data_3DH2 # _entry.id 3DH2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DH2 pdb_00003dh2 10.2210/pdb3dh2/pdb RCSB RCSB048029 ? ? WWPDB D_1000048029 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1py3 'Structure of ribonuclease Sa2 without ligand' unspecified PDB 1pyl 'Structure of ribonuclease Sa2 without ligand' unspecified PDB 3d4a ;Structure of ribonuclease Sa2 with 3'-GMP ; unspecified PDB 3d5i ;Crystal structure of ribonuclease Sa2 with exo-2',3'-cyclophosphorotioate ; unspecified PDB 1gmp ;Structure of ribonuclease Sa with 2'-GMP ; unspecified PDB 3dgy ;Structure of ribonuclease Sa2 with 2'-GMP ; unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DH2 _pdbx_database_status.recvd_initial_deposition_date 2008-06-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sevcik, J.' 1 'Bauerova-Hlinkova, V.' 2 # _citation.id primary _citation.title 'Structure of RNase Sa2 complexes with mononucleotides - new aspects of catalytic reaction and substrate recognition' _citation.journal_abbrev 'Febs J.' _citation.journal_volume 276 _citation.page_first 4156 _citation.page_last 4168 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19558492 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2009.07125.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bauerova-Hlinkova, V.' 1 ? primary 'Dvorsky, R.' 2 ? primary 'Perecko, D.' 3 ? primary 'Povazanec, F.' 4 ? primary 'Sevcik, J.' 5 ? # _cell.entry_id 3DH2 _cell.length_a 108.192 _cell.length_b 62.648 _cell.length_c 68.299 _cell.angle_alpha 90.00 _cell.angle_beta 129.18 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DH2 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Ribonuclease 10909.012 4 3.1.4.8 ? ? ? 2 non-polymer man beta-D-glucopyranose 180.156 3 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 non-polymer syn "GUANOSINE-3'-MONOPHOSPHATE" 363.221 4 ? ? ? ? 5 water nat water 18.015 125 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ribonuclease Sa2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADPALADVCRTKLPSQAQDTLALIAKNGPYPYNRDGVVFENRESRLPKKGNGYYHEFTVVTPGSNDRGTRRVVTGGYGEQ YWSPDHYATFQEIDPRC ; _entity_poly.pdbx_seq_one_letter_code_can ;ADPALADVCRTKLPSQAQDTLALIAKNGPYPYNRDGVVFENRESRLPKKGNGYYHEFTVVTPGSNDRGTRRVVTGGYGEQ YWSPDHYATFQEIDPRC ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 PRO n 1 4 ALA n 1 5 LEU n 1 6 ALA n 1 7 ASP n 1 8 VAL n 1 9 CYS n 1 10 ARG n 1 11 THR n 1 12 LYS n 1 13 LEU n 1 14 PRO n 1 15 SER n 1 16 GLN n 1 17 ALA n 1 18 GLN n 1 19 ASP n 1 20 THR n 1 21 LEU n 1 22 ALA n 1 23 LEU n 1 24 ILE n 1 25 ALA n 1 26 LYS n 1 27 ASN n 1 28 GLY n 1 29 PRO n 1 30 TYR n 1 31 PRO n 1 32 TYR n 1 33 ASN n 1 34 ARG n 1 35 ASP n 1 36 GLY n 1 37 VAL n 1 38 VAL n 1 39 PHE n 1 40 GLU n 1 41 ASN n 1 42 ARG n 1 43 GLU n 1 44 SER n 1 45 ARG n 1 46 LEU n 1 47 PRO n 1 48 LYS n 1 49 LYS n 1 50 GLY n 1 51 ASN n 1 52 GLY n 1 53 TYR n 1 54 TYR n 1 55 HIS n 1 56 GLU n 1 57 PHE n 1 58 THR n 1 59 VAL n 1 60 VAL n 1 61 THR n 1 62 PRO n 1 63 GLY n 1 64 SER n 1 65 ASN n 1 66 ASP n 1 67 ARG n 1 68 GLY n 1 69 THR n 1 70 ARG n 1 71 ARG n 1 72 VAL n 1 73 VAL n 1 74 THR n 1 75 GLY n 1 76 GLY n 1 77 TYR n 1 78 GLY n 1 79 GLU n 1 80 GLN n 1 81 TYR n 1 82 TRP n 1 83 SER n 1 84 PRO n 1 85 ASP n 1 86 HIS n 1 87 TYR n 1 88 ALA n 1 89 THR n 1 90 PHE n 1 91 GLN n 1 92 GLU n 1 93 ILE n 1 94 ASP n 1 95 PRO n 1 96 ARG n 1 97 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain R8/26 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces aureofaciens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1894 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Nova Blue' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pEH200 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q53752_STRAU _struct_ref.pdbx_db_accession Q53752 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADPALADVCRTKLPSQAQDTLALIAKNGPYPYNRDGVVFENRESRLPKKGNGYYHEFTVVTPGSNDRGTRRVVTGGYGEQ YWSPDHYATFQEIDPRC ; _struct_ref.pdbx_align_begin 67 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DH2 A 1 ? 97 ? Q53752 67 ? 163 ? 1 97 2 1 3DH2 B 1 ? 97 ? Q53752 67 ? 163 ? 1 97 3 1 3DH2 C 1 ? 97 ? Q53752 67 ? 163 ? 1 97 4 1 3DH2 D 1 ? 97 ? Q53752 67 ? 163 ? 1 97 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3GP non-polymer . "GUANOSINE-3'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3DH2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_percent_sol 40.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_details '2.2 M ammonium sulfate, phosphate buffer pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2001-11-16 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X31' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X31 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1 # _reflns.entry_id 3DH2 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.25 _reflns.d_resolution_low 20.0 _reflns.number_all 16870 _reflns.number_obs 16347 _reflns.percent_possible_obs 96.9 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.25 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 75 _reflns_shell.Rmerge_I_obs 0.325 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 2.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 491 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DH2 _refine.ls_number_reflns_obs 15526 _refine.ls_number_reflns_all 15526 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 2.25 _refine.ls_percent_reflns_obs 96.40 _refine.ls_R_factor_obs 0.20167 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19855 _refine.ls_R_factor_R_free 0.25921 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 821 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.907 _refine.B_iso_mean 9.666 _refine.aniso_B[1][1] 1.94 _refine.aniso_B[2][2] -0.05 _refine.aniso_B[3][3] -0.06 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 1.45 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1py3 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.556 _refine.pdbx_overall_ESU_R_Free 0.277 _refine.overall_SU_ML 0.214 _refine.overall_SU_B 16.915 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3030 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 137 _refine_hist.number_atoms_solvent 125 _refine_hist.number_atoms_total 3292 _refine_hist.d_res_high 2.25 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.021 ? 3284 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.604 2.001 ? 4491 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.496 5.000 ? 378 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.940 23.140 ? 172 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.149 15.000 ? 473 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.946 15.000 ? 33 'X-RAY DIFFRACTION' ? r_chiral_restr 0.106 0.200 ? 460 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2601 'X-RAY DIFFRACTION' ? r_nbd_refined 0.223 0.200 ? 1512 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.305 0.200 ? 2174 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.192 0.200 ? 214 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.287 0.200 ? 119 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.141 0.200 ? 10 'X-RAY DIFFRACTION' ? r_mcbond_it 0.575 1.500 ? 1923 'X-RAY DIFFRACTION' ? r_mcangle_it 0.952 2.000 ? 3068 'X-RAY DIFFRACTION' ? r_scbond_it 1.349 3.000 ? 1582 'X-RAY DIFFRACTION' ? r_scangle_it 2.164 4.500 ? 1422 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.250 _refine_ls_shell.d_res_low 2.308 _refine_ls_shell.number_reflns_R_work 937 _refine_ls_shell.R_factor_R_work 0.264 _refine_ls_shell.percent_reflns_obs 77.60 _refine_ls_shell.R_factor_R_free 0.372 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 54 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 491 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DH2 _struct.title ;Crystal structure of ribonuclease Sa2 with guanosine-3'-cyclophosphate prepared by cocrystallization ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DH2 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;ribonuclease, hydrolase, protein-mononucleotide complex, guanosine-3'-monophosphate, mononucleotide, cocrystallization ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 2 ? I N N 4 ? J N N 2 ? K N N 4 ? L N N 4 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 11 ? LEU A 13 ? THR A 11 LEU A 13 5 ? 3 HELX_P HELX_P2 2 PRO A 14 ? LYS A 26 ? PRO A 14 LYS A 26 1 ? 13 HELX_P HELX_P3 3 THR B 11 ? LEU B 13 ? THR B 11 LEU B 13 5 ? 3 HELX_P HELX_P4 4 PRO B 14 ? LYS B 26 ? PRO B 14 LYS B 26 1 ? 13 HELX_P HELX_P5 5 THR C 11 ? LEU C 13 ? THR C 11 LEU C 13 5 ? 3 HELX_P HELX_P6 6 PRO C 14 ? ASN C 27 ? PRO C 14 ASN C 27 1 ? 14 HELX_P HELX_P7 7 THR D 11 ? LEU D 13 ? THR D 11 LEU D 13 5 ? 3 HELX_P HELX_P8 8 PRO D 14 ? LYS D 26 ? PRO D 14 LYS D 26 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 9 A CYS 97 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf2 disulf ? ? B CYS 9 SG ? ? ? 1_555 B CYS 97 SG ? ? B CYS 9 B CYS 97 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf3 disulf ? ? C CYS 9 SG ? ? ? 1_555 C CYS 97 SG ? ? C CYS 9 C CYS 97 1_555 ? ? ? ? ? ? ? 2.019 ? ? disulf4 disulf ? ? D CYS 9 SG ? ? ? 1_555 D CYS 97 SG ? ? D CYS 9 D CYS 97 1_555 ? ? ? ? ? ? ? 2.018 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 28 A . ? GLY 28 A PRO 29 A ? PRO 29 A 1 -0.30 2 GLY 28 B . ? GLY 28 B PRO 29 B ? PRO 29 B 1 -0.81 3 GLY 28 C . ? GLY 28 C PRO 29 C ? PRO 29 C 1 0.63 4 GLY 28 D . ? GLY 28 D PRO 29 D ? PRO 29 D 1 5.17 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 6 ? D ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 6 ? CYS A 9 ? ALA A 6 CYS A 9 A 2 GLN A 91 ? ASP A 94 ? GLN A 91 ASP A 94 A 3 GLN A 80 ? SER A 83 ? GLN A 80 SER A 83 A 4 ARG A 71 ? THR A 74 ? ARG A 71 THR A 74 A 5 TYR A 54 ? THR A 58 ? TYR A 54 THR A 58 A 6 VAL A 37 ? PHE A 39 ? VAL A 37 PHE A 39 B 1 ALA B 6 ? CYS B 9 ? ALA B 6 CYS B 9 B 2 GLN B 91 ? ASP B 94 ? GLN B 91 ASP B 94 B 3 GLN B 80 ? SER B 83 ? GLN B 80 SER B 83 B 4 ARG B 70 ? THR B 74 ? ARG B 70 THR B 74 B 5 HIS B 55 ? VAL B 59 ? HIS B 55 VAL B 59 C 1 ALA C 6 ? CYS C 9 ? ALA C 6 CYS C 9 C 2 GLN C 91 ? ASP C 94 ? GLN C 91 ASP C 94 C 3 GLN C 80 ? SER C 83 ? GLN C 80 SER C 83 C 4 ARG C 71 ? THR C 74 ? ARG C 71 THR C 74 C 5 HIS C 55 ? THR C 58 ? HIS C 55 THR C 58 C 6 VAL C 37 ? VAL C 38 ? VAL C 37 VAL C 38 D 1 ALA D 6 ? CYS D 9 ? ALA D 6 CYS D 9 D 2 GLN D 91 ? ASP D 94 ? GLN D 91 ASP D 94 D 3 GLN D 80 ? SER D 83 ? GLN D 80 SER D 83 D 4 ARG D 71 ? THR D 74 ? ARG D 71 THR D 74 D 5 HIS D 55 ? THR D 58 ? HIS D 55 THR D 58 D 6 VAL D 37 ? VAL D 38 ? VAL D 37 VAL D 38 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 8 ? N VAL A 8 O ASP A 94 ? O ASP A 94 A 2 3 O GLN A 91 ? O GLN A 91 N TRP A 82 ? N TRP A 82 A 3 4 O TYR A 81 ? O TYR A 81 N VAL A 73 ? N VAL A 73 A 4 5 O THR A 74 ? O THR A 74 N HIS A 55 ? N HIS A 55 A 5 6 O GLU A 56 ? O GLU A 56 N VAL A 37 ? N VAL A 37 B 1 2 N VAL B 8 ? N VAL B 8 O ASP B 94 ? O ASP B 94 B 2 3 O ILE B 93 ? O ILE B 93 N GLN B 80 ? N GLN B 80 B 3 4 O TYR B 81 ? O TYR B 81 N VAL B 73 ? N VAL B 73 B 4 5 O ARG B 70 ? O ARG B 70 N VAL B 59 ? N VAL B 59 C 1 2 N ALA C 6 ? N ALA C 6 O GLU C 92 ? O GLU C 92 C 2 3 O GLN C 91 ? O GLN C 91 N TRP C 82 ? N TRP C 82 C 3 4 O TYR C 81 ? O TYR C 81 N VAL C 73 ? N VAL C 73 C 4 5 O VAL C 72 ? O VAL C 72 N PHE C 57 ? N PHE C 57 C 5 6 O GLU C 56 ? O GLU C 56 N VAL C 37 ? N VAL C 37 D 1 2 N ALA D 6 ? N ALA D 6 O GLU D 92 ? O GLU D 92 D 2 3 O GLN D 91 ? O GLN D 91 N TRP D 82 ? N TRP D 82 D 3 4 O TYR D 81 ? O TYR D 81 N VAL D 73 ? N VAL D 73 D 4 5 O VAL D 72 ? O VAL D 72 N PHE D 57 ? N PHE D 57 D 5 6 O GLU D 56 ? O GLU D 56 N VAL D 37 ? N VAL D 37 # _database_PDB_matrix.entry_id 3DH2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DH2 _atom_sites.fract_transf_matrix[1][1] 0.009243 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007532 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015962 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018888 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 ASP 2 2 ? ? ? A . n A 1 3 PRO 3 3 ? ? ? A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 HIS 55 55 55 HIS HIS A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 PHE 57 57 57 PHE PHE A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 TRP 82 82 82 TRP TRP A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 CYS 97 97 97 CYS CYS A . n B 1 1 ALA 1 1 ? ? ? B . n B 1 2 ASP 2 2 ? ? ? B . n B 1 3 PRO 3 3 ? ? ? B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 ASP 7 7 7 ASP ASP B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 CYS 9 9 9 CYS CYS B . n B 1 10 ARG 10 10 10 ARG ARG B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 LYS 12 12 12 LYS LYS B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 PRO 14 14 14 PRO PRO B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 GLN 16 16 16 GLN GLN B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 THR 20 20 20 THR THR B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 ILE 24 24 24 ILE ILE B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 PRO 29 29 29 PRO PRO B . n B 1 30 TYR 30 30 30 TYR TYR B . n B 1 31 PRO 31 31 31 PRO PRO B . n B 1 32 TYR 32 32 32 TYR TYR B . n B 1 33 ASN 33 33 33 ASN ASN B . n B 1 34 ARG 34 34 34 ARG ARG B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 VAL 37 37 37 VAL VAL B . n B 1 38 VAL 38 38 38 VAL VAL B . n B 1 39 PHE 39 39 39 PHE PHE B . n B 1 40 GLU 40 40 40 GLU GLU B . n B 1 41 ASN 41 41 41 ASN ASN B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 SER 44 44 44 SER SER B . n B 1 45 ARG 45 45 45 ARG ARG B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 LYS 49 49 49 LYS LYS B . n B 1 50 GLY 50 50 50 GLY GLY B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 TYR 53 53 53 TYR TYR B . n B 1 54 TYR 54 54 54 TYR TYR B . n B 1 55 HIS 55 55 55 HIS HIS B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 PHE 57 57 57 PHE PHE B . n B 1 58 THR 58 58 58 THR THR B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 VAL 60 60 60 VAL VAL B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 PRO 62 62 62 PRO PRO B . n B 1 63 GLY 63 63 63 GLY GLY B . n B 1 64 SER 64 64 64 SER SER B . n B 1 65 ASN 65 65 65 ASN ASN B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 ARG 67 67 67 ARG ARG B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 ARG 70 70 70 ARG ARG B . n B 1 71 ARG 71 71 71 ARG ARG B . n B 1 72 VAL 72 72 72 VAL VAL B . n B 1 73 VAL 73 73 73 VAL VAL B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 GLY 75 75 75 GLY GLY B . n B 1 76 GLY 76 76 76 GLY GLY B . n B 1 77 TYR 77 77 77 TYR TYR B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 GLU 79 79 79 GLU GLU B . n B 1 80 GLN 80 80 80 GLN GLN B . n B 1 81 TYR 81 81 81 TYR TYR B . n B 1 82 TRP 82 82 82 TRP TRP B . n B 1 83 SER 83 83 83 SER SER B . n B 1 84 PRO 84 84 84 PRO PRO B . n B 1 85 ASP 85 85 85 ASP ASP B . n B 1 86 HIS 86 86 86 HIS HIS B . n B 1 87 TYR 87 87 87 TYR TYR B . n B 1 88 ALA 88 88 88 ALA ALA B . n B 1 89 THR 89 89 89 THR THR B . n B 1 90 PHE 90 90 90 PHE PHE B . n B 1 91 GLN 91 91 91 GLN GLN B . n B 1 92 GLU 92 92 92 GLU GLU B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 ASP 94 94 94 ASP ASP B . n B 1 95 PRO 95 95 95 PRO PRO B . n B 1 96 ARG 96 96 96 ARG ARG B . n B 1 97 CYS 97 97 97 CYS CYS B . n C 1 1 ALA 1 1 ? ? ? C . n C 1 2 ASP 2 2 2 ASP ASP C . n C 1 3 PRO 3 3 3 PRO PRO C . n C 1 4 ALA 4 4 4 ALA ALA C . n C 1 5 LEU 5 5 5 LEU LEU C . n C 1 6 ALA 6 6 6 ALA ALA C . n C 1 7 ASP 7 7 7 ASP ASP C . n C 1 8 VAL 8 8 8 VAL VAL C . n C 1 9 CYS 9 9 9 CYS CYS C . n C 1 10 ARG 10 10 10 ARG ARG C . n C 1 11 THR 11 11 11 THR THR C . n C 1 12 LYS 12 12 12 LYS LYS C . n C 1 13 LEU 13 13 13 LEU LEU C . n C 1 14 PRO 14 14 14 PRO PRO C . n C 1 15 SER 15 15 15 SER SER C . n C 1 16 GLN 16 16 16 GLN GLN C . n C 1 17 ALA 17 17 17 ALA ALA C . n C 1 18 GLN 18 18 18 GLN GLN C . n C 1 19 ASP 19 19 19 ASP ASP C . n C 1 20 THR 20 20 20 THR THR C . n C 1 21 LEU 21 21 21 LEU LEU C . n C 1 22 ALA 22 22 22 ALA ALA C . n C 1 23 LEU 23 23 23 LEU LEU C . n C 1 24 ILE 24 24 24 ILE ILE C . n C 1 25 ALA 25 25 25 ALA ALA C . n C 1 26 LYS 26 26 26 LYS LYS C . n C 1 27 ASN 27 27 27 ASN ASN C . n C 1 28 GLY 28 28 28 GLY GLY C . n C 1 29 PRO 29 29 29 PRO PRO C . n C 1 30 TYR 30 30 30 TYR TYR C . n C 1 31 PRO 31 31 31 PRO PRO C . n C 1 32 TYR 32 32 32 TYR TYR C . n C 1 33 ASN 33 33 33 ASN ASN C . n C 1 34 ARG 34 34 34 ARG ARG C . n C 1 35 ASP 35 35 35 ASP ASP C . n C 1 36 GLY 36 36 36 GLY GLY C . n C 1 37 VAL 37 37 37 VAL VAL C . n C 1 38 VAL 38 38 38 VAL VAL C . n C 1 39 PHE 39 39 39 PHE PHE C . n C 1 40 GLU 40 40 40 GLU GLU C . n C 1 41 ASN 41 41 41 ASN ASN C . n C 1 42 ARG 42 42 42 ARG ARG C . n C 1 43 GLU 43 43 43 GLU GLU C . n C 1 44 SER 44 44 44 SER SER C . n C 1 45 ARG 45 45 45 ARG ARG C . n C 1 46 LEU 46 46 46 LEU LEU C . n C 1 47 PRO 47 47 47 PRO PRO C . n C 1 48 LYS 48 48 48 LYS LYS C . n C 1 49 LYS 49 49 49 LYS LYS C . n C 1 50 GLY 50 50 50 GLY GLY C . n C 1 51 ASN 51 51 51 ASN ASN C . n C 1 52 GLY 52 52 52 GLY GLY C . n C 1 53 TYR 53 53 53 TYR TYR C . n C 1 54 TYR 54 54 54 TYR TYR C . n C 1 55 HIS 55 55 55 HIS HIS C . n C 1 56 GLU 56 56 56 GLU GLU C . n C 1 57 PHE 57 57 57 PHE PHE C . n C 1 58 THR 58 58 58 THR THR C . n C 1 59 VAL 59 59 59 VAL VAL C . n C 1 60 VAL 60 60 60 VAL VAL C . n C 1 61 THR 61 61 61 THR THR C . n C 1 62 PRO 62 62 62 PRO PRO C . n C 1 63 GLY 63 63 63 GLY GLY C . n C 1 64 SER 64 64 64 SER SER C . n C 1 65 ASN 65 65 65 ASN ASN C . n C 1 66 ASP 66 66 66 ASP ASP C . n C 1 67 ARG 67 67 67 ARG ARG C . n C 1 68 GLY 68 68 68 GLY GLY C . n C 1 69 THR 69 69 69 THR THR C . n C 1 70 ARG 70 70 70 ARG ARG C . n C 1 71 ARG 71 71 71 ARG ARG C . n C 1 72 VAL 72 72 72 VAL VAL C . n C 1 73 VAL 73 73 73 VAL VAL C . n C 1 74 THR 74 74 74 THR THR C . n C 1 75 GLY 75 75 75 GLY GLY C . n C 1 76 GLY 76 76 76 GLY GLY C . n C 1 77 TYR 77 77 77 TYR TYR C . n C 1 78 GLY 78 78 78 GLY GLY C . n C 1 79 GLU 79 79 79 GLU GLU C . n C 1 80 GLN 80 80 80 GLN GLN C . n C 1 81 TYR 81 81 81 TYR TYR C . n C 1 82 TRP 82 82 82 TRP TRP C . n C 1 83 SER 83 83 83 SER SER C . n C 1 84 PRO 84 84 84 PRO PRO C . n C 1 85 ASP 85 85 85 ASP ASP C . n C 1 86 HIS 86 86 86 HIS HIS C . n C 1 87 TYR 87 87 87 TYR TYR C . n C 1 88 ALA 88 88 88 ALA ALA C . n C 1 89 THR 89 89 89 THR THR C . n C 1 90 PHE 90 90 90 PHE PHE C . n C 1 91 GLN 91 91 91 GLN GLN C . n C 1 92 GLU 92 92 92 GLU GLU C . n C 1 93 ILE 93 93 93 ILE ILE C . n C 1 94 ASP 94 94 94 ASP ASP C . n C 1 95 PRO 95 95 95 PRO PRO C . n C 1 96 ARG 96 96 96 ARG ARG C . n C 1 97 CYS 97 97 97 CYS CYS C . n D 1 1 ALA 1 1 ? ? ? D . n D 1 2 ASP 2 2 2 ASP ASP D . n D 1 3 PRO 3 3 3 PRO PRO D . n D 1 4 ALA 4 4 4 ALA ALA D . n D 1 5 LEU 5 5 5 LEU LEU D . n D 1 6 ALA 6 6 6 ALA ALA D . n D 1 7 ASP 7 7 7 ASP ASP D . n D 1 8 VAL 8 8 8 VAL VAL D . n D 1 9 CYS 9 9 9 CYS CYS D . n D 1 10 ARG 10 10 10 ARG ARG D . n D 1 11 THR 11 11 11 THR THR D . n D 1 12 LYS 12 12 12 LYS LYS D . n D 1 13 LEU 13 13 13 LEU LEU D . n D 1 14 PRO 14 14 14 PRO PRO D . n D 1 15 SER 15 15 15 SER SER D . n D 1 16 GLN 16 16 16 GLN GLN D . n D 1 17 ALA 17 17 17 ALA ALA D . n D 1 18 GLN 18 18 18 GLN GLN D . n D 1 19 ASP 19 19 19 ASP ASP D . n D 1 20 THR 20 20 20 THR THR D . n D 1 21 LEU 21 21 21 LEU LEU D . n D 1 22 ALA 22 22 22 ALA ALA D . n D 1 23 LEU 23 23 23 LEU LEU D . n D 1 24 ILE 24 24 24 ILE ILE D . n D 1 25 ALA 25 25 25 ALA ALA D . n D 1 26 LYS 26 26 26 LYS LYS D . n D 1 27 ASN 27 27 27 ASN ASN D . n D 1 28 GLY 28 28 28 GLY GLY D . n D 1 29 PRO 29 29 29 PRO PRO D . n D 1 30 TYR 30 30 30 TYR TYR D . n D 1 31 PRO 31 31 31 PRO PRO D . n D 1 32 TYR 32 32 32 TYR TYR D . n D 1 33 ASN 33 33 33 ASN ASN D . n D 1 34 ARG 34 34 34 ARG ARG D . n D 1 35 ASP 35 35 35 ASP ASP D . n D 1 36 GLY 36 36 36 GLY GLY D . n D 1 37 VAL 37 37 37 VAL VAL D . n D 1 38 VAL 38 38 38 VAL VAL D . n D 1 39 PHE 39 39 39 PHE PHE D . n D 1 40 GLU 40 40 40 GLU GLU D . n D 1 41 ASN 41 41 41 ASN ASN D . n D 1 42 ARG 42 42 42 ARG ARG D . n D 1 43 GLU 43 43 43 GLU GLU D . n D 1 44 SER 44 44 44 SER SER D . n D 1 45 ARG 45 45 45 ARG ARG D . n D 1 46 LEU 46 46 46 LEU LEU D . n D 1 47 PRO 47 47 47 PRO PRO D . n D 1 48 LYS 48 48 48 LYS LYS D . n D 1 49 LYS 49 49 49 LYS LYS D . n D 1 50 GLY 50 50 50 GLY GLY D . n D 1 51 ASN 51 51 51 ASN ASN D . n D 1 52 GLY 52 52 52 GLY GLY D . n D 1 53 TYR 53 53 53 TYR TYR D . n D 1 54 TYR 54 54 54 TYR TYR D . n D 1 55 HIS 55 55 55 HIS HIS D . n D 1 56 GLU 56 56 56 GLU GLU D . n D 1 57 PHE 57 57 57 PHE PHE D . n D 1 58 THR 58 58 58 THR THR D . n D 1 59 VAL 59 59 59 VAL VAL D . n D 1 60 VAL 60 60 60 VAL VAL D . n D 1 61 THR 61 61 61 THR THR D . n D 1 62 PRO 62 62 62 PRO PRO D . n D 1 63 GLY 63 63 63 GLY GLY D . n D 1 64 SER 64 64 64 SER SER D . n D 1 65 ASN 65 65 65 ASN ASN D . n D 1 66 ASP 66 66 66 ASP ASP D . n D 1 67 ARG 67 67 67 ARG ARG D . n D 1 68 GLY 68 68 68 GLY GLY D . n D 1 69 THR 69 69 69 THR THR D . n D 1 70 ARG 70 70 70 ARG ARG D . n D 1 71 ARG 71 71 71 ARG ARG D . n D 1 72 VAL 72 72 72 VAL VAL D . n D 1 73 VAL 73 73 73 VAL VAL D . n D 1 74 THR 74 74 74 THR THR D . n D 1 75 GLY 75 75 75 GLY GLY D . n D 1 76 GLY 76 76 76 GLY GLY D . n D 1 77 TYR 77 77 77 TYR TYR D . n D 1 78 GLY 78 78 78 GLY GLY D . n D 1 79 GLU 79 79 79 GLU GLU D . n D 1 80 GLN 80 80 80 GLN GLN D . n D 1 81 TYR 81 81 81 TYR TYR D . n D 1 82 TRP 82 82 82 TRP TRP D . n D 1 83 SER 83 83 83 SER SER D . n D 1 84 PRO 84 84 84 PRO PRO D . n D 1 85 ASP 85 85 85 ASP ASP D . n D 1 86 HIS 86 86 86 HIS HIS D . n D 1 87 TYR 87 87 87 TYR TYR D . n D 1 88 ALA 88 88 88 ALA ALA D . n D 1 89 THR 89 89 89 THR THR D . n D 1 90 PHE 90 90 90 PHE PHE D . n D 1 91 GLN 91 91 91 GLN GLN D . n D 1 92 GLU 92 92 92 GLU GLU D . n D 1 93 ILE 93 93 93 ILE ILE D . n D 1 94 ASP 94 94 94 ASP ASP D . n D 1 95 PRO 95 95 95 PRO PRO D . n D 1 96 ARG 96 96 96 ARG ARG D . n D 1 97 CYS 97 97 97 CYS CYS D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BGC 1 99 99 BGC GLC A . F 3 SO4 1 100 100 SO4 SO4 A . G 4 3GP 1 98 98 3GP 3GP A . H 2 BGC 1 99 99 BGC GLC B . I 4 3GP 1 98 98 3GP 3GP B . J 2 BGC 1 99 99 BGC GLC C . K 4 3GP 1 98 98 3GP 3GP C . L 4 3GP 1 98 98 3GP 3GP D . M 5 HOH 1 102 4 HOH HOH A . M 5 HOH 2 103 6 HOH HOH A . M 5 HOH 3 104 8 HOH HOH A . M 5 HOH 4 105 10 HOH HOH A . M 5 HOH 5 106 11 HOH HOH A . M 5 HOH 6 107 12 HOH HOH A . M 5 HOH 7 108 13 HOH HOH A . M 5 HOH 8 109 16 HOH HOH A . M 5 HOH 9 110 17 HOH HOH A . M 5 HOH 10 111 18 HOH HOH A . M 5 HOH 11 112 20 HOH HOH A . M 5 HOH 12 113 21 HOH HOH A . M 5 HOH 13 115 26 HOH HOH A . M 5 HOH 14 116 27 HOH HOH A . M 5 HOH 15 117 28 HOH HOH A . M 5 HOH 16 118 29 HOH HOH A . M 5 HOH 17 119 31 HOH HOH A . M 5 HOH 18 121 34 HOH HOH A . M 5 HOH 19 122 35 HOH HOH A . M 5 HOH 20 123 38 HOH HOH A . M 5 HOH 21 124 39 HOH HOH A . M 5 HOH 22 125 40 HOH HOH A . M 5 HOH 23 126 42 HOH HOH A . M 5 HOH 24 127 44 HOH HOH A . M 5 HOH 25 128 45 HOH HOH A . M 5 HOH 26 129 49 HOH HOH A . M 5 HOH 27 130 50 HOH HOH A . M 5 HOH 28 132 61 HOH HOH A . M 5 HOH 29 133 71 HOH HOH A . M 5 HOH 30 134 88 HOH HOH A . M 5 HOH 31 135 96 HOH HOH A . M 5 HOH 32 136 99 HOH HOH A . M 5 HOH 33 137 102 HOH HOH A . M 5 HOH 34 138 107 HOH HOH A . M 5 HOH 35 139 110 HOH HOH A . M 5 HOH 36 140 113 HOH HOH A . M 5 HOH 37 141 115 HOH HOH A . M 5 HOH 38 142 120 HOH HOH A . N 5 HOH 1 114 22 HOH HOH B . N 5 HOH 2 115 7 HOH HOH B . N 5 HOH 3 116 47 HOH HOH B . N 5 HOH 4 117 56 HOH HOH B . N 5 HOH 5 118 57 HOH HOH B . N 5 HOH 6 119 58 HOH HOH B . N 5 HOH 7 120 59 HOH HOH B . N 5 HOH 8 121 60 HOH HOH B . N 5 HOH 9 122 65 HOH HOH B . N 5 HOH 10 123 68 HOH HOH B . N 5 HOH 11 124 69 HOH HOH B . N 5 HOH 12 125 70 HOH HOH B . N 5 HOH 13 126 75 HOH HOH B . N 5 HOH 14 127 77 HOH HOH B . N 5 HOH 15 128 78 HOH HOH B . N 5 HOH 16 129 79 HOH HOH B . N 5 HOH 17 130 81 HOH HOH B . N 5 HOH 18 131 91 HOH HOH B . N 5 HOH 19 132 93 HOH HOH B . N 5 HOH 20 133 94 HOH HOH B . N 5 HOH 21 134 95 HOH HOH B . N 5 HOH 22 135 105 HOH HOH B . N 5 HOH 23 136 114 HOH HOH B . N 5 HOH 24 137 119 HOH HOH B . N 5 HOH 25 138 124 HOH HOH B . O 5 HOH 1 120 32 HOH HOH C . O 5 HOH 2 121 53 HOH HOH C . O 5 HOH 3 122 54 HOH HOH C . O 5 HOH 4 123 55 HOH HOH C . O 5 HOH 5 124 62 HOH HOH C . O 5 HOH 6 125 63 HOH HOH C . O 5 HOH 7 126 64 HOH HOH C . O 5 HOH 8 127 66 HOH HOH C . O 5 HOH 9 128 67 HOH HOH C . O 5 HOH 10 129 72 HOH HOH C . O 5 HOH 11 130 73 HOH HOH C . O 5 HOH 12 131 74 HOH HOH C . O 5 HOH 13 132 80 HOH HOH C . O 5 HOH 14 133 82 HOH HOH C . O 5 HOH 15 134 84 HOH HOH C . O 5 HOH 16 135 86 HOH HOH C . O 5 HOH 17 136 87 HOH HOH C . O 5 HOH 18 137 89 HOH HOH C . O 5 HOH 19 138 92 HOH HOH C . O 5 HOH 20 139 101 HOH HOH C . O 5 HOH 21 140 103 HOH HOH C . O 5 HOH 22 141 108 HOH HOH C . O 5 HOH 23 142 109 HOH HOH C . O 5 HOH 24 143 116 HOH HOH C . O 5 HOH 25 144 117 HOH HOH C . O 5 HOH 26 145 121 HOH HOH C . P 5 HOH 1 101 1 HOH HOH D . P 5 HOH 2 102 52 HOH HOH D . P 5 HOH 3 103 2 HOH HOH D . P 5 HOH 4 104 3 HOH HOH D . P 5 HOH 5 105 5 HOH HOH D . P 5 HOH 6 106 9 HOH HOH D . P 5 HOH 7 107 14 HOH HOH D . P 5 HOH 8 108 15 HOH HOH D . P 5 HOH 9 109 19 HOH HOH D . P 5 HOH 10 110 23 HOH HOH D . P 5 HOH 11 111 24 HOH HOH D . P 5 HOH 12 112 25 HOH HOH D . P 5 HOH 13 113 30 HOH HOH D . P 5 HOH 14 114 33 HOH HOH D . P 5 HOH 15 115 36 HOH HOH D . P 5 HOH 16 116 37 HOH HOH D . P 5 HOH 17 117 41 HOH HOH D . P 5 HOH 18 118 43 HOH HOH D . P 5 HOH 19 119 46 HOH HOH D . P 5 HOH 20 120 48 HOH HOH D . P 5 HOH 21 121 51 HOH HOH D . P 5 HOH 22 122 76 HOH HOH D . P 5 HOH 23 123 83 HOH HOH D . P 5 HOH 24 124 85 HOH HOH D . P 5 HOH 25 125 90 HOH HOH D . P 5 HOH 26 126 97 HOH HOH D . P 5 HOH 27 127 98 HOH HOH D . P 5 HOH 28 128 100 HOH HOH D . P 5 HOH 29 129 104 HOH HOH D . P 5 HOH 30 130 106 HOH HOH D . P 5 HOH 31 131 111 HOH HOH D . P 5 HOH 32 132 112 HOH HOH D . P 5 HOH 33 133 118 HOH HOH D . P 5 HOH 34 134 122 HOH HOH D . P 5 HOH 35 135 123 HOH HOH D . P 5 HOH 36 136 125 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 3 author_and_software_defined_assembly PISA monomeric 1 4 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,E,F,G,M 2 1 B,H,I,N 3 1 C,J,K,O 4 1 D,L,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2023-11-01 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' diffrn_source 3 3 'Structure model' entity 4 3 'Structure model' pdbx_chem_comp_identifier 5 3 'Structure model' pdbx_entity_nonpoly 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen 8 4 'Structure model' chem_comp 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' database_2 12 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 4 'Structure model' '_chem_comp.pdbx_synonyms' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 73.8331 -2.4647 17.3542 0.0449 0.0728 -0.1063 -0.0330 0.0592 -0.0064 8.6670 6.6780 3.3020 3.4603 -2.6776 2.5514 -0.2523 -0.7722 -0.1307 0.2378 -0.0896 0.2546 0.5666 0.0813 0.3419 'X-RAY DIFFRACTION' 2 ? refined 86.2148 4.2778 9.7837 0.0130 0.0458 0.0336 -0.0500 0.0378 0.0277 1.1805 2.1150 3.3190 1.1233 0.6708 -0.3900 -0.0525 0.1339 0.0784 0.2183 -0.1451 -0.1376 -0.2454 0.4656 0.1976 'X-RAY DIFFRACTION' 3 ? refined 84.9069 -0.3825 13.2066 0.0269 0.0354 0.0491 -0.0343 0.0271 0.0374 3.5663 1.8917 2.3569 0.4712 1.0895 -0.6481 0.0693 -0.2361 -0.1097 -0.0193 -0.1479 -0.0406 0.0607 0.2441 0.0786 'X-RAY DIFFRACTION' 4 ? refined 80.2023 -4.8983 16.8886 0.0151 0.0420 -0.0035 -0.0481 -0.0186 0.0611 7.1040 1.6149 0.9147 2.2942 1.0843 1.1594 0.1625 0.0047 -0.2980 0.1899 0.0247 -0.2195 0.2732 0.1078 -0.1872 'X-RAY DIFFRACTION' 5 ? refined 75.4133 39.4210 15.8359 -0.0832 0.0605 -0.0085 -0.0265 0.0662 0.0190 3.6462 8.5600 5.8962 -4.8470 -1.0832 -0.9134 0.1502 0.2371 0.4398 -0.1746 0.2824 -0.0063 -0.2418 0.8693 -0.4327 'X-RAY DIFFRACTION' 6 ? refined 70.3020 34.4132 29.3559 0.0500 0.0311 -0.0160 -0.0127 0.0212 0.0216 3.0269 2.1535 1.1140 0.0854 0.7654 -0.9387 0.0848 -0.3117 -0.0325 0.2817 -0.1554 0.0119 0.0074 0.0086 0.0706 'X-RAY DIFFRACTION' 7 ? refined 73.8426 34.2315 25.9890 0.0462 0.0453 0.0296 -0.0161 0.0264 0.0218 4.6564 1.0727 3.5234 -0.6138 -0.5254 -0.0160 0.0032 -0.0300 -0.1845 0.0174 -0.0987 0.0124 0.1220 0.2629 0.0954 'X-RAY DIFFRACTION' 8 ? refined 75.5368 41.2149 22.0817 -0.0472 0.0108 0.0313 -0.0455 0.0135 0.0814 2.4471 3.0547 13.3101 -2.7242 4.4348 -4.5963 -0.1423 0.1535 0.3975 0.1727 -0.3799 -0.3324 -0.0600 0.4694 0.5223 'X-RAY DIFFRACTION' 9 ? refined 64.5480 11.3404 31.4043 0.0382 0.0067 0.0480 -0.0122 0.0487 -0.0177 3.5826 0.8914 2.3699 0.4070 -0.3101 0.5733 -0.0727 0.0539 -0.1295 0.0935 0.1874 0.0696 -0.0274 0.2909 -0.1148 'X-RAY DIFFRACTION' 10 ? refined 65.4027 2.4468 44.3177 0.0152 -0.0425 -0.0159 -0.0110 -0.0527 0.0957 13.9409 5.7097 14.7738 -0.6953 -9.1153 5.3869 -0.1249 -1.4439 -0.7562 0.8998 -0.1212 -0.5399 0.4403 0.6060 0.2461 'X-RAY DIFFRACTION' 11 ? refined 66.5904 10.4718 36.6090 0.0141 0.0166 0.0265 -0.0056 0.0007 -0.0437 1.3864 2.6175 2.6795 0.7798 -1.9053 -0.7067 0.0339 -0.2223 0.0507 -0.0430 0.0442 -0.1954 0.0873 0.2002 -0.0781 'X-RAY DIFFRACTION' 12 ? refined 87.6493 26.1461 4.3323 0.0442 0.0206 0.0036 0.0238 0.0401 0.0247 1.7822 4.5705 3.4747 -0.7832 0.9989 0.9892 -0.0845 -0.0398 0.0215 -0.1494 0.1456 -0.2328 -0.1672 0.0398 -0.0612 'X-RAY DIFFRACTION' 13 ? refined 102.6511 32.9312 0.8888 -0.0517 0.1753 0.0129 -0.1028 -0.0517 0.1106 6.7245 2.7264 6.5643 1.2447 0.0233 0.7255 0.2785 -0.6226 0.1428 0.7745 -0.5263 -1.5490 -0.8691 1.2828 0.2478 'X-RAY DIFFRACTION' 14 ? refined 92.5256 25.5171 4.7586 0.0180 0.0204 0.0074 0.0460 0.0065 -0.0132 1.3467 2.4961 3.7338 0.4946 -2.1639 -0.0241 -0.0489 -0.0980 0.1461 0.2578 0.1704 0.0190 0.2395 0.2324 -0.1216 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 4 A 4 A 18 A 18 ? 'X-RAY DIFFRACTION' ? 2 2 A 19 A 19 A 44 A 44 ? 'X-RAY DIFFRACTION' ? 3 3 A 45 A 45 A 83 A 83 ? 'X-RAY DIFFRACTION' ? 4 4 A 84 A 84 A 97 A 97 ? 'X-RAY DIFFRACTION' ? 5 5 B 4 B 4 B 16 B 16 ? 'X-RAY DIFFRACTION' ? 6 6 B 17 B 17 B 52 B 52 ? 'X-RAY DIFFRACTION' ? 7 7 B 53 B 53 B 84 B 84 ? 'X-RAY DIFFRACTION' ? 8 8 B 85 B 85 B 97 B 97 ? 'X-RAY DIFFRACTION' ? 9 9 C 2 C 2 C 34 C 34 ? 'X-RAY DIFFRACTION' ? 10 10 C 35 C 35 C 51 C 51 ? 'X-RAY DIFFRACTION' ? 11 11 C 52 C 52 C 97 C 97 ? 'X-RAY DIFFRACTION' ? 12 12 D 2 D 2 D 39 D 39 ? 'X-RAY DIFFRACTION' ? 13 13 D 40 D 40 D 52 D 52 ? 'X-RAY DIFFRACTION' ? 14 14 D 53 D 53 D 97 D 97 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N B ASN 33 ? ? O3 B BGC 99 ? ? 1.41 2 1 NH2 C ARG 70 ? B O4 B BGC 99 ? ? 2.00 3 1 OE2 A GLU 56 ? ? OH A TYR 87 ? ? 2.09 4 1 O A ARG 67 ? ? O A HOH 133 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 47 ? ? -35.56 131.51 2 1 ASN B 27 ? ? 39.48 57.18 3 1 ASN D 41 ? ? 71.74 33.92 4 1 ASP D 85 ? ? -145.35 54.42 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 A ASP 2 ? A ASP 2 3 1 Y 1 A PRO 3 ? A PRO 3 4 1 Y 1 B ALA 1 ? B ALA 1 5 1 Y 1 B ASP 2 ? B ASP 2 6 1 Y 1 B PRO 3 ? B PRO 3 7 1 Y 1 C ALA 1 ? C ALA 1 8 1 Y 1 D ALA 1 ? D ALA 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3GP P P N N 1 3GP O1P O N N 2 3GP O2P O N N 3 3GP O3P O N N 4 3GP "O5'" O N N 5 3GP "C5'" C N N 6 3GP "C4'" C N R 7 3GP "O4'" O N N 8 3GP "C3'" C N S 9 3GP "O3'" O N N 10 3GP "C2'" C N R 11 3GP "O2'" O N N 12 3GP "C1'" C N R 13 3GP N9 N Y N 14 3GP C8 C Y N 15 3GP N7 N Y N 16 3GP C5 C Y N 17 3GP C6 C N N 18 3GP O6 O N N 19 3GP N1 N N N 20 3GP C2 C N N 21 3GP N2 N N N 22 3GP N3 N N N 23 3GP C4 C Y N 24 3GP HOP2 H N N 25 3GP HOP3 H N N 26 3GP "HO5'" H N N 27 3GP "H5'1" H N N 28 3GP "H5'2" H N N 29 3GP "H4'" H N N 30 3GP "H3'" H N N 31 3GP "H2'" H N N 32 3GP "HO2'" H N N 33 3GP "H1'" H N N 34 3GP H8 H N N 35 3GP HN1 H N N 36 3GP HN21 H N N 37 3GP HN22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 BGC C2 C N R 112 BGC C3 C N S 113 BGC C4 C N S 114 BGC C5 C N R 115 BGC C6 C N N 116 BGC C1 C N R 117 BGC O1 O N N 118 BGC O2 O N N 119 BGC O3 O N N 120 BGC O4 O N N 121 BGC O5 O N N 122 BGC O6 O N N 123 BGC H2 H N N 124 BGC H3 H N N 125 BGC H4 H N N 126 BGC H5 H N N 127 BGC H61 H N N 128 BGC H62 H N N 129 BGC H1 H N N 130 BGC HO1 H N N 131 BGC HO2 H N N 132 BGC HO3 H N N 133 BGC HO4 H N N 134 BGC HO6 H N N 135 CYS N N N N 136 CYS CA C N R 137 CYS C C N N 138 CYS O O N N 139 CYS CB C N N 140 CYS SG S N N 141 CYS OXT O N N 142 CYS H H N N 143 CYS H2 H N N 144 CYS HA H N N 145 CYS HB2 H N N 146 CYS HB3 H N N 147 CYS HG H N N 148 CYS HXT H N N 149 GLN N N N N 150 GLN CA C N S 151 GLN C C N N 152 GLN O O N N 153 GLN CB C N N 154 GLN CG C N N 155 GLN CD C N N 156 GLN OE1 O N N 157 GLN NE2 N N N 158 GLN OXT O N N 159 GLN H H N N 160 GLN H2 H N N 161 GLN HA H N N 162 GLN HB2 H N N 163 GLN HB3 H N N 164 GLN HG2 H N N 165 GLN HG3 H N N 166 GLN HE21 H N N 167 GLN HE22 H N N 168 GLN HXT H N N 169 GLU N N N N 170 GLU CA C N S 171 GLU C C N N 172 GLU O O N N 173 GLU CB C N N 174 GLU CG C N N 175 GLU CD C N N 176 GLU OE1 O N N 177 GLU OE2 O N N 178 GLU OXT O N N 179 GLU H H N N 180 GLU H2 H N N 181 GLU HA H N N 182 GLU HB2 H N N 183 GLU HB3 H N N 184 GLU HG2 H N N 185 GLU HG3 H N N 186 GLU HE2 H N N 187 GLU HXT H N N 188 GLY N N N N 189 GLY CA C N N 190 GLY C C N N 191 GLY O O N N 192 GLY OXT O N N 193 GLY H H N N 194 GLY H2 H N N 195 GLY HA2 H N N 196 GLY HA3 H N N 197 GLY HXT H N N 198 HIS N N N N 199 HIS CA C N S 200 HIS C C N N 201 HIS O O N N 202 HIS CB C N N 203 HIS CG C Y N 204 HIS ND1 N Y N 205 HIS CD2 C Y N 206 HIS CE1 C Y N 207 HIS NE2 N Y N 208 HIS OXT O N N 209 HIS H H N N 210 HIS H2 H N N 211 HIS HA H N N 212 HIS HB2 H N N 213 HIS HB3 H N N 214 HIS HD1 H N N 215 HIS HD2 H N N 216 HIS HE1 H N N 217 HIS HE2 H N N 218 HIS HXT H N N 219 HOH O O N N 220 HOH H1 H N N 221 HOH H2 H N N 222 ILE N N N N 223 ILE CA C N S 224 ILE C C N N 225 ILE O O N N 226 ILE CB C N S 227 ILE CG1 C N N 228 ILE CG2 C N N 229 ILE CD1 C N N 230 ILE OXT O N N 231 ILE H H N N 232 ILE H2 H N N 233 ILE HA H N N 234 ILE HB H N N 235 ILE HG12 H N N 236 ILE HG13 H N N 237 ILE HG21 H N N 238 ILE HG22 H N N 239 ILE HG23 H N N 240 ILE HD11 H N N 241 ILE HD12 H N N 242 ILE HD13 H N N 243 ILE HXT H N N 244 LEU N N N N 245 LEU CA C N S 246 LEU C C N N 247 LEU O O N N 248 LEU CB C N N 249 LEU CG C N N 250 LEU CD1 C N N 251 LEU CD2 C N N 252 LEU OXT O N N 253 LEU H H N N 254 LEU H2 H N N 255 LEU HA H N N 256 LEU HB2 H N N 257 LEU HB3 H N N 258 LEU HG H N N 259 LEU HD11 H N N 260 LEU HD12 H N N 261 LEU HD13 H N N 262 LEU HD21 H N N 263 LEU HD22 H N N 264 LEU HD23 H N N 265 LEU HXT H N N 266 LYS N N N N 267 LYS CA C N S 268 LYS C C N N 269 LYS O O N N 270 LYS CB C N N 271 LYS CG C N N 272 LYS CD C N N 273 LYS CE C N N 274 LYS NZ N N N 275 LYS OXT O N N 276 LYS H H N N 277 LYS H2 H N N 278 LYS HA H N N 279 LYS HB2 H N N 280 LYS HB3 H N N 281 LYS HG2 H N N 282 LYS HG3 H N N 283 LYS HD2 H N N 284 LYS HD3 H N N 285 LYS HE2 H N N 286 LYS HE3 H N N 287 LYS HZ1 H N N 288 LYS HZ2 H N N 289 LYS HZ3 H N N 290 LYS HXT H N N 291 PHE N N N N 292 PHE CA C N S 293 PHE C C N N 294 PHE O O N N 295 PHE CB C N N 296 PHE CG C Y N 297 PHE CD1 C Y N 298 PHE CD2 C Y N 299 PHE CE1 C Y N 300 PHE CE2 C Y N 301 PHE CZ C Y N 302 PHE OXT O N N 303 PHE H H N N 304 PHE H2 H N N 305 PHE HA H N N 306 PHE HB2 H N N 307 PHE HB3 H N N 308 PHE HD1 H N N 309 PHE HD2 H N N 310 PHE HE1 H N N 311 PHE HE2 H N N 312 PHE HZ H N N 313 PHE HXT H N N 314 PRO N N N N 315 PRO CA C N S 316 PRO C C N N 317 PRO O O N N 318 PRO CB C N N 319 PRO CG C N N 320 PRO CD C N N 321 PRO OXT O N N 322 PRO H H N N 323 PRO HA H N N 324 PRO HB2 H N N 325 PRO HB3 H N N 326 PRO HG2 H N N 327 PRO HG3 H N N 328 PRO HD2 H N N 329 PRO HD3 H N N 330 PRO HXT H N N 331 SER N N N N 332 SER CA C N S 333 SER C C N N 334 SER O O N N 335 SER CB C N N 336 SER OG O N N 337 SER OXT O N N 338 SER H H N N 339 SER H2 H N N 340 SER HA H N N 341 SER HB2 H N N 342 SER HB3 H N N 343 SER HG H N N 344 SER HXT H N N 345 SO4 S S N N 346 SO4 O1 O N N 347 SO4 O2 O N N 348 SO4 O3 O N N 349 SO4 O4 O N N 350 THR N N N N 351 THR CA C N S 352 THR C C N N 353 THR O O N N 354 THR CB C N R 355 THR OG1 O N N 356 THR CG2 C N N 357 THR OXT O N N 358 THR H H N N 359 THR H2 H N N 360 THR HA H N N 361 THR HB H N N 362 THR HG1 H N N 363 THR HG21 H N N 364 THR HG22 H N N 365 THR HG23 H N N 366 THR HXT H N N 367 TRP N N N N 368 TRP CA C N S 369 TRP C C N N 370 TRP O O N N 371 TRP CB C N N 372 TRP CG C Y N 373 TRP CD1 C Y N 374 TRP CD2 C Y N 375 TRP NE1 N Y N 376 TRP CE2 C Y N 377 TRP CE3 C Y N 378 TRP CZ2 C Y N 379 TRP CZ3 C Y N 380 TRP CH2 C Y N 381 TRP OXT O N N 382 TRP H H N N 383 TRP H2 H N N 384 TRP HA H N N 385 TRP HB2 H N N 386 TRP HB3 H N N 387 TRP HD1 H N N 388 TRP HE1 H N N 389 TRP HE3 H N N 390 TRP HZ2 H N N 391 TRP HZ3 H N N 392 TRP HH2 H N N 393 TRP HXT H N N 394 TYR N N N N 395 TYR CA C N S 396 TYR C C N N 397 TYR O O N N 398 TYR CB C N N 399 TYR CG C Y N 400 TYR CD1 C Y N 401 TYR CD2 C Y N 402 TYR CE1 C Y N 403 TYR CE2 C Y N 404 TYR CZ C Y N 405 TYR OH O N N 406 TYR OXT O N N 407 TYR H H N N 408 TYR H2 H N N 409 TYR HA H N N 410 TYR HB2 H N N 411 TYR HB3 H N N 412 TYR HD1 H N N 413 TYR HD2 H N N 414 TYR HE1 H N N 415 TYR HE2 H N N 416 TYR HH H N N 417 TYR HXT H N N 418 VAL N N N N 419 VAL CA C N S 420 VAL C C N N 421 VAL O O N N 422 VAL CB C N N 423 VAL CG1 C N N 424 VAL CG2 C N N 425 VAL OXT O N N 426 VAL H H N N 427 VAL H2 H N N 428 VAL HA H N N 429 VAL HB H N N 430 VAL HG11 H N N 431 VAL HG12 H N N 432 VAL HG13 H N N 433 VAL HG21 H N N 434 VAL HG22 H N N 435 VAL HG23 H N N 436 VAL HXT H N N 437 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3GP P O1P doub N N 1 3GP P O2P sing N N 2 3GP P O3P sing N N 3 3GP P "O3'" sing N N 4 3GP O2P HOP2 sing N N 5 3GP O3P HOP3 sing N N 6 3GP "O5'" "C5'" sing N N 7 3GP "O5'" "HO5'" sing N N 8 3GP "C5'" "C4'" sing N N 9 3GP "C5'" "H5'1" sing N N 10 3GP "C5'" "H5'2" sing N N 11 3GP "C4'" "O4'" sing N N 12 3GP "C4'" "C3'" sing N N 13 3GP "C4'" "H4'" sing N N 14 3GP "O4'" "C1'" sing N N 15 3GP "C3'" "O3'" sing N N 16 3GP "C3'" "C2'" sing N N 17 3GP "C3'" "H3'" sing N N 18 3GP "C2'" "O2'" sing N N 19 3GP "C2'" "C1'" sing N N 20 3GP "C2'" "H2'" sing N N 21 3GP "O2'" "HO2'" sing N N 22 3GP "C1'" N9 sing N N 23 3GP "C1'" "H1'" sing N N 24 3GP N9 C8 sing Y N 25 3GP N9 C4 sing Y N 26 3GP C8 N7 doub Y N 27 3GP C8 H8 sing N N 28 3GP N7 C5 sing Y N 29 3GP C5 C6 sing N N 30 3GP C5 C4 doub Y N 31 3GP C6 O6 doub N N 32 3GP C6 N1 sing N N 33 3GP N1 C2 sing N N 34 3GP N1 HN1 sing N N 35 3GP C2 N2 sing N N 36 3GP C2 N3 doub N N 37 3GP N2 HN21 sing N N 38 3GP N2 HN22 sing N N 39 3GP N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 BGC C2 C3 sing N N 110 BGC C2 C1 sing N N 111 BGC C2 O2 sing N N 112 BGC C2 H2 sing N N 113 BGC C3 C4 sing N N 114 BGC C3 O3 sing N N 115 BGC C3 H3 sing N N 116 BGC C4 C5 sing N N 117 BGC C4 O4 sing N N 118 BGC C4 H4 sing N N 119 BGC C5 C6 sing N N 120 BGC C5 O5 sing N N 121 BGC C5 H5 sing N N 122 BGC C6 O6 sing N N 123 BGC C6 H61 sing N N 124 BGC C6 H62 sing N N 125 BGC C1 O1 sing N N 126 BGC C1 O5 sing N N 127 BGC C1 H1 sing N N 128 BGC O1 HO1 sing N N 129 BGC O2 HO2 sing N N 130 BGC O3 HO3 sing N N 131 BGC O4 HO4 sing N N 132 BGC O6 HO6 sing N N 133 CYS N CA sing N N 134 CYS N H sing N N 135 CYS N H2 sing N N 136 CYS CA C sing N N 137 CYS CA CB sing N N 138 CYS CA HA sing N N 139 CYS C O doub N N 140 CYS C OXT sing N N 141 CYS CB SG sing N N 142 CYS CB HB2 sing N N 143 CYS CB HB3 sing N N 144 CYS SG HG sing N N 145 CYS OXT HXT sing N N 146 GLN N CA sing N N 147 GLN N H sing N N 148 GLN N H2 sing N N 149 GLN CA C sing N N 150 GLN CA CB sing N N 151 GLN CA HA sing N N 152 GLN C O doub N N 153 GLN C OXT sing N N 154 GLN CB CG sing N N 155 GLN CB HB2 sing N N 156 GLN CB HB3 sing N N 157 GLN CG CD sing N N 158 GLN CG HG2 sing N N 159 GLN CG HG3 sing N N 160 GLN CD OE1 doub N N 161 GLN CD NE2 sing N N 162 GLN NE2 HE21 sing N N 163 GLN NE2 HE22 sing N N 164 GLN OXT HXT sing N N 165 GLU N CA sing N N 166 GLU N H sing N N 167 GLU N H2 sing N N 168 GLU CA C sing N N 169 GLU CA CB sing N N 170 GLU CA HA sing N N 171 GLU C O doub N N 172 GLU C OXT sing N N 173 GLU CB CG sing N N 174 GLU CB HB2 sing N N 175 GLU CB HB3 sing N N 176 GLU CG CD sing N N 177 GLU CG HG2 sing N N 178 GLU CG HG3 sing N N 179 GLU CD OE1 doub N N 180 GLU CD OE2 sing N N 181 GLU OE2 HE2 sing N N 182 GLU OXT HXT sing N N 183 GLY N CA sing N N 184 GLY N H sing N N 185 GLY N H2 sing N N 186 GLY CA C sing N N 187 GLY CA HA2 sing N N 188 GLY CA HA3 sing N N 189 GLY C O doub N N 190 GLY C OXT sing N N 191 GLY OXT HXT sing N N 192 HIS N CA sing N N 193 HIS N H sing N N 194 HIS N H2 sing N N 195 HIS CA C sing N N 196 HIS CA CB sing N N 197 HIS CA HA sing N N 198 HIS C O doub N N 199 HIS C OXT sing N N 200 HIS CB CG sing N N 201 HIS CB HB2 sing N N 202 HIS CB HB3 sing N N 203 HIS CG ND1 sing Y N 204 HIS CG CD2 doub Y N 205 HIS ND1 CE1 doub Y N 206 HIS ND1 HD1 sing N N 207 HIS CD2 NE2 sing Y N 208 HIS CD2 HD2 sing N N 209 HIS CE1 NE2 sing Y N 210 HIS CE1 HE1 sing N N 211 HIS NE2 HE2 sing N N 212 HIS OXT HXT sing N N 213 HOH O H1 sing N N 214 HOH O H2 sing N N 215 ILE N CA sing N N 216 ILE N H sing N N 217 ILE N H2 sing N N 218 ILE CA C sing N N 219 ILE CA CB sing N N 220 ILE CA HA sing N N 221 ILE C O doub N N 222 ILE C OXT sing N N 223 ILE CB CG1 sing N N 224 ILE CB CG2 sing N N 225 ILE CB HB sing N N 226 ILE CG1 CD1 sing N N 227 ILE CG1 HG12 sing N N 228 ILE CG1 HG13 sing N N 229 ILE CG2 HG21 sing N N 230 ILE CG2 HG22 sing N N 231 ILE CG2 HG23 sing N N 232 ILE CD1 HD11 sing N N 233 ILE CD1 HD12 sing N N 234 ILE CD1 HD13 sing N N 235 ILE OXT HXT sing N N 236 LEU N CA sing N N 237 LEU N H sing N N 238 LEU N H2 sing N N 239 LEU CA C sing N N 240 LEU CA CB sing N N 241 LEU CA HA sing N N 242 LEU C O doub N N 243 LEU C OXT sing N N 244 LEU CB CG sing N N 245 LEU CB HB2 sing N N 246 LEU CB HB3 sing N N 247 LEU CG CD1 sing N N 248 LEU CG CD2 sing N N 249 LEU CG HG sing N N 250 LEU CD1 HD11 sing N N 251 LEU CD1 HD12 sing N N 252 LEU CD1 HD13 sing N N 253 LEU CD2 HD21 sing N N 254 LEU CD2 HD22 sing N N 255 LEU CD2 HD23 sing N N 256 LEU OXT HXT sing N N 257 LYS N CA sing N N 258 LYS N H sing N N 259 LYS N H2 sing N N 260 LYS CA C sing N N 261 LYS CA CB sing N N 262 LYS CA HA sing N N 263 LYS C O doub N N 264 LYS C OXT sing N N 265 LYS CB CG sing N N 266 LYS CB HB2 sing N N 267 LYS CB HB3 sing N N 268 LYS CG CD sing N N 269 LYS CG HG2 sing N N 270 LYS CG HG3 sing N N 271 LYS CD CE sing N N 272 LYS CD HD2 sing N N 273 LYS CD HD3 sing N N 274 LYS CE NZ sing N N 275 LYS CE HE2 sing N N 276 LYS CE HE3 sing N N 277 LYS NZ HZ1 sing N N 278 LYS NZ HZ2 sing N N 279 LYS NZ HZ3 sing N N 280 LYS OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 SO4 S O1 doub N N 335 SO4 S O2 doub N N 336 SO4 S O3 sing N N 337 SO4 S O4 sing N N 338 THR N CA sing N N 339 THR N H sing N N 340 THR N H2 sing N N 341 THR CA C sing N N 342 THR CA CB sing N N 343 THR CA HA sing N N 344 THR C O doub N N 345 THR C OXT sing N N 346 THR CB OG1 sing N N 347 THR CB CG2 sing N N 348 THR CB HB sing N N 349 THR OG1 HG1 sing N N 350 THR CG2 HG21 sing N N 351 THR CG2 HG22 sing N N 352 THR CG2 HG23 sing N N 353 THR OXT HXT sing N N 354 TRP N CA sing N N 355 TRP N H sing N N 356 TRP N H2 sing N N 357 TRP CA C sing N N 358 TRP CA CB sing N N 359 TRP CA HA sing N N 360 TRP C O doub N N 361 TRP C OXT sing N N 362 TRP CB CG sing N N 363 TRP CB HB2 sing N N 364 TRP CB HB3 sing N N 365 TRP CG CD1 doub Y N 366 TRP CG CD2 sing Y N 367 TRP CD1 NE1 sing Y N 368 TRP CD1 HD1 sing N N 369 TRP CD2 CE2 doub Y N 370 TRP CD2 CE3 sing Y N 371 TRP NE1 CE2 sing Y N 372 TRP NE1 HE1 sing N N 373 TRP CE2 CZ2 sing Y N 374 TRP CE3 CZ3 doub Y N 375 TRP CE3 HE3 sing N N 376 TRP CZ2 CH2 doub Y N 377 TRP CZ2 HZ2 sing N N 378 TRP CZ3 CH2 sing Y N 379 TRP CZ3 HZ3 sing N N 380 TRP CH2 HH2 sing N N 381 TRP OXT HXT sing N N 382 TYR N CA sing N N 383 TYR N H sing N N 384 TYR N H2 sing N N 385 TYR CA C sing N N 386 TYR CA CB sing N N 387 TYR CA HA sing N N 388 TYR C O doub N N 389 TYR C OXT sing N N 390 TYR CB CG sing N N 391 TYR CB HB2 sing N N 392 TYR CB HB3 sing N N 393 TYR CG CD1 doub Y N 394 TYR CG CD2 sing Y N 395 TYR CD1 CE1 sing Y N 396 TYR CD1 HD1 sing N N 397 TYR CD2 CE2 doub Y N 398 TYR CD2 HD2 sing N N 399 TYR CE1 CZ doub Y N 400 TYR CE1 HE1 sing N N 401 TYR CE2 CZ sing Y N 402 TYR CE2 HE2 sing N N 403 TYR CZ OH sing N N 404 TYR OH HH sing N N 405 TYR OXT HXT sing N N 406 VAL N CA sing N N 407 VAL N H sing N N 408 VAL N H2 sing N N 409 VAL CA C sing N N 410 VAL CA CB sing N N 411 VAL CA HA sing N N 412 VAL C O doub N N 413 VAL C OXT sing N N 414 VAL CB CG1 sing N N 415 VAL CB CG2 sing N N 416 VAL CB HB sing N N 417 VAL CG1 HG11 sing N N 418 VAL CG1 HG12 sing N N 419 VAL CG1 HG13 sing N N 420 VAL CG2 HG21 sing N N 421 VAL CG2 HG22 sing N N 422 VAL CG2 HG23 sing N N 423 VAL OXT HXT sing N N 424 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 beta-D-glucopyranose BGC 3 'SULFATE ION' SO4 4 "GUANOSINE-3'-MONOPHOSPHATE" 3GP 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PY3 _pdbx_initial_refinement_model.details ? #