HEADER ISOMERASE 13-JUN-08 3DGB TITLE CRYSTAL STRUCTURE OF MUCONATE LACTONIZING ENZYME FROM PSEUDOMONAS TITLE 2 FLUORESCENS COMPLEXED WITH MUCONOLACTONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUCONATE CYCLOISOMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.5.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 220664; SOURCE 4 STRAIN: PF-5; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MUCONATE LACTONIZING ENZYME, MUCONOLACTONE BINDING, ISOMERASE, KEYWDS 2 STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NEW YORK KEYWDS 3 SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR A.A.FEDOROV,E.V.FEDOROV,J.M.SAUDER,S.K.BURLEY,J.A.GERLT,S.C.ALMO,NEW AUTHOR 2 YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 5 20-MAR-24 3DGB 1 REMARK REVDAT 4 03-FEB-21 3DGB 1 AUTHOR JRNL REMARK SEQADV REVDAT 4 2 1 LINK REVDAT 3 13-JUL-11 3DGB 1 VERSN REVDAT 2 31-MAR-09 3DGB 1 KEYWDS AUTHOR REMARK REVDAT 1 03-MAR-09 3DGB 0 JRNL AUTH A.SAKAI,A.A.FEDOROV,E.V.FEDOROV,A.M.SCHNOES,M.E.GLASNER, JRNL AUTH 2 S.BROWN,M.E.RUTTER,K.BAIN,S.CHANG,T.GHEYI,J.M.SAUDER, JRNL AUTH 3 S.K.BURLEY,P.C.BABBITT,S.C.ALMO,J.A.GERLT JRNL TITL EVOLUTION OF ENZYMATIC ACTIVITIES IN THE ENOLASE JRNL TITL 2 SUPERFAMILY: STEREOCHEMICALLY DISTINCT MECHANISMS IN TWO JRNL TITL 3 FAMILIES OF CIS,CIS-MUCONATE LACTONIZING ENZYMES JRNL REF BIOCHEMISTRY V. 48 1445 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19220063 JRNL DOI 10.1021/BI802277H REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3201934.340 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 51329 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2607 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4637 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 253 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2786 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.07000 REMARK 3 B22 (A**2) : 1.07000 REMARK 3 B33 (A**2) : -2.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.11 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.14 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.020 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.510 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.970 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.840 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 56.51 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : MCL_PAR.TXT REMARK 3 PARAMETER FILE 5 : &_1_PARAMETER_INFILE_5 REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : &_1_TOPOLOGY_INFILE_4 REMARK 3 TOPOLOGY FILE 5 : &_1_TOPOLOGY_INFILE_5 REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3DGB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000048002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51329 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M AMMONIUM SULFATE, 5% ISO REMARK 280 -PROPANOL, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 66.92100 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 66.92100 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 51.68550 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 66.92100 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 66.92100 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 51.68550 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 66.92100 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 66.92100 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 51.68550 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 66.92100 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 66.92100 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 51.68550 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 66.92100 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 66.92100 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 51.68550 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 66.92100 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 66.92100 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 51.68550 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 66.92100 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 66.92100 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 51.68550 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 66.92100 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 66.92100 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 51.68550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 23340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 87700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 133.84200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 133.84200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 133.84200 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 133.84200 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 133.84200 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 133.84200 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 133.84200 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 133.84200 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 133.84200 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 GLU A 375 REMARK 465 GLY A 376 REMARK 465 HIS A 377 REMARK 465 HIS A 378 REMARK 465 HIS A 379 REMARK 465 HIS A 380 REMARK 465 HIS A 381 REMARK 465 HIS A 382 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 33 -170.95 -171.96 REMARK 500 ALA A 145 43.10 -153.62 REMARK 500 GLN A 227 68.00 30.70 REMARK 500 ASP A 251 -79.47 -130.15 REMARK 500 ASP A 327 -153.09 66.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A2001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 200 OD2 REMARK 620 2 GLU A 226 OE2 84.3 REMARK 620 3 ASP A 251 OD2 166.9 85.7 REMARK 620 4 MUC A1001 O1 100.2 136.4 81.5 REMARK 620 5 HOH A2237 O 90.6 101.9 99.6 121.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MUC A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CT2 RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITHOUT LIGAND REMARK 900 RELATED ID: 3FJ4 RELATED DB: PDB REMARK 900 THE SAME PROTEIN, WITH THE SAME LIGAND BUT CRYSTALLIZED IN REMARK 900 DIFFERENT SPACE GROUPS REMARK 900 RELATED ID: NYSGXRC-9450F RELATED DB: TARGETDB DBREF 3DGB A 4 374 UNP Q4K9X1 Q4K9X1_PSEF5 2 372 SEQADV 3DGB MET A 1 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB SER A 2 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB LEU A 3 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB GLU A 375 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB GLY A 376 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB HIS A 377 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB HIS A 378 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB HIS A 379 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB HIS A 380 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB HIS A 381 UNP Q4K9X1 EXPRESSION TAG SEQADV 3DGB HIS A 382 UNP Q4K9X1 EXPRESSION TAG SEQRES 1 A 382 MET SER LEU HIS ALA SER ALA ILE GLU SER ILE GLU THR SEQRES 2 A 382 ILE ILE VAL ASP LEU PRO THR ILE ARG PRO HIS LYS LEU SEQRES 3 A 382 ALA MET HIS THR MET GLN ASN GLN THR LEU VAL LEU ILE SEQRES 4 A 382 ARG LEU ARG CYS ALA ASP GLY ILE GLU GLY LEU GLY GLU SEQRES 5 A 382 SER THR THR ILE GLY GLY LEU ALA TYR GLY ASN GLU SER SEQRES 6 A 382 PRO ASP SER ILE LYS THR ASN ILE ASP ARG PHE VAL ALA SEQRES 7 A 382 PRO LEU LEU ILE GLY GLN ASP ALA SER ASN ILE ASN ALA SEQRES 8 A 382 ALA MET LEU ARG LEU GLU GLN SER ILE ARG GLY ASN THR SEQRES 9 A 382 PHE ALA LYS SER GLY ILE GLU SER ALA LEU LEU ASP ALA SEQRES 10 A 382 GLN GLY LYS ARG LEU GLY LEU PRO VAL SER GLU LEU LEU SEQRES 11 A 382 GLY GLY ARG VAL ARG ASP ALA LEU PRO VAL ALA TRP THR SEQRES 12 A 382 LEU ALA SER GLY ASP THR ALA LYS ASP ILE ALA GLU ALA SEQRES 13 A 382 GLN LYS MET LEU ASP LEU ARG ARG HIS ARG ILE PHE LYS SEQRES 14 A 382 LEU LYS ILE GLY ALA GLY GLU VAL ASP ARG ASP LEU ALA SEQRES 15 A 382 HIS VAL ILE ALA ILE LYS LYS ALA LEU GLY ASP SER ALA SEQRES 16 A 382 SER VAL ARG VAL ASP VAL ASN GLN ALA TRP ASP GLU ALA SEQRES 17 A 382 VAL ALA LEU ARG ALA CYS ARG ILE LEU GLY GLY ASN GLY SEQRES 18 A 382 ILE ASP LEU ILE GLU GLN PRO ILE SER ARG ASN ASN ARG SEQRES 19 A 382 ALA GLY MET VAL ARG LEU ASN ALA SER SER PRO ALA PRO SEQRES 20 A 382 ILE MET ALA ASP GLU SER ILE GLU CYS VAL GLU ASP ALA SEQRES 21 A 382 PHE ASN LEU ALA ARG GLU GLY ALA ALA SER VAL PHE ALA SEQRES 22 A 382 LEU LYS ILE ALA LYS ASN GLY GLY PRO ARG ALA THR LEU SEQRES 23 A 382 ARG THR ALA ALA ILE ALA GLU ALA ALA GLY ILE GLY LEU SEQRES 24 A 382 TYR GLY GLY THR MET LEU GLU GLY GLY ILE GLY THR LEU SEQRES 25 A 382 ALA SER ALA HIS ALA PHE LEU THR LEU ASN LYS LEU SER SEQRES 26 A 382 TRP ASP THR GLU LEU PHE GLY PRO LEU LEU LEU THR GLU SEQRES 27 A 382 ASP ILE LEU ALA GLU PRO PRO VAL TYR ARG ASP PHE HIS SEQRES 28 A 382 LEU HIS VAL SER LYS ALA PRO GLY LEU GLY LEU SER LEU SEQRES 29 A 382 ASP GLU GLU ARG LEU ALA PHE PHE ARG ARG GLU GLY HIS SEQRES 30 A 382 HIS HIS HIS HIS HIS HET MG A2001 1 HET MUC A1001 10 HETNAM MG MAGNESIUM ION HETNAM MUC [(2S)-5-OXO-2,5-DIHYDROFURAN-2-YL]ACETIC ACID HETSYN MUC MUCONOLACTONE FORMUL 2 MG MG 2+ FORMUL 3 MUC C6 H6 O4 FORMUL 4 HOH *236(H2 O) HELIX 1 1 SER A 65 PHE A 76 1 12 HELIX 2 2 PHE A 76 ILE A 82 1 7 HELIX 3 3 ASN A 88 ILE A 100 1 13 HELIX 4 4 ASN A 103 GLY A 123 1 21 HELIX 5 5 PRO A 125 LEU A 130 1 6 HELIX 6 6 ASP A 148 LEU A 162 1 15 HELIX 7 7 GLU A 176 GLY A 192 1 17 HELIX 8 8 ASP A 193 ALA A 195 5 3 HELIX 9 9 ASP A 206 GLY A 219 1 14 HELIX 10 10 ASN A 233 SER A 244 1 12 HELIX 11 11 CYS A 256 GLY A 267 1 12 HELIX 12 12 LYS A 275 GLY A 280 1 6 HELIX 13 13 GLY A 281 ALA A 295 1 15 HELIX 14 14 GLY A 307 LEU A 319 1 13 HELIX 15 15 PHE A 331 LEU A 336 1 6 HELIX 16 16 ASP A 365 ARG A 373 1 9 SHEET 1 A 3 ILE A 8 LYS A 25 0 SHEET 2 A 3 THR A 30 CYS A 43 -1 O MET A 31 N HIS A 24 SHEET 3 A 3 GLU A 48 THR A 54 -1 O GLY A 49 N LEU A 41 SHEET 1 B 3 ALA A 137 PRO A 139 0 SHEET 2 B 3 HIS A 351 HIS A 353 -1 O LEU A 352 N LEU A 138 SHEET 3 B 3 VAL A 346 ARG A 348 -1 N VAL A 346 O HIS A 353 SHEET 1 C 7 TRP A 142 LEU A 144 0 SHEET 2 C 7 ILE A 167 LYS A 171 1 O LYS A 169 N LEU A 144 SHEET 3 C 7 SER A 196 ASP A 200 1 O SER A 196 N PHE A 168 SHEET 4 C 7 ILE A 225 GLU A 226 1 O GLU A 226 N VAL A 199 SHEET 5 C 7 ILE A 248 ALA A 250 1 O MET A 249 N ILE A 225 SHEET 6 C 7 VAL A 271 LEU A 274 1 O ALA A 273 N ALA A 250 SHEET 7 C 7 GLY A 298 GLY A 301 1 O TYR A 300 N LEU A 274 LINK OD2 ASP A 200 MG MG A2001 1555 1555 2.34 LINK OE2 GLU A 226 MG MG A2001 1555 1555 2.33 LINK OD2 ASP A 251 MG MG A2001 1555 1555 2.24 LINK O1 MUC A1001 MG MG A2001 1555 1555 2.42 LINK MG MG A2001 O HOH A2237 1555 1555 1.79 SITE 1 AC1 6 ASP A 200 ASN A 202 GLU A 226 ASP A 251 SITE 2 AC1 6 GLU A 252 HOH A2237 SITE 1 AC2 13 HIS A 24 ILE A 56 TYR A 61 THR A 143 SITE 2 AC2 13 LYS A 169 LYS A 171 ASP A 200 ASN A 202 SITE 3 AC2 13 ASP A 251 LYS A 275 THR A 303 GLU A 329 SITE 4 AC2 13 PHE A 331 CRYST1 133.842 133.842 103.371 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007471 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007471 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009674 0.00000