HEADER HYDROLASE 19-JUN-08 3DHY TITLE CRYSTAL STRUCTURES OF MYCOBACTERIUM TUBERCULOSIS S-ADENOSYL-L- TITLE 2 HOMOCYSTEINE HYDROLASE IN TERNARY COMPLEX WITH SUBSTRATE AND TITLE 3 INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSYLHOMOCYSTEINASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE, ADOHCYASE; COMPND 5 EC: 3.3.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: AHCY, SAHH, RV3248C, MT3346, MTCY20B11.23C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28TEV KEYWDS PROTEIN-SUBSTRATE COMPLEX, DIMER OF DIMERS, NAD BINDING DOMAIN, 37 KEYWDS 2 AMINO ACID INSERTION, SOLVENT ACCESS CHANNEL, STRUCTURAL GENOMICS, KEYWDS 3 TUBERCULOSIS STRUCTURAL GENOMICS CONSORTIUM, TB STRUCTURAL GENOMICS KEYWDS 4 CONSORTIUM, TBSGC, CYTOPLASM, HYDROLASE, NAD, ONE-CARBON METABOLISM, KEYWDS 5 PSI-2, PROTEIN STRUCTURE INITIATIVE EXPDTA X-RAY DIFFRACTION AUTHOR N.D.SHETTY,T.R.IOERGER,K.GOKULAN,M.C.M.REDDY,J.L.OWEN, AUTHOR 2 J.C.SACCHETTINI,TB STRUCTURAL GENOMICS CONSORTIUM (TBSGC) REVDAT 6 30-AUG-23 3DHY 1 REMARK REVDAT 5 19-MAY-10 3DHY 1 COMPND REVDAT 4 09-JUN-09 3DHY 1 REVDAT REVDAT 3 24-FEB-09 3DHY 1 VERSN REVDAT 2 13-JAN-09 3DHY 1 JRNL REVDAT 1 09-SEP-08 3DHY 0 JRNL AUTH M.C.REDDY,G.KUPPAN,N.D.SHETTY,J.L.OWEN,T.R.IOERGER, JRNL AUTH 2 J.C.SACCHETTINI JRNL TITL CRYSTAL STRUCTURES OF MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE IN TERNARY COMPLEX WITH JRNL TITL 3 SUBSTRATE AND INHIBITORS. JRNL REF PROTEIN SCI. V. 17 2134 2008 JRNL REFN ISSN 0961-8368 JRNL PMID 18815415 JRNL DOI 10.1110/PS.038125.108 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 82.5 REMARK 3 NUMBER OF REFLECTIONS : 108886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.264 REMARK 3 R VALUE (WORKING SET) : 0.260 REMARK 3 FREE R VALUE : 0.340 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5714 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8634 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.29 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 441 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 14998 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 260 REMARK 3 SOLVENT ATOMS : 350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.23000 REMARK 3 B22 (A**2) : 1.87000 REMARK 3 B33 (A**2) : -0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.75000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.327 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.279 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.209 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.529 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.883 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 15586 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 21184 ; 1.628 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1937 ; 6.514 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 692 ;35.439 ;24.798 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2601 ;16.450 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 84 ;18.852 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2369 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 11752 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 7106 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 10526 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 556 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 29 ; 0.195 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.140 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 9868 ; 3.961 ; 5.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 15444 ; 5.006 ; 7.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6544 ; 6.903 ; 9.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5740 ; 8.206 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DHY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000048059. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 384395 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 99.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 58.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.30900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 3.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.67700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: 3CE6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1 M TRIS PH 8.5, 25% REMARK 280 W/V PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.5K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 55.84500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 62080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -122.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLY A 3 REMARK 465 ASN A 4 REMARK 465 LEU A 5 REMARK 465 VAL A 6 REMARK 465 THR A 7 REMARK 465 LYS A 8 REMARK 465 ASN A 9 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLY B 3 REMARK 465 ASN B 4 REMARK 465 LEU B 5 REMARK 465 VAL B 6 REMARK 465 THR B 7 REMARK 465 LYS B 8 REMARK 465 ASN B 9 REMARK 465 SER B 10 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 GLY C 3 REMARK 465 ASN C 4 REMARK 465 LEU C 5 REMARK 465 VAL C 6 REMARK 465 THR C 7 REMARK 465 LYS C 8 REMARK 465 ASN C 9 REMARK 465 SER C 10 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 GLY D 3 REMARK 465 ASN D 4 REMARK 465 LEU D 5 REMARK 465 VAL D 6 REMARK 465 THR D 7 REMARK 465 LYS D 8 REMARK 465 ASN D 9 REMARK 465 SER D 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU C 305 O2B NAD C 550 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 290 CB CYS A 290 SG -0.097 REMARK 500 GLU B 305 CG GLU B 305 CD -0.094 REMARK 500 LYS C 207 CD LYS C 207 CE 0.228 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO C 450 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 22 107.37 -160.29 REMARK 500 GLN A 57 67.97 60.02 REMARK 500 HIS A 69 138.96 -30.99 REMARK 500 MET A 70 78.61 -101.71 REMARK 500 PRO A 184 134.97 -39.85 REMARK 500 PHE A 251 -33.39 -134.43 REMARK 500 ALA A 337 43.62 -142.67 REMARK 500 PHE A 364 -124.23 35.27 REMARK 500 LEU A 407 107.92 -46.87 REMARK 500 ALA A 413 -140.77 -129.27 REMARK 500 ARG B 16 110.66 -164.17 REMARK 500 LYS B 22 102.82 -169.35 REMARK 500 MET B 43 65.14 -113.97 REMARK 500 HIS B 69 129.86 -37.37 REMARK 500 LYS B 248 -71.90 -89.03 REMARK 500 PHE B 251 -45.96 -130.37 REMARK 500 TYR B 283 48.59 -143.16 REMARK 500 ALA B 337 41.18 -144.13 REMARK 500 PHE B 364 -142.47 47.50 REMARK 500 ALA B 413 -141.46 -140.97 REMARK 500 PRO B 487 152.66 -49.83 REMARK 500 ASN C 17 45.64 32.49 REMARK 500 LYS C 22 102.56 -170.45 REMARK 500 HIS C 69 120.79 -26.77 REMARK 500 LYS C 248 -71.19 -97.02 REMARK 500 PHE C 251 -61.50 -122.38 REMARK 500 PHE C 364 -116.31 31.49 REMARK 500 ASP C 365 18.18 -156.49 REMARK 500 SER C 403 27.65 41.21 REMARK 500 LEU C 407 109.57 -49.71 REMARK 500 ALA C 413 -148.76 -123.96 REMARK 500 ASN C 444 49.65 -97.95 REMARK 500 ASN D 17 52.17 31.61 REMARK 500 ASP D 25 118.98 -160.67 REMARK 500 LEU D 68 132.67 -173.06 REMARK 500 HIS D 69 126.52 -35.39 REMARK 500 PRO D 146 -2.81 -57.93 REMARK 500 LYS D 148 68.06 -119.89 REMARK 500 PRO D 149 -179.87 -63.28 REMARK 500 LYS D 248 -71.41 -107.42 REMARK 500 PHE D 251 -60.64 -121.53 REMARK 500 ASP D 252 -75.46 -54.29 REMARK 500 LYS D 254 -66.00 -95.22 REMARK 500 ALA D 337 31.45 -142.51 REMARK 500 PHE D 364 -115.83 43.67 REMARK 500 ASP D 365 17.87 -154.96 REMARK 500 ASP D 369 68.45 -68.62 REMARK 500 PRO D 385 130.46 -39.87 REMARK 500 GLN D 386 12.02 52.01 REMARK 500 LEU D 407 113.48 -32.72 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DH A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DH B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DH C 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD C 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DH D 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD D 550 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RV3248C RELATED DB: TARGETDB REMARK 900 RELATED ID: 2ZJ0 RELATED DB: PDB REMARK 900 RELATED ID: 2ZJ1 RELATED DB: PDB REMARK 900 RELATED ID: 2ZIZ RELATED DB: PDB REMARK 900 RELATED ID: 3CE6 RELATED DB: PDB DBREF 3DHY A 1 495 UNP P60176 SAHH_MYCTU 1 495 DBREF 3DHY B 1 495 UNP P60176 SAHH_MYCTU 1 495 DBREF 3DHY C 1 495 UNP P60176 SAHH_MYCTU 1 495 DBREF 3DHY D 1 495 UNP P60176 SAHH_MYCTU 1 495 SEQRES 1 A 495 MET THR GLY ASN LEU VAL THR LYS ASN SER LEU THR PRO SEQRES 2 A 495 ASP VAL ARG ASN GLY ILE ASP PHE LYS ILE ALA ASP LEU SEQRES 3 A 495 SER LEU ALA ASP PHE GLY ARG LYS GLU LEU ARG ILE ALA SEQRES 4 A 495 GLU HIS GLU MET PRO GLY LEU MET SER LEU ARG ARG GLU SEQRES 5 A 495 TYR ALA GLU VAL GLN PRO LEU LYS GLY ALA ARG ILE SER SEQRES 6 A 495 GLY SER LEU HIS MET THR VAL GLN THR ALA VAL LEU ILE SEQRES 7 A 495 GLU THR LEU THR ALA LEU GLY ALA GLU VAL ARG TRP ALA SEQRES 8 A 495 SER CYS ASN ILE PHE SER THR GLN ASP HIS ALA ALA ALA SEQRES 9 A 495 ALA VAL VAL VAL GLY PRO HIS GLY THR PRO ASP GLU PRO SEQRES 10 A 495 LYS GLY VAL PRO VAL PHE ALA TRP LYS GLY GLU THR LEU SEQRES 11 A 495 GLU GLU TYR TRP TRP ALA ALA GLU GLN MET LEU THR TRP SEQRES 12 A 495 PRO ASP PRO ASP LYS PRO ALA ASN MET ILE LEU ASP ASP SEQRES 13 A 495 GLY GLY ASP ALA THR MET LEU VAL LEU ARG GLY MET GLN SEQRES 14 A 495 TYR GLU LYS ALA GLY VAL VAL PRO PRO ALA GLU GLU ASP SEQRES 15 A 495 ASP PRO ALA GLU TRP LYS VAL PHE LEU ASN LEU LEU ARG SEQRES 16 A 495 THR ARG PHE GLU THR ASP LYS ASP LYS TRP THR LYS ILE SEQRES 17 A 495 ALA GLU SER VAL LYS GLY VAL THR GLU GLU THR THR THR SEQRES 18 A 495 GLY VAL LEU ARG LEU TYR GLN PHE ALA ALA ALA GLY ASP SEQRES 19 A 495 LEU ALA PHE PRO ALA ILE ASN VAL ASN ASP SER VAL THR SEQRES 20 A 495 LYS SER LYS PHE ASP ASN LYS TYR GLY THR ARG HIS SER SEQRES 21 A 495 LEU ILE ASP GLY ILE ASN ARG GLY THR ASP ALA LEU ILE SEQRES 22 A 495 GLY GLY LYS LYS VAL LEU ILE CYS GLY TYR GLY ASP VAL SEQRES 23 A 495 GLY LYS GLY CYS ALA GLU ALA MET LYS GLY GLN GLY ALA SEQRES 24 A 495 ARG VAL SER VAL THR GLU ILE ASP PRO ILE ASN ALA LEU SEQRES 25 A 495 GLN ALA MET MET GLU GLY PHE ASP VAL VAL THR VAL GLU SEQRES 26 A 495 GLU ALA ILE GLY ASP ALA ASP ILE VAL VAL THR ALA THR SEQRES 27 A 495 GLY ASN LYS ASP ILE ILE MET LEU GLU HIS ILE LYS ALA SEQRES 28 A 495 MET LYS ASP HIS ALA ILE LEU GLY ASN ILE GLY HIS PHE SEQRES 29 A 495 ASP ASN GLU ILE ASP MET ALA GLY LEU GLU ARG SER GLY SEQRES 30 A 495 ALA THR ARG VAL ASN VAL LYS PRO GLN VAL ASP LEU TRP SEQRES 31 A 495 THR PHE GLY ASP THR GLY ARG SER ILE ILE VAL LEU SER SEQRES 32 A 495 GLU GLY ARG LEU LEU ASN LEU GLY ASN ALA THR GLY HIS SEQRES 33 A 495 PRO SER PHE VAL MET SER ASN SER PHE ALA ASN GLN THR SEQRES 34 A 495 ILE ALA GLN ILE GLU LEU TRP THR LYS ASN ASP GLU TYR SEQRES 35 A 495 ASP ASN GLU VAL TYR ARG LEU PRO LYS HIS LEU ASP GLU SEQRES 36 A 495 LYS VAL ALA ARG ILE HIS VAL GLU ALA LEU GLY GLY HIS SEQRES 37 A 495 LEU THR LYS LEU THR LYS GLU GLN ALA GLU TYR LEU GLY SEQRES 38 A 495 VAL ASP VAL GLU GLY PRO TYR LYS PRO ASP HIS TYR ARG SEQRES 39 A 495 TYR SEQRES 1 B 495 MET THR GLY ASN LEU VAL THR LYS ASN SER LEU THR PRO SEQRES 2 B 495 ASP VAL ARG ASN GLY ILE ASP PHE LYS ILE ALA ASP LEU SEQRES 3 B 495 SER LEU ALA ASP PHE GLY ARG LYS GLU LEU ARG ILE ALA SEQRES 4 B 495 GLU HIS GLU MET PRO GLY LEU MET SER LEU ARG ARG GLU SEQRES 5 B 495 TYR ALA GLU VAL GLN PRO LEU LYS GLY ALA ARG ILE SER SEQRES 6 B 495 GLY SER LEU HIS MET THR VAL GLN THR ALA VAL LEU ILE SEQRES 7 B 495 GLU THR LEU THR ALA LEU GLY ALA GLU VAL ARG TRP ALA SEQRES 8 B 495 SER CYS ASN ILE PHE SER THR GLN ASP HIS ALA ALA ALA SEQRES 9 B 495 ALA VAL VAL VAL GLY PRO HIS GLY THR PRO ASP GLU PRO SEQRES 10 B 495 LYS GLY VAL PRO VAL PHE ALA TRP LYS GLY GLU THR LEU SEQRES 11 B 495 GLU GLU TYR TRP TRP ALA ALA GLU GLN MET LEU THR TRP SEQRES 12 B 495 PRO ASP PRO ASP LYS PRO ALA ASN MET ILE LEU ASP ASP SEQRES 13 B 495 GLY GLY ASP ALA THR MET LEU VAL LEU ARG GLY MET GLN SEQRES 14 B 495 TYR GLU LYS ALA GLY VAL VAL PRO PRO ALA GLU GLU ASP SEQRES 15 B 495 ASP PRO ALA GLU TRP LYS VAL PHE LEU ASN LEU LEU ARG SEQRES 16 B 495 THR ARG PHE GLU THR ASP LYS ASP LYS TRP THR LYS ILE SEQRES 17 B 495 ALA GLU SER VAL LYS GLY VAL THR GLU GLU THR THR THR SEQRES 18 B 495 GLY VAL LEU ARG LEU TYR GLN PHE ALA ALA ALA GLY ASP SEQRES 19 B 495 LEU ALA PHE PRO ALA ILE ASN VAL ASN ASP SER VAL THR SEQRES 20 B 495 LYS SER LYS PHE ASP ASN LYS TYR GLY THR ARG HIS SER SEQRES 21 B 495 LEU ILE ASP GLY ILE ASN ARG GLY THR ASP ALA LEU ILE SEQRES 22 B 495 GLY GLY LYS LYS VAL LEU ILE CYS GLY TYR GLY ASP VAL SEQRES 23 B 495 GLY LYS GLY CYS ALA GLU ALA MET LYS GLY GLN GLY ALA SEQRES 24 B 495 ARG VAL SER VAL THR GLU ILE ASP PRO ILE ASN ALA LEU SEQRES 25 B 495 GLN ALA MET MET GLU GLY PHE ASP VAL VAL THR VAL GLU SEQRES 26 B 495 GLU ALA ILE GLY ASP ALA ASP ILE VAL VAL THR ALA THR SEQRES 27 B 495 GLY ASN LYS ASP ILE ILE MET LEU GLU HIS ILE LYS ALA SEQRES 28 B 495 MET LYS ASP HIS ALA ILE LEU GLY ASN ILE GLY HIS PHE SEQRES 29 B 495 ASP ASN GLU ILE ASP MET ALA GLY LEU GLU ARG SER GLY SEQRES 30 B 495 ALA THR ARG VAL ASN VAL LYS PRO GLN VAL ASP LEU TRP SEQRES 31 B 495 THR PHE GLY ASP THR GLY ARG SER ILE ILE VAL LEU SER SEQRES 32 B 495 GLU GLY ARG LEU LEU ASN LEU GLY ASN ALA THR GLY HIS SEQRES 33 B 495 PRO SER PHE VAL MET SER ASN SER PHE ALA ASN GLN THR SEQRES 34 B 495 ILE ALA GLN ILE GLU LEU TRP THR LYS ASN ASP GLU TYR SEQRES 35 B 495 ASP ASN GLU VAL TYR ARG LEU PRO LYS HIS LEU ASP GLU SEQRES 36 B 495 LYS VAL ALA ARG ILE HIS VAL GLU ALA LEU GLY GLY HIS SEQRES 37 B 495 LEU THR LYS LEU THR LYS GLU GLN ALA GLU TYR LEU GLY SEQRES 38 B 495 VAL ASP VAL GLU GLY PRO TYR LYS PRO ASP HIS TYR ARG SEQRES 39 B 495 TYR SEQRES 1 C 495 MET THR GLY ASN LEU VAL THR LYS ASN SER LEU THR PRO SEQRES 2 C 495 ASP VAL ARG ASN GLY ILE ASP PHE LYS ILE ALA ASP LEU SEQRES 3 C 495 SER LEU ALA ASP PHE GLY ARG LYS GLU LEU ARG ILE ALA SEQRES 4 C 495 GLU HIS GLU MET PRO GLY LEU MET SER LEU ARG ARG GLU SEQRES 5 C 495 TYR ALA GLU VAL GLN PRO LEU LYS GLY ALA ARG ILE SER SEQRES 6 C 495 GLY SER LEU HIS MET THR VAL GLN THR ALA VAL LEU ILE SEQRES 7 C 495 GLU THR LEU THR ALA LEU GLY ALA GLU VAL ARG TRP ALA SEQRES 8 C 495 SER CYS ASN ILE PHE SER THR GLN ASP HIS ALA ALA ALA SEQRES 9 C 495 ALA VAL VAL VAL GLY PRO HIS GLY THR PRO ASP GLU PRO SEQRES 10 C 495 LYS GLY VAL PRO VAL PHE ALA TRP LYS GLY GLU THR LEU SEQRES 11 C 495 GLU GLU TYR TRP TRP ALA ALA GLU GLN MET LEU THR TRP SEQRES 12 C 495 PRO ASP PRO ASP LYS PRO ALA ASN MET ILE LEU ASP ASP SEQRES 13 C 495 GLY GLY ASP ALA THR MET LEU VAL LEU ARG GLY MET GLN SEQRES 14 C 495 TYR GLU LYS ALA GLY VAL VAL PRO PRO ALA GLU GLU ASP SEQRES 15 C 495 ASP PRO ALA GLU TRP LYS VAL PHE LEU ASN LEU LEU ARG SEQRES 16 C 495 THR ARG PHE GLU THR ASP LYS ASP LYS TRP THR LYS ILE SEQRES 17 C 495 ALA GLU SER VAL LYS GLY VAL THR GLU GLU THR THR THR SEQRES 18 C 495 GLY VAL LEU ARG LEU TYR GLN PHE ALA ALA ALA GLY ASP SEQRES 19 C 495 LEU ALA PHE PRO ALA ILE ASN VAL ASN ASP SER VAL THR SEQRES 20 C 495 LYS SER LYS PHE ASP ASN LYS TYR GLY THR ARG HIS SER SEQRES 21 C 495 LEU ILE ASP GLY ILE ASN ARG GLY THR ASP ALA LEU ILE SEQRES 22 C 495 GLY GLY LYS LYS VAL LEU ILE CYS GLY TYR GLY ASP VAL SEQRES 23 C 495 GLY LYS GLY CYS ALA GLU ALA MET LYS GLY GLN GLY ALA SEQRES 24 C 495 ARG VAL SER VAL THR GLU ILE ASP PRO ILE ASN ALA LEU SEQRES 25 C 495 GLN ALA MET MET GLU GLY PHE ASP VAL VAL THR VAL GLU SEQRES 26 C 495 GLU ALA ILE GLY ASP ALA ASP ILE VAL VAL THR ALA THR SEQRES 27 C 495 GLY ASN LYS ASP ILE ILE MET LEU GLU HIS ILE LYS ALA SEQRES 28 C 495 MET LYS ASP HIS ALA ILE LEU GLY ASN ILE GLY HIS PHE SEQRES 29 C 495 ASP ASN GLU ILE ASP MET ALA GLY LEU GLU ARG SER GLY SEQRES 30 C 495 ALA THR ARG VAL ASN VAL LYS PRO GLN VAL ASP LEU TRP SEQRES 31 C 495 THR PHE GLY ASP THR GLY ARG SER ILE ILE VAL LEU SER SEQRES 32 C 495 GLU GLY ARG LEU LEU ASN LEU GLY ASN ALA THR GLY HIS SEQRES 33 C 495 PRO SER PHE VAL MET SER ASN SER PHE ALA ASN GLN THR SEQRES 34 C 495 ILE ALA GLN ILE GLU LEU TRP THR LYS ASN ASP GLU TYR SEQRES 35 C 495 ASP ASN GLU VAL TYR ARG LEU PRO LYS HIS LEU ASP GLU SEQRES 36 C 495 LYS VAL ALA ARG ILE HIS VAL GLU ALA LEU GLY GLY HIS SEQRES 37 C 495 LEU THR LYS LEU THR LYS GLU GLN ALA GLU TYR LEU GLY SEQRES 38 C 495 VAL ASP VAL GLU GLY PRO TYR LYS PRO ASP HIS TYR ARG SEQRES 39 C 495 TYR SEQRES 1 D 495 MET THR GLY ASN LEU VAL THR LYS ASN SER LEU THR PRO SEQRES 2 D 495 ASP VAL ARG ASN GLY ILE ASP PHE LYS ILE ALA ASP LEU SEQRES 3 D 495 SER LEU ALA ASP PHE GLY ARG LYS GLU LEU ARG ILE ALA SEQRES 4 D 495 GLU HIS GLU MET PRO GLY LEU MET SER LEU ARG ARG GLU SEQRES 5 D 495 TYR ALA GLU VAL GLN PRO LEU LYS GLY ALA ARG ILE SER SEQRES 6 D 495 GLY SER LEU HIS MET THR VAL GLN THR ALA VAL LEU ILE SEQRES 7 D 495 GLU THR LEU THR ALA LEU GLY ALA GLU VAL ARG TRP ALA SEQRES 8 D 495 SER CYS ASN ILE PHE SER THR GLN ASP HIS ALA ALA ALA SEQRES 9 D 495 ALA VAL VAL VAL GLY PRO HIS GLY THR PRO ASP GLU PRO SEQRES 10 D 495 LYS GLY VAL PRO VAL PHE ALA TRP LYS GLY GLU THR LEU SEQRES 11 D 495 GLU GLU TYR TRP TRP ALA ALA GLU GLN MET LEU THR TRP SEQRES 12 D 495 PRO ASP PRO ASP LYS PRO ALA ASN MET ILE LEU ASP ASP SEQRES 13 D 495 GLY GLY ASP ALA THR MET LEU VAL LEU ARG GLY MET GLN SEQRES 14 D 495 TYR GLU LYS ALA GLY VAL VAL PRO PRO ALA GLU GLU ASP SEQRES 15 D 495 ASP PRO ALA GLU TRP LYS VAL PHE LEU ASN LEU LEU ARG SEQRES 16 D 495 THR ARG PHE GLU THR ASP LYS ASP LYS TRP THR LYS ILE SEQRES 17 D 495 ALA GLU SER VAL LYS GLY VAL THR GLU GLU THR THR THR SEQRES 18 D 495 GLY VAL LEU ARG LEU TYR GLN PHE ALA ALA ALA GLY ASP SEQRES 19 D 495 LEU ALA PHE PRO ALA ILE ASN VAL ASN ASP SER VAL THR SEQRES 20 D 495 LYS SER LYS PHE ASP ASN LYS TYR GLY THR ARG HIS SER SEQRES 21 D 495 LEU ILE ASP GLY ILE ASN ARG GLY THR ASP ALA LEU ILE SEQRES 22 D 495 GLY GLY LYS LYS VAL LEU ILE CYS GLY TYR GLY ASP VAL SEQRES 23 D 495 GLY LYS GLY CYS ALA GLU ALA MET LYS GLY GLN GLY ALA SEQRES 24 D 495 ARG VAL SER VAL THR GLU ILE ASP PRO ILE ASN ALA LEU SEQRES 25 D 495 GLN ALA MET MET GLU GLY PHE ASP VAL VAL THR VAL GLU SEQRES 26 D 495 GLU ALA ILE GLY ASP ALA ASP ILE VAL VAL THR ALA THR SEQRES 27 D 495 GLY ASN LYS ASP ILE ILE MET LEU GLU HIS ILE LYS ALA SEQRES 28 D 495 MET LYS ASP HIS ALA ILE LEU GLY ASN ILE GLY HIS PHE SEQRES 29 D 495 ASP ASN GLU ILE ASP MET ALA GLY LEU GLU ARG SER GLY SEQRES 30 D 495 ALA THR ARG VAL ASN VAL LYS PRO GLN VAL ASP LEU TRP SEQRES 31 D 495 THR PHE GLY ASP THR GLY ARG SER ILE ILE VAL LEU SER SEQRES 32 D 495 GLU GLY ARG LEU LEU ASN LEU GLY ASN ALA THR GLY HIS SEQRES 33 D 495 PRO SER PHE VAL MET SER ASN SER PHE ALA ASN GLN THR SEQRES 34 D 495 ILE ALA GLN ILE GLU LEU TRP THR LYS ASN ASP GLU TYR SEQRES 35 D 495 ASP ASN GLU VAL TYR ARG LEU PRO LYS HIS LEU ASP GLU SEQRES 36 D 495 LYS VAL ALA ARG ILE HIS VAL GLU ALA LEU GLY GLY HIS SEQRES 37 D 495 LEU THR LYS LEU THR LYS GLU GLN ALA GLU TYR LEU GLY SEQRES 38 D 495 VAL ASP VAL GLU GLY PRO TYR LYS PRO ASP HIS TYR ARG SEQRES 39 D 495 TYR HET 3DH A 500 21 HET NAD A 550 44 HET 3DH B 500 21 HET NAD B 550 44 HET 3DH C 500 21 HET NAD C 550 44 HET 3DH D 500 21 HET NAD D 550 44 HETNAM 3DH 5'-S-ETHYL-5'-THIOADENOSINE HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETSYN 3DH S-ADENOSYLETHANE FORMUL 5 3DH 4(C12 H17 N5 O3 S) FORMUL 6 NAD 4(C21 H27 N7 O14 P2) FORMUL 13 HOH *350(H2 O) HELIX 1 1 ASP A 25 SER A 27 5 3 HELIX 2 2 LEU A 28 GLU A 42 1 15 HELIX 3 3 MET A 43 ALA A 54 1 12 HELIX 4 4 THR A 71 LEU A 84 1 14 HELIX 5 5 GLN A 99 GLY A 109 1 11 HELIX 6 6 THR A 129 THR A 142 1 14 HELIX 7 7 GLY A 158 GLY A 174 1 17 HELIX 8 8 PRO A 184 ASP A 201 1 18 HELIX 9 9 ASP A 203 VAL A 212 1 10 HELIX 10 10 THR A 219 ALA A 232 1 14 HELIX 11 11 SER A 245 LYS A 250 1 6 HELIX 12 12 LYS A 254 THR A 269 1 16 HELIX 13 13 GLY A 284 GLN A 297 1 14 HELIX 14 14 ASP A 307 GLU A 317 1 11 HELIX 15 15 THR A 323 ILE A 328 1 6 HELIX 16 16 GLY A 329 ALA A 331 5 3 HELIX 17 17 MET A 345 MET A 352 1 8 HELIX 18 18 ASP A 369 ARG A 375 1 7 HELIX 19 19 GLU A 404 ARG A 406 5 3 HELIX 20 20 LEU A 407 ALA A 413 1 7 HELIX 21 21 PRO A 417 LYS A 438 1 22 HELIX 22 22 ASN A 439 TYR A 442 5 4 HELIX 23 23 PRO A 450 GLY A 466 1 17 HELIX 24 24 THR A 473 GLY A 481 1 9 HELIX 25 25 ASP B 25 SER B 27 5 3 HELIX 26 26 LEU B 28 HIS B 41 1 14 HELIX 27 27 MET B 43 TYR B 53 1 11 HELIX 28 28 THR B 71 LEU B 84 1 14 HELIX 29 29 GLN B 99 GLY B 109 1 11 HELIX 30 30 THR B 129 THR B 142 1 14 HELIX 31 31 GLY B 158 LYS B 172 1 15 HELIX 32 32 PRO B 184 GLU B 199 1 16 HELIX 33 33 ASP B 203 GLU B 210 1 8 HELIX 34 34 THR B 219 GLY B 233 1 15 HELIX 35 35 SER B 245 LYS B 250 1 6 HELIX 36 36 LYS B 254 THR B 269 1 16 HELIX 37 37 GLY B 284 GLN B 297 1 14 HELIX 38 38 ASP B 307 GLU B 317 1 11 HELIX 39 39 THR B 323 ILE B 328 1 6 HELIX 40 40 GLY B 329 ALA B 331 5 3 HELIX 41 41 MET B 345 LYS B 350 1 6 HELIX 42 42 ASP B 369 ARG B 375 1 7 HELIX 43 43 GLU B 404 ARG B 406 5 3 HELIX 44 44 LEU B 407 ASN B 412 1 6 HELIX 45 45 PRO B 417 LYS B 438 1 22 HELIX 46 46 ASN B 439 TYR B 442 5 4 HELIX 47 47 PRO B 450 GLY B 466 1 17 HELIX 48 48 THR B 473 GLY B 481 1 9 HELIX 49 49 ASP C 25 SER C 27 5 3 HELIX 50 50 LEU C 28 HIS C 41 1 14 HELIX 51 51 MET C 43 TYR C 53 1 11 HELIX 52 52 THR C 71 LEU C 84 1 14 HELIX 53 53 GLN C 99 GLY C 109 1 11 HELIX 54 54 THR C 129 THR C 142 1 14 HELIX 55 55 GLY C 158 GLY C 174 1 17 HELIX 56 56 PRO C 184 ASP C 201 1 18 HELIX 57 57 ASP C 203 VAL C 212 1 10 HELIX 58 58 THR C 219 ALA C 232 1 14 HELIX 59 59 SER C 245 LYS C 250 1 6 HELIX 60 60 PHE C 251 THR C 269 1 19 HELIX 61 61 GLY C 284 GLN C 297 1 14 HELIX 62 62 ASP C 307 MET C 316 1 10 HELIX 63 63 THR C 323 ILE C 328 1 6 HELIX 64 64 GLY C 329 ALA C 331 5 3 HELIX 65 65 MET C 345 MET C 352 1 8 HELIX 66 66 ASP C 369 ARG C 375 1 7 HELIX 67 67 GLU C 404 ARG C 406 5 3 HELIX 68 68 LEU C 407 ASN C 412 1 6 HELIX 69 69 PRO C 417 LYS C 438 1 22 HELIX 70 70 ASN C 439 TYR C 442 5 4 HELIX 71 71 PRO C 450 GLY C 466 1 17 HELIX 72 72 THR C 473 GLY C 481 1 9 HELIX 73 73 ASP D 25 SER D 27 5 3 HELIX 74 74 LEU D 28 GLU D 42 1 15 HELIX 75 75 MET D 43 ALA D 54 1 12 HELIX 76 76 THR D 71 LEU D 84 1 14 HELIX 77 77 GLN D 99 GLY D 109 1 11 HELIX 78 78 THR D 129 THR D 142 1 14 HELIX 79 79 GLY D 158 GLY D 174 1 17 HELIX 80 80 PRO D 184 GLU D 199 1 16 HELIX 81 81 ASP D 203 VAL D 212 1 10 HELIX 82 82 THR D 219 ALA D 232 1 14 HELIX 83 83 SER D 245 LYS D 250 1 6 HELIX 84 84 PHE D 251 THR D 269 1 19 HELIX 85 85 GLY D 284 GLY D 296 1 13 HELIX 86 86 ASP D 307 MET D 316 1 10 HELIX 87 87 THR D 323 ILE D 328 1 6 HELIX 88 88 GLY D 329 ALA D 331 5 3 HELIX 89 89 MET D 345 MET D 352 1 8 HELIX 90 90 ASP D 369 SER D 376 1 8 HELIX 91 91 GLU D 404 ARG D 406 5 3 HELIX 92 92 LEU D 407 ASN D 412 1 6 HELIX 93 93 PRO D 417 LYS D 438 1 22 HELIX 94 94 ASN D 439 TYR D 442 5 4 HELIX 95 95 PRO D 450 GLY D 466 1 17 HELIX 96 96 THR D 473 GLY D 481 1 9 SHEET 1 A 9 ASP A 14 ARG A 16 0 SHEET 2 A 9 ILE A 19 ILE A 23 -1 O ILE A 19 N ARG A 16 SHEET 3 A 9 VAL A 122 ALA A 124 1 O VAL A 122 N LYS A 22 SHEET 4 A 9 GLU A 87 ALA A 91 1 N TRP A 90 O PHE A 123 SHEET 5 A 9 ARG A 63 SER A 67 1 N ILE A 64 O GLU A 87 SHEET 6 A 9 MET A 152 ASP A 155 1 O LEU A 154 N SER A 67 SHEET 7 A 9 VAL A 215 GLU A 217 1 O THR A 216 N ASP A 155 SHEET 8 A 9 ALA A 239 ASN A 241 1 O ILE A 240 N VAL A 215 SHEET 9 A 9 VAL A 446 TYR A 447 1 O TYR A 447 N ASN A 241 SHEET 1 B 8 ASP A 320 VAL A 321 0 SHEET 2 B 8 ARG A 300 THR A 304 1 N VAL A 303 O ASP A 320 SHEET 3 B 8 LYS A 277 CYS A 281 1 N VAL A 278 O ARG A 300 SHEET 4 B 8 ILE A 333 THR A 336 1 O VAL A 335 N LEU A 279 SHEET 5 B 8 ALA A 356 ASN A 360 1 O ILE A 357 N VAL A 334 SHEET 6 B 8 SER A 398 LEU A 402 1 O ILE A 400 N LEU A 358 SHEET 7 B 8 VAL A 387 THR A 391 -1 N ASP A 388 O VAL A 401 SHEET 8 B 8 THR A 379 LYS A 384 -1 N THR A 379 O THR A 391 SHEET 1 C 2 ASP B 14 ARG B 16 0 SHEET 2 C 2 ILE B 19 PHE B 21 -1 O PHE B 21 N ASP B 14 SHEET 1 D 7 VAL B 122 PHE B 123 0 SHEET 2 D 7 GLU B 87 ALA B 91 1 N TRP B 90 O PHE B 123 SHEET 3 D 7 ARG B 63 SER B 67 1 N GLY B 66 O ARG B 89 SHEET 4 D 7 MET B 152 ASP B 155 1 O LEU B 154 N SER B 67 SHEET 5 D 7 VAL B 215 GLU B 217 1 O THR B 216 N ASP B 155 SHEET 6 D 7 ALA B 239 ASN B 241 1 O ILE B 240 N GLU B 217 SHEET 7 D 7 VAL B 446 TYR B 447 1 O TYR B 447 N ASN B 241 SHEET 1 E 8 ASP B 320 VAL B 321 0 SHEET 2 E 8 ARG B 300 THR B 304 1 N VAL B 303 O ASP B 320 SHEET 3 E 8 LYS B 277 CYS B 281 1 N ILE B 280 O SER B 302 SHEET 4 E 8 ILE B 333 THR B 336 1 O VAL B 335 N CYS B 281 SHEET 5 E 8 ALA B 356 ASN B 360 1 O ILE B 357 N VAL B 334 SHEET 6 E 8 SER B 398 LEU B 402 1 O ILE B 400 N LEU B 358 SHEET 7 E 8 VAL B 387 THR B 391 -1 N TRP B 390 O ILE B 399 SHEET 8 E 8 THR B 379 LYS B 384 -1 N VAL B 381 O LEU B 389 SHEET 1 F 9 ASP C 14 ARG C 16 0 SHEET 2 F 9 ILE C 19 ILE C 23 -1 O PHE C 21 N ASP C 14 SHEET 3 F 9 VAL C 122 ALA C 124 1 O VAL C 122 N LYS C 22 SHEET 4 F 9 GLU C 87 ALA C 91 1 N TRP C 90 O PHE C 123 SHEET 5 F 9 ARG C 63 SER C 67 1 N ILE C 64 O GLU C 87 SHEET 6 F 9 MET C 152 ASP C 155 1 O LEU C 154 N SER C 67 SHEET 7 F 9 VAL C 215 GLU C 217 1 O THR C 216 N ASP C 155 SHEET 8 F 9 ALA C 239 ASN C 241 1 O ILE C 240 N GLU C 217 SHEET 9 F 9 VAL C 446 TYR C 447 1 O TYR C 447 N ASN C 241 SHEET 1 G 8 ASP C 320 VAL C 321 0 SHEET 2 G 8 ARG C 300 THR C 304 1 N VAL C 303 O ASP C 320 SHEET 3 G 8 LYS C 277 CYS C 281 1 N VAL C 278 O ARG C 300 SHEET 4 G 8 ILE C 333 THR C 336 1 O VAL C 335 N CYS C 281 SHEET 5 G 8 ILE C 357 ASN C 360 1 O GLY C 359 N VAL C 334 SHEET 6 G 8 SER C 398 LEU C 402 1 O ILE C 400 N LEU C 358 SHEET 7 G 8 VAL C 387 THR C 391 -1 N ASP C 388 O VAL C 401 SHEET 8 G 8 THR C 379 LYS C 384 -1 N VAL C 381 O LEU C 389 SHEET 1 H 2 ASP D 14 ARG D 16 0 SHEET 2 H 2 ILE D 19 PHE D 21 -1 O PHE D 21 N ASP D 14 SHEET 1 I 7 VAL D 122 PHE D 123 0 SHEET 2 I 7 GLU D 87 ALA D 91 1 N TRP D 90 O PHE D 123 SHEET 3 I 7 ARG D 63 SER D 67 1 N ILE D 64 O GLU D 87 SHEET 4 I 7 MET D 152 ASP D 155 1 O LEU D 154 N SER D 67 SHEET 5 I 7 VAL D 215 GLU D 217 1 O THR D 216 N ASP D 155 SHEET 6 I 7 ALA D 239 ASN D 241 1 O ILE D 240 N GLU D 217 SHEET 7 I 7 VAL D 446 TYR D 447 1 O TYR D 447 N ASN D 241 SHEET 1 J 8 ASP D 320 VAL D 321 0 SHEET 2 J 8 ARG D 300 THR D 304 1 N VAL D 303 O ASP D 320 SHEET 3 J 8 LYS D 277 CYS D 281 1 N VAL D 278 O ARG D 300 SHEET 4 J 8 ILE D 333 THR D 336 1 O VAL D 335 N LEU D 279 SHEET 5 J 8 ALA D 356 ASN D 360 1 O ILE D 357 N VAL D 334 SHEET 6 J 8 SER D 398 LEU D 402 1 O ILE D 400 N ALA D 356 SHEET 7 J 8 VAL D 387 THR D 391 -1 N ASP D 388 O VAL D 401 SHEET 8 J 8 THR D 379 LYS D 384 -1 N VAL D 381 O LEU D 389 CISPEP 1 GLY A 486 PRO A 487 0 -7.50 CISPEP 2 GLY B 486 PRO B 487 0 -7.89 CISPEP 3 GLY C 486 PRO C 487 0 -0.66 CISPEP 4 GLY D 486 PRO D 487 0 -7.21 SITE 1 AC1 15 HIS A 69 THR A 71 GLN A 73 THR A 74 SITE 2 AC1 15 ASP A 156 GLU A 218 THR A 219 LYS A 248 SITE 3 AC1 15 ASP A 252 LEU A 407 THR A 414 GLY A 415 SITE 4 AC1 15 HIS A 416 MET A 421 PHE A 425 SITE 1 AC2 24 THR A 219 THR A 220 THR A 221 ASN A 253 SITE 2 AC2 24 GLY A 282 GLY A 284 ASP A 285 THR A 304 SITE 3 AC2 24 GLU A 305 ILE A 306 ASN A 310 THR A 338 SITE 4 AC2 24 GLY A 339 ASN A 340 ILE A 343 ILE A 361 SITE 5 AC2 24 GLY A 362 HIS A 363 LEU A 407 ASN A 409 SITE 6 AC2 24 HIS A 416 GLN B 476 LYS B 489 TYR B 493 SITE 1 AC3 14 LEU B 68 HIS B 69 THR B 71 GLN B 73 SITE 2 AC3 14 THR B 74 ASP B 156 GLU B 218 THR B 219 SITE 3 AC3 14 LYS B 248 ASP B 252 GLY B 362 THR B 414 SITE 4 AC3 14 HIS B 416 MET B 421 SITE 1 AC4 25 GLN A 476 LYS A 489 TYR A 493 THR B 219 SITE 2 AC4 25 THR B 220 THR B 221 ASN B 253 GLY B 282 SITE 3 AC4 25 GLY B 284 ASP B 285 THR B 304 GLU B 305 SITE 4 AC4 25 ILE B 306 ASP B 307 ASN B 310 THR B 338 SITE 5 AC4 25 GLY B 339 ASN B 340 ILE B 343 ILE B 361 SITE 6 AC4 25 GLY B 362 HIS B 363 LEU B 407 ASN B 409 SITE 7 AC4 25 HIS B 416 SITE 1 AC5 15 HIS C 69 THR C 71 GLN C 73 THR C 74 SITE 2 AC5 15 ASP C 156 GLU C 218 THR C 219 LYS C 248 SITE 3 AC5 15 ASP C 252 LEU C 407 LEU C 410 THR C 414 SITE 4 AC5 15 HIS C 416 MET C 421 PHE C 425 SITE 1 AC6 22 THR C 219 THR C 220 THR C 221 ASN C 253 SITE 2 AC6 22 GLY C 284 ASP C 285 THR C 304 GLU C 305 SITE 3 AC6 22 ILE C 306 ASP C 307 THR C 338 GLY C 339 SITE 4 AC6 22 ASN C 340 ILE C 343 ILE C 361 GLY C 362 SITE 5 AC6 22 HIS C 363 ASN C 409 HIS C 416 GLN D 476 SITE 6 AC6 22 LYS D 489 TYR D 493 SITE 1 AC7 17 LEU D 68 HIS D 69 THR D 71 GLN D 73 SITE 2 AC7 17 THR D 74 ASP D 156 GLU D 218 THR D 219 SITE 3 AC7 17 LYS D 248 ASP D 252 LEU D 407 LEU D 410 SITE 4 AC7 17 THR D 414 GLY D 415 HIS D 416 MET D 421 SITE 5 AC7 17 PHE D 425 SITE 1 AC8 23 GLN C 476 LYS C 489 TYR C 493 THR D 219 SITE 2 AC8 23 THR D 220 THR D 221 ASN D 253 GLY D 282 SITE 3 AC8 23 GLY D 284 ASP D 285 THR D 304 GLU D 305 SITE 4 AC8 23 ILE D 306 ASP D 307 THR D 338 GLY D 339 SITE 5 AC8 23 ASN D 340 ILE D 343 ILE D 361 GLY D 362 SITE 6 AC8 23 HIS D 363 ASN D 409 HIS D 416 CRYST1 94.200 111.690 100.130 90.00 96.01 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010616 0.000000 0.001118 0.00000 SCALE2 0.000000 0.008953 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010042 0.00000