data_3DIE # _entry.id 3DIE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DIE pdb_00003die 10.2210/pdb3die/pdb RCSB RCSB048075 ? ? WWPDB D_1000048075 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2O7K 'Non mutated protein' unspecified PDB 2O89 'The same protein, P31T/C32S mutant' unspecified PDB 2O87 'The same protein, P31S mutant' unspecified PDB 2O85 'The same protein, P31T mutant' unspecified # _pdbx_database_status.entry_id 3DIE _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-06-20 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Martinez-Rodriguez, S.' 1 'Loris, R.' 2 'Messens, J.' 3 # _citation.id primary _citation.title 'Coupling of domain swapping to kinetic stability in a thioredoxin mutant' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 385 _citation.page_first 1590 _citation.page_last 1599 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19071139 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2008.11.040 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Garcia-Pino, A.' 1 ? primary 'Martinez-Rodriguez, S.' 2 ? primary 'Wahni, K.' 3 ? primary 'Wyns, L.' 4 ? primary 'Loris, R.' 5 ? primary 'Messens, J.' 6 ? # _cell.length_a 88.703 _cell.length_b 84.451 _cell.length_c 34.699 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3DIE _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 3DIE _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 18 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Thioredoxin 11561.218 2 ? ? ? ? 2 non-polymer syn 'CADMIUM ION' 112.411 4 ? ? ? ? 3 non-polymer syn 'FE (III) ION' 55.845 2 ? ? ? ? 4 water nat water 18.015 141 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Trx # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SHMAIVKVTDADFDSKVESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVF KDGQPVDKVVGFQPKENLAEVLDKHL ; _entity_poly.pdbx_seq_one_letter_code_can ;SHMAIVKVTDADFDSKVESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVF KDGQPVDKVVGFQPKENLAEVLDKHL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 HIS n 1 3 MET n 1 4 ALA n 1 5 ILE n 1 6 VAL n 1 7 LYS n 1 8 VAL n 1 9 THR n 1 10 ASP n 1 11 ALA n 1 12 ASP n 1 13 PHE n 1 14 ASP n 1 15 SER n 1 16 LYS n 1 17 VAL n 1 18 GLU n 1 19 SER n 1 20 GLY n 1 21 VAL n 1 22 GLN n 1 23 LEU n 1 24 VAL n 1 25 ASP n 1 26 PHE n 1 27 TRP n 1 28 ALA n 1 29 THR n 1 30 ALA n 1 31 CYS n 1 32 GLY n 1 33 PRO n 1 34 CYS n 1 35 LYS n 1 36 MET n 1 37 ILE n 1 38 ALA n 1 39 PRO n 1 40 VAL n 1 41 LEU n 1 42 GLU n 1 43 GLU n 1 44 LEU n 1 45 ALA n 1 46 ALA n 1 47 ASP n 1 48 TYR n 1 49 GLU n 1 50 GLY n 1 51 LYS n 1 52 ALA n 1 53 ASP n 1 54 ILE n 1 55 LEU n 1 56 LYS n 1 57 LEU n 1 58 ASP n 1 59 VAL n 1 60 ASP n 1 61 GLU n 1 62 ASN n 1 63 PRO n 1 64 SER n 1 65 THR n 1 66 ALA n 1 67 ALA n 1 68 LYS n 1 69 TYR n 1 70 GLU n 1 71 VAL n 1 72 MET n 1 73 SER n 1 74 ILE n 1 75 PRO n 1 76 THR n 1 77 LEU n 1 78 ILE n 1 79 VAL n 1 80 PHE n 1 81 LYS n 1 82 ASP n 1 83 GLY n 1 84 GLN n 1 85 PRO n 1 86 VAL n 1 87 ASP n 1 88 LYS n 1 89 VAL n 1 90 VAL n 1 91 GLY n 1 92 PHE n 1 93 GLN n 1 94 PRO n 1 95 LYS n 1 96 GLU n 1 97 ASN n 1 98 LEU n 1 99 ALA n 1 100 GLU n 1 101 VAL n 1 102 LEU n 1 103 ASP n 1 104 LYS n 1 105 HIS n 1 106 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene trxA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (AI)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET14b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THIO_STAAU _struct_ref.pdbx_db_accession P0A0K6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD GQPVDKVVGFQPKENLAEVLDKHL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DIE A 3 ? 106 ? P0A0K6 1 ? 104 ? 1 104 2 1 3DIE B 3 ? 106 ? P0A0K6 1 ? 104 ? 1 104 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DIE SER A 1 ? UNP P0A0K6 ? ? 'expression tag' -1 1 1 3DIE HIS A 2 ? UNP P0A0K6 ? ? 'expression tag' 0 2 1 3DIE ALA A 30 ? UNP P0A0K6 TRP 28 'engineered mutation' 28 3 2 3DIE SER B 1 ? UNP P0A0K6 ? ? 'expression tag' -1 4 2 3DIE HIS B 2 ? UNP P0A0K6 ? ? 'expression tag' 0 5 2 3DIE ALA B 30 ? UNP P0A0K6 TRP 28 'engineered mutation' 28 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE non-polymer . 'FE (III) ION' ? 'Fe 3' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3DIE _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.81 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 56.23 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;30%(v/v) Polyethylene glycol 400, 0.1M sodium acetate pH 4.6, 0.1M cadmium chloride, vapor diffusion, hanging drop, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2007-04-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8152 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11' _diffrn_source.pdbx_wavelength_list 0.8152 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X11 # _reflns.entry_id 3DIE _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 61.20 _reflns.number_all ? _reflns.number_obs 22762 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.112 _reflns.pdbx_Rsym_value 0.19 _reflns.pdbx_netI_over_sigmaI 11.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3DIE _refine.ls_d_res_high 1.850 _refine.ls_d_res_low 61.200 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.860 _refine.ls_number_reflns_obs 21599 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_R_work 0.192 _refine.ls_R_factor_R_free 0.220 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1163 _refine.B_iso_mean 32.715 _refine.aniso_B[1][1] -0.490 _refine.aniso_B[2][2] 0.240 _refine.aniso_B[3][3] 0.250 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.pdbx_overall_ESU_R 0.122 _refine.pdbx_overall_ESU_R_Free 0.116 _refine.overall_SU_ML 0.080 _refine.overall_SU_B 4.319 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.B_iso_max 113.80 _refine.B_iso_min 11.01 _refine.occupancy_max 1.00 _refine.occupancy_min 0.40 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1539 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 141 _refine_hist.number_atoms_total 1686 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 61.200 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1569 0.013 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2149 1.648 1.971 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 210 20.090 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 55 30.937 26.727 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 231 13.764 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 261 0.118 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1176 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 627 0.223 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1129 0.302 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 114 0.270 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 4 0.353 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 31 0.253 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 17 0.274 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 1 0.571 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1083 1.078 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1705 1.446 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 545 2.606 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 444 4.081 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.850 _refine_ls_shell.d_res_low 1.898 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.940 _refine_ls_shell.number_reflns_R_work 1580 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.220 _refine_ls_shell.R_factor_R_free 0.262 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 89 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1669 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DIE _struct.title 'Domain swapping of Staphylococcus Aureus thioredoxin W28A mutant' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DIE _struct_keywords.text 'ELECTRON TRANSPORT, SWAP DOMAIN, redox enzymology, oxidoreductase, Redox-active center, Transport' _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 12 ? VAL A 17 ? ASP A 10 VAL A 15 1 ? 6 HELX_P HELX_P2 2 CYS A 31 ? TYR A 48 ? CYS A 29 TYR A 46 1 ? 18 HELX_P HELX_P3 3 ASN A 62 ? TYR A 69 ? ASN A 60 TYR A 67 1 ? 8 HELX_P HELX_P4 4 PRO A 94 ? LYS A 104 ? PRO A 92 LYS A 102 1 ? 11 HELX_P HELX_P5 5 ASP B 12 ? VAL B 17 ? ASP B 10 VAL B 15 1 ? 6 HELX_P HELX_P6 6 CYS B 31 ? TYR B 48 ? CYS B 29 TYR B 46 1 ? 18 HELX_P HELX_P7 7 ASN B 62 ? TYR B 69 ? ASN B 60 TYR B 67 1 ? 8 HELX_P HELX_P8 8 PRO B 94 ? LYS B 104 ? PRO B 92 LYS B 102 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 34 SG ? ? A CYS 29 A CYS 32 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf2 disulf ? ? B CYS 31 SG ? ? ? 1_555 B CYS 34 SG ? ? B CYS 29 B CYS 32 1_555 ? ? ? ? ? ? ? 2.034 ? ? metalc1 metalc ? ? A HIS 2 NE2 ? ? ? 1_555 F FE . FE ? ? A HIS 0 A FE 108 1_555 ? ? ? ? ? ? ? 2.347 ? ? metalc2 metalc ? ? A GLU 42 OE1 ? ? ? 1_555 C CD . CD ? ? A GLU 40 A CD 105 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc3 metalc ? ? A GLU 42 OE2 ? ? ? 1_555 C CD . CD ? ? A GLU 40 A CD 105 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc4 metalc ? ? A ASP 82 OD1 ? ? ? 1_555 D CD . CD ? ? A ASP 80 A CD 106 1_555 ? ? ? ? ? ? ? 2.579 ? ? metalc5 metalc ? ? A ASP 82 OD2 ? ? ? 1_555 D CD . CD ? ? A ASP 80 A CD 106 1_555 ? ? ? ? ? ? ? 2.236 ? ? metalc6 metalc ? ? A LEU 106 O ? ? ? 1_555 E CD . CD ? ? A LEU 104 A CD 107 1_555 ? ? ? ? ? ? ? 2.436 ? ? metalc7 metalc ? ? A LEU 106 OXT ? ? ? 1_555 E CD . CD ? ? A LEU 104 A CD 107 1_555 ? ? ? ? ? ? ? 2.402 ? ? metalc8 metalc ? ? D CD . CD ? ? ? 1_555 I HOH . O ? ? A CD 106 A HOH 109 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc9 metalc ? ? D CD . CD ? ? ? 1_555 I HOH . O ? ? A CD 106 A HOH 191 1_555 ? ? ? ? ? ? ? 2.437 ? ? metalc10 metalc ? ? E CD . CD ? ? ? 1_555 I HOH . O ? ? A CD 107 A HOH 187 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc11 metalc ? ? F FE . FE ? ? ? 1_555 I HOH . O ? ? A FE 108 A HOH 189 1_555 ? ? ? ? ? ? ? 2.240 ? ? metalc12 metalc ? ? F FE . FE ? ? ? 1_555 B GLU 43 OE2 ? ? A FE 108 B GLU 41 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc13 metalc ? ? B GLU 43 OE2 ? ? ? 1_555 H FE . FE ? ? B GLU 41 B FE 106 1_555 ? ? ? ? ? ? ? 2.424 ? ? metalc14 metalc ? ? B GLU 49 OE1 ? ? ? 1_555 G CD . CD ? ? B GLU 47 B CD 105 1_555 ? ? ? ? ? ? ? 2.510 ? ? metalc15 metalc ? ? B GLU 49 OE2 ? ? ? 1_555 G CD . CD ? ? B GLU 47 B CD 105 1_555 ? ? ? ? ? ? ? 2.130 ? ? metalc16 metalc ? ? G CD . CD ? ? ? 1_555 J HOH . O ? ? B CD 105 B HOH 198 1_555 ? ? ? ? ? ? ? 1.993 ? ? metalc17 metalc ? ? H FE . FE ? ? ? 1_555 J HOH . O ? ? B FE 106 B HOH 149 1_555 ? ? ? ? ? ? ? 2.440 ? ? metalc18 metalc ? ? H FE . FE ? ? ? 1_555 J HOH . O ? ? B FE 106 B HOH 201 1_555 ? ? ? ? ? ? ? 2.061 ? ? metalc19 metalc ? ? H FE . FE ? ? ? 1_555 J HOH . O ? ? B FE 106 B HOH 202 1_555 ? ? ? ? ? ? ? 1.730 ? ? metalc20 metalc ? ? H FE . FE ? ? ? 1_555 J HOH . O ? ? B FE 106 B HOH 203 1_555 ? ? ? ? ? ? ? 2.130 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 74 A . ? ILE 72 A PRO 75 A ? PRO 73 A 1 1.85 2 ILE 74 B . ? ILE 72 B PRO 75 B ? PRO 73 B 1 -3.78 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 6 ? LYS A 7 ? VAL A 4 LYS A 5 A 2 ALA B 52 ? ASP B 58 ? ALA B 50 ASP B 56 A 3 VAL A 21 ? TRP A 27 ? VAL A 19 TRP A 25 A 4 THR B 76 ? LYS B 81 ? THR B 74 LYS B 79 A 5 GLN B 84 ? VAL B 90 ? GLN B 82 VAL B 88 B 1 GLN A 84 ? VAL A 90 ? GLN A 82 VAL A 88 B 2 THR A 76 ? LYS A 81 ? THR A 74 LYS A 79 B 3 VAL B 21 ? TRP B 27 ? VAL B 19 TRP B 25 B 4 ASP A 53 ? ASP A 58 ? ASP A 51 ASP A 56 B 5 VAL B 6 ? LYS B 7 ? VAL B 4 LYS B 5 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 6 ? N VAL A 4 O LYS B 56 ? O LYS B 54 A 2 3 O LEU B 55 ? O LEU B 53 N LEU A 23 ? N LEU A 21 A 3 4 N GLN A 22 ? N GLN A 20 O PHE B 80 ? O PHE B 78 A 4 5 N VAL B 79 ? N VAL B 77 O VAL B 86 ? O VAL B 84 B 1 2 O ASP A 87 ? O ASP A 85 N VAL A 79 ? N VAL A 77 B 2 3 N PHE A 80 ? N PHE A 78 O GLN B 22 ? O GLN B 20 B 3 4 O LEU B 23 ? O LEU B 21 N LEU A 55 ? N LEU A 53 B 4 5 N LYS A 56 ? N LYS A 54 O VAL B 6 ? O VAL B 4 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CD 105 ? 4 'BINDING SITE FOR RESIDUE CD A 105' AC2 Software A CD 106 ? 4 'BINDING SITE FOR RESIDUE CD A 106' AC3 Software A CD 107 ? 5 'BINDING SITE FOR RESIDUE CD A 107' AC4 Software A FE 108 ? 6 'BINDING SITE FOR RESIDUE FE A 108' AC5 Software B CD 105 ? 4 'BINDING SITE FOR RESIDUE CD B 105' AC6 Software B FE 106 ? 6 'BINDING SITE FOR RESIDUE FE B 106' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLU A 42 ? GLU A 40 . ? 1_555 ? 2 AC1 4 ASP B 82 ? ASP B 80 . ? 3_545 ? 3 AC1 4 HOH J . ? HOH B 154 . ? 3_545 ? 4 AC1 4 HOH J . ? HOH B 164 . ? 3_545 ? 5 AC2 4 ASP A 82 ? ASP A 80 . ? 1_555 ? 6 AC2 4 HOH I . ? HOH A 109 . ? 1_555 ? 7 AC2 4 HOH I . ? HOH A 191 . ? 1_555 ? 8 AC2 4 GLU B 42 ? GLU B 40 . ? 4_556 ? 9 AC3 5 ALA A 11 ? ALA A 9 . ? 4_555 ? 10 AC3 5 ASP A 14 ? ASP A 12 . ? 4_555 ? 11 AC3 5 LEU A 106 ? LEU A 104 . ? 1_555 ? 12 AC3 5 HOH I . ? HOH A 187 . ? 1_555 ? 13 AC3 5 HOH I . ? HOH A 188 . ? 1_555 ? 14 AC4 6 HIS A 2 ? HIS A 0 . ? 1_555 ? 15 AC4 6 HOH I . ? HOH A 162 . ? 4_456 ? 16 AC4 6 HOH I . ? HOH A 176 . ? 4_456 ? 17 AC4 6 HOH I . ? HOH A 189 . ? 1_555 ? 18 AC4 6 GLU B 43 ? GLU B 41 . ? 1_555 ? 19 AC4 6 HOH J . ? HOH B 149 . ? 1_555 ? 20 AC5 4 GLU B 49 ? GLU B 47 . ? 2_565 ? 21 AC5 4 GLU B 49 ? GLU B 47 . ? 1_555 ? 22 AC5 4 HOH J . ? HOH B 198 . ? 1_555 ? 23 AC5 4 HOH J . ? HOH B 198 . ? 2_565 ? 24 AC6 6 GLU A 18 ? GLU A 16 . ? 1_556 ? 25 AC6 6 GLU B 43 ? GLU B 41 . ? 1_555 ? 26 AC6 6 HOH J . ? HOH B 149 . ? 1_555 ? 27 AC6 6 HOH J . ? HOH B 201 . ? 1_555 ? 28 AC6 6 HOH J . ? HOH B 202 . ? 1_555 ? 29 AC6 6 HOH J . ? HOH B 203 . ? 1_555 ? # _atom_sites.entry_id 3DIE _atom_sites.fract_transf_matrix[1][1] 0.011274 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011841 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028819 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CD FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -1 -1 SER SER A . n A 1 2 HIS 2 0 0 HIS HIS A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 ALA 4 2 2 ALA ALA A . n A 1 5 ILE 5 3 3 ILE ILE A . n A 1 6 VAL 6 4 4 VAL VAL A . n A 1 7 LYS 7 5 5 LYS LYS A . n A 1 8 VAL 8 6 6 VAL VAL A . n A 1 9 THR 9 7 7 THR THR A . n A 1 10 ASP 10 8 8 ASP ASP A . n A 1 11 ALA 11 9 9 ALA ALA A . n A 1 12 ASP 12 10 10 ASP ASP A . n A 1 13 PHE 13 11 11 PHE PHE A . n A 1 14 ASP 14 12 12 ASP ASP A . n A 1 15 SER 15 13 13 SER SER A . n A 1 16 LYS 16 14 14 LYS LYS A . n A 1 17 VAL 17 15 15 VAL VAL A . n A 1 18 GLU 18 16 16 GLU GLU A . n A 1 19 SER 19 17 17 SER SER A . n A 1 20 GLY 20 18 18 GLY GLY A . n A 1 21 VAL 21 19 19 VAL VAL A . n A 1 22 GLN 22 20 20 GLN GLN A . n A 1 23 LEU 23 21 21 LEU LEU A . n A 1 24 VAL 24 22 22 VAL VAL A . n A 1 25 ASP 25 23 23 ASP ASP A . n A 1 26 PHE 26 24 24 PHE PHE A . n A 1 27 TRP 27 25 25 TRP TRP A . n A 1 28 ALA 28 26 26 ALA ALA A . n A 1 29 THR 29 27 27 THR THR A . n A 1 30 ALA 30 28 28 ALA ALA A . n A 1 31 CYS 31 29 29 CYS CYS A . n A 1 32 GLY 32 30 30 GLY GLY A . n A 1 33 PRO 33 31 31 PRO PRO A . n A 1 34 CYS 34 32 32 CYS CYS A . n A 1 35 LYS 35 33 33 LYS LYS A . n A 1 36 MET 36 34 34 MET MET A . n A 1 37 ILE 37 35 35 ILE ILE A . n A 1 38 ALA 38 36 36 ALA ALA A . n A 1 39 PRO 39 37 37 PRO PRO A . n A 1 40 VAL 40 38 38 VAL VAL A . n A 1 41 LEU 41 39 39 LEU LEU A . n A 1 42 GLU 42 40 40 GLU GLU A . n A 1 43 GLU 43 41 41 GLU GLU A . n A 1 44 LEU 44 42 42 LEU LEU A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 ALA 46 44 44 ALA ALA A . n A 1 47 ASP 47 45 45 ASP ASP A . n A 1 48 TYR 48 46 46 TYR TYR A . n A 1 49 GLU 49 47 47 GLU GLU A . n A 1 50 GLY 50 48 48 GLY GLY A . n A 1 51 LYS 51 49 49 LYS LYS A . n A 1 52 ALA 52 50 50 ALA ALA A . n A 1 53 ASP 53 51 51 ASP ASP A . n A 1 54 ILE 54 52 52 ILE ILE A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 LYS 56 54 54 LYS LYS A . n A 1 57 LEU 57 55 55 LEU LEU A . n A 1 58 ASP 58 56 56 ASP ASP A . n A 1 59 VAL 59 57 57 VAL VAL A . n A 1 60 ASP 60 58 58 ASP ASP A . n A 1 61 GLU 61 59 59 GLU GLU A . n A 1 62 ASN 62 60 60 ASN ASN A . n A 1 63 PRO 63 61 61 PRO PRO A . n A 1 64 SER 64 62 62 SER SER A . n A 1 65 THR 65 63 63 THR THR A . n A 1 66 ALA 66 64 64 ALA ALA A . n A 1 67 ALA 67 65 65 ALA ALA A . n A 1 68 LYS 68 66 66 LYS LYS A . n A 1 69 TYR 69 67 67 TYR TYR A . n A 1 70 GLU 70 68 68 GLU GLU A . n A 1 71 VAL 71 69 69 VAL VAL A . n A 1 72 MET 72 70 70 MET MET A . n A 1 73 SER 73 71 71 SER SER A . n A 1 74 ILE 74 72 72 ILE ILE A . n A 1 75 PRO 75 73 73 PRO PRO A . n A 1 76 THR 76 74 74 THR THR A . n A 1 77 LEU 77 75 75 LEU LEU A . n A 1 78 ILE 78 76 76 ILE ILE A . n A 1 79 VAL 79 77 77 VAL VAL A . n A 1 80 PHE 80 78 78 PHE PHE A . n A 1 81 LYS 81 79 79 LYS LYS A . n A 1 82 ASP 82 80 80 ASP ASP A . n A 1 83 GLY 83 81 81 GLY GLY A . n A 1 84 GLN 84 82 82 GLN GLN A . n A 1 85 PRO 85 83 83 PRO PRO A . n A 1 86 VAL 86 84 84 VAL VAL A . n A 1 87 ASP 87 85 85 ASP ASP A . n A 1 88 LYS 88 86 86 LYS LYS A . n A 1 89 VAL 89 87 87 VAL VAL A . n A 1 90 VAL 90 88 88 VAL VAL A . n A 1 91 GLY 91 89 89 GLY GLY A . n A 1 92 PHE 92 90 90 PHE PHE A . n A 1 93 GLN 93 91 91 GLN GLN A . n A 1 94 PRO 94 92 92 PRO PRO A . n A 1 95 LYS 95 93 93 LYS LYS A . n A 1 96 GLU 96 94 94 GLU GLU A . n A 1 97 ASN 97 95 95 ASN ASN A . n A 1 98 LEU 98 96 96 LEU LEU A . n A 1 99 ALA 99 97 97 ALA ALA A . n A 1 100 GLU 100 98 98 GLU GLU A . n A 1 101 VAL 101 99 99 VAL VAL A . n A 1 102 LEU 102 100 100 LEU LEU A . n A 1 103 ASP 103 101 101 ASP ASP A . n A 1 104 LYS 104 102 102 LYS LYS A . n A 1 105 HIS 105 103 103 HIS HIS A . n A 1 106 LEU 106 104 104 LEU LEU A . n B 1 1 SER 1 -1 -1 SER SER B . n B 1 2 HIS 2 0 0 HIS HIS B . n B 1 3 MET 3 1 1 MET MET B . n B 1 4 ALA 4 2 2 ALA ALA B . n B 1 5 ILE 5 3 3 ILE ILE B . n B 1 6 VAL 6 4 4 VAL VAL B . n B 1 7 LYS 7 5 5 LYS LYS B . n B 1 8 VAL 8 6 6 VAL VAL B . n B 1 9 THR 9 7 7 THR THR B . n B 1 10 ASP 10 8 8 ASP ASP B . n B 1 11 ALA 11 9 9 ALA ALA B . n B 1 12 ASP 12 10 10 ASP ASP B . n B 1 13 PHE 13 11 11 PHE PHE B . n B 1 14 ASP 14 12 12 ASP ASP B . n B 1 15 SER 15 13 13 SER SER B . n B 1 16 LYS 16 14 14 LYS LYS B . n B 1 17 VAL 17 15 15 VAL VAL B . n B 1 18 GLU 18 16 16 GLU GLU B . n B 1 19 SER 19 17 17 SER SER B . n B 1 20 GLY 20 18 18 GLY GLY B . n B 1 21 VAL 21 19 19 VAL VAL B . n B 1 22 GLN 22 20 20 GLN GLN B . n B 1 23 LEU 23 21 21 LEU LEU B . n B 1 24 VAL 24 22 22 VAL VAL B . n B 1 25 ASP 25 23 23 ASP ASP B . n B 1 26 PHE 26 24 24 PHE PHE B . n B 1 27 TRP 27 25 25 TRP TRP B . n B 1 28 ALA 28 26 26 ALA ALA B . n B 1 29 THR 29 27 27 THR THR B . n B 1 30 ALA 30 28 28 ALA ALA B . n B 1 31 CYS 31 29 29 CYS CYS B . n B 1 32 GLY 32 30 30 GLY GLY B . n B 1 33 PRO 33 31 31 PRO PRO B . n B 1 34 CYS 34 32 32 CYS CYS B . n B 1 35 LYS 35 33 33 LYS LYS B . n B 1 36 MET 36 34 34 MET MET B . n B 1 37 ILE 37 35 35 ILE ILE B . n B 1 38 ALA 38 36 36 ALA ALA B . n B 1 39 PRO 39 37 37 PRO PRO B . n B 1 40 VAL 40 38 38 VAL VAL B . n B 1 41 LEU 41 39 39 LEU LEU B . n B 1 42 GLU 42 40 40 GLU GLU B . n B 1 43 GLU 43 41 41 GLU GLU B . n B 1 44 LEU 44 42 42 LEU LEU B . n B 1 45 ALA 45 43 43 ALA ALA B . n B 1 46 ALA 46 44 44 ALA ALA B . n B 1 47 ASP 47 45 45 ASP ASP B . n B 1 48 TYR 48 46 46 TYR TYR B . n B 1 49 GLU 49 47 47 GLU GLU B . n B 1 50 GLY 50 48 48 GLY GLY B . n B 1 51 LYS 51 49 49 LYS LYS B . n B 1 52 ALA 52 50 50 ALA ALA B . n B 1 53 ASP 53 51 51 ASP ASP B . n B 1 54 ILE 54 52 52 ILE ILE B . n B 1 55 LEU 55 53 53 LEU LEU B . n B 1 56 LYS 56 54 54 LYS LYS B . n B 1 57 LEU 57 55 55 LEU LEU B . n B 1 58 ASP 58 56 56 ASP ASP B . n B 1 59 VAL 59 57 57 VAL VAL B . n B 1 60 ASP 60 58 58 ASP ASP B . n B 1 61 GLU 61 59 59 GLU GLU B . n B 1 62 ASN 62 60 60 ASN ASN B . n B 1 63 PRO 63 61 61 PRO PRO B . n B 1 64 SER 64 62 62 SER SER B . n B 1 65 THR 65 63 63 THR THR B . n B 1 66 ALA 66 64 64 ALA ALA B . n B 1 67 ALA 67 65 65 ALA ALA B . n B 1 68 LYS 68 66 66 LYS LYS B . n B 1 69 TYR 69 67 67 TYR TYR B . n B 1 70 GLU 70 68 68 GLU GLU B . n B 1 71 VAL 71 69 69 VAL VAL B . n B 1 72 MET 72 70 70 MET MET B . n B 1 73 SER 73 71 71 SER SER B . n B 1 74 ILE 74 72 72 ILE ILE B . n B 1 75 PRO 75 73 73 PRO PRO B . n B 1 76 THR 76 74 74 THR THR B . n B 1 77 LEU 77 75 75 LEU LEU B . n B 1 78 ILE 78 76 76 ILE ILE B . n B 1 79 VAL 79 77 77 VAL VAL B . n B 1 80 PHE 80 78 78 PHE PHE B . n B 1 81 LYS 81 79 79 LYS LYS B . n B 1 82 ASP 82 80 80 ASP ASP B . n B 1 83 GLY 83 81 81 GLY GLY B . n B 1 84 GLN 84 82 82 GLN GLN B . n B 1 85 PRO 85 83 83 PRO PRO B . n B 1 86 VAL 86 84 84 VAL VAL B . n B 1 87 ASP 87 85 85 ASP ASP B . n B 1 88 LYS 88 86 86 LYS LYS B . n B 1 89 VAL 89 87 87 VAL VAL B . n B 1 90 VAL 90 88 88 VAL VAL B . n B 1 91 GLY 91 89 89 GLY GLY B . n B 1 92 PHE 92 90 90 PHE PHE B . n B 1 93 GLN 93 91 91 GLN GLN B . n B 1 94 PRO 94 92 92 PRO PRO B . n B 1 95 LYS 95 93 93 LYS LYS B . n B 1 96 GLU 96 94 94 GLU GLU B . n B 1 97 ASN 97 95 95 ASN ASN B . n B 1 98 LEU 98 96 96 LEU LEU B . n B 1 99 ALA 99 97 97 ALA ALA B . n B 1 100 GLU 100 98 98 GLU GLU B . n B 1 101 VAL 101 99 99 VAL VAL B . n B 1 102 LEU 102 100 100 LEU LEU B . n B 1 103 ASP 103 101 101 ASP ASP B . n B 1 104 LYS 104 102 102 LYS LYS B . n B 1 105 HIS 105 103 103 HIS HIS B . n B 1 106 LEU 106 104 104 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD 1 105 1 CD CD A . D 2 CD 1 106 2 CD CD A . E 2 CD 1 107 3 CD CD A . F 3 FE 1 108 1 FE FE A . G 2 CD 1 105 4 CD CD B . H 3 FE 1 106 2 FE FE B . I 4 HOH 1 109 2 HOH HOH A . I 4 HOH 2 110 4 HOH HOH A . I 4 HOH 3 111 8 HOH HOH A . I 4 HOH 4 112 9 HOH HOH A . I 4 HOH 5 113 10 HOH HOH A . I 4 HOH 6 114 13 HOH HOH A . I 4 HOH 7 115 15 HOH HOH A . I 4 HOH 8 116 16 HOH HOH A . I 4 HOH 9 117 17 HOH HOH A . I 4 HOH 10 118 18 HOH HOH A . I 4 HOH 11 119 19 HOH HOH A . I 4 HOH 12 120 24 HOH HOH A . I 4 HOH 13 121 26 HOH HOH A . I 4 HOH 14 122 27 HOH HOH A . I 4 HOH 15 123 28 HOH HOH A . I 4 HOH 16 124 29 HOH HOH A . I 4 HOH 17 125 33 HOH HOH A . I 4 HOH 18 126 34 HOH HOH A . I 4 HOH 19 127 36 HOH HOH A . I 4 HOH 20 128 37 HOH HOH A . I 4 HOH 21 129 38 HOH HOH A . I 4 HOH 22 130 39 HOH HOH A . I 4 HOH 23 131 40 HOH HOH A . I 4 HOH 24 132 41 HOH HOH A . I 4 HOH 25 133 42 HOH HOH A . I 4 HOH 26 134 44 HOH HOH A . I 4 HOH 27 135 45 HOH HOH A . I 4 HOH 28 136 46 HOH HOH A . I 4 HOH 29 137 47 HOH HOH A . I 4 HOH 30 138 50 HOH HOH A . I 4 HOH 31 139 52 HOH HOH A . I 4 HOH 32 140 53 HOH HOH A . I 4 HOH 33 141 54 HOH HOH A . I 4 HOH 34 142 60 HOH HOH A . I 4 HOH 35 143 61 HOH HOH A . I 4 HOH 36 144 69 HOH HOH A . I 4 HOH 37 145 70 HOH HOH A . I 4 HOH 38 146 71 HOH HOH A . I 4 HOH 39 147 72 HOH HOH A . I 4 HOH 40 148 74 HOH HOH A . I 4 HOH 41 149 75 HOH HOH A . I 4 HOH 42 150 77 HOH HOH A . I 4 HOH 43 151 78 HOH HOH A . I 4 HOH 44 152 81 HOH HOH A . I 4 HOH 45 153 82 HOH HOH A . I 4 HOH 46 154 83 HOH HOH A . I 4 HOH 47 155 85 HOH HOH A . I 4 HOH 48 156 87 HOH HOH A . I 4 HOH 49 157 88 HOH HOH A . I 4 HOH 50 158 91 HOH HOH A . I 4 HOH 51 159 95 HOH HOH A . I 4 HOH 52 160 96 HOH HOH A . I 4 HOH 53 161 97 HOH HOH A . I 4 HOH 54 162 99 HOH HOH A . I 4 HOH 55 163 102 HOH HOH A . I 4 HOH 56 164 103 HOH HOH A . I 4 HOH 57 165 104 HOH HOH A . I 4 HOH 58 166 105 HOH HOH A . I 4 HOH 59 167 109 HOH HOH A . I 4 HOH 60 168 110 HOH HOH A . I 4 HOH 61 169 111 HOH HOH A . I 4 HOH 62 170 112 HOH HOH A . I 4 HOH 63 171 113 HOH HOH A . I 4 HOH 64 172 115 HOH HOH A . I 4 HOH 65 173 116 HOH HOH A . I 4 HOH 66 174 117 HOH HOH A . I 4 HOH 67 175 118 HOH HOH A . I 4 HOH 68 176 121 HOH HOH A . I 4 HOH 69 177 123 HOH HOH A . I 4 HOH 70 178 124 HOH HOH A . I 4 HOH 71 179 125 HOH HOH A . I 4 HOH 72 180 126 HOH HOH A . I 4 HOH 73 181 127 HOH HOH A . I 4 HOH 74 182 128 HOH HOH A . I 4 HOH 75 183 129 HOH HOH A . I 4 HOH 76 184 130 HOH HOH A . I 4 HOH 77 185 131 HOH HOH A . I 4 HOH 78 186 132 HOH HOH A . I 4 HOH 79 187 135 HOH HOH A . I 4 HOH 80 188 136 HOH HOH A . I 4 HOH 81 189 137 HOH HOH A . I 4 HOH 82 190 141 HOH HOH A . I 4 HOH 83 191 20 HOH HOH A . I 4 HOH 84 192 58 HOH HOH A . I 4 HOH 85 193 93 HOH HOH A . J 4 HOH 1 148 73 HOH HOH B . J 4 HOH 2 149 80 HOH HOH B . J 4 HOH 3 150 1 HOH HOH B . J 4 HOH 4 151 3 HOH HOH B . J 4 HOH 5 152 5 HOH HOH B . J 4 HOH 6 153 6 HOH HOH B . J 4 HOH 7 154 7 HOH HOH B . J 4 HOH 8 155 11 HOH HOH B . J 4 HOH 9 156 12 HOH HOH B . J 4 HOH 10 157 14 HOH HOH B . J 4 HOH 11 158 21 HOH HOH B . J 4 HOH 12 159 22 HOH HOH B . J 4 HOH 13 160 23 HOH HOH B . J 4 HOH 14 161 25 HOH HOH B . J 4 HOH 15 162 30 HOH HOH B . J 4 HOH 16 163 31 HOH HOH B . J 4 HOH 17 164 32 HOH HOH B . J 4 HOH 18 165 35 HOH HOH B . J 4 HOH 19 166 43 HOH HOH B . J 4 HOH 20 167 48 HOH HOH B . J 4 HOH 21 168 49 HOH HOH B . J 4 HOH 22 169 51 HOH HOH B . J 4 HOH 23 170 55 HOH HOH B . J 4 HOH 24 171 56 HOH HOH B . J 4 HOH 25 172 57 HOH HOH B . J 4 HOH 26 173 59 HOH HOH B . J 4 HOH 27 174 62 HOH HOH B . J 4 HOH 28 175 63 HOH HOH B . J 4 HOH 29 176 64 HOH HOH B . J 4 HOH 30 177 65 HOH HOH B . J 4 HOH 31 178 66 HOH HOH B . J 4 HOH 32 179 67 HOH HOH B . J 4 HOH 33 180 68 HOH HOH B . J 4 HOH 34 181 76 HOH HOH B . J 4 HOH 35 182 79 HOH HOH B . J 4 HOH 36 183 84 HOH HOH B . J 4 HOH 37 184 86 HOH HOH B . J 4 HOH 38 185 89 HOH HOH B . J 4 HOH 39 186 90 HOH HOH B . J 4 HOH 40 187 92 HOH HOH B . J 4 HOH 41 188 94 HOH HOH B . J 4 HOH 42 189 98 HOH HOH B . J 4 HOH 43 190 100 HOH HOH B . J 4 HOH 44 191 101 HOH HOH B . J 4 HOH 45 192 106 HOH HOH B . J 4 HOH 46 193 107 HOH HOH B . J 4 HOH 47 194 108 HOH HOH B . J 4 HOH 48 195 114 HOH HOH B . J 4 HOH 49 196 119 HOH HOH B . J 4 HOH 50 197 120 HOH HOH B . J 4 HOH 51 198 122 HOH HOH B . J 4 HOH 52 199 133 HOH HOH B . J 4 HOH 53 200 134 HOH HOH B . J 4 HOH 54 201 138 HOH HOH B . J 4 HOH 55 202 139 HOH HOH B . J 4 HOH 56 203 140 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7520 ? 1 MORE -73 ? 1 'SSA (A^2)' 9960 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 2 ? A HIS 0 ? 1_555 FE ? F FE . ? A FE 108 ? 1_555 O ? I HOH . ? A HOH 189 ? 1_555 91.8 ? 2 NE2 ? A HIS 2 ? A HIS 0 ? 1_555 FE ? F FE . ? A FE 108 ? 1_555 OE2 ? B GLU 43 ? B GLU 41 ? 1_555 97.0 ? 3 O ? I HOH . ? A HOH 189 ? 1_555 FE ? F FE . ? A FE 108 ? 1_555 OE2 ? B GLU 43 ? B GLU 41 ? 1_555 91.8 ? 4 OE1 ? A GLU 42 ? A GLU 40 ? 1_555 CD ? C CD . ? A CD 105 ? 1_555 OE2 ? A GLU 42 ? A GLU 40 ? 1_555 54.2 ? 5 OD1 ? A ASP 82 ? A ASP 80 ? 1_555 CD ? D CD . ? A CD 106 ? 1_555 OD2 ? A ASP 82 ? A ASP 80 ? 1_555 53.0 ? 6 OD1 ? A ASP 82 ? A ASP 80 ? 1_555 CD ? D CD . ? A CD 106 ? 1_555 O ? I HOH . ? A HOH 109 ? 1_555 98.4 ? 7 OD2 ? A ASP 82 ? A ASP 80 ? 1_555 CD ? D CD . ? A CD 106 ? 1_555 O ? I HOH . ? A HOH 109 ? 1_555 107.6 ? 8 OD1 ? A ASP 82 ? A ASP 80 ? 1_555 CD ? D CD . ? A CD 106 ? 1_555 O ? I HOH . ? A HOH 191 ? 1_555 145.9 ? 9 OD2 ? A ASP 82 ? A ASP 80 ? 1_555 CD ? D CD . ? A CD 106 ? 1_555 O ? I HOH . ? A HOH 191 ? 1_555 95.5 ? 10 O ? I HOH . ? A HOH 109 ? 1_555 CD ? D CD . ? A CD 106 ? 1_555 O ? I HOH . ? A HOH 191 ? 1_555 104.2 ? 11 O ? A LEU 106 ? A LEU 104 ? 1_555 CD ? E CD . ? A CD 107 ? 1_555 OXT ? A LEU 106 ? A LEU 104 ? 1_555 51.8 ? 12 O ? A LEU 106 ? A LEU 104 ? 1_555 CD ? E CD . ? A CD 107 ? 1_555 O ? I HOH . ? A HOH 187 ? 1_555 79.4 ? 13 OXT ? A LEU 106 ? A LEU 104 ? 1_555 CD ? E CD . ? A CD 107 ? 1_555 O ? I HOH . ? A HOH 187 ? 1_555 84.6 ? 14 OE2 ? B GLU 43 ? B GLU 41 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 149 ? 1_555 80.9 ? 15 OE2 ? B GLU 43 ? B GLU 41 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 201 ? 1_555 72.6 ? 16 O ? J HOH . ? B HOH 149 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 201 ? 1_555 81.1 ? 17 OE2 ? B GLU 43 ? B GLU 41 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 202 ? 1_555 86.7 ? 18 O ? J HOH . ? B HOH 149 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 202 ? 1_555 158.8 ? 19 O ? J HOH . ? B HOH 201 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 202 ? 1_555 78.8 ? 20 OE2 ? B GLU 43 ? B GLU 41 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 203 ? 1_555 98.4 ? 21 O ? J HOH . ? B HOH 149 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 203 ? 1_555 109.7 ? 22 O ? J HOH . ? B HOH 201 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 203 ? 1_555 165.1 ? 23 O ? J HOH . ? B HOH 202 ? 1_555 FE ? H FE . ? B FE 106 ? 1_555 O ? J HOH . ? B HOH 203 ? 1_555 89.0 ? 24 OE1 ? B GLU 49 ? B GLU 47 ? 1_555 CD ? G CD . ? B CD 105 ? 1_555 OE2 ? B GLU 49 ? B GLU 47 ? 1_555 55.8 ? 25 OE1 ? B GLU 49 ? B GLU 47 ? 1_555 CD ? G CD . ? B CD 105 ? 1_555 O ? J HOH . ? B HOH 198 ? 1_555 102.5 ? 26 OE2 ? B GLU 49 ? B GLU 47 ? 1_555 CD ? G CD . ? B CD 105 ? 1_555 O ? J HOH . ? B HOH 198 ? 1_555 103.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-24 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-11-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' diffrn_source 3 3 'Structure model' pdbx_struct_conn_angle 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.value' 19 3 'Structure model' '_struct_conn.pdbx_dist_value' 20 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 3 'Structure model' '_struct_ref_seq_dif.details' 35 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 2 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 3 DENZO . ? ? ? ? 'data reduction' ? ? ? 4 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 5 PHASER . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CD A CD 107 ? ? O A HOH 188 ? ? 1.57 2 1 O A HOH 180 ? ? O A HOH 181 ? ? 1.79 3 1 OD1 B ASP 45 ? ? O B HOH 167 ? ? 2.08 4 1 OE2 A GLU 41 ? ? O A HOH 132 ? ? 2.09 5 1 NE2 B HIS 0 ? ? O A HOH 132 ? ? 2.17 6 1 OD2 A ASP 58 ? ? O A HOH 158 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OD2 B ASP 80 ? ? 1_555 CD A CD 105 ? ? 3_555 1.63 2 1 O B HOH 156 ? ? 1_555 O B HOH 199 ? ? 3_555 2.17 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 80 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 80 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 80 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 127.75 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 9.45 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 16 ? ? -149.82 -44.34 2 1 ASP A 85 ? ? -170.30 146.27 3 1 GLU B 16 ? ? -135.62 -36.75 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id MET _pdbx_validate_main_chain_plane.auth_asym_id B _pdbx_validate_main_chain_plane.auth_seq_id 70 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 14.62 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 5 ? CD ? A LYS 7 CD 2 1 Y 1 A LYS 5 ? CE ? A LYS 7 CE 3 1 Y 1 A LYS 5 ? NZ ? A LYS 7 NZ 4 1 Y 1 A LYS 33 ? CG ? A LYS 35 CG 5 1 Y 1 A LYS 33 ? CD ? A LYS 35 CD 6 1 Y 1 A LYS 33 ? CE ? A LYS 35 CE 7 1 Y 1 A LYS 33 ? NZ ? A LYS 35 NZ 8 1 Y 1 A GLU 47 ? CG ? A GLU 49 CG 9 1 Y 1 A GLU 47 ? CD ? A GLU 49 CD 10 1 Y 1 A GLU 47 ? OE1 ? A GLU 49 OE1 11 1 Y 1 A GLU 47 ? OE2 ? A GLU 49 OE2 12 1 Y 1 A LYS 49 ? CE ? A LYS 51 CE 13 1 Y 1 A LYS 49 ? NZ ? A LYS 51 NZ 14 1 Y 1 A LYS 66 ? CD ? A LYS 68 CD 15 1 Y 1 A LYS 66 ? CE ? A LYS 68 CE 16 1 Y 1 A LYS 66 ? NZ ? A LYS 68 NZ 17 1 Y 1 A GLU 68 ? CG ? A GLU 70 CG 18 1 Y 1 A GLU 68 ? CD ? A GLU 70 CD 19 1 Y 1 A GLU 68 ? OE1 ? A GLU 70 OE1 20 1 Y 1 A GLU 68 ? OE2 ? A GLU 70 OE2 21 1 Y 1 A GLN 82 ? OE1 ? A GLN 84 OE1 22 1 Y 1 A GLN 82 ? NE2 ? A GLN 84 NE2 23 1 Y 1 A LYS 86 ? CE ? A LYS 88 CE 24 1 Y 1 A LYS 86 ? NZ ? A LYS 88 NZ 25 1 Y 1 A GLU 94 ? CG ? A GLU 96 CG 26 1 Y 1 A GLU 94 ? CD ? A GLU 96 CD 27 1 Y 1 A GLU 94 ? OE1 ? A GLU 96 OE1 28 1 Y 1 A GLU 94 ? OE2 ? A GLU 96 OE2 29 1 Y 1 A GLU 98 ? CG ? A GLU 100 CG 30 1 Y 1 A GLU 98 ? CD ? A GLU 100 CD 31 1 Y 1 A GLU 98 ? OE1 ? A GLU 100 OE1 32 1 Y 1 A GLU 98 ? OE2 ? A GLU 100 OE2 33 1 Y 1 A LYS 102 ? NZ ? A LYS 104 NZ 34 1 Y 1 B MET 1 ? SD ? B MET 3 SD 35 1 Y 1 B MET 1 ? CE ? B MET 3 CE 36 1 Y 1 B VAL 4 ? CG1 ? B VAL 6 CG1 37 1 Y 1 B VAL 4 ? CG2 ? B VAL 6 CG2 38 1 Y 1 B LYS 5 ? NZ ? B LYS 7 NZ 39 1 Y 1 B ASP 12 ? OD1 ? B ASP 14 OD1 40 1 Y 1 B ASP 12 ? OD2 ? B ASP 14 OD2 41 1 Y 1 B GLU 16 ? CG ? B GLU 18 CG 42 1 Y 1 B GLU 16 ? CD ? B GLU 18 CD 43 1 Y 1 B GLU 16 ? OE1 ? B GLU 18 OE1 44 1 Y 1 B GLU 16 ? OE2 ? B GLU 18 OE2 45 1 Y 1 B THR 27 ? CG2 ? B THR 29 CG2 46 1 Y 1 B LYS 33 ? CD ? B LYS 35 CD 47 1 Y 1 B LYS 33 ? CE ? B LYS 35 CE 48 1 Y 1 B LYS 33 ? NZ ? B LYS 35 NZ 49 1 Y 1 B LYS 49 ? CE ? B LYS 51 CE 50 1 Y 1 B LYS 49 ? NZ ? B LYS 51 NZ 51 1 Y 1 B LYS 66 ? CD ? B LYS 68 CD 52 1 Y 1 B LYS 66 ? CE ? B LYS 68 CE 53 1 Y 1 B LYS 66 ? NZ ? B LYS 68 NZ 54 1 Y 1 B GLU 68 ? CG ? B GLU 70 CG 55 1 Y 1 B GLU 68 ? CD ? B GLU 70 CD 56 1 Y 1 B GLU 68 ? OE1 ? B GLU 70 OE1 57 1 Y 1 B GLU 68 ? OE2 ? B GLU 70 OE2 58 1 Y 1 B LYS 79 ? CG ? B LYS 81 CG 59 1 Y 1 B LYS 79 ? CD ? B LYS 81 CD 60 1 Y 1 B LYS 79 ? CE ? B LYS 81 CE 61 1 Y 1 B LYS 79 ? NZ ? B LYS 81 NZ 62 1 Y 1 B GLN 82 ? CG ? B GLN 84 CG 63 1 Y 1 B GLN 82 ? CD ? B GLN 84 CD 64 1 Y 1 B GLN 82 ? OE1 ? B GLN 84 OE1 65 1 Y 1 B GLN 82 ? NE2 ? B GLN 84 NE2 66 1 Y 1 B LYS 86 ? CE ? B LYS 88 CE 67 1 Y 1 B LYS 86 ? NZ ? B LYS 88 NZ 68 1 Y 1 B LYS 93 ? NZ ? B LYS 95 NZ 69 1 Y 1 B GLU 94 ? CB ? B GLU 96 CB 70 1 Y 1 B GLU 94 ? CG ? B GLU 96 CG 71 1 Y 1 B GLU 94 ? CD ? B GLU 96 CD 72 1 Y 1 B GLU 94 ? OE1 ? B GLU 96 OE1 73 1 Y 1 B GLU 94 ? OE2 ? B GLU 96 OE2 74 1 Y 1 B GLU 98 ? CG ? B GLU 100 CG 75 1 Y 1 B GLU 98 ? CD ? B GLU 100 CD 76 1 Y 1 B GLU 98 ? OE1 ? B GLU 100 OE1 77 1 Y 1 B GLU 98 ? OE2 ? B GLU 100 OE2 78 1 Y 1 B LYS 102 ? CG ? B LYS 104 CG 79 1 Y 1 B LYS 102 ? CD ? B LYS 104 CD 80 1 Y 1 B LYS 102 ? CE ? B LYS 104 CE 81 1 Y 1 B LYS 102 ? NZ ? B LYS 104 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 'FE (III) ION' FE 4 water HOH #