data_3DJ2 # _entry.id 3DJ2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DJ2 pdb_00003dj2 10.2210/pdb3dj2/pdb NDB UR0159 ? ? RCSB RCSB048099 ? ? WWPDB D_1000048099 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3DIG . unspecified PDB 3DIL . unspecified PDB 3DIM . unspecified PDB 3DIO . unspecified PDB 3DIQ . unspecified PDB 3DIR . unspecified PDB 3DIS . unspecified PDB 3DIX . unspecified PDB 3DIY . unspecified PDB 3DIZ . unspecified PDB 3DJ0 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DJ2 _pdbx_database_status.recvd_initial_deposition_date 2008-06-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Serganov, A.A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural insights into amino acid binding and gene control by a lysine riboswitch.' _citation.journal_abbrev Nature _citation.journal_volume 455 _citation.page_first 1263 _citation.page_last 1267 _citation.year 2008 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18784651 _citation.pdbx_database_id_DOI 10.1038/nature07326 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Serganov, A.' 1 ? primary 'Huang, L.' 2 ? primary 'Patel, D.J.' 3 ? # _cell.entry_id 3DJ2 _cell.length_a 54.086 _cell.length_b 78.751 _cell.length_c 140.992 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DJ2 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (174-MER)' 56635.598 1 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 8 ? ? ? ? 3 non-polymer syn LYSINE 147.195 1 ? ? ? ? 4 non-polymer syn 'THALLIUM (I) ION' 204.383 10 ? ? ? ? 5 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 1 ? ? ? ? 6 water nat water 18.015 118 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GGCCGACGGAGGCGCGCCCGAGAUGAGUAGGCUGUCCCAUCAGGGGAGGAAUCGGGGACGGCUGAAAGGCGAGGGCGCCG AAGGGUGCAGAGUUCCUCCCGCUCUGCAUGCCUGGGGGUAUGGGGAAUACCCAUACCACUGUCACGGAGGUCUCUCCGUG GAGAGCCGUCGGU(CCC) ; _entity_poly.pdbx_seq_one_letter_code_can ;GGCCGACGGAGGCGCGCCCGAGAUGAGUAGGCUGUCCCAUCAGGGGAGGAAUCGGGGACGGCUGAAAGGCGAGGGCGCCG AAGGGUGCAGAGUUCCUCCCGCUCUGCAUGCCUGGGGGUAUGGGGAAUACCCAUACCACUGUCACGGAGGUCUCUCCGUG GAGAGCCGUCGGUC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 C n 1 5 G n 1 6 A n 1 7 C n 1 8 G n 1 9 G n 1 10 A n 1 11 G n 1 12 G n 1 13 C n 1 14 G n 1 15 C n 1 16 G n 1 17 C n 1 18 C n 1 19 C n 1 20 G n 1 21 A n 1 22 G n 1 23 A n 1 24 U n 1 25 G n 1 26 A n 1 27 G n 1 28 U n 1 29 A n 1 30 G n 1 31 G n 1 32 C n 1 33 U n 1 34 G n 1 35 U n 1 36 C n 1 37 C n 1 38 C n 1 39 A n 1 40 U n 1 41 C n 1 42 A n 1 43 G n 1 44 G n 1 45 G n 1 46 G n 1 47 A n 1 48 G n 1 49 G n 1 50 A n 1 51 A n 1 52 U n 1 53 C n 1 54 G n 1 55 G n 1 56 G n 1 57 G n 1 58 A n 1 59 C n 1 60 G n 1 61 G n 1 62 C n 1 63 U n 1 64 G n 1 65 A n 1 66 A n 1 67 A n 1 68 G n 1 69 G n 1 70 C n 1 71 G n 1 72 A n 1 73 G n 1 74 G n 1 75 G n 1 76 C n 1 77 G n 1 78 C n 1 79 C n 1 80 G n 1 81 A n 1 82 A n 1 83 G n 1 84 G n 1 85 G n 1 86 U n 1 87 G n 1 88 C n 1 89 A n 1 90 G n 1 91 A n 1 92 G n 1 93 U n 1 94 U n 1 95 C n 1 96 C n 1 97 U n 1 98 C n 1 99 C n 1 100 C n 1 101 G n 1 102 C n 1 103 U n 1 104 C n 1 105 U n 1 106 G n 1 107 C n 1 108 A n 1 109 U n 1 110 G n 1 111 C n 1 112 C n 1 113 U n 1 114 G n 1 115 G n 1 116 G n 1 117 G n 1 118 G n 1 119 U n 1 120 A n 1 121 U n 1 122 G n 1 123 G n 1 124 G n 1 125 G n 1 126 A n 1 127 A n 1 128 U n 1 129 A n 1 130 C n 1 131 C n 1 132 C n 1 133 A n 1 134 U n 1 135 A n 1 136 C n 1 137 C n 1 138 A n 1 139 C n 1 140 U n 1 141 G n 1 142 U n 1 143 C n 1 144 A n 1 145 C n 1 146 G n 1 147 G n 1 148 A n 1 149 G n 1 150 G n 1 151 U n 1 152 C n 1 153 U n 1 154 C n 1 155 U n 1 156 C n 1 157 C n 1 158 G n 1 159 U n 1 160 G n 1 161 G n 1 162 A n 1 163 G n 1 164 A n 1 165 G n 1 166 C n 1 167 C n 1 168 G n 1 169 U n 1 170 C n 1 171 G n 1 172 G n 1 173 U n 1 174 CCC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'In vitro transcribed RNA from the Thermotoga maritima MSB8 asd gene' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3DJ2 _struct_ref.pdbx_db_accession 3DJ2 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DJ2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 174 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3DJ2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 174 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 174 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 TL non-polymer . 'THALLIUM (I) ION' ? 'Tl 1' 204.383 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 3DJ2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.65 _exptl_crystal.density_percent_sol 53.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.7 _exptl_crystal_grow.pdbx_details '18% PEG 4000, 0.1M Sodium Citrate, 20% isopropanol, pH 5.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 'Sodium Citrate' ? ? ? 1 3 1 isopropanol ? ? ? 1 4 2 'PEG 4000' ? ? ? 1 5 2 'Sodium Citrate' ? ? ? 1 6 2 isopropanol ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2008-02-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 3DJ2 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 20.00 _reflns.number_all 21522 _reflns.number_obs 21350 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.102 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 26.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs 0.585 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.1 _reflns_shell.pdbx_redundancy 7.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2113 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DJ2 _refine.ls_number_reflns_obs 20170 _refine.ls_number_reflns_all 20373 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 99.03 _refine.ls_R_factor_obs 0.20751 _refine.ls_R_factor_all 0.20751 _refine.ls_R_factor_R_work 0.20521 _refine.ls_R_factor_R_free 0.25092 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 1098 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 28.429 _refine.aniso_B[1][1] -0.35 _refine.aniso_B[2][2] -3.07 _refine.aniso_B[3][3] 3.42 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'pdb entry 3DIL' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model tls _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.485 _refine.pdbx_overall_ESU_R_Free 0.282 _refine.overall_SU_ML 0.203 _refine.overall_SU_B 17.146 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3DJ2 _refine_analyze.Luzzati_coordinate_error_obs 0.203 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3752 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 118 _refine_hist.number_atoms_total 3902 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.021 ? 4212 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.196 2.999 ? 6572 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.629 15.000 ? 4 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.083 0.200 ? 871 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1838 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.149 0.200 ? 1589 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.262 0.200 ? 2628 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.130 0.200 ? 230 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.108 0.200 ? 3 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.122 0.200 ? 47 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.170 0.200 ? 12 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.061 1.500 ? 8 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.078 2.000 ? 9 'X-RAY DIFFRACTION' ? r_scbond_it 0.498 3.000 ? 5058 'X-RAY DIFFRACTION' ? r_scangle_it 0.800 4.500 ? 6563 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.564 _refine_ls_shell.number_reflns_R_work 1430 _refine_ls_shell.R_factor_R_work 0.341 _refine_ls_shell.percent_reflns_obs 97.56 _refine_ls_shell.R_factor_R_free 0.385 _refine_ls_shell.R_factor_R_free_error 0.282 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 89 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1519 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DJ2 _struct.title 'Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, Tl+ Soak' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DJ2 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'lysine, riboswitch, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 4 ? U N N 5 ? V N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A U 173 "O3'" ? ? ? 1_555 A CCC 174 P ? ? A U 173 A CCC 174 1_555 ? ? ? ? ? ? ? 1.603 ? ? metalc1 metalc ? ? A G 9 O6 ? ? ? 1_555 G NA . NA ? ? A G 9 A NA 206 1_555 ? ? ? ? ? ? ? 2.646 ? ? metalc2 metalc ? ? A G 11 OP2 ? ? ? 1_555 E NA . NA ? ? A G 11 A NA 204 1_555 ? ? ? ? ? ? ? 2.513 ? ? metalc3 metalc ? ? A G 12 O6 ? ? ? 1_555 E NA . NA ? ? A G 12 A NA 204 1_555 ? ? ? ? ? ? ? 2.651 ? ? metalc4 metalc ? ? A G 20 O6 ? ? ? 1_555 C NA . NA ? ? A G 20 A NA 202 1_555 ? ? ? ? ? ? ? 2.583 ? ? metalc5 metalc ? ? A G 71 O6 ? ? ? 1_555 C NA . NA ? ? A G 71 A NA 202 1_555 ? ? ? ? ? ? ? 2.413 ? ? metalc6 metalc ? ? B NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 201 A HOH 315 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc7 metalc ? ? B NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 201 A HOH 414 1_555 ? ? ? ? ? ? ? 2.394 ? ? metalc8 metalc ? ? C NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 202 A HOH 321 1_555 ? ? ? ? ? ? ? 2.228 ? ? metalc9 metalc ? ? C NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 202 A HOH 344 1_555 ? ? ? ? ? ? ? 2.492 ? ? metalc10 metalc ? ? E NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 204 A HOH 351 1_555 ? ? ? ? ? ? ? 2.470 ? ? metalc11 metalc ? ? E NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 204 A HOH 352 1_555 ? ? ? ? ? ? ? 2.627 ? ? metalc12 metalc ? ? F NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 205 A HOH 330 1_555 ? ? ? ? ? ? ? 2.619 ? ? metalc13 metalc ? ? G NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 206 A HOH 334 1_555 ? ? ? ? ? ? ? 2.607 ? ? metalc14 metalc ? ? G NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 206 A HOH 417 1_555 ? ? ? ? ? ? ? 2.874 ? ? metalc15 metalc ? ? H NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 207 A HOH 305 1_555 ? ? ? ? ? ? ? 2.503 ? ? metalc16 metalc ? ? I NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 208 A HOH 309 1_555 ? ? ? ? ? ? ? 2.431 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A CCC 174 N3 ? ? A G 1 A CCC 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A CCC 174 O2 ? ? A G 1 A CCC 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A CCC 174 N4 ? ? A G 1 A CCC 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 173 O2 ? ? A G 2 A U 173 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 173 N3 ? ? A G 2 A U 173 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 172 N1 ? ? A C 3 A G 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 172 O6 ? ? A C 3 A G 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 172 N2 ? ? A C 3 A G 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 171 N1 ? ? A C 4 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 171 O6 ? ? A C 4 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 171 N2 ? ? A C 4 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 170 N3 ? ? A G 5 A C 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 170 O2 ? ? A G 5 A C 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 170 N4 ? ? A G 5 A C 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 169 N3 ? ? A A 6 A U 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 169 O4 ? ? A A 6 A U 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 168 N1 ? ? A C 7 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 168 O6 ? ? A C 7 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 168 N2 ? ? A C 7 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 167 N3 ? ? A G 8 A C 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 167 O2 ? ? A G 8 A C 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 167 N4 ? ? A G 8 A C 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 166 N3 ? ? A G 9 A C 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 166 O2 ? ? A G 9 A C 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 166 N4 ? ? A G 9 A C 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 10 N1 ? ? ? 1_555 A G 165 N1 ? ? A A 10 A G 165 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog27 hydrog ? ? A A 10 N6 ? ? ? 1_555 A G 165 O6 ? ? A A 10 A G 165 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog28 hydrog ? ? A G 11 N7 ? ? ? 1_555 A G 163 N1 ? ? A G 11 A G 163 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog29 hydrog ? ? A G 11 O6 ? ? ? 1_555 A G 163 N2 ? ? A G 11 A G 163 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog30 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 79 N3 ? ? A G 12 A C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 79 O2 ? ? A G 12 A C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 79 N4 ? ? A G 12 A C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 78 N3 ? ? A G 14 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 78 O2 ? ? A G 14 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 78 N4 ? ? A G 14 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 14 N2 ? ? ? 1_555 A A 81 N3 ? ? A G 14 A A 81 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog37 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 77 N1 ? ? A C 15 A G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 77 O6 ? ? A C 15 A G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 77 N2 ? ? A C 15 A G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 76 N3 ? ? A G 16 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 76 O2 ? ? A G 16 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 76 N4 ? ? A G 16 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 17 N3 ? ? ? 1_555 A G 75 N1 ? ? A C 17 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 17 N4 ? ? ? 1_555 A G 75 O6 ? ? A C 17 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 17 O2 ? ? ? 1_555 A G 75 N2 ? ? A C 17 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 74 N1 ? ? A C 18 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 74 O6 ? ? A C 18 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 74 N2 ? ? A C 18 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 19 N3 ? ? ? 1_555 A G 73 N1 ? ? A C 19 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 19 N4 ? ? ? 1_555 A G 73 O6 ? ? A C 19 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 19 O2 ? ? ? 1_555 A G 73 N2 ? ? A C 19 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 20 N2 ? ? ? 1_555 A A 72 N7 ? ? A G 20 A A 72 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog53 hydrog ? ? A G 20 N3 ? ? ? 1_555 A A 72 N6 ? ? A G 20 A A 72 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog54 hydrog ? ? A A 21 N6 ? ? ? 1_555 A G 71 N3 ? ? A A 21 A G 71 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog55 hydrog ? ? A A 21 N7 ? ? ? 1_555 A G 71 N2 ? ? A A 21 A G 71 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog56 hydrog ? ? A G 22 N1 ? ? ? 1_555 A C 70 N3 ? ? A G 22 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 22 N2 ? ? ? 1_555 A C 70 O2 ? ? A G 22 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 22 O6 ? ? ? 1_555 A C 70 N4 ? ? A G 22 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A A 23 N1 ? ? ? 1_555 A G 69 N1 ? ? A A 23 A G 69 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog60 hydrog ? ? A A 23 N6 ? ? ? 1_555 A G 69 O6 ? ? A A 23 A G 69 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog61 hydrog ? ? A U 24 O2 ? ? ? 1_555 A G 69 N1 ? ? A U 24 A G 69 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog62 hydrog ? ? A G 25 N2 ? ? ? 1_555 A A 67 N7 ? ? A G 25 A A 67 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog63 hydrog ? ? A A 26 N6 ? ? ? 1_555 A A 66 N7 ? ? A A 26 A A 66 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog64 hydrog ? ? A A 26 N7 ? ? ? 1_555 A A 66 N6 ? ? A A 26 A A 66 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog65 hydrog ? ? A G 27 N2 ? ? ? 1_555 A U 28 O4 ? ? A G 27 A U 28 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog66 hydrog ? ? A U 28 N3 ? ? ? 1_555 A A 65 N7 ? ? A U 28 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog67 hydrog ? ? A U 28 O2 ? ? ? 1_555 A A 65 N6 ? ? A U 28 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog68 hydrog ? ? A A 29 N6 ? ? ? 1_555 A G 64 N3 ? ? A A 29 A G 64 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog69 hydrog ? ? A A 29 N7 ? ? ? 1_555 A G 64 N2 ? ? A A 29 A G 64 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog70 hydrog ? ? A G 30 N1 ? ? ? 1_555 A U 63 O2 ? ? A G 30 A U 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog71 hydrog ? ? A G 30 O6 ? ? ? 1_555 A U 63 N3 ? ? A G 30 A U 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog72 hydrog ? ? A G 31 N1 ? ? ? 1_555 A C 62 N3 ? ? A G 31 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 31 N2 ? ? ? 1_555 A C 62 O2 ? ? A G 31 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 31 O6 ? ? ? 1_555 A C 62 N4 ? ? A G 31 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 61 N1 ? ? A C 32 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 61 O6 ? ? A C 32 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 61 N2 ? ? A C 32 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A U 33 N3 ? ? ? 1_555 A G 60 O6 ? ? A U 33 A G 60 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog79 hydrog ? ? A U 33 O2 ? ? ? 1_555 A G 60 N1 ? ? A U 33 A G 60 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog80 hydrog ? ? A G 34 N1 ? ? ? 1_555 A C 59 N3 ? ? A G 34 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A G 34 N2 ? ? ? 1_555 A C 59 O2 ? ? A G 34 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 34 O6 ? ? ? 1_555 A C 59 N4 ? ? A G 34 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A U 35 N3 ? ? ? 1_555 A A 58 N1 ? ? A U 35 A A 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A U 35 O4 ? ? ? 1_555 A A 58 N6 ? ? A U 35 A A 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 36 N3 ? ? ? 1_555 A G 57 N1 ? ? A C 36 A G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A C 36 N4 ? ? ? 1_555 A G 57 O6 ? ? A C 36 A G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A C 36 O2 ? ? ? 1_555 A G 57 N2 ? ? A C 36 A G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A C 37 N3 ? ? ? 1_555 A G 56 N1 ? ? A C 37 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A C 37 N4 ? ? ? 1_555 A G 56 O6 ? ? A C 37 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 37 O2 ? ? ? 1_555 A G 56 N2 ? ? A C 37 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 38 N3 ? ? ? 1_555 A G 55 N1 ? ? A C 38 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 38 N4 ? ? ? 1_555 A G 55 O6 ? ? A C 38 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A C 38 O2 ? ? ? 1_555 A G 55 N2 ? ? A C 38 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A A 39 N3 ? ? ? 1_555 A C 41 N4 ? ? A A 39 A C 41 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog95 hydrog ? ? A U 40 N3 ? ? ? 1_555 A U 52 O2 ? ? A U 40 A U 52 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog96 hydrog ? ? A U 40 O2 ? ? ? 1_555 A U 52 N3 ? ? A U 40 A U 52 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog97 hydrog ? ? A C 41 N3 ? ? ? 1_555 A G 54 N1 ? ? A C 41 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A C 41 N4 ? ? ? 1_555 A G 54 O6 ? ? A C 41 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A C 41 O2 ? ? ? 1_555 A G 54 N2 ? ? A C 41 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A A 42 N6 ? ? ? 1_555 A A 50 N1 ? ? A A 42 A A 50 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog101 hydrog ? ? A A 42 N7 ? ? ? 1_555 A A 50 N6 ? ? A A 42 A A 50 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog102 hydrog ? ? A G 44 N1 ? ? ? 1_555 A C 100 N3 ? ? A G 44 A C 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A G 44 N2 ? ? ? 1_555 A C 100 O2 ? ? A G 44 A C 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A G 44 O6 ? ? ? 1_555 A C 100 N4 ? ? A G 44 A C 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A G 45 N1 ? ? ? 1_555 A C 99 N3 ? ? A G 45 A C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A G 45 N2 ? ? ? 1_555 A C 99 O2 ? ? A G 45 A C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A G 45 O6 ? ? ? 1_555 A C 99 N4 ? ? A G 45 A C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A G 46 N1 ? ? ? 1_555 A C 98 N3 ? ? A G 46 A C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A G 46 N2 ? ? ? 1_555 A C 98 O2 ? ? A G 46 A C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A G 46 O6 ? ? ? 1_555 A C 98 N4 ? ? A G 46 A C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A A 47 N1 ? ? ? 1_555 A U 97 N3 ? ? A A 47 A U 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A A 47 N6 ? ? ? 1_555 A U 97 O4 ? ? A A 47 A U 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A G 48 N1 ? ? ? 1_555 A C 96 N3 ? ? A G 48 A C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A G 48 N2 ? ? ? 1_555 A C 96 O2 ? ? A G 48 A C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A G 48 O6 ? ? ? 1_555 A C 96 N4 ? ? A G 48 A C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A G 49 N1 ? ? ? 1_555 A C 95 N3 ? ? A G 49 A C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A G 49 N2 ? ? ? 1_555 A C 95 O2 ? ? A G 49 A C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A G 49 O6 ? ? ? 1_555 A C 95 N4 ? ? A G 49 A C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A G 68 N1 ? ? ? 1_555 A A 126 N7 ? ? A G 68 A A 126 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog120 hydrog ? ? A G 68 O6 ? ? ? 1_555 A A 126 N6 ? ? A G 68 A A 126 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog121 hydrog ? ? A G 69 N2 ? ? ? 1_555 A A 127 N1 ? ? A G 69 A A 127 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog122 hydrog ? ? A G 69 N3 ? ? ? 1_555 A A 127 N6 ? ? A G 69 A A 127 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog123 hydrog ? ? A G 80 N2 ? ? ? 1_555 A A 81 N7 ? ? A G 80 A A 81 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog124 hydrog ? ? A A 82 N1 ? ? ? 1_555 A U 113 N3 ? ? A A 82 A U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A A 82 N6 ? ? ? 1_555 A U 113 O4 ? ? A A 82 A U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A G 83 N1 ? ? ? 1_555 A C 112 N3 ? ? A G 83 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A G 83 N2 ? ? ? 1_555 A C 112 O2 ? ? A G 83 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A G 83 O6 ? ? ? 1_555 A C 112 N4 ? ? A G 83 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A G 84 N1 ? ? ? 1_555 A C 111 N3 ? ? A G 84 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A G 84 N2 ? ? ? 1_555 A C 111 O2 ? ? A G 84 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A G 84 O6 ? ? ? 1_555 A C 111 N4 ? ? A G 84 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A G 85 N1 ? ? ? 1_555 A U 109 O2 ? ? A G 85 A U 109 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog133 hydrog ? ? A G 85 O6 ? ? ? 1_555 A U 109 N3 ? ? A G 85 A U 109 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog134 hydrog ? ? A U 86 N3 ? ? ? 1_555 A A 108 N1 ? ? A U 86 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A U 86 O4 ? ? ? 1_555 A A 108 N6 ? ? A U 86 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? A G 87 N1 ? ? ? 1_555 A C 107 N3 ? ? A G 87 A C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? A G 87 N2 ? ? ? 1_555 A C 107 O2 ? ? A G 87 A C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? A G 87 O6 ? ? ? 1_555 A C 107 N4 ? ? A G 87 A C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A C 88 N3 ? ? ? 1_555 A G 106 N1 ? ? A C 88 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A C 88 N4 ? ? ? 1_555 A G 106 O6 ? ? A C 88 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A C 88 O2 ? ? ? 1_555 A G 106 N2 ? ? A C 88 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A A 89 N1 ? ? ? 1_555 A U 105 N3 ? ? A A 89 A U 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A A 89 N6 ? ? ? 1_555 A U 105 O4 ? ? A A 89 A U 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A G 90 N1 ? ? ? 1_555 A C 104 N3 ? ? A G 90 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A G 90 N2 ? ? ? 1_555 A C 104 O2 ? ? A G 90 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A G 90 O6 ? ? ? 1_555 A C 104 N4 ? ? A G 90 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A A 91 N1 ? ? ? 1_555 A U 103 N3 ? ? A A 91 A U 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A A 91 N6 ? ? ? 1_555 A U 103 O4 ? ? A A 91 A U 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? A G 92 N1 ? ? ? 1_555 A C 102 N3 ? ? A G 92 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? A G 92 N2 ? ? ? 1_555 A C 102 O2 ? ? A G 92 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? A G 92 O6 ? ? ? 1_555 A C 102 N4 ? ? A G 92 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? A U 93 N3 ? ? ? 1_555 A G 101 O6 ? ? A U 93 A G 101 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog153 hydrog ? ? A U 93 O2 ? ? ? 1_555 A G 101 N1 ? ? A U 93 A G 101 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog154 hydrog ? ? A G 114 N1 ? ? ? 1_555 A U 140 O2 ? ? A G 114 A U 140 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog155 hydrog ? ? A G 114 O6 ? ? ? 1_555 A U 140 N3 ? ? A G 114 A U 140 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog156 hydrog ? ? A G 115 N1 ? ? ? 1_555 A C 139 N3 ? ? A G 115 A C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog157 hydrog ? ? A G 115 N2 ? ? ? 1_555 A C 139 O2 ? ? A G 115 A C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? A G 115 O6 ? ? ? 1_555 A C 139 N4 ? ? A G 115 A C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? A G 116 N1 ? ? ? 1_555 A A 138 N1 ? ? A G 116 A A 138 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog160 hydrog ? ? A G 116 O6 ? ? ? 1_555 A A 138 N6 ? ? A G 116 A A 138 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog161 hydrog ? ? A G 117 N1 ? ? ? 1_555 A C 137 N3 ? ? A G 117 A C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? A G 117 N2 ? ? ? 1_555 A C 137 O2 ? ? A G 117 A C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? A G 117 O6 ? ? ? 1_555 A C 137 N4 ? ? A G 117 A C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? A G 118 N1 ? ? ? 1_555 A C 136 N3 ? ? A G 118 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? A G 118 N2 ? ? ? 1_555 A C 136 O2 ? ? A G 118 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? A G 118 O6 ? ? ? 1_555 A C 136 N4 ? ? A G 118 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? A U 119 N3 ? ? ? 1_555 A A 135 N1 ? ? A U 119 A A 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog168 hydrog ? ? A U 119 O4 ? ? ? 1_555 A A 135 N6 ? ? A U 119 A A 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? A A 120 N1 ? ? ? 1_555 A U 134 N3 ? ? A A 120 A U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? A A 120 N6 ? ? ? 1_555 A U 134 O4 ? ? A A 120 A U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog171 hydrog ? ? A U 121 N3 ? ? ? 1_555 A A 133 N1 ? ? A U 121 A A 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog172 hydrog ? ? A U 121 O4 ? ? ? 1_555 A A 133 N6 ? ? A U 121 A A 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog173 hydrog ? ? A G 122 N1 ? ? ? 1_555 A C 132 N3 ? ? A G 122 A C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? A G 122 N2 ? ? ? 1_555 A C 132 O2 ? ? A G 122 A C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? A G 122 O6 ? ? ? 1_555 A C 132 N4 ? ? A G 122 A C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? A G 123 N1 ? ? ? 1_555 A C 131 N3 ? ? A G 123 A C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog177 hydrog ? ? A G 123 N2 ? ? ? 1_555 A C 131 O2 ? ? A G 123 A C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog178 hydrog ? ? A G 123 O6 ? ? ? 1_555 A C 131 N4 ? ? A G 123 A C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog179 hydrog ? ? A G 124 N1 ? ? ? 1_555 A C 130 N3 ? ? A G 124 A C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog180 hydrog ? ? A G 124 N2 ? ? ? 1_555 A C 130 O2 ? ? A G 124 A C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog181 hydrog ? ? A G 124 O6 ? ? ? 1_555 A C 130 N4 ? ? A G 124 A C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog182 hydrog ? ? A G 125 N2 ? ? ? 1_555 A A 129 N7 ? ? A G 125 A A 129 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog183 hydrog ? ? A G 141 N1 ? ? ? 1_555 A A 162 N1 ? ? A G 141 A A 162 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog184 hydrog ? ? A G 141 O6 ? ? ? 1_555 A A 162 N6 ? ? A G 141 A A 162 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog185 hydrog ? ? A G 141 N2 ? ? ? 1_555 A G 163 O6 ? ? A G 141 A G 163 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog186 hydrog ? ? A U 142 N3 ? ? ? 1_555 A G 161 O6 ? ? A U 142 A G 161 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog187 hydrog ? ? A U 142 O2 ? ? ? 1_555 A G 161 N1 ? ? A U 142 A G 161 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog188 hydrog ? ? A C 143 N3 ? ? ? 1_555 A G 160 N1 ? ? A C 143 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog189 hydrog ? ? A C 143 N4 ? ? ? 1_555 A G 160 O6 ? ? A C 143 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog190 hydrog ? ? A C 143 O2 ? ? ? 1_555 A G 160 N2 ? ? A C 143 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog191 hydrog ? ? A A 144 N1 ? ? ? 1_555 A U 159 N3 ? ? A A 144 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog192 hydrog ? ? A A 144 N6 ? ? ? 1_555 A U 159 O4 ? ? A A 144 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog193 hydrog ? ? A C 145 N3 ? ? ? 1_555 A G 158 N1 ? ? A C 145 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog194 hydrog ? ? A C 145 N4 ? ? ? 1_555 A G 158 O6 ? ? A C 145 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog195 hydrog ? ? A C 145 O2 ? ? ? 1_555 A G 158 N2 ? ? A C 145 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog196 hydrog ? ? A G 146 N1 ? ? ? 1_555 A C 157 N3 ? ? A G 146 A C 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog197 hydrog ? ? A G 146 N2 ? ? ? 1_555 A C 157 O2 ? ? A G 146 A C 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog198 hydrog ? ? A G 146 O6 ? ? ? 1_555 A C 157 N4 ? ? A G 146 A C 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog199 hydrog ? ? A G 147 N1 ? ? ? 1_555 A C 156 N3 ? ? A G 147 A C 156 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog200 hydrog ? ? A G 147 N2 ? ? ? 1_555 A C 156 O2 ? ? A G 147 A C 156 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog201 hydrog ? ? A G 147 O6 ? ? ? 1_555 A C 156 N4 ? ? A G 147 A C 156 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog202 hydrog ? ? A A 148 N1 ? ? ? 1_555 A U 155 N3 ? ? A A 148 A U 155 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog203 hydrog ? ? A A 148 N6 ? ? ? 1_555 A U 155 O4 ? ? A A 148 A U 155 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog204 hydrog ? ? A G 149 N1 ? ? ? 1_555 A C 154 N3 ? ? A G 149 A C 154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog205 hydrog ? ? A G 149 N2 ? ? ? 1_555 A C 154 O2 ? ? A G 149 A C 154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog206 hydrog ? ? A G 149 O6 ? ? ? 1_555 A C 154 N4 ? ? A G 149 A C 154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 201 ? 2 'BINDING SITE FOR RESIDUE NA A 201' AC2 Software A NA 202 ? 2 'BINDING SITE FOR RESIDUE NA A 202' AC3 Software A NA 204 ? 2 'BINDING SITE FOR RESIDUE NA A 204' AC4 Software A NA 206 ? 2 'BINDING SITE FOR RESIDUE NA A 206' AC5 Software A NA 207 ? 2 'BINDING SITE FOR RESIDUE NA A 207' AC6 Software A LYS 175 ? 1 'BINDING SITE FOR RESIDUE LYS A 175' BC2 Software A TL 254 ? 2 'BINDING SITE FOR RESIDUE TL A 254' BC4 Software A TL 256 ? 1 'BINDING SITE FOR RESIDUE TL A 256' BC6 Software A TL 258 ? 2 'BINDING SITE FOR RESIDUE TL A 258' BC7 Software A TL 259 ? 2 'BINDING SITE FOR RESIDUE TL A 259' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 HOH V . ? HOH A 315 . ? 1_555 ? 2 AC1 2 HOH V . ? HOH A 414 . ? 1_555 ? 3 AC2 2 HOH V . ? HOH A 321 . ? 1_555 ? 4 AC2 2 HOH V . ? HOH A 344 . ? 1_555 ? 5 AC3 2 HOH V . ? HOH A 351 . ? 1_555 ? 6 AC3 2 HOH V . ? HOH A 352 . ? 1_555 ? 7 AC4 2 HOH V . ? HOH A 334 . ? 1_555 ? 8 AC4 2 HOH V . ? HOH A 417 . ? 1_555 ? 9 AC5 2 HOH V . ? HOH A 305 . ? 1_555 ? 10 AC5 2 HOH V . ? HOH A 417 . ? 1_555 ? 11 AC6 1 HOH V . ? HOH A 361 . ? 1_555 ? 12 BC2 2 HOH V . ? HOH A 348 . ? 1_555 ? 13 BC2 2 HOH V . ? HOH A 400 . ? 1_555 ? 14 BC4 1 HOH V . ? HOH A 341 . ? 1_555 ? 15 BC6 2 HOH V . ? HOH A 328 . ? 1_555 ? 16 BC6 2 HOH V . ? HOH A 345 . ? 1_555 ? 17 BC7 2 LYS J . ? LYS A 175 . ? 1_555 ? 18 BC7 2 HOH V . ? HOH A 335 . ? 1_555 ? # _database_PDB_matrix.entry_id 3DJ2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DJ2 _atom_sites.fract_transf_matrix[1][1] 0.018489 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012698 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007093 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P TL # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 C 4 4 4 C C A . n A 1 5 G 5 5 5 G G A . n A 1 6 A 6 6 6 A A A . n A 1 7 C 7 7 7 C C A . n A 1 8 G 8 8 8 G G A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 G 12 12 12 G G A . n A 1 13 C 13 13 13 C C A . n A 1 14 G 14 14 14 G G A . n A 1 15 C 15 15 15 C C A . n A 1 16 G 16 16 16 G G A . n A 1 17 C 17 17 17 C C A . n A 1 18 C 18 18 18 C C A . n A 1 19 C 19 19 19 C C A . n A 1 20 G 20 20 20 G G A . n A 1 21 A 21 21 21 A A A . n A 1 22 G 22 22 22 G G A . n A 1 23 A 23 23 23 A A A . n A 1 24 U 24 24 24 U U A . n A 1 25 G 25 25 25 G G A . n A 1 26 A 26 26 26 A A A . n A 1 27 G 27 27 27 G G A . n A 1 28 U 28 28 28 U U A . n A 1 29 A 29 29 29 A A A . n A 1 30 G 30 30 30 G G A . n A 1 31 G 31 31 31 G G A . n A 1 32 C 32 32 32 C C A . n A 1 33 U 33 33 33 U U A . n A 1 34 G 34 34 34 G G A . n A 1 35 U 35 35 35 U U A . n A 1 36 C 36 36 36 C C A . n A 1 37 C 37 37 37 C C A . n A 1 38 C 38 38 38 C C A . n A 1 39 A 39 39 39 A A A . n A 1 40 U 40 40 40 U U A . n A 1 41 C 41 41 41 C C A . n A 1 42 A 42 42 42 A A A . n A 1 43 G 43 43 43 G G A . n A 1 44 G 44 44 44 G G A . n A 1 45 G 45 45 45 G G A . n A 1 46 G 46 46 46 G G A . n A 1 47 A 47 47 47 A A A . n A 1 48 G 48 48 48 G G A . n A 1 49 G 49 49 49 G G A . n A 1 50 A 50 50 50 A A A . n A 1 51 A 51 51 51 A A A . n A 1 52 U 52 52 52 U U A . n A 1 53 C 53 53 53 C C A . n A 1 54 G 54 54 54 G G A . n A 1 55 G 55 55 55 G G A . n A 1 56 G 56 56 56 G G A . n A 1 57 G 57 57 57 G G A . n A 1 58 A 58 58 58 A A A . n A 1 59 C 59 59 59 C C A . n A 1 60 G 60 60 60 G G A . n A 1 61 G 61 61 61 G G A . n A 1 62 C 62 62 62 C C A . n A 1 63 U 63 63 63 U U A . n A 1 64 G 64 64 64 G G A . n A 1 65 A 65 65 65 A A A . n A 1 66 A 66 66 66 A A A . n A 1 67 A 67 67 67 A A A . n A 1 68 G 68 68 68 G G A . n A 1 69 G 69 69 69 G G A . n A 1 70 C 70 70 70 C C A . n A 1 71 G 71 71 71 G G A . n A 1 72 A 72 72 72 A A A . n A 1 73 G 73 73 73 G G A . n A 1 74 G 74 74 74 G G A . n A 1 75 G 75 75 75 G G A . n A 1 76 C 76 76 76 C C A . n A 1 77 G 77 77 77 G G A . n A 1 78 C 78 78 78 C C A . n A 1 79 C 79 79 79 C C A . n A 1 80 G 80 80 80 G G A . n A 1 81 A 81 81 81 A A A . n A 1 82 A 82 82 82 A A A . n A 1 83 G 83 83 83 G G A . n A 1 84 G 84 84 84 G G A . n A 1 85 G 85 85 85 G G A . n A 1 86 U 86 86 86 U U A . n A 1 87 G 87 87 87 G G A . n A 1 88 C 88 88 88 C C A . n A 1 89 A 89 89 89 A A A . n A 1 90 G 90 90 90 G G A . n A 1 91 A 91 91 91 A A A . n A 1 92 G 92 92 92 G G A . n A 1 93 U 93 93 93 U U A . n A 1 94 U 94 94 94 U U A . n A 1 95 C 95 95 95 C C A . n A 1 96 C 96 96 96 C C A . n A 1 97 U 97 97 97 U U A . n A 1 98 C 98 98 98 C C A . n A 1 99 C 99 99 99 C C A . n A 1 100 C 100 100 100 C C A . n A 1 101 G 101 101 101 G G A . n A 1 102 C 102 102 102 C C A . n A 1 103 U 103 103 103 U U A . n A 1 104 C 104 104 104 C C A . n A 1 105 U 105 105 105 U U A . n A 1 106 G 106 106 106 G G A . n A 1 107 C 107 107 107 C C A . n A 1 108 A 108 108 108 A A A . n A 1 109 U 109 109 109 U U A . n A 1 110 G 110 110 110 G G A . n A 1 111 C 111 111 111 C C A . n A 1 112 C 112 112 112 C C A . n A 1 113 U 113 113 113 U U A . n A 1 114 G 114 114 114 G G A . n A 1 115 G 115 115 115 G G A . n A 1 116 G 116 116 116 G G A . n A 1 117 G 117 117 117 G G A . n A 1 118 G 118 118 118 G G A . n A 1 119 U 119 119 119 U U A . n A 1 120 A 120 120 120 A A A . n A 1 121 U 121 121 121 U U A . n A 1 122 G 122 122 122 G G A . n A 1 123 G 123 123 123 G G A . n A 1 124 G 124 124 124 G G A . n A 1 125 G 125 125 125 G G A . n A 1 126 A 126 126 126 A A A . n A 1 127 A 127 127 127 A A A . n A 1 128 U 128 128 128 U U A . n A 1 129 A 129 129 129 A A A . n A 1 130 C 130 130 130 C C A . n A 1 131 C 131 131 131 C C A . n A 1 132 C 132 132 132 C C A . n A 1 133 A 133 133 133 A A A . n A 1 134 U 134 134 134 U U A . n A 1 135 A 135 135 135 A A A . n A 1 136 C 136 136 136 C C A . n A 1 137 C 137 137 137 C C A . n A 1 138 A 138 138 138 A A A . n A 1 139 C 139 139 139 C C A . n A 1 140 U 140 140 140 U U A . n A 1 141 G 141 141 141 G G A . n A 1 142 U 142 142 142 U U A . n A 1 143 C 143 143 143 C C A . n A 1 144 A 144 144 144 A A A . n A 1 145 C 145 145 145 C C A . n A 1 146 G 146 146 146 G G A . n A 1 147 G 147 147 147 G G A . n A 1 148 A 148 148 148 A A A . n A 1 149 G 149 149 149 G G A . n A 1 150 G 150 150 150 G G A . n A 1 151 U 151 151 151 U U A . n A 1 152 C 152 152 152 C C A . n A 1 153 U 153 153 153 U U A . n A 1 154 C 154 154 154 C C A . n A 1 155 U 155 155 155 U U A . n A 1 156 C 156 156 156 C C A . n A 1 157 C 157 157 157 C C A . n A 1 158 G 158 158 158 G G A . n A 1 159 U 159 159 159 U U A . n A 1 160 G 160 160 160 G G A . n A 1 161 G 161 161 161 G G A . n A 1 162 A 162 162 162 A A A . n A 1 163 G 163 163 163 G G A . n A 1 164 A 164 164 164 A A A . n A 1 165 G 165 165 165 G G A . n A 1 166 C 166 166 166 C C A . n A 1 167 C 167 167 167 C C A . n A 1 168 G 168 168 168 G G A . n A 1 169 U 169 169 169 U U A . n A 1 170 C 170 170 170 C C A . n A 1 171 G 171 171 171 G G A . n A 1 172 G 172 172 172 G G A . n A 1 173 U 173 173 173 U U A . n A 1 174 CCC 174 174 174 CCC CCC A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 201 201 NA NA A . C 2 NA 1 202 202 NA NA A . D 2 NA 1 203 203 NA NA A . E 2 NA 1 204 204 NA NA A . F 2 NA 1 205 205 NA NA A . G 2 NA 1 206 206 NA NA A . H 2 NA 1 207 207 NA NA A . I 2 NA 1 208 208 NA NA A . J 3 LYS 1 175 175 LYS LYS A . K 4 TL 1 250 250 TL TL A . L 4 TL 1 251 251 TL TL A . M 4 TL 1 252 252 TL TL A . N 4 TL 1 253 253 TL TL A . O 4 TL 1 254 254 TL TL A . P 4 TL 1 255 255 TL TL A . Q 4 TL 1 256 256 TL TL A . R 4 TL 1 257 257 TL TL A . S 4 TL 1 258 258 TL TL A . T 4 TL 1 259 259 TL TL A . U 5 IPA 1 290 290 IPA IPA A . V 6 HOH 1 300 300 HOH HOH A . V 6 HOH 2 301 301 HOH HOH A . V 6 HOH 3 302 302 HOH HOH A . V 6 HOH 4 303 303 HOH HOH A . V 6 HOH 5 304 304 HOH HOH A . V 6 HOH 6 305 305 HOH HOH A . V 6 HOH 7 306 306 HOH HOH A . V 6 HOH 8 307 307 HOH HOH A . V 6 HOH 9 308 308 HOH HOH A . V 6 HOH 10 309 309 HOH HOH A . V 6 HOH 11 310 310 HOH HOH A . V 6 HOH 12 311 311 HOH HOH A . V 6 HOH 13 312 312 HOH HOH A . V 6 HOH 14 313 313 HOH HOH A . V 6 HOH 15 314 314 HOH HOH A . V 6 HOH 16 315 315 HOH HOH A . V 6 HOH 17 316 316 HOH HOH A . V 6 HOH 18 317 317 HOH HOH A . V 6 HOH 19 318 318 HOH HOH A . V 6 HOH 20 319 319 HOH HOH A . V 6 HOH 21 320 320 HOH HOH A . V 6 HOH 22 321 321 HOH HOH A . V 6 HOH 23 322 322 HOH HOH A . V 6 HOH 24 323 323 HOH HOH A . V 6 HOH 25 324 324 HOH HOH A . V 6 HOH 26 325 325 HOH HOH A . V 6 HOH 27 326 326 HOH HOH A . V 6 HOH 28 327 327 HOH HOH A . V 6 HOH 29 328 328 HOH HOH A . V 6 HOH 30 329 329 HOH HOH A . V 6 HOH 31 330 330 HOH HOH A . V 6 HOH 32 331 331 HOH HOH A . V 6 HOH 33 332 332 HOH HOH A . V 6 HOH 34 333 333 HOH HOH A . V 6 HOH 35 334 334 HOH HOH A . V 6 HOH 36 335 335 HOH HOH A . V 6 HOH 37 336 336 HOH HOH A . V 6 HOH 38 337 337 HOH HOH A . V 6 HOH 39 338 338 HOH HOH A . V 6 HOH 40 339 339 HOH HOH A . V 6 HOH 41 340 340 HOH HOH A . V 6 HOH 42 341 341 HOH HOH A . V 6 HOH 43 342 342 HOH HOH A . V 6 HOH 44 343 343 HOH HOH A . V 6 HOH 45 344 344 HOH HOH A . V 6 HOH 46 345 345 HOH HOH A . V 6 HOH 47 346 346 HOH HOH A . V 6 HOH 48 347 347 HOH HOH A . V 6 HOH 49 348 348 HOH HOH A . V 6 HOH 50 349 349 HOH HOH A . V 6 HOH 51 350 350 HOH HOH A . V 6 HOH 52 351 351 HOH HOH A . V 6 HOH 53 352 352 HOH HOH A . V 6 HOH 54 353 353 HOH HOH A . V 6 HOH 55 354 354 HOH HOH A . V 6 HOH 56 355 355 HOH HOH A . V 6 HOH 57 356 356 HOH HOH A . V 6 HOH 58 357 357 HOH HOH A . V 6 HOH 59 358 358 HOH HOH A . V 6 HOH 60 359 359 HOH HOH A . V 6 HOH 61 360 360 HOH HOH A . V 6 HOH 62 361 361 HOH HOH A . V 6 HOH 63 362 362 HOH HOH A . V 6 HOH 64 363 363 HOH HOH A . V 6 HOH 65 364 364 HOH HOH A . V 6 HOH 66 365 365 HOH HOH A . V 6 HOH 67 366 366 HOH HOH A . V 6 HOH 68 367 367 HOH HOH A . V 6 HOH 69 368 368 HOH HOH A . V 6 HOH 70 369 369 HOH HOH A . V 6 HOH 71 370 370 HOH HOH A . V 6 HOH 72 371 371 HOH HOH A . V 6 HOH 73 372 372 HOH HOH A . V 6 HOH 74 373 373 HOH HOH A . V 6 HOH 75 374 374 HOH HOH A . V 6 HOH 76 375 375 HOH HOH A . V 6 HOH 77 376 376 HOH HOH A . V 6 HOH 78 377 377 HOH HOH A . V 6 HOH 79 378 378 HOH HOH A . V 6 HOH 80 379 379 HOH HOH A . V 6 HOH 81 380 380 HOH HOH A . V 6 HOH 82 381 381 HOH HOH A . V 6 HOH 83 382 382 HOH HOH A . V 6 HOH 84 383 383 HOH HOH A . V 6 HOH 85 384 384 HOH HOH A . V 6 HOH 86 385 385 HOH HOH A . V 6 HOH 87 386 386 HOH HOH A . V 6 HOH 88 387 387 HOH HOH A . V 6 HOH 89 388 388 HOH HOH A . V 6 HOH 90 389 389 HOH HOH A . V 6 HOH 91 390 390 HOH HOH A . V 6 HOH 92 391 391 HOH HOH A . V 6 HOH 93 392 392 HOH HOH A . V 6 HOH 94 393 393 HOH HOH A . V 6 HOH 95 394 394 HOH HOH A . V 6 HOH 96 395 395 HOH HOH A . V 6 HOH 97 396 396 HOH HOH A . V 6 HOH 98 397 397 HOH HOH A . V 6 HOH 99 398 398 HOH HOH A . V 6 HOH 100 399 399 HOH HOH A . V 6 HOH 101 400 400 HOH HOH A . V 6 HOH 102 401 401 HOH HOH A . V 6 HOH 103 402 402 HOH HOH A . V 6 HOH 104 403 403 HOH HOH A . V 6 HOH 105 404 404 HOH HOH A . V 6 HOH 106 405 405 HOH HOH A . V 6 HOH 107 406 406 HOH HOH A . V 6 HOH 108 407 407 HOH HOH A . V 6 HOH 109 408 408 HOH HOH A . V 6 HOH 110 409 409 HOH HOH A . V 6 HOH 111 410 410 HOH HOH A . V 6 HOH 112 411 411 HOH HOH A . V 6 HOH 113 412 412 HOH HOH A . V 6 HOH 114 413 413 HOH HOH A . V 6 HOH 115 414 414 HOH HOH A . V 6 HOH 116 415 415 HOH HOH A . V 6 HOH 117 416 416 HOH HOH A . V 6 HOH 118 417 417 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CCC _pdbx_struct_mod_residue.label_seq_id 174 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CCC _pdbx_struct_mod_residue.auth_seq_id 174 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id C _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 9 ? A G 9 ? 1_555 NA ? G NA . ? A NA 206 ? 1_555 O ? V HOH . ? A HOH 334 ? 1_555 78.9 ? 2 O6 ? A G 9 ? A G 9 ? 1_555 NA ? G NA . ? A NA 206 ? 1_555 O ? V HOH . ? A HOH 417 ? 1_555 132.9 ? 3 O ? V HOH . ? A HOH 334 ? 1_555 NA ? G NA . ? A NA 206 ? 1_555 O ? V HOH . ? A HOH 417 ? 1_555 122.1 ? 4 OP2 ? A G 11 ? A G 11 ? 1_555 NA ? E NA . ? A NA 204 ? 1_555 O6 ? A G 12 ? A G 12 ? 1_555 72.9 ? 5 OP2 ? A G 11 ? A G 11 ? 1_555 NA ? E NA . ? A NA 204 ? 1_555 O ? V HOH . ? A HOH 351 ? 1_555 78.7 ? 6 O6 ? A G 12 ? A G 12 ? 1_555 NA ? E NA . ? A NA 204 ? 1_555 O ? V HOH . ? A HOH 351 ? 1_555 79.5 ? 7 OP2 ? A G 11 ? A G 11 ? 1_555 NA ? E NA . ? A NA 204 ? 1_555 O ? V HOH . ? A HOH 352 ? 1_555 105.1 ? 8 O6 ? A G 12 ? A G 12 ? 1_555 NA ? E NA . ? A NA 204 ? 1_555 O ? V HOH . ? A HOH 352 ? 1_555 177.3 ? 9 O ? V HOH . ? A HOH 351 ? 1_555 NA ? E NA . ? A NA 204 ? 1_555 O ? V HOH . ? A HOH 352 ? 1_555 98.4 ? 10 O6 ? A G 20 ? A G 20 ? 1_555 NA ? C NA . ? A NA 202 ? 1_555 O6 ? A G 71 ? A G 71 ? 1_555 76.7 ? 11 O6 ? A G 20 ? A G 20 ? 1_555 NA ? C NA . ? A NA 202 ? 1_555 O ? V HOH . ? A HOH 321 ? 1_555 79.3 ? 12 O6 ? A G 71 ? A G 71 ? 1_555 NA ? C NA . ? A NA 202 ? 1_555 O ? V HOH . ? A HOH 321 ? 1_555 94.5 ? 13 O6 ? A G 20 ? A G 20 ? 1_555 NA ? C NA . ? A NA 202 ? 1_555 O ? V HOH . ? A HOH 344 ? 1_555 81.2 ? 14 O6 ? A G 71 ? A G 71 ? 1_555 NA ? C NA . ? A NA 202 ? 1_555 O ? V HOH . ? A HOH 344 ? 1_555 73.0 ? 15 O ? V HOH . ? A HOH 321 ? 1_555 NA ? C NA . ? A NA 202 ? 1_555 O ? V HOH . ? A HOH 344 ? 1_555 158.8 ? 16 O ? V HOH . ? A HOH 315 ? 1_555 NA ? B NA . ? A NA 201 ? 1_555 O ? V HOH . ? A HOH 414 ? 1_555 109.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.value' 6 3 'Structure model' '_struct_conn.pdbx_dist_value' 7 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 9 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 10 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 11 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 29.4430 -1.7580 18.7320 -0.0229 -0.0452 -0.0659 0.0456 -0.0055 -0.0239 0.8748 4.1174 2.0234 1.3588 0.0380 -1.1645 0.0161 0.2114 -0.1710 -0.6072 0.0180 -0.1445 0.4610 -0.2039 -0.0341 'X-RAY DIFFRACTION' 2 ? refined 7.0870 47.2050 20.9690 0.0612 0.0078 0.1049 0.1059 0.0030 0.0447 1.1460 0.5917 1.4457 0.1738 0.4809 0.4632 -0.2105 0.0729 0.5113 -0.0083 -0.0102 0.1118 -0.6279 -0.3402 0.2207 'X-RAY DIFFRACTION' 3 ? refined 8.6470 27.1570 11.0520 -0.1029 -0.0099 -0.0298 0.0315 -0.0249 -0.0157 3.0894 0.6950 0.9643 -1.3370 1.1069 -0.7350 0.1073 0.3509 -0.1870 -0.0142 -0.0947 0.2587 -0.0936 -0.0295 -0.0126 'X-RAY DIFFRACTION' 4 ? refined 29.7300 33.6540 15.0110 -0.1282 -0.0262 -0.0349 0.0151 -0.0045 0.0402 2.4101 1.6933 0.6716 -1.8954 0.2498 -0.1075 0.1284 0.4148 0.4176 -0.1260 -0.2288 -0.3463 -0.1127 0.0268 0.1004 'X-RAY DIFFRACTION' 5 ? refined 50.2890 8.6920 15.5880 -0.0483 -0.0260 0.2205 0.0596 0.0379 0.0657 9.6632 1.3311 1.8151 2.0738 -0.9979 0.4672 -0.2863 -0.3101 -1.1529 0.2065 -0.0884 -0.4928 0.2735 0.1952 0.3747 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 1 A 11 A 11 ? 'X-RAY DIFFRACTION' ? 2 1 A 163 A 163 A 174 A 174 ? 'X-RAY DIFFRACTION' ? 3 2 A 12 A 12 A 79 A 79 ? 'X-RAY DIFFRACTION' ? 4 3 A 80 A 80 A 113 A 113 ? 'X-RAY DIFFRACTION' ? 5 4 A 114 A 114 A 140 A 140 ? 'X-RAY DIFFRACTION' ? 6 5 A 141 A 141 A 162 A 162 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 CBASS 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 REFMAC phasing . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.486 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.121 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C1'" A U 153 ? ? "O4'" A U 153 ? ? "C4'" A U 153 ? ? 103.92 109.70 -5.78 0.70 N 2 1 "O4'" A U 153 ? ? "C1'" A U 153 ? ? N1 A U 153 ? ? 113.55 108.50 5.05 0.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CCC PC P N S 73 CCC O1C O N N 74 CCC O2C O N N 75 CCC P P N N 76 CCC OP1 O N N 77 CCC OP2 O N N 78 CCC OP3 O N N 79 CCC "O5'" O N N 80 CCC "C5'" C N N 81 CCC "C4'" C N R 82 CCC "O4'" O N N 83 CCC "C3'" C N R 84 CCC "O3'" O N N 85 CCC "C2'" C N R 86 CCC "O2'" O N N 87 CCC "C1'" C N R 88 CCC N1 N N N 89 CCC C2 C N N 90 CCC O2 O N N 91 CCC N3 N N N 92 CCC C4 C N N 93 CCC N4 N N N 94 CCC C5 C N N 95 CCC C6 C N N 96 CCC HOC2 H N N 97 CCC HOP2 H N N 98 CCC HOP3 H N N 99 CCC "H5'" H N N 100 CCC "H5''" H N N 101 CCC "H4'" H N N 102 CCC "H3'" H N N 103 CCC "H2'" H N N 104 CCC "H1'" H N N 105 CCC H41 H N N 106 CCC H42 H N N 107 CCC H5 H N N 108 CCC H6 H N N 109 G OP3 O N N 110 G P P N N 111 G OP1 O N N 112 G OP2 O N N 113 G "O5'" O N N 114 G "C5'" C N N 115 G "C4'" C N R 116 G "O4'" O N N 117 G "C3'" C N S 118 G "O3'" O N N 119 G "C2'" C N R 120 G "O2'" O N N 121 G "C1'" C N R 122 G N9 N Y N 123 G C8 C Y N 124 G N7 N Y N 125 G C5 C Y N 126 G C6 C N N 127 G O6 O N N 128 G N1 N N N 129 G C2 C N N 130 G N2 N N N 131 G N3 N N N 132 G C4 C Y N 133 G HOP3 H N N 134 G HOP2 H N N 135 G "H5'" H N N 136 G "H5''" H N N 137 G "H4'" H N N 138 G "H3'" H N N 139 G "HO3'" H N N 140 G "H2'" H N N 141 G "HO2'" H N N 142 G "H1'" H N N 143 G H8 H N N 144 G H1 H N N 145 G H21 H N N 146 G H22 H N N 147 HOH O O N N 148 HOH H1 H N N 149 HOH H2 H N N 150 IPA C1 C N N 151 IPA C2 C N N 152 IPA C3 C N N 153 IPA O2 O N N 154 IPA H11 H N N 155 IPA H12 H N N 156 IPA H13 H N N 157 IPA H2 H N N 158 IPA H31 H N N 159 IPA H32 H N N 160 IPA H33 H N N 161 IPA HO2 H N N 162 LYS N N N N 163 LYS CA C N S 164 LYS C C N N 165 LYS O O N N 166 LYS CB C N N 167 LYS CG C N N 168 LYS CD C N N 169 LYS CE C N N 170 LYS NZ N N N 171 LYS OXT O N N 172 LYS H H N N 173 LYS H2 H N N 174 LYS HA H N N 175 LYS HB2 H N N 176 LYS HB3 H N N 177 LYS HG2 H N N 178 LYS HG3 H N N 179 LYS HD2 H N N 180 LYS HD3 H N N 181 LYS HE2 H N N 182 LYS HE3 H N N 183 LYS HZ1 H N N 184 LYS HZ2 H N N 185 LYS HZ3 H N N 186 LYS HXT H N N 187 NA NA NA N N 188 TL TL TL N N 189 U OP3 O N N 190 U P P N N 191 U OP1 O N N 192 U OP2 O N N 193 U "O5'" O N N 194 U "C5'" C N N 195 U "C4'" C N R 196 U "O4'" O N N 197 U "C3'" C N S 198 U "O3'" O N N 199 U "C2'" C N R 200 U "O2'" O N N 201 U "C1'" C N R 202 U N1 N N N 203 U C2 C N N 204 U O2 O N N 205 U N3 N N N 206 U C4 C N N 207 U O4 O N N 208 U C5 C N N 209 U C6 C N N 210 U HOP3 H N N 211 U HOP2 H N N 212 U "H5'" H N N 213 U "H5''" H N N 214 U "H4'" H N N 215 U "H3'" H N N 216 U "HO3'" H N N 217 U "H2'" H N N 218 U "HO2'" H N N 219 U "H1'" H N N 220 U H3 H N N 221 U H5 H N N 222 U H6 H N N 223 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 CCC PC O1C doub N N 76 CCC PC O2C sing N N 77 CCC PC "O3'" sing N N 78 CCC PC "O2'" sing N N 79 CCC O2C HOC2 sing N N 80 CCC P OP1 doub N N 81 CCC P OP2 sing N N 82 CCC P OP3 sing N N 83 CCC P "O5'" sing N N 84 CCC OP2 HOP2 sing N N 85 CCC OP3 HOP3 sing N N 86 CCC "O5'" "C5'" sing N N 87 CCC "C5'" "C4'" sing N N 88 CCC "C5'" "H5'" sing N N 89 CCC "C5'" "H5''" sing N N 90 CCC "C4'" "O4'" sing N N 91 CCC "C4'" "C3'" sing N N 92 CCC "C4'" "H4'" sing N N 93 CCC "O4'" "C1'" sing N N 94 CCC "C3'" "O3'" sing N N 95 CCC "C3'" "C2'" sing N N 96 CCC "C3'" "H3'" sing N N 97 CCC "C2'" "O2'" sing N N 98 CCC "C2'" "C1'" sing N N 99 CCC "C2'" "H2'" sing N N 100 CCC "C1'" N1 sing N N 101 CCC "C1'" "H1'" sing N N 102 CCC N1 C2 sing N N 103 CCC N1 C6 sing N N 104 CCC C2 O2 doub N N 105 CCC C2 N3 sing N N 106 CCC N3 C4 doub N N 107 CCC C4 N4 sing N N 108 CCC C4 C5 sing N N 109 CCC N4 H41 sing N N 110 CCC N4 H42 sing N N 111 CCC C5 C6 doub N N 112 CCC C5 H5 sing N N 113 CCC C6 H6 sing N N 114 G OP3 P sing N N 115 G OP3 HOP3 sing N N 116 G P OP1 doub N N 117 G P OP2 sing N N 118 G P "O5'" sing N N 119 G OP2 HOP2 sing N N 120 G "O5'" "C5'" sing N N 121 G "C5'" "C4'" sing N N 122 G "C5'" "H5'" sing N N 123 G "C5'" "H5''" sing N N 124 G "C4'" "O4'" sing N N 125 G "C4'" "C3'" sing N N 126 G "C4'" "H4'" sing N N 127 G "O4'" "C1'" sing N N 128 G "C3'" "O3'" sing N N 129 G "C3'" "C2'" sing N N 130 G "C3'" "H3'" sing N N 131 G "O3'" "HO3'" sing N N 132 G "C2'" "O2'" sing N N 133 G "C2'" "C1'" sing N N 134 G "C2'" "H2'" sing N N 135 G "O2'" "HO2'" sing N N 136 G "C1'" N9 sing N N 137 G "C1'" "H1'" sing N N 138 G N9 C8 sing Y N 139 G N9 C4 sing Y N 140 G C8 N7 doub Y N 141 G C8 H8 sing N N 142 G N7 C5 sing Y N 143 G C5 C6 sing N N 144 G C5 C4 doub Y N 145 G C6 O6 doub N N 146 G C6 N1 sing N N 147 G N1 C2 sing N N 148 G N1 H1 sing N N 149 G C2 N2 sing N N 150 G C2 N3 doub N N 151 G N2 H21 sing N N 152 G N2 H22 sing N N 153 G N3 C4 sing N N 154 HOH O H1 sing N N 155 HOH O H2 sing N N 156 IPA C1 C2 sing N N 157 IPA C1 H11 sing N N 158 IPA C1 H12 sing N N 159 IPA C1 H13 sing N N 160 IPA C2 C3 sing N N 161 IPA C2 O2 sing N N 162 IPA C2 H2 sing N N 163 IPA C3 H31 sing N N 164 IPA C3 H32 sing N N 165 IPA C3 H33 sing N N 166 IPA O2 HO2 sing N N 167 LYS N CA sing N N 168 LYS N H sing N N 169 LYS N H2 sing N N 170 LYS CA C sing N N 171 LYS CA CB sing N N 172 LYS CA HA sing N N 173 LYS C O doub N N 174 LYS C OXT sing N N 175 LYS CB CG sing N N 176 LYS CB HB2 sing N N 177 LYS CB HB3 sing N N 178 LYS CG CD sing N N 179 LYS CG HG2 sing N N 180 LYS CG HG3 sing N N 181 LYS CD CE sing N N 182 LYS CD HD2 sing N N 183 LYS CD HD3 sing N N 184 LYS CE NZ sing N N 185 LYS CE HE2 sing N N 186 LYS CE HE3 sing N N 187 LYS NZ HZ1 sing N N 188 LYS NZ HZ2 sing N N 189 LYS NZ HZ3 sing N N 190 LYS OXT HXT sing N N 191 U OP3 P sing N N 192 U OP3 HOP3 sing N N 193 U P OP1 doub N N 194 U P OP2 sing N N 195 U P "O5'" sing N N 196 U OP2 HOP2 sing N N 197 U "O5'" "C5'" sing N N 198 U "C5'" "C4'" sing N N 199 U "C5'" "H5'" sing N N 200 U "C5'" "H5''" sing N N 201 U "C4'" "O4'" sing N N 202 U "C4'" "C3'" sing N N 203 U "C4'" "H4'" sing N N 204 U "O4'" "C1'" sing N N 205 U "C3'" "O3'" sing N N 206 U "C3'" "C2'" sing N N 207 U "C3'" "H3'" sing N N 208 U "O3'" "HO3'" sing N N 209 U "C2'" "O2'" sing N N 210 U "C2'" "C1'" sing N N 211 U "C2'" "H2'" sing N N 212 U "O2'" "HO2'" sing N N 213 U "C1'" N1 sing N N 214 U "C1'" "H1'" sing N N 215 U N1 C2 sing N N 216 U N1 C6 sing N N 217 U C2 O2 doub N N 218 U C2 N3 sing N N 219 U N3 C4 sing N N 220 U N3 H3 sing N N 221 U C4 O4 doub N N 222 U C4 C5 sing N N 223 U C5 C6 doub N N 224 U C5 H5 sing N N 225 U C6 H6 sing N N 226 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3DJ2 'double helix' 3DJ2 'a-form double helix' 3DJ2 'hairpin loop' 3DJ2 'bulge loop' 3DJ2 'mismatched base pair' 3DJ2 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A CCC 174 1_555 0.033 -0.154 0.139 7.447 -6.740 -3.456 1 A_G1:CCC174_A A 1 ? A 174 ? 19 1 1 A G 2 1_555 A U 173 1_555 -2.469 -0.489 0.086 6.213 -14.866 3.231 2 A_G2:U173_A A 2 ? A 173 ? 28 ? 1 A C 3 1_555 A G 172 1_555 0.162 -0.218 0.274 3.785 -18.486 0.270 3 A_C3:G172_A A 3 ? A 172 ? 19 1 1 A C 4 1_555 A G 171 1_555 0.239 -0.161 0.082 2.287 -13.611 0.635 4 A_C4:G171_A A 4 ? A 171 ? 19 1 1 A G 5 1_555 A C 170 1_555 0.050 -0.069 0.227 0.892 -10.765 1.797 5 A_G5:C170_A A 5 ? A 170 ? 19 1 1 A A 6 1_555 A U 169 1_555 0.065 -0.003 0.108 6.276 -15.277 -0.314 6 A_A6:U169_A A 6 ? A 169 ? 20 1 1 A C 7 1_555 A G 168 1_555 0.141 -0.155 -0.029 9.098 -21.157 5.204 7 A_C7:G168_A A 7 ? A 168 ? 19 1 1 A G 8 1_555 A C 167 1_555 -0.109 -0.260 0.024 -9.963 -18.871 0.500 8 A_G8:C167_A A 8 ? A 167 ? 19 1 1 A G 9 1_555 A C 166 1_555 -0.303 -0.098 -0.018 -19.766 -21.141 -3.756 9 A_G9:C166_A A 9 ? A 166 ? 19 1 1 A A 10 1_555 A G 165 1_555 0.027 1.554 0.310 -16.799 -7.257 -17.022 10 A_A10:G165_A A 10 ? A 165 ? 8 ? 1 A G 11 1_555 A G 163 1_555 -5.452 -0.299 -0.144 -7.833 1.865 -112.521 11 A_G11:G163_A A 11 ? A 163 ? 7 ? 1 A G 12 1_555 A C 79 1_555 -0.290 -0.330 -0.552 8.189 24.612 -7.047 12 A_G12:C79_A A 12 ? A 79 ? 19 1 1 A G 14 1_555 A C 78 1_555 -0.628 -0.295 -0.158 -2.500 -9.598 1.702 13 A_G14:C78_A A 14 ? A 78 ? 19 1 1 A C 15 1_555 A G 77 1_555 0.005 -0.259 -0.180 7.441 -13.051 -0.212 14 A_C15:G77_A A 15 ? A 77 ? 19 1 1 A G 16 1_555 A C 76 1_555 -0.344 -0.206 -0.117 -2.288 -11.766 -1.379 15 A_G16:C76_A A 16 ? A 76 ? 19 1 1 A C 17 1_555 A G 75 1_555 0.217 -0.338 0.052 2.288 -14.598 -2.060 16 A_C17:G75_A A 17 ? A 75 ? 19 1 1 A C 18 1_555 A G 74 1_555 0.242 -0.155 0.348 -6.152 -4.790 0.454 17 A_C18:G74_A A 18 ? A 74 ? 19 1 1 A C 19 1_555 A G 73 1_555 0.173 -0.133 0.137 -1.900 -2.537 -2.128 18 A_C19:G73_A A 19 ? A 73 ? 19 1 1 A G 20 1_555 A A 72 1_555 6.507 -4.380 -0.103 -20.334 -19.340 1.468 19 A_G20:A72_A A 20 ? A 72 ? 11 10 1 A A 21 1_555 A G 71 1_555 -6.891 -4.517 -0.155 -1.531 -11.293 -8.468 20 A_A21:G71_A A 21 ? A 71 ? 11 10 1 A G 22 1_555 A C 70 1_555 -0.211 -0.166 -0.098 -1.343 -4.245 -2.708 21 A_G22:C70_A A 22 ? A 70 ? 19 1 1 A A 23 1_555 A G 69 1_555 0.044 1.343 -0.886 -4.161 -10.469 -17.491 22 A_A23:G69_A A 23 ? A 69 ? 8 ? 1 A A 126 1_555 A G 68 1_555 -0.028 -4.476 1.022 -22.433 -33.184 86.454 23 A_A126:G68_A A 126 ? A 68 ? 9 3 1 A G 25 1_555 A A 67 1_555 6.879 -4.828 -0.276 -5.653 -15.237 -14.063 24 A_G25:A67_A A 25 ? A 67 ? ? 10 1 A A 26 1_555 A A 66 1_555 -6.229 5.216 0.098 -16.537 2.045 -171.706 25 A_A26:A66_A A 26 ? A 66 ? 2 8 1 A U 28 1_555 A A 65 1_555 4.162 -2.231 -0.336 5.617 -14.515 -101.050 26 A_U28:A65_A A 28 ? A 65 ? 24 4 1 A A 29 1_555 A G 64 1_555 -6.738 -4.249 -0.237 0.511 -8.069 -0.361 27 A_A29:G64_A A 29 ? A 64 ? 11 10 1 A G 30 1_555 A U 63 1_555 -2.542 -0.653 -0.104 5.541 -14.619 1.170 28 A_G30:U63_A A 30 ? A 63 ? 28 ? 1 A G 31 1_555 A C 62 1_555 -0.470 -0.066 -0.460 0.475 -14.684 4.652 29 A_G31:C62_A A 31 ? A 62 ? 19 1 1 A C 32 1_555 A G 61 1_555 0.650 -0.252 -0.206 4.546 -13.875 -1.932 30 A_C32:G61_A A 32 ? A 61 ? 19 1 1 A U 33 1_555 A G 60 1_555 1.828 -0.087 -0.155 2.832 -17.408 5.219 31 A_U33:G60_A A 33 ? A 60 ? 28 1 1 A G 34 1_555 A C 59 1_555 0.328 -0.097 -0.060 -13.385 -13.506 0.934 32 A_G34:C59_A A 34 ? A 59 ? 19 1 1 A U 35 1_555 A A 58 1_555 0.115 -0.064 0.033 5.656 -9.431 3.016 33 A_U35:A58_A A 35 ? A 58 ? 20 1 1 A C 36 1_555 A G 57 1_555 -0.632 0.059 -0.334 11.294 -11.622 4.599 34 A_C36:G57_A A 36 ? A 57 ? 19 1 1 A C 37 1_555 A G 56 1_555 -0.189 0.247 -0.209 0.225 -6.628 7.704 35 A_C37:G56_A A 37 ? A 56 ? 19 1 1 A C 38 1_555 A G 55 1_555 0.013 -0.022 -0.055 -4.310 0.993 1.753 36 A_C38:G55_A A 38 ? A 55 ? 19 1 1 A C 41 1_555 A G 54 1_555 -0.408 -0.046 0.708 -17.317 4.740 -1.252 37 A_C41:G54_A A 41 ? A 54 ? 19 1 1 A U 52 1_555 A U 40 1_555 -2.193 -2.984 0.046 -13.259 -13.612 -178.603 38 A_U52:U40_A A 52 ? A 40 ? 13 2 1 A A 42 1_555 A A 50 1_555 -4.173 1.077 0.050 24.901 13.790 -106.220 39 A_A42:A50_A A 42 ? A 50 ? 5 4 1 A C 95 1_555 A G 49 1_555 0.153 -0.109 -0.234 20.387 -22.857 0.302 40 A_C95:G49_A A 95 ? A 49 ? 19 1 1 A C 96 1_555 A G 48 1_555 -0.005 0.040 -0.267 11.643 -14.674 5.382 41 A_C96:G48_A A 96 ? A 48 ? 19 1 1 A U 97 1_555 A A 47 1_555 -0.017 -0.045 -0.255 13.339 -7.777 4.425 42 A_U97:A47_A A 97 ? A 47 ? 20 1 1 A C 98 1_555 A G 46 1_555 0.203 -0.227 -0.270 6.904 -3.049 -1.093 43 A_C98:G46_A A 98 ? A 46 ? 19 1 1 A C 99 1_555 A G 45 1_555 0.391 -0.235 -0.217 4.492 -1.018 -1.403 44 A_C99:G45_A A 99 ? A 45 ? 19 1 1 A C 100 1_555 A G 44 1_555 0.576 -0.180 0.066 -0.278 -12.008 2.731 45 A_C100:G44_A A 100 ? A 44 ? 19 1 1 A G 101 1_555 A U 93 1_555 -2.420 -0.601 -0.083 3.335 -6.787 -3.676 46 A_G101:U93_A A 101 ? A 93 ? 28 ? 1 A C 102 1_555 A G 92 1_555 0.193 -0.329 -0.361 15.236 -20.167 -3.736 47 A_C102:G92_A A 102 ? A 92 ? 19 1 1 A U 103 1_555 A A 91 1_555 -0.025 -0.174 -0.042 6.025 -12.132 6.173 48 A_U103:A91_A A 103 ? A 91 ? 20 1 1 A C 104 1_555 A G 90 1_555 0.212 -0.257 -0.362 7.154 -12.797 -0.357 49 A_C104:G90_A A 104 ? A 90 ? 19 1 1 A U 105 1_555 A A 89 1_555 -0.028 0.019 0.127 2.055 -8.746 8.445 50 A_U105:A89_A A 105 ? A 89 ? 20 1 1 A G 106 1_555 A C 88 1_555 -0.479 -0.277 0.109 0.436 -11.339 -2.724 51 A_G106:C88_A A 106 ? A 88 ? 19 1 1 A C 107 1_555 A G 87 1_555 0.194 -0.179 -0.127 1.178 -14.266 2.537 52 A_C107:G87_A A 107 ? A 87 ? 19 1 1 A A 108 1_555 A U 86 1_555 0.008 -0.184 0.005 -5.581 -18.445 3.166 53 A_A108:U86_A A 108 ? A 86 ? 20 1 1 A U 109 1_555 A G 85 1_555 2.286 -0.612 0.303 1.081 -12.403 0.476 54 A_U109:G85_A A 109 ? A 85 ? 28 1 1 A C 111 1_555 A G 84 1_555 0.122 -0.059 -0.085 -4.133 -4.916 1.552 55 A_C111:G84_A A 111 ? A 84 ? 19 1 1 A C 112 1_555 A G 83 1_555 0.279 -0.212 0.159 -7.329 -3.367 3.541 56 A_C112:G83_A A 112 ? A 83 ? 19 1 1 A U 113 1_555 A A 82 1_555 0.150 -0.206 -0.425 11.336 1.052 3.044 57 A_U113:A82_A A 113 ? A 82 ? 20 1 1 A G 80 1_555 A A 81 1_555 6.525 3.045 -1.013 -25.703 49.232 14.234 58 A_G80:A81_A A 80 ? A 81 ? ? ? 1 A A 129 1_555 A G 125 1_555 -7.130 -4.349 0.535 -6.041 5.141 -10.477 59 A_A129:G125_A A 129 ? A 125 ? ? ? 1 A C 130 1_555 A G 124 1_555 0.048 -0.094 0.009 13.015 -6.024 1.908 60 A_C130:G124_A A 130 ? A 124 ? 19 1 1 A C 131 1_555 A G 123 1_555 0.305 -0.237 -0.496 11.317 -9.350 1.114 61 A_C131:G123_A A 131 ? A 123 ? 19 1 1 A C 132 1_555 A G 122 1_555 0.014 -0.144 -0.121 0.753 -13.116 3.087 62 A_C132:G122_A A 132 ? A 122 ? 19 1 1 A A 133 1_555 A U 121 1_555 0.007 -0.118 -0.018 -3.268 -17.140 2.478 63 A_A133:U121_A A 133 ? A 121 ? 20 1 1 A U 134 1_555 A A 120 1_555 0.299 -0.213 0.118 1.728 -13.572 2.773 64 A_U134:A120_A A 134 ? A 120 ? 20 1 1 A A 135 1_555 A U 119 1_555 0.264 -0.190 0.092 0.492 -18.048 1.149 65 A_A135:U119_A A 135 ? A 119 ? 20 1 1 A C 136 1_555 A G 118 1_555 0.522 -0.212 0.157 5.151 -23.760 3.073 66 A_C136:G118_A A 136 ? A 118 ? 19 1 1 A C 137 1_555 A G 117 1_555 0.248 -0.124 0.336 -0.814 -13.277 0.984 67 A_C137:G117_A A 137 ? A 117 ? 19 1 1 A A 138 1_555 A G 116 1_555 0.154 1.504 -0.240 3.850 -6.770 -16.298 68 A_A138:G116_A A 138 ? A 116 ? 8 ? 1 A C 139 1_555 A G 115 1_555 0.443 -0.340 -0.063 11.192 -17.718 -2.263 69 A_C139:G115_A A 139 ? A 115 ? 19 1 1 A U 140 1_555 A G 114 1_555 2.203 -0.658 0.167 -0.050 -9.708 -1.398 70 A_U140:G114_A A 140 ? A 114 ? 28 1 1 A G 141 1_555 A A 162 1_555 0.149 1.555 -0.326 -7.353 -27.887 -3.694 71 A_G141:A162_A A 141 ? A 162 ? 8 1 1 A U 142 1_555 A G 161 1_555 2.373 -0.653 0.351 0.747 -17.949 -4.144 72 A_U142:G161_A A 142 ? A 161 ? 28 ? 1 A C 143 1_555 A G 160 1_555 0.152 -0.180 0.069 17.245 -21.717 -1.366 73 A_C143:G160_A A 143 ? A 160 ? 19 1 1 A A 144 1_555 A U 159 1_555 0.228 -0.335 0.181 5.247 -20.831 2.340 74 A_A144:U159_A A 144 ? A 159 ? 20 1 1 A C 145 1_555 A G 158 1_555 0.456 -0.217 -0.117 6.325 -17.739 3.136 75 A_C145:G158_A A 145 ? A 158 ? 19 1 1 A G 146 1_555 A C 157 1_555 -0.086 -0.272 0.131 1.823 -8.451 -3.018 76 A_G146:C157_A A 146 ? A 157 ? 19 1 1 A G 147 1_555 A C 156 1_555 -0.082 -0.004 0.140 -3.291 -10.536 4.705 77 A_G147:C156_A A 147 ? A 156 ? 19 1 1 A A 148 1_555 A U 155 1_555 0.070 0.118 -0.065 -1.761 -4.914 0.122 78 A_A148:U155_A A 148 ? A 155 ? 20 1 1 A G 149 1_555 A C 154 1_555 0.146 -0.065 -0.174 -2.162 -7.623 2.975 79 A_G149:C154_A A 149 ? A 154 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A CCC 174 1_555 A G 2 1_555 A U 173 1_555 -0.032 -1.809 2.998 -4.659 7.597 26.231 -5.331 -0.884 2.361 16.158 9.909 27.678 1 AA_G1G2:U173CCC174_AA A 1 ? A 174 ? A 2 ? A 173 ? 1 A G 2 1_555 A U 173 1_555 A C 3 1_555 A G 172 1_555 -0.268 -1.396 3.315 -2.701 3.832 42.053 -2.325 0.095 3.192 5.321 3.750 42.301 2 AA_G2C3:G172U173_AA A 2 ? A 173 ? A 3 ? A 172 ? 1 A C 3 1_555 A G 172 1_555 A C 4 1_555 A G 171 1_555 -0.136 -1.607 3.110 1.781 7.035 33.346 -3.746 0.487 2.714 12.082 -3.060 34.105 3 AA_C3C4:G171G172_AA A 3 ? A 172 ? A 4 ? A 171 ? 1 A C 4 1_555 A G 171 1_555 A G 5 1_555 A C 170 1_555 0.622 -1.675 3.139 0.896 9.009 31.951 -4.287 -0.955 2.600 15.969 -1.589 33.177 4 AA_C4G5:C170G171_AA A 4 ? A 171 ? A 5 ? A 170 ? 1 A G 5 1_555 A C 170 1_555 A A 6 1_555 A U 169 1_555 -1.004 -1.933 3.094 -2.181 4.837 24.960 -5.626 1.710 2.752 11.032 4.974 25.509 5 AA_G5A6:U169C170_AA A 5 ? A 170 ? A 6 ? A 169 ? 1 A A 6 1_555 A U 169 1_555 A C 7 1_555 A G 168 1_555 0.554 -1.527 3.031 0.501 3.544 34.994 -3.005 -0.849 2.875 5.875 -0.831 35.171 6 AA_A6C7:G168U169_AA A 6 ? A 169 ? A 7 ? A 168 ? 1 A C 7 1_555 A G 168 1_555 A G 8 1_555 A C 167 1_555 -0.776 -2.045 3.554 -1.719 15.005 29.984 -5.905 1.076 2.334 26.958 3.088 33.495 7 AA_C7G8:C167G168_AA A 7 ? A 168 ? A 8 ? A 167 ? 1 A G 8 1_555 A C 167 1_555 A G 9 1_555 A C 166 1_555 0.330 -2.122 3.454 3.519 6.674 30.118 -5.242 0.055 2.946 12.596 -6.641 31.028 8 AA_G8G9:C166C167_AA A 8 ? A 167 ? A 9 ? A 166 ? 1 A G 9 1_555 A C 166 1_555 A A 10 1_555 A G 165 1_555 -1.112 -1.576 3.050 1.299 2.234 36.558 -2.786 1.931 2.912 3.556 -2.067 36.646 9 AA_G9A10:G165C166_AA A 9 ? A 166 ? A 10 ? A 165 ? 1 A A 10 1_555 A G 165 1_555 A G 11 1_555 A G 163 1_555 1.915 2.921 1.112 73.893 -154.851 -94.241 -0.903 1.225 2.047 78.439 37.430 -174.272 10 AA_A10G11:G163G165_AA A 10 ? A 165 ? A 11 ? A 163 ? 1 A G 11 1_555 A G 163 1_555 A G 12 1_555 A C 79 1_555 -2.820 5.911 0.914 -13.512 -162.858 98.374 2.587 1.448 -2.981 -83.420 6.921 169.184 11 AA_G11G12:C79G163_AA A 11 ? A 163 ? A 12 ? A 79 ? 1 A G 12 1_555 A C 79 1_555 A G 14 1_555 A C 78 1_555 1.285 -2.434 3.810 -4.208 5.058 27.541 -6.233 -3.671 3.095 10.437 8.682 28.301 12 AA_G12G14:C78C79_AA A 12 ? A 79 ? A 14 ? A 78 ? 1 A G 14 1_555 A C 78 1_555 A C 15 1_555 A G 77 1_555 -1.208 -2.371 3.034 -2.010 -0.273 25.765 -5.230 2.173 3.142 -0.611 4.498 25.843 13 AA_G14C15:G77C78_AA A 14 ? A 78 ? A 15 ? A 77 ? 1 A C 15 1_555 A G 77 1_555 A G 16 1_555 A C 76 1_555 -0.141 -1.550 3.517 -2.010 11.375 28.827 -5.071 -0.119 2.727 21.776 3.848 31.010 14 AA_C15G16:C76G77_AA A 15 ? A 77 ? A 16 ? A 76 ? 1 A G 16 1_555 A C 76 1_555 A C 17 1_555 A G 75 1_555 -0.550 -1.626 3.105 -3.147 1.859 37.496 -2.746 0.466 3.059 2.884 4.882 37.668 15 AA_G16C17:G75C76_AA A 16 ? A 76 ? A 17 ? A 75 ? 1 A C 17 1_555 A G 75 1_555 A C 18 1_555 A G 74 1_555 0.467 -1.756 3.441 -0.712 4.928 33.043 -3.880 -0.931 3.143 8.604 1.243 33.405 16 AA_C17C18:G74G75_AA A 17 ? A 75 ? A 18 ? A 74 ? 1 A C 18 1_555 A G 74 1_555 A C 19 1_555 A G 73 1_555 -0.376 -1.705 3.193 1.667 5.454 30.162 -4.217 1.014 2.824 10.364 -3.168 30.684 17 AA_C18C19:G73G74_AA A 18 ? A 74 ? A 19 ? A 73 ? 1 A C 19 1_555 A G 73 1_555 A G 20 1_555 A A 72 1_555 -1.500 0.962 4.418 14.982 24.597 49.321 -0.885 2.737 3.905 26.994 -16.442 56.657 18 AA_C19G20:A72G73_AA A 19 ? A 73 ? A 20 ? A 72 ? 1 A G 20 1_555 A A 72 1_555 A A 21 1_555 A G 71 1_555 -0.356 0.812 3.268 -12.732 5.763 -19.433 -3.725 -4.757 2.282 -14.840 -32.787 -23.897 19 AA_G20A21:G71A72_AA A 20 ? A 72 ? A 21 ? A 71 ? 1 A A 21 1_555 A G 71 1_555 A G 22 1_555 A C 70 1_555 1.250 -0.780 3.553 -1.178 4.735 59.668 -1.035 -1.316 3.465 4.750 1.182 59.849 20 AA_A21G22:C70G71_AA A 21 ? A 71 ? A 22 ? A 70 ? 1 A G 22 1_555 A C 70 1_555 A A 23 1_555 A G 69 1_555 -1.006 -2.197 3.385 5.411 5.569 31.661 -4.843 2.693 2.763 10.019 -9.736 32.576 21 AA_G22A23:G69C70_AA A 22 ? A 70 ? A 23 ? A 69 ? 1 A A 23 1_555 A G 69 1_555 A A 126 1_555 A G 68 1_555 -0.437 2.780 4.902 129.336 36.892 -144.694 -1.588 0.442 4.608 -18.712 65.600 -166.529 22 AA_A23A126:G68G69_AA A 23 ? A 69 ? A 126 ? A 68 ? 1 A A 126 1_555 A G 68 1_555 A G 25 1_555 A A 67 1_555 -4.836 -2.355 -3.026 126.262 -82.764 -151.321 1.002 -2.693 -2.276 41.620 63.494 -172.882 23 AA_A126G25:A67G68_AA A 126 ? A 68 ? A 25 ? A 67 ? 1 A G 25 1_555 A A 67 1_555 A A 26 1_555 A A 66 1_555 -2.571 1.884 1.787 89.961 152.742 37.445 0.120 1.770 0.876 77.171 -45.452 177.410 24 AA_G25A26:A66A67_AA A 25 ? A 67 ? A 26 ? A 66 ? 1 A A 26 1_555 A A 66 1_555 A U 28 1_555 A A 65 1_555 1.795 -2.933 0.738 123.566 125.003 13.185 -1.469 -0.897 -0.733 63.834 -63.100 175.796 25 AA_A26U28:A65A66_AA A 26 ? A 66 ? A 28 ? A 65 ? 1 A U 28 1_555 A A 65 1_555 A A 29 1_555 A G 64 1_555 5.028 -0.670 3.519 0.643 0.403 -13.142 2.471 22.653 3.289 -1.758 2.805 -13.164 26 AA_U28A29:G64A65_AA A 28 ? A 65 ? A 29 ? A 64 ? 1 A A 29 1_555 A G 64 1_555 A G 30 1_555 A U 63 1_555 0.191 -0.647 3.316 -5.565 3.093 54.565 -0.888 -0.541 3.246 3.361 6.047 54.907 27 AA_A29G30:U63G64_AA A 29 ? A 64 ? A 30 ? A 63 ? 1 A G 30 1_555 A U 63 1_555 A G 31 1_555 A C 62 1_555 -0.839 -1.444 3.437 -4.633 13.604 36.649 -3.758 0.699 2.828 20.685 7.045 39.276 28 AA_G30G31:C62U63_AA A 30 ? A 63 ? A 31 ? A 62 ? 1 A G 31 1_555 A C 62 1_555 A C 32 1_555 A G 61 1_555 -0.350 -1.384 3.235 -2.233 5.029 36.505 -2.842 0.262 3.040 7.971 3.540 36.904 29 AA_G31C32:G61C62_AA A 31 ? A 62 ? A 32 ? A 61 ? 1 A C 32 1_555 A G 61 1_555 A U 33 1_555 A G 60 1_555 1.393 -1.842 3.305 5.514 7.191 35.962 -3.854 -1.460 3.066 11.424 -8.760 37.049 30 AA_C32U33:G60G61_AA A 32 ? A 61 ? A 33 ? A 60 ? 1 A U 33 1_555 A G 60 1_555 A G 34 1_555 A C 59 1_555 -1.280 -2.106 3.430 0.005 19.222 24.735 -6.972 2.378 1.453 38.330 -0.010 31.233 31 AA_U33G34:C59G60_AA A 33 ? A 60 ? A 34 ? A 59 ? 1 A G 34 1_555 A C 59 1_555 A U 35 1_555 A A 58 1_555 0.018 -1.023 2.825 -0.465 4.424 27.657 -2.994 -0.130 2.632 9.179 0.966 28.006 32 AA_G34U35:A58C59_AA A 34 ? A 59 ? A 35 ? A 58 ? 1 A U 35 1_555 A A 58 1_555 A C 36 1_555 A G 57 1_555 0.833 -1.376 2.987 2.958 6.408 29.917 -3.707 -1.061 2.709 12.199 -5.632 30.720 33 AA_U35C36:G57A58_AA A 35 ? A 58 ? A 36 ? A 57 ? 1 A C 36 1_555 A G 57 1_555 A C 37 1_555 A G 56 1_555 0.534 -1.972 3.593 -0.312 3.348 31.162 -4.323 -1.052 3.363 6.209 0.579 31.339 34 AA_C36C37:G56G57_AA A 36 ? A 57 ? A 37 ? A 56 ? 1 A C 37 1_555 A G 56 1_555 A C 38 1_555 A G 55 1_555 -0.073 -1.844 3.405 1.119 3.996 31.420 -4.118 0.340 3.148 7.338 -2.055 31.686 35 AA_C37C38:G55G56_AA A 37 ? A 56 ? A 38 ? A 55 ? 1 A C 38 1_555 A G 55 1_555 A C 41 1_555 A G 54 1_555 -1.566 -2.405 3.611 -4.574 -0.850 37.009 -3.633 1.759 3.823 -1.332 7.172 37.290 36 AA_C38C41:G54G55_AA A 38 ? A 55 ? A 41 ? A 54 ? 1 A C 41 1_555 A G 54 1_555 A U 52 1_555 A U 40 1_555 -0.560 -1.090 2.762 -2.061 8.375 -95.860 0.609 -0.406 2.818 -5.632 -1.386 -96.153 37 AA_C41U52:U40G54_AA A 41 ? A 54 ? A 52 ? A 40 ? 1 A A 42 1_555 A A 50 1_555 A C 95 1_555 A G 49 1_555 3.214 -2.173 3.074 -4.409 4.415 77.774 -1.838 -2.665 2.811 3.511 3.507 77.985 38 AA_A42C95:G49A50_AA A 42 ? A 50 ? A 95 ? A 49 ? 1 A C 95 1_555 A G 49 1_555 A C 96 1_555 A G 48 1_555 -0.468 -2.141 3.417 -3.844 12.978 28.652 -6.137 0.205 2.299 24.566 7.277 31.628 39 AA_C95C96:G48G49_AA A 95 ? A 49 ? A 96 ? A 48 ? 1 A C 96 1_555 A G 48 1_555 A U 97 1_555 A A 47 1_555 -0.447 -1.404 3.208 -4.610 10.614 31.438 -4.060 0.073 2.646 18.810 8.170 33.449 40 AA_C96U97:A47G48_AA A 96 ? A 48 ? A 97 ? A 47 ? 1 A U 97 1_555 A A 47 1_555 A C 98 1_555 A G 46 1_555 -0.221 -1.856 3.435 -1.310 9.477 33.927 -4.447 0.175 2.836 15.854 2.191 35.212 41 AA_U97C98:G46A47_AA A 97 ? A 47 ? A 98 ? A 46 ? 1 A C 98 1_555 A G 46 1_555 A C 99 1_555 A G 45 1_555 -0.505 -2.071 3.279 -0.661 9.552 29.317 -5.589 0.834 2.506 18.268 1.265 30.808 42 AA_C98C99:G45G46_AA A 98 ? A 46 ? A 99 ? A 45 ? 1 A C 99 1_555 A G 45 1_555 A C 100 1_555 A G 44 1_555 0.850 -1.920 3.250 1.264 7.111 34.735 -4.135 -1.221 2.842 11.754 -2.089 35.455 43 AA_C99C100:G44G45_AA A 99 ? A 45 ? A 100 ? A 44 ? 1 A C 100 1_555 A G 44 1_555 A G 101 1_555 A U 93 1_555 2.360 -0.983 3.157 -1.624 4.977 44.397 -1.719 -3.243 2.952 6.559 2.140 44.689 44 AA_C100G101:U93G44_AA A 100 ? A 44 ? A 101 ? A 93 ? 1 A G 101 1_555 A U 93 1_555 A C 102 1_555 A G 92 1_555 -0.169 -1.039 3.015 -1.521 8.399 40.174 -2.298 0.093 2.756 12.062 2.184 41.034 45 AA_G101C102:G92U93_AA A 101 ? A 93 ? A 102 ? A 92 ? 1 A C 102 1_555 A G 92 1_555 A U 103 1_555 A A 91 1_555 0.264 -1.694 3.490 -3.249 12.217 32.598 -4.631 -0.921 2.666 20.815 5.535 34.901 46 AA_C102U103:A91G92_AA A 102 ? A 92 ? A 103 ? A 91 ? 1 A U 103 1_555 A A 91 1_555 A C 104 1_555 A G 90 1_555 -0.406 -1.465 3.167 0.669 9.555 31.622 -4.044 0.817 2.616 17.050 -1.194 33.006 47 AA_U103C104:G90A91_AA A 103 ? A 91 ? A 104 ? A 90 ? 1 A C 104 1_555 A G 90 1_555 A U 105 1_555 A A 89 1_555 0.625 -1.815 3.342 -3.141 8.901 29.670 -4.976 -1.727 2.622 16.853 5.947 31.103 48 AA_C104U105:A89G90_AA A 104 ? A 90 ? A 105 ? A 89 ? 1 A U 105 1_555 A A 89 1_555 A G 106 1_555 A C 88 1_555 -0.951 -1.744 3.228 -0.878 8.792 29.271 -4.909 1.645 2.632 16.919 1.690 30.548 49 AA_U105G106:C88A89_AA A 105 ? A 89 ? A 106 ? A 88 ? 1 A G 106 1_555 A C 88 1_555 A C 107 1_555 A G 87 1_555 0.506 -1.665 3.229 3.384 7.222 34.033 -3.805 -0.359 2.863 12.133 -5.686 34.928 50 AA_G106C107:G87C88_AA A 106 ? A 88 ? A 107 ? A 87 ? 1 A C 107 1_555 A G 87 1_555 A A 108 1_555 A U 86 1_555 0.213 -1.509 3.349 2.589 13.221 31.764 -4.485 0.020 2.547 22.909 -4.487 34.435 51 AA_C107A108:U86G87_AA A 107 ? A 87 ? A 108 ? A 86 ? 1 A A 108 1_555 A U 86 1_555 A U 109 1_555 A G 85 1_555 0.037 -0.920 3.040 0.767 8.734 40.517 -2.143 0.022 2.792 12.437 -1.092 41.416 52 AA_A108U109:G85U86_AA A 108 ? A 86 ? A 109 ? A 85 ? 1 A U 109 1_555 A G 85 1_555 A C 111 1_555 A G 84 1_555 -2.017 -1.307 3.010 1.196 8.681 44.231 -2.390 2.727 2.668 11.396 -1.571 45.048 53 AA_U109C111:G84G85_AA A 109 ? A 85 ? A 111 ? A 84 ? 1 A C 111 1_555 A G 84 1_555 A C 112 1_555 A G 83 1_555 -0.396 -2.094 3.328 -1.248 7.287 29.832 -5.306 0.516 2.765 13.888 2.378 30.714 54 AA_C111C112:G83G84_AA A 111 ? A 84 ? A 112 ? A 83 ? 1 A C 112 1_555 A G 83 1_555 A U 113 1_555 A A 82 1_555 -0.027 -1.617 2.822 3.462 4.994 26.413 -4.486 0.774 2.457 10.749 -7.452 27.091 55 AA_C112U113:A82G83_AA A 112 ? A 83 ? A 113 ? A 82 ? 1 A U 113 1_555 A A 82 1_555 A G 80 1_555 A A 81 1_555 -4.912 1.036 3.648 120.344 90.365 -137.625 -0.970 -1.868 4.577 -45.757 60.938 -169.438 56 AA_U113G80:A81A82_AA A 113 ? A 82 ? A 80 ? A 81 ? 1 A A 129 1_555 A G 125 1_555 A C 130 1_555 A G 124 1_555 0.440 -0.899 2.850 -2.812 9.068 64.729 -1.152 -0.506 2.698 8.422 2.612 65.346 57 AA_A129C130:G124G125_AA A 129 ? A 125 ? A 130 ? A 124 ? 1 A C 130 1_555 A G 124 1_555 A C 131 1_555 A G 123 1_555 -0.106 -2.040 3.279 2.133 6.102 30.820 -4.836 0.570 2.820 11.325 -3.958 31.475 58 AA_C130C131:G123G124_AA A 130 ? A 124 ? A 131 ? A 123 ? 1 A C 131 1_555 A G 123 1_555 A C 132 1_555 A G 122 1_555 0.461 -2.079 3.444 0.609 10.270 29.931 -5.629 -0.739 2.614 19.186 -1.137 31.611 59 AA_C131C132:G122G123_AA A 131 ? A 123 ? A 132 ? A 122 ? 1 A C 132 1_555 A G 122 1_555 A A 133 1_555 A U 121 1_555 -0.452 -1.486 3.438 0.554 11.959 29.461 -4.837 0.925 2.641 22.387 -1.037 31.751 60 AA_C132A133:U121G122_AA A 132 ? A 122 ? A 133 ? A 121 ? 1 A A 133 1_555 A U 121 1_555 A U 134 1_555 A A 120 1_555 -0.130 -1.071 3.150 -2.196 8.465 31.859 -3.212 -0.115 2.785 15.069 3.910 33.008 61 AA_A133U134:A120U121_AA A 133 ? A 121 ? A 134 ? A 120 ? 1 A U 134 1_555 A A 120 1_555 A A 135 1_555 A U 119 1_555 -0.342 -1.266 3.156 -0.575 13.417 32.962 -3.831 0.486 2.475 22.518 0.965 35.522 62 AA_U134A135:U119A120_AA A 134 ? A 120 ? A 135 ? A 119 ? 1 A A 135 1_555 A U 119 1_555 A C 136 1_555 A G 118 1_555 -0.240 -1.108 3.072 -0.793 7.345 32.173 -3.078 0.302 2.763 13.039 1.407 32.988 63 AA_A135C136:G118U119_AA A 135 ? A 119 ? A 136 ? A 118 ? 1 A C 136 1_555 A G 118 1_555 A C 137 1_555 A G 117 1_555 0.382 -1.389 3.326 0.772 6.561 34.492 -3.265 -0.520 3.026 10.941 -1.287 35.100 64 AA_C136C137:G117G118_AA A 136 ? A 118 ? A 137 ? A 117 ? 1 A C 137 1_555 A G 117 1_555 A A 138 1_555 A G 116 1_555 -0.752 -1.509 3.171 5.328 8.725 23.494 -5.552 3.008 2.253 20.244 -12.362 25.593 65 AA_C137A138:G116G117_AA A 137 ? A 117 ? A 138 ? A 116 ? 1 A A 138 1_555 A G 116 1_555 A C 139 1_555 A G 115 1_555 0.943 -1.616 3.015 -0.909 0.702 32.391 -3.008 -1.836 2.953 1.258 1.628 32.411 66 AA_A138C139:G115G116_AA A 138 ? A 116 ? A 139 ? A 115 ? 1 A C 139 1_555 A G 115 1_555 A U 140 1_555 A G 114 1_555 0.437 -1.591 3.647 -0.619 5.383 41.550 -2.835 -0.681 3.417 7.549 0.868 41.886 67 AA_C139U140:G114G115_AA A 139 ? A 115 ? A 140 ? A 114 ? 1 A U 140 1_555 A G 114 1_555 A G 141 1_555 A A 162 1_555 -0.278 -2.731 3.081 6.604 22.208 24.402 -7.021 1.162 0.422 42.296 -12.577 33.528 68 AA_U140G141:A162G114_AA A 140 ? A 114 ? A 141 ? A 162 ? 1 A G 141 1_555 A A 162 1_555 A U 142 1_555 A G 161 1_555 0.036 -0.663 3.229 -7.072 9.973 38.719 -2.031 -0.814 2.928 14.605 10.356 40.533 69 AA_G141U142:G161A162_AA A 141 ? A 162 ? A 142 ? A 161 ? 1 A U 142 1_555 A G 161 1_555 A C 143 1_555 A G 160 1_555 0.476 -1.034 2.588 6.254 5.613 25.033 -3.427 0.252 2.352 12.508 -13.937 26.384 70 AA_U142C143:G160G161_AA A 142 ? A 161 ? A 143 ? A 160 ? 1 A C 143 1_555 A G 160 1_555 A A 144 1_555 A U 159 1_555 -0.319 -1.419 3.434 -3.417 14.261 33.512 -4.186 0.049 2.652 23.391 5.605 36.496 71 AA_C143A144:U159G160_AA A 143 ? A 160 ? A 144 ? A 159 ? 1 A A 144 1_555 A U 159 1_555 A C 145 1_555 A G 158 1_555 -0.091 -1.434 3.235 0.250 5.071 33.878 -3.200 0.192 2.994 8.642 -0.427 34.246 72 AA_A144C145:G158U159_AA A 144 ? A 159 ? A 145 ? A 158 ? 1 A C 145 1_555 A G 158 1_555 A G 146 1_555 A C 157 1_555 -0.576 -1.904 3.106 -3.632 16.035 27.446 -5.827 0.512 1.806 30.566 6.923 31.912 73 AA_C145G146:C157G158_AA A 145 ? A 158 ? A 146 ? A 157 ? 1 A G 146 1_555 A C 157 1_555 A G 147 1_555 A C 156 1_555 1.063 -2.141 3.303 1.617 7.837 30.439 -5.327 -1.677 2.732 14.612 -3.015 31.449 74 AA_G146G147:C156C157_AA A 146 ? A 157 ? A 147 ? A 156 ? 1 A G 147 1_555 A C 156 1_555 A A 148 1_555 A U 155 1_555 -1.053 -1.604 3.198 -0.521 6.193 33.179 -3.705 1.735 2.876 10.728 0.903 33.740 75 AA_G147A148:U155C156_AA A 147 ? A 156 ? A 148 ? A 155 ? 1 A A 148 1_555 A U 155 1_555 A G 149 1_555 A C 154 1_555 0.336 -1.756 3.264 0.584 6.284 29.787 -4.533 -0.530 2.849 12.054 -1.120 30.434 76 AA_A148G149:C154U155_AA A 148 ? A 155 ? A 149 ? A 154 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 LYSINE LYS 4 'THALLIUM (I) ION' TL 5 'ISOPROPYL ALCOHOL' IPA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3DIL _pdbx_initial_refinement_model.details 'pdb entry 3DIL' #