57 O TYR C 77 SHEET 10 A20 SER C 47 ASN C 53 -1 N ASN C 53 O ILE C 56 SHEET 11 A20 SER B 47 ASN B 53 -1 N SER B 48 O SER C 48 SHEET 12 A20 ILE B 56 ASP B 64 -1 O ILE B 56 N ASN B 53 SHEET 13 A20 ALA B 69 GLN B 80 -1 O TYR B 77 N PHE B 57 SHEET 14 A20 LYS B 84 TRP B 96 -1 O LYS B 84 N GLN B 80 SHEET 15 A20 ILE B 22 ASP B 34 -1 N PHE B 25 O GLY B 92 SHEET 16 A20 ILE D 22 LEU D 33 -1 O LYS D 28 N GLU B 24 SHEET 17 A20 LYS D 84 TRP D 96 -1 O VAL D 87 N THR D 31 SHEET 18 A20 ALA D 69 GLN D 80 -1 N GLN D 80 O LYS D 84 SHEET 19 A20 ILE D 56 ASP D 64 -1 N PHE D 57 O TYR D 77 SHEET 20 A20 SER D 47 ASN D 53 -1 N SER D 47 O SER D 62 LINK C GLU A 26 N MSE A 27 1555 1555 1.33 LINK C MSE A 27 N LYS A 28 1555 1555 1.33 LINK C ALA A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N LYS A 71 1555 1555 1.32 LINK C GLU B 26 N MSE B 27 1555 1555 1.33 LINK C MSE B 27 N LYS B 28 1555 1555 1.33 LINK C ALA B 69 N MSE B 70 1555 1555 1.32 LINK C MSE B 70 N LYS B 71 1555 1555 1.34 LINK C GLU C 26 N MSE C 27 1555 1555 1.32 LINK C MSE C 27 N LYS C 28 1555 1555 1.32 LINK C ALA C 69 N MSE C 70 1555 1555 1.32 LINK C MSE C 70 N LYS C 71 1555 1555 1.32 LINK C GLU D 26 N MSE D 27 1555 1555 1.33 LINK C MSE D 27 N LYS D 28 1555 1555 1.32 LINK C ALA D 69 N MSE D 70 1555 1555 1.33 LINK C MSE D 70 N LYS D 71 1555 1555 1.32 LINK O GLU A 99 CA CA A 100 1555 1555 2.41 LINK OD1 ASP B 15 CA CA B 101 1555 1555 2.41 LINK OD1 ASN B 68 CA CA B 100 1555 1555 2.36 LINK CA CA B 100 O HOH B 154 1555 1555 2.31 LINK CA CA B 100 O HOH B 199 1555 1555 2.19 LINK CA CA B 100 O HOH B 200 1555 1555 2.39 LINK CA CA B 101 O HOH B 184 1555 1555 2.28 LINK CA CA B 101 O HOH B 185 1555 1555 2.33 LINK CA CA B 101 O HOH B 207 1555 1555 2.60 LINK OD1 ASP C 15 CA CA C 102 1555 1555 2.29 LINK OD1 ASN C 68 CA CA C 100 1555 1555 2.37 LINK O GLU C 99 CA CA C 101 1555 1555 2.50 LINK OXT GLU C 99 CA CA C 101 1555 1555 2.67 LINK CA CA C 100 O HOH C 125 1555 1555 2.62 LINK CA CA C 100 O HOH C 170 1555 1555 2.52 LINK CA CA C 100 O HOH C 189 1555 1555 2.34 LINK CA CA C 100 O HOH C 201 1555 1555 2.27 LINK CA CA C 102 O HOH C 111 1555 1555 2.50 LINK CA CA C 102 O HOH C 118 1555 1555 2.45 LINK CA CA C 102 O HOH C 136 1555 1555 2.38 LINK CA CA C 102 O HOH C 156 1555 1555 2.64 SITE 1 AC1 6 GLU A 99 ASN B 53 ASN B 54 GLU B 99 SITE 2 AC1 6 HOH B 102 HOH B 144 SITE 1 AC2 6 ASP A 95 HOH A 158 ASN B 68 HOH B 154 SITE 2 AC2 6 HOH B 199 HOH B 200 SITE 1 AC3 5 ASP B 15 GLU B 40 HOH B 184 HOH B 185 SITE 2 AC3 5 HOH B 207 SITE 1 AC4 7 ASN C 68 GLU C 99 HOH C 125 HOH C 170 SITE 2 AC4 7 HOH C 189 HOH C 201 ASP D 95 SITE 1 AC5 6 ASN C 53 ASN C 54 GLU C 99 HOH C 137 SITE 2 AC5 6 HOH C 143 GLU D 99 SITE 1 AC6 6 ASP C 15 GLU C 40 HOH C 111 HOH C 118 SITE 2 AC6 6 HOH C 136 HOH C 156 CRYST1 57.112 97.688 103.679 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017510 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010237 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009645 0.00000