data_3DJX # _entry.id 3DJX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DJX pdb_00003djx 10.2210/pdb3djx/pdb RCSB RCSB048130 ? ? WWPDB D_1000048130 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3DJO ;BS-RNase uridine 2' phosphate complex ; unspecified PDB 3DJP ;BS-RNase uridine 3' phosphate complex ; unspecified PDB 3DJQ ;BS-RNase Uridine 5' diphosphate complex ; unspecified PDB 3DJV ;BS-RNase cytidine 3' phosphate complex ; unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DJX _pdbx_database_status.recvd_initial_deposition_date 2008-06-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dossi, K.' 1 'Leonidas, D.D.' 2 'Zographos, S.E.' 3 'Oikonomakos, N.G.' 4 # _citation.id primary _citation.title 'Mapping the ribonucleolytic active site of bovine seminal ribonuclease. The binding of pyrimidinyl phosphonucleotide inhibitors' _citation.journal_abbrev Eur.J.Med.Chem. _citation.journal_volume 44 _citation.page_first 4496 _citation.page_last 4508 _citation.year 2009 _citation.journal_id_ASTM EJMCA5 _citation.country FR _citation.journal_id_ISSN 0223-5234 _citation.journal_id_CSD 0493 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19643512 _citation.pdbx_database_id_DOI 10.1016/j.ejmech.2009.06.039 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dossi, K.' 1 ? primary 'Tsirkone, V.G.' 2 ? primary 'Hayes, J.M.' 3 ? primary 'Matousek, J.' 4 ? primary 'Pouckova, P.' 5 ? primary 'Soucek, J.' 6 ? primary 'Zadinova, M.' 7 ? primary 'Zographos, S.E.' 8 ? primary 'Leonidas, D.D.' 9 ? # _cell.entry_id 3DJX _cell.length_a 48.585 _cell.length_b 59.016 _cell.length_c 82.247 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DJX _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Seminal ribonuclease' 13632.640 2 3.1.27.5 ? ? ? 2 non-polymer syn "CYTIDINE-5'-MONOPHOSPHATE" 323.197 2 ? ? ? ? 3 water nat water 18.015 307 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Seminal RNase, S-RNase, Ribonuclease BS-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMR ITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV ; _entity_poly.pdbx_seq_one_letter_code_can ;KESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMR ITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 GLU n 1 3 SER n 1 4 ALA n 1 5 ALA n 1 6 ALA n 1 7 LYS n 1 8 PHE n 1 9 GLU n 1 10 ARG n 1 11 GLN n 1 12 HIS n 1 13 MET n 1 14 ASP n 1 15 SER n 1 16 GLY n 1 17 ASN n 1 18 SER n 1 19 PRO n 1 20 SER n 1 21 SER n 1 22 SER n 1 23 SER n 1 24 ASN n 1 25 TYR n 1 26 CYS n 1 27 ASN n 1 28 LEU n 1 29 MET n 1 30 MET n 1 31 CYS n 1 32 CYS n 1 33 ARG n 1 34 LYS n 1 35 MET n 1 36 THR n 1 37 GLN n 1 38 GLY n 1 39 LYS n 1 40 CYS n 1 41 LYS n 1 42 PRO n 1 43 VAL n 1 44 ASN n 1 45 THR n 1 46 PHE n 1 47 VAL n 1 48 HIS n 1 49 GLU n 1 50 SER n 1 51 LEU n 1 52 ALA n 1 53 ASP n 1 54 VAL n 1 55 LYS n 1 56 ALA n 1 57 VAL n 1 58 CYS n 1 59 SER n 1 60 GLN n 1 61 LYS n 1 62 LYS n 1 63 VAL n 1 64 THR n 1 65 CYS n 1 66 LYS n 1 67 ASN n 1 68 GLY n 1 69 GLN n 1 70 THR n 1 71 ASN n 1 72 CYS n 1 73 TYR n 1 74 GLN n 1 75 SER n 1 76 LYS n 1 77 SER n 1 78 THR n 1 79 MET n 1 80 ARG n 1 81 ILE n 1 82 THR n 1 83 ASP n 1 84 CYS n 1 85 ARG n 1 86 GLU n 1 87 THR n 1 88 GLY n 1 89 SER n 1 90 SER n 1 91 LYS n 1 92 TYR n 1 93 PRO n 1 94 ASN n 1 95 CYS n 1 96 ALA n 1 97 TYR n 1 98 LYS n 1 99 THR n 1 100 THR n 1 101 GLN n 1 102 VAL n 1 103 GLU n 1 104 LYS n 1 105 HIS n 1 106 ILE n 1 107 ILE n 1 108 VAL n 1 109 ALA n 1 110 CYS n 1 111 GLY n 1 112 GLY n 1 113 LYS n 1 114 PRO n 1 115 SER n 1 116 VAL n 1 117 PRO n 1 118 VAL n 1 119 HIS n 1 120 PHE n 1 121 ASP n 1 122 ALA n 1 123 SER n 1 124 VAL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name Bovine _entity_src_nat.pdbx_organism_scientific 'Bos taurus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9913 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNS_BOVIN _struct_ref.pdbx_db_accession P00669 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMR ITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV ; _struct_ref.pdbx_align_begin 27 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DJX A 1 ? 124 ? P00669 27 ? 150 ? 1 124 2 1 3DJX B 1 ? 124 ? P00669 27 ? 150 ? 1 124 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C5P non-polymer . "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3DJX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 43.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '30% PEG4000, 0.1M sodium acetate, 0.1M Tris/HCl, pH8.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2007-02-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Crystal _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8088 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X13' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X13 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8088 # _reflns.entry_id 3DJX _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.69 _reflns.d_resolution_low 27.775 _reflns.number_all 26589 _reflns.number_obs 26554 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.059 _reflns.pdbx_netI_over_sigmaI 14.1 _reflns.B_iso_Wilson_estimate 16.968 _reflns.pdbx_redundancy 3.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.73 _reflns_shell.percent_possible_all 98.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.445 _reflns_shell.meanI_over_sigI_obs 3.4 _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4382 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DJX _refine.ls_number_reflns_obs 25228 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.77 _refine.ls_d_res_high 1.69 _refine.ls_percent_reflns_obs 97.45 _refine.ls_R_factor_obs 0.17036 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16862 _refine.ls_R_factor_R_free 0.20428 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1326 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 14.364 _refine.aniso_B[1][1] -0.07 _refine.aniso_B[2][2] -0.10 _refine.aniso_B[3][3] 0.16 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1R5D' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.108 _refine.pdbx_overall_ESU_R_Free 0.105 _refine.overall_SU_ML 0.061 _refine.overall_SU_B 3.413 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3DJX _refine_analyze.Luzzati_coordinate_error_obs 0.196 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1882 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 307 _refine_hist.number_atoms_total 2231 _refine_hist.d_res_high 1.69 _refine_hist.d_res_low 27.77 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 1972 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.284 1.971 ? 2661 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.844 5.000 ? 246 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.825 24.865 ? 74 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.498 15.000 ? 365 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.941 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.088 0.200 ? 295 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1420 'X-RAY DIFFRACTION' ? r_nbd_refined 0.190 0.200 ? 940 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.293 0.200 ? 1347 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.133 0.200 ? 232 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.157 0.200 ? 56 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.137 0.200 ? 34 'X-RAY DIFFRACTION' ? r_mcbond_it 0.685 1.500 ? 1274 'X-RAY DIFFRACTION' ? r_mcangle_it 1.140 2.000 ? 2013 'X-RAY DIFFRACTION' ? r_scbond_it 1.862 3.000 ? 777 'X-RAY DIFFRACTION' ? r_scangle_it 2.907 4.500 ? 648 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.688 _refine_ls_shell.d_res_low 1.732 _refine_ls_shell.number_reflns_R_work 1706 _refine_ls_shell.R_factor_R_work 0.199 _refine_ls_shell.percent_reflns_obs 89.21 _refine_ls_shell.R_factor_R_free 0.255 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 72 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DJX _struct.title ;Bovine Seminal Ribonuclease- cytidine 5' phosphate complex ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DJX _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Ribonuclease, HYDROLASE, Allosteric enzyme, Endonuclease, Nuclease, Secreted' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? MET A 13 ? SER A 3 MET A 13 1 ? 11 HELX_P HELX_P2 2 SER A 21 ? SER A 23 ? SER A 21 SER A 23 5 ? 3 HELX_P HELX_P3 3 ASN A 24 ? ARG A 33 ? ASN A 24 ARG A 33 1 ? 10 HELX_P HELX_P4 4 SER A 50 ? VAL A 57 ? SER A 50 VAL A 57 1 ? 8 HELX_P HELX_P5 5 CYS A 58 ? GLN A 60 ? CYS A 58 GLN A 60 5 ? 3 HELX_P HELX_P6 6 SER B 3 ? MET B 13 ? SER B 3 MET B 13 1 ? 11 HELX_P HELX_P7 7 ASN B 24 ? ARG B 33 ? ASN B 24 ARG B 33 1 ? 10 HELX_P HELX_P8 8 SER B 50 ? VAL B 57 ? SER B 50 VAL B 57 1 ? 8 HELX_P HELX_P9 9 CYS B 58 ? GLN B 60 ? CYS B 58 GLN B 60 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 84 SG ? ? A CYS 26 A CYS 84 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 31 SG ? ? ? 1_555 B CYS 32 SG ? ? A CYS 31 B CYS 32 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf3 disulf ? ? A CYS 32 SG ? ? ? 1_555 B CYS 31 SG ? ? A CYS 32 B CYS 31 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf4 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 40 A CYS 95 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf5 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 110 SG ? ? A CYS 58 A CYS 110 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf6 disulf ? ? A CYS 65 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 65 A CYS 72 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf7 disulf ? ? B CYS 26 SG ? ? ? 1_555 B CYS 84 SG ? ? B CYS 26 B CYS 84 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf8 disulf ? ? B CYS 40 SG ? ? ? 1_555 B CYS 95 SG ? ? B CYS 40 B CYS 95 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf9 disulf ? ? B CYS 58 SG ? ? ? 1_555 B CYS 110 SG ? ? B CYS 58 B CYS 110 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf10 disulf ? ? B CYS 65 SG ? ? ? 1_555 B CYS 72 SG ? ? B CYS 65 B CYS 72 1_555 ? ? ? ? ? ? ? 2.031 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 92 A . ? TYR 92 A PRO 93 A ? PRO 93 A 1 4.96 2 LYS 113 A . ? LYS 113 A PRO 114 A ? PRO 114 A 1 0.05 3 TYR 92 B . ? TYR 92 B PRO 93 B ? PRO 93 B 1 6.31 4 LYS 113 B . ? LYS 113 B PRO 114 B ? PRO 114 B 1 7.51 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 5 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 43 ? VAL A 47 ? VAL A 43 VAL A 47 A 2 MET A 79 ? GLU A 86 ? MET A 79 GLU A 86 A 3 TYR A 97 ? GLY A 111 ? TYR A 97 GLY A 111 A 4 CYS A 72 ? GLN A 74 ? CYS A 72 GLN A 74 A 5 LYS A 61 ? VAL A 63 ? LYS A 61 VAL A 63 B 1 VAL A 43 ? VAL A 47 ? VAL A 43 VAL A 47 B 2 MET A 79 ? GLU A 86 ? MET A 79 GLU A 86 B 3 TYR A 97 ? GLY A 111 ? TYR A 97 GLY A 111 B 4 VAL A 116 ? VAL A 124 ? VAL A 116 VAL A 124 C 1 VAL B 43 ? VAL B 47 ? VAL B 43 VAL B 47 C 2 MET B 79 ? GLU B 86 ? MET B 79 GLU B 86 C 3 TYR B 97 ? GLY B 111 ? TYR B 97 GLY B 111 C 4 CYS B 72 ? GLN B 74 ? CYS B 72 GLN B 74 C 5 LYS B 61 ? VAL B 63 ? LYS B 61 VAL B 63 D 1 VAL B 43 ? VAL B 47 ? VAL B 43 VAL B 47 D 2 MET B 79 ? GLU B 86 ? MET B 79 GLU B 86 D 3 TYR B 97 ? GLY B 111 ? TYR B 97 GLY B 111 D 4 VAL B 116 ? VAL B 124 ? VAL B 116 VAL B 124 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 46 ? N PHE A 46 O THR A 82 ? O THR A 82 A 2 3 N ARG A 85 ? N ARG A 85 O LYS A 98 ? O LYS A 98 A 3 4 O VAL A 108 ? O VAL A 108 N TYR A 73 ? N TYR A 73 A 4 5 O GLN A 74 ? O GLN A 74 N LYS A 61 ? N LYS A 61 B 1 2 N PHE A 46 ? N PHE A 46 O THR A 82 ? O THR A 82 B 2 3 N ARG A 85 ? N ARG A 85 O LYS A 98 ? O LYS A 98 B 3 4 N ALA A 109 ? N ALA A 109 O VAL A 118 ? O VAL A 118 C 1 2 N PHE B 46 ? N PHE B 46 O THR B 82 ? O THR B 82 C 2 3 N ARG B 85 ? N ARG B 85 O LYS B 98 ? O LYS B 98 C 3 4 O VAL B 108 ? O VAL B 108 N TYR B 73 ? N TYR B 73 C 4 5 O GLN B 74 ? O GLN B 74 N LYS B 61 ? N LYS B 61 D 1 2 N PHE B 46 ? N PHE B 46 O THR B 82 ? O THR B 82 D 2 3 N ARG B 85 ? N ARG B 85 O LYS B 98 ? O LYS B 98 D 3 4 N ALA B 109 ? N ALA B 109 O VAL B 118 ? O VAL B 118 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A C5P 125 ? 17 'BINDING SITE FOR RESIDUE C5P A 125' AC2 Software B C5P 201 ? 12 'BINDING SITE FOR RESIDUE C5P B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 LYS A 1 ? LYS A 1 . ? 3_655 ? 2 AC1 17 LYS A 41 ? LYS A 41 . ? 1_555 ? 3 AC1 17 VAL A 43 ? VAL A 43 . ? 1_555 ? 4 AC1 17 ASN A 44 ? ASN A 44 . ? 1_555 ? 5 AC1 17 THR A 45 ? THR A 45 . ? 1_555 ? 6 AC1 17 HIS A 119 ? HIS A 119 . ? 1_555 ? 7 AC1 17 PHE A 120 ? PHE A 120 . ? 1_555 ? 8 AC1 17 HOH E . ? HOH A 129 . ? 1_555 ? 9 AC1 17 HOH E . ? HOH A 166 . ? 1_555 ? 10 AC1 17 HOH E . ? HOH A 188 . ? 1_555 ? 11 AC1 17 HOH E . ? HOH A 220 . ? 1_555 ? 12 AC1 17 HOH E . ? HOH A 260 . ? 1_555 ? 13 AC1 17 HOH E . ? HOH A 263 . ? 1_555 ? 14 AC1 17 HOH E . ? HOH A 269 . ? 1_555 ? 15 AC1 17 HIS B 12 ? HIS B 12 . ? 1_555 ? 16 AC1 17 HOH F . ? HOH B 222 . ? 1_555 ? 17 AC1 17 HOH F . ? HOH B 338 . ? 1_555 ? 18 AC2 12 HIS A 12 ? HIS A 12 . ? 1_555 ? 19 AC2 12 LYS B 1 ? LYS B 1 . ? 3_645 ? 20 AC2 12 LYS B 41 ? LYS B 41 . ? 1_555 ? 21 AC2 12 VAL B 43 ? VAL B 43 . ? 1_555 ? 22 AC2 12 ASN B 44 ? ASN B 44 . ? 1_555 ? 23 AC2 12 THR B 45 ? THR B 45 . ? 1_555 ? 24 AC2 12 HIS B 119 ? HIS B 119 . ? 1_555 ? 25 AC2 12 PHE B 120 ? PHE B 120 . ? 1_555 ? 26 AC2 12 HOH F . ? HOH B 221 . ? 1_555 ? 27 AC2 12 HOH F . ? HOH B 226 . ? 1_555 ? 28 AC2 12 HOH F . ? HOH B 284 . ? 1_555 ? 29 AC2 12 HOH F . ? HOH B 376 . ? 1_555 ? # _database_PDB_matrix.entry_id 3DJX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DJX _atom_sites.fract_transf_matrix[1][1] 0.020582 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016945 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012158 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 MET 29 29 29 MET MET A . n A 1 30 MET 30 30 30 MET MET A . n A 1 31 CYS 31 31 31 CYS CYS A . n A 1 32 CYS 32 32 32 CYS CYS A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 MET 35 35 35 MET MET A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 CYS 65 65 65 CYS CYS A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 CYS 72 72 72 CYS CYS A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 MET 79 79 79 MET MET A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 CYS 84 84 84 CYS CYS A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 GLN 101 101 101 GLN GLN A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 CYS 110 110 110 CYS CYS A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 VAL 124 124 124 VAL VAL A . n B 1 1 LYS 1 1 1 LYS LYS B . n B 1 2 GLU 2 2 2 GLU GLU B . n B 1 3 SER 3 3 3 SER SER B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 ALA 5 5 5 ALA ALA B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 PHE 8 8 8 PHE PHE B . n B 1 9 GLU 9 9 9 GLU GLU B . n B 1 10 ARG 10 10 10 ARG ARG B . n B 1 11 GLN 11 11 11 GLN GLN B . n B 1 12 HIS 12 12 12 HIS HIS B . n B 1 13 MET 13 13 13 MET MET B . n B 1 14 ASP 14 14 14 ASP ASP B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 ASN 17 17 17 ASN ASN B . n B 1 18 SER 18 18 18 SER SER B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 SER 21 21 21 SER SER B . n B 1 22 SER 22 22 22 SER SER B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 ASN 24 24 24 ASN ASN B . n B 1 25 TYR 25 25 25 TYR TYR B . n B 1 26 CYS 26 26 26 CYS CYS B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 MET 29 29 29 MET MET B . n B 1 30 MET 30 30 30 MET MET B . n B 1 31 CYS 31 31 31 CYS CYS B . n B 1 32 CYS 32 32 32 CYS CYS B . n B 1 33 ARG 33 33 33 ARG ARG B . n B 1 34 LYS 34 34 34 LYS LYS B . n B 1 35 MET 35 35 35 MET MET B . n B 1 36 THR 36 36 36 THR THR B . n B 1 37 GLN 37 37 37 GLN GLN B . n B 1 38 GLY 38 38 38 GLY GLY B . n B 1 39 LYS 39 39 39 LYS LYS B . n B 1 40 CYS 40 40 40 CYS CYS B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 PRO 42 42 42 PRO PRO B . n B 1 43 VAL 43 43 43 VAL VAL B . n B 1 44 ASN 44 44 44 ASN ASN B . n B 1 45 THR 45 45 45 THR THR B . n B 1 46 PHE 46 46 46 PHE PHE B . n B 1 47 VAL 47 47 47 VAL VAL B . n B 1 48 HIS 48 48 48 HIS HIS B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 SER 50 50 50 SER SER B . n B 1 51 LEU 51 51 51 LEU LEU B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 ASP 53 53 53 ASP ASP B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 VAL 57 57 57 VAL VAL B . n B 1 58 CYS 58 58 58 CYS CYS B . n B 1 59 SER 59 59 59 SER SER B . n B 1 60 GLN 60 60 60 GLN GLN B . n B 1 61 LYS 61 61 61 LYS LYS B . n B 1 62 LYS 62 62 62 LYS LYS B . n B 1 63 VAL 63 63 63 VAL VAL B . n B 1 64 THR 64 64 64 THR THR B . n B 1 65 CYS 65 65 65 CYS CYS B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 ASN 67 67 67 ASN ASN B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 GLN 69 69 69 GLN GLN B . n B 1 70 THR 70 70 70 THR THR B . n B 1 71 ASN 71 71 71 ASN ASN B . n B 1 72 CYS 72 72 72 CYS CYS B . n B 1 73 TYR 73 73 73 TYR TYR B . n B 1 74 GLN 74 74 74 GLN GLN B . n B 1 75 SER 75 75 75 SER SER B . n B 1 76 LYS 76 76 76 LYS LYS B . n B 1 77 SER 77 77 77 SER SER B . n B 1 78 THR 78 78 78 THR THR B . n B 1 79 MET 79 79 79 MET MET B . n B 1 80 ARG 80 80 80 ARG ARG B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 THR 82 82 82 THR THR B . n B 1 83 ASP 83 83 83 ASP ASP B . n B 1 84 CYS 84 84 84 CYS CYS B . n B 1 85 ARG 85 85 85 ARG ARG B . n B 1 86 GLU 86 86 86 GLU GLU B . n B 1 87 THR 87 87 87 THR THR B . n B 1 88 GLY 88 88 88 GLY GLY B . n B 1 89 SER 89 89 89 SER SER B . n B 1 90 SER 90 90 90 SER SER B . n B 1 91 LYS 91 91 91 LYS LYS B . n B 1 92 TYR 92 92 92 TYR TYR B . n B 1 93 PRO 93 93 93 PRO PRO B . n B 1 94 ASN 94 94 94 ASN ASN B . n B 1 95 CYS 95 95 95 CYS CYS B . n B 1 96 ALA 96 96 96 ALA ALA B . n B 1 97 TYR 97 97 97 TYR TYR B . n B 1 98 LYS 98 98 98 LYS LYS B . n B 1 99 THR 99 99 99 THR THR B . n B 1 100 THR 100 100 100 THR THR B . n B 1 101 GLN 101 101 101 GLN GLN B . n B 1 102 VAL 102 102 102 VAL VAL B . n B 1 103 GLU 103 103 103 GLU GLU B . n B 1 104 LYS 104 104 104 LYS LYS B . n B 1 105 HIS 105 105 105 HIS HIS B . n B 1 106 ILE 106 106 106 ILE ILE B . n B 1 107 ILE 107 107 107 ILE ILE B . n B 1 108 VAL 108 108 108 VAL VAL B . n B 1 109 ALA 109 109 109 ALA ALA B . n B 1 110 CYS 110 110 110 CYS CYS B . n B 1 111 GLY 111 111 111 GLY GLY B . n B 1 112 GLY 112 112 112 GLY GLY B . n B 1 113 LYS 113 113 113 LYS LYS B . n B 1 114 PRO 114 114 114 PRO PRO B . n B 1 115 SER 115 115 115 SER SER B . n B 1 116 VAL 116 116 116 VAL VAL B . n B 1 117 PRO 117 117 117 PRO PRO B . n B 1 118 VAL 118 118 118 VAL VAL B . n B 1 119 HIS 119 119 119 HIS HIS B . n B 1 120 PHE 120 120 120 PHE PHE B . n B 1 121 ASP 121 121 121 ASP ASP B . n B 1 122 ALA 122 122 122 ALA ALA B . n B 1 123 SER 123 123 123 SER SER B . n B 1 124 VAL 124 124 124 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 C5P 1 125 101 C5P C5P A . D 2 C5P 1 201 201 C5P C5P B . E 3 HOH 1 126 1 HOH HOH A . E 3 HOH 2 127 2 HOH HOH A . E 3 HOH 3 128 3 HOH HOH A . E 3 HOH 4 129 4 HOH HOH A . E 3 HOH 5 130 7 HOH HOH A . E 3 HOH 6 131 8 HOH HOH A . E 3 HOH 7 132 11 HOH HOH A . E 3 HOH 8 133 12 HOH HOH A . E 3 HOH 9 134 13 HOH HOH A . E 3 HOH 10 135 14 HOH HOH A . E 3 HOH 11 136 16 HOH HOH A . E 3 HOH 12 137 17 HOH HOH A . E 3 HOH 13 138 24 HOH HOH A . E 3 HOH 14 139 30 HOH HOH A . E 3 HOH 15 140 32 HOH HOH A . E 3 HOH 16 141 34 HOH HOH A . E 3 HOH 17 142 35 HOH HOH A . E 3 HOH 18 143 36 HOH HOH A . E 3 HOH 19 144 37 HOH HOH A . E 3 HOH 20 145 44 HOH HOH A . E 3 HOH 21 146 46 HOH HOH A . E 3 HOH 22 147 47 HOH HOH A . E 3 HOH 23 148 50 HOH HOH A . E 3 HOH 24 149 52 HOH HOH A . E 3 HOH 25 150 53 HOH HOH A . E 3 HOH 26 151 54 HOH HOH A . E 3 HOH 27 152 56 HOH HOH A . E 3 HOH 28 153 60 HOH HOH A . E 3 HOH 29 154 61 HOH HOH A . E 3 HOH 30 155 64 HOH HOH A . E 3 HOH 31 156 71 HOH HOH A . E 3 HOH 32 157 72 HOH HOH A . E 3 HOH 33 158 74 HOH HOH A . E 3 HOH 34 159 77 HOH HOH A . E 3 HOH 35 160 78 HOH HOH A . E 3 HOH 36 161 80 HOH HOH A . E 3 HOH 37 162 81 HOH HOH A . E 3 HOH 38 163 83 HOH HOH A . E 3 HOH 39 164 84 HOH HOH A . E 3 HOH 40 165 85 HOH HOH A . E 3 HOH 41 166 86 HOH HOH A . E 3 HOH 42 167 92 HOH HOH A . E 3 HOH 43 168 96 HOH HOH A . E 3 HOH 44 169 101 HOH HOH A . E 3 HOH 45 170 104 HOH HOH A . E 3 HOH 46 171 106 HOH HOH A . E 3 HOH 47 172 113 HOH HOH A . E 3 HOH 48 173 117 HOH HOH A . E 3 HOH 49 174 118 HOH HOH A . E 3 HOH 50 175 119 HOH HOH A . E 3 HOH 51 176 120 HOH HOH A . E 3 HOH 52 177 122 HOH HOH A . E 3 HOH 53 178 124 HOH HOH A . E 3 HOH 54 179 125 HOH HOH A . E 3 HOH 55 180 127 HOH HOH A . E 3 HOH 56 181 131 HOH HOH A . E 3 HOH 57 182 132 HOH HOH A . E 3 HOH 58 183 134 HOH HOH A . E 3 HOH 59 184 137 HOH HOH A . E 3 HOH 60 185 141 HOH HOH A . E 3 HOH 61 186 142 HOH HOH A . E 3 HOH 62 187 143 HOH HOH A . E 3 HOH 63 188 144 HOH HOH A . E 3 HOH 64 189 146 HOH HOH A . E 3 HOH 65 190 148 HOH HOH A . E 3 HOH 66 191 151 HOH HOH A . E 3 HOH 67 192 152 HOH HOH A . E 3 HOH 68 193 153 HOH HOH A . E 3 HOH 69 194 154 HOH HOH A . E 3 HOH 70 195 155 HOH HOH A . E 3 HOH 71 196 157 HOH HOH A . E 3 HOH 72 197 160 HOH HOH A . E 3 HOH 73 198 162 HOH HOH A . E 3 HOH 74 199 164 HOH HOH A . E 3 HOH 75 200 165 HOH HOH A . E 3 HOH 76 201 167 HOH HOH A . E 3 HOH 77 202 172 HOH HOH A . E 3 HOH 78 203 173 HOH HOH A . E 3 HOH 79 204 174 HOH HOH A . E 3 HOH 80 205 175 HOH HOH A . E 3 HOH 81 206 178 HOH HOH A . E 3 HOH 82 207 180 HOH HOH A . E 3 HOH 83 208 182 HOH HOH A . E 3 HOH 84 209 186 HOH HOH A . E 3 HOH 85 210 189 HOH HOH A . E 3 HOH 86 211 190 HOH HOH A . E 3 HOH 87 212 191 HOH HOH A . E 3 HOH 88 213 192 HOH HOH A . E 3 HOH 89 214 194 HOH HOH A . E 3 HOH 90 216 200 HOH HOH A . E 3 HOH 91 217 201 HOH HOH A . E 3 HOH 92 218 203 HOH HOH A . E 3 HOH 93 219 204 HOH HOH A . E 3 HOH 94 220 206 HOH HOH A . E 3 HOH 95 221 213 HOH HOH A . E 3 HOH 96 222 215 HOH HOH A . E 3 HOH 97 223 217 HOH HOH A . E 3 HOH 98 224 218 HOH HOH A . E 3 HOH 99 225 221 HOH HOH A . E 3 HOH 100 226 225 HOH HOH A . E 3 HOH 101 227 226 HOH HOH A . E 3 HOH 102 228 227 HOH HOH A . E 3 HOH 103 229 228 HOH HOH A . E 3 HOH 104 230 231 HOH HOH A . E 3 HOH 105 231 232 HOH HOH A . E 3 HOH 106 232 233 HOH HOH A . E 3 HOH 107 233 234 HOH HOH A . E 3 HOH 108 234 242 HOH HOH A . E 3 HOH 109 235 245 HOH HOH A . E 3 HOH 110 236 248 HOH HOH A . E 3 HOH 111 237 249 HOH HOH A . E 3 HOH 112 238 250 HOH HOH A . E 3 HOH 113 239 252 HOH HOH A . E 3 HOH 114 240 253 HOH HOH A . E 3 HOH 115 241 254 HOH HOH A . E 3 HOH 116 242 257 HOH HOH A . E 3 HOH 117 243 258 HOH HOH A . E 3 HOH 118 244 259 HOH HOH A . E 3 HOH 119 245 260 HOH HOH A . E 3 HOH 120 246 261 HOH HOH A . E 3 HOH 121 247 262 HOH HOH A . E 3 HOH 122 248 263 HOH HOH A . E 3 HOH 123 249 264 HOH HOH A . E 3 HOH 124 250 267 HOH HOH A . E 3 HOH 125 251 274 HOH HOH A . E 3 HOH 126 252 276 HOH HOH A . E 3 HOH 127 253 277 HOH HOH A . E 3 HOH 128 254 278 HOH HOH A . E 3 HOH 129 255 279 HOH HOH A . E 3 HOH 130 256 280 HOH HOH A . E 3 HOH 131 257 281 HOH HOH A . E 3 HOH 132 258 282 HOH HOH A . E 3 HOH 133 259 283 HOH HOH A . E 3 HOH 134 260 284 HOH HOH A . E 3 HOH 135 261 285 HOH HOH A . E 3 HOH 136 262 286 HOH HOH A . E 3 HOH 137 263 287 HOH HOH A . E 3 HOH 138 264 288 HOH HOH A . E 3 HOH 139 267 291 HOH HOH A . E 3 HOH 140 268 292 HOH HOH A . E 3 HOH 141 269 293 HOH HOH A . E 3 HOH 142 270 306 HOH HOH A . E 3 HOH 143 271 307 HOH HOH A . F 3 HOH 1 215 199 HOH HOH B . F 3 HOH 2 216 289 HOH HOH B . F 3 HOH 3 217 290 HOH HOH B . F 3 HOH 4 218 5 HOH HOH B . F 3 HOH 5 219 6 HOH HOH B . F 3 HOH 6 220 9 HOH HOH B . F 3 HOH 7 221 10 HOH HOH B . F 3 HOH 8 222 15 HOH HOH B . F 3 HOH 9 223 18 HOH HOH B . F 3 HOH 10 224 19 HOH HOH B . F 3 HOH 11 225 20 HOH HOH B . F 3 HOH 12 226 21 HOH HOH B . F 3 HOH 13 227 22 HOH HOH B . F 3 HOH 14 228 23 HOH HOH B . F 3 HOH 15 229 25 HOH HOH B . F 3 HOH 16 230 26 HOH HOH B . F 3 HOH 17 231 27 HOH HOH B . F 3 HOH 18 232 28 HOH HOH B . F 3 HOH 19 233 29 HOH HOH B . F 3 HOH 20 234 31 HOH HOH B . F 3 HOH 21 235 33 HOH HOH B . F 3 HOH 22 236 38 HOH HOH B . F 3 HOH 23 237 39 HOH HOH B . F 3 HOH 24 238 40 HOH HOH B . F 3 HOH 25 239 41 HOH HOH B . F 3 HOH 26 240 42 HOH HOH B . F 3 HOH 27 241 43 HOH HOH B . F 3 HOH 28 242 45 HOH HOH B . F 3 HOH 29 243 48 HOH HOH B . F 3 HOH 30 244 49 HOH HOH B . F 3 HOH 31 245 51 HOH HOH B . F 3 HOH 32 246 55 HOH HOH B . F 3 HOH 33 247 57 HOH HOH B . F 3 HOH 34 248 58 HOH HOH B . F 3 HOH 35 249 59 HOH HOH B . F 3 HOH 36 250 62 HOH HOH B . F 3 HOH 37 251 63 HOH HOH B . F 3 HOH 38 252 65 HOH HOH B . F 3 HOH 39 253 66 HOH HOH B . F 3 HOH 40 254 67 HOH HOH B . F 3 HOH 41 255 68 HOH HOH B . F 3 HOH 42 256 69 HOH HOH B . F 3 HOH 43 257 70 HOH HOH B . F 3 HOH 44 258 73 HOH HOH B . F 3 HOH 45 259 75 HOH HOH B . F 3 HOH 46 260 76 HOH HOH B . F 3 HOH 47 261 79 HOH HOH B . F 3 HOH 48 262 82 HOH HOH B . F 3 HOH 49 263 87 HOH HOH B . F 3 HOH 50 264 88 HOH HOH B . F 3 HOH 51 265 89 HOH HOH B . F 3 HOH 52 266 90 HOH HOH B . F 3 HOH 53 267 91 HOH HOH B . F 3 HOH 54 268 93 HOH HOH B . F 3 HOH 55 269 94 HOH HOH B . F 3 HOH 56 270 95 HOH HOH B . F 3 HOH 57 271 97 HOH HOH B . F 3 HOH 58 272 98 HOH HOH B . F 3 HOH 59 273 99 HOH HOH B . F 3 HOH 60 274 100 HOH HOH B . F 3 HOH 61 275 102 HOH HOH B . F 3 HOH 62 276 103 HOH HOH B . F 3 HOH 63 277 105 HOH HOH B . F 3 HOH 64 278 107 HOH HOH B . F 3 HOH 65 279 108 HOH HOH B . F 3 HOH 66 280 109 HOH HOH B . F 3 HOH 67 281 110 HOH HOH B . F 3 HOH 68 282 111 HOH HOH B . F 3 HOH 69 283 112 HOH HOH B . F 3 HOH 70 284 114 HOH HOH B . F 3 HOH 71 285 115 HOH HOH B . F 3 HOH 72 286 116 HOH HOH B . F 3 HOH 73 287 121 HOH HOH B . F 3 HOH 74 288 123 HOH HOH B . F 3 HOH 75 289 126 HOH HOH B . F 3 HOH 76 290 128 HOH HOH B . F 3 HOH 77 291 129 HOH HOH B . F 3 HOH 78 292 130 HOH HOH B . F 3 HOH 79 293 133 HOH HOH B . F 3 HOH 80 294 135 HOH HOH B . F 3 HOH 81 295 136 HOH HOH B . F 3 HOH 82 296 138 HOH HOH B . F 3 HOH 83 297 139 HOH HOH B . F 3 HOH 84 298 140 HOH HOH B . F 3 HOH 85 299 145 HOH HOH B . F 3 HOH 86 300 147 HOH HOH B . F 3 HOH 87 301 149 HOH HOH B . F 3 HOH 88 302 150 HOH HOH B . F 3 HOH 89 303 156 HOH HOH B . F 3 HOH 90 304 158 HOH HOH B . F 3 HOH 91 305 159 HOH HOH B . F 3 HOH 92 306 161 HOH HOH B . F 3 HOH 93 307 163 HOH HOH B . F 3 HOH 94 308 166 HOH HOH B . F 3 HOH 95 309 168 HOH HOH B . F 3 HOH 96 310 169 HOH HOH B . F 3 HOH 97 311 170 HOH HOH B . F 3 HOH 98 312 171 HOH HOH B . F 3 HOH 99 313 176 HOH HOH B . F 3 HOH 100 314 177 HOH HOH B . F 3 HOH 101 315 179 HOH HOH B . F 3 HOH 102 316 181 HOH HOH B . F 3 HOH 103 317 183 HOH HOH B . F 3 HOH 104 318 184 HOH HOH B . F 3 HOH 105 319 185 HOH HOH B . F 3 HOH 106 320 187 HOH HOH B . F 3 HOH 107 321 188 HOH HOH B . F 3 HOH 108 322 193 HOH HOH B . F 3 HOH 109 323 195 HOH HOH B . F 3 HOH 110 324 196 HOH HOH B . F 3 HOH 111 325 197 HOH HOH B . F 3 HOH 112 326 198 HOH HOH B . F 3 HOH 113 327 202 HOH HOH B . F 3 HOH 114 328 205 HOH HOH B . F 3 HOH 115 329 207 HOH HOH B . F 3 HOH 116 330 208 HOH HOH B . F 3 HOH 117 331 209 HOH HOH B . F 3 HOH 118 332 210 HOH HOH B . F 3 HOH 119 333 211 HOH HOH B . F 3 HOH 120 334 212 HOH HOH B . F 3 HOH 121 335 214 HOH HOH B . F 3 HOH 122 336 216 HOH HOH B . F 3 HOH 123 337 219 HOH HOH B . F 3 HOH 124 338 220 HOH HOH B . F 3 HOH 125 339 222 HOH HOH B . F 3 HOH 126 340 223 HOH HOH B . F 3 HOH 127 341 224 HOH HOH B . F 3 HOH 128 342 229 HOH HOH B . F 3 HOH 129 343 230 HOH HOH B . F 3 HOH 130 344 235 HOH HOH B . F 3 HOH 131 345 236 HOH HOH B . F 3 HOH 132 346 237 HOH HOH B . F 3 HOH 133 347 238 HOH HOH B . F 3 HOH 134 348 239 HOH HOH B . F 3 HOH 135 349 240 HOH HOH B . F 3 HOH 136 350 241 HOH HOH B . F 3 HOH 137 351 243 HOH HOH B . F 3 HOH 138 352 244 HOH HOH B . F 3 HOH 139 353 246 HOH HOH B . F 3 HOH 140 354 247 HOH HOH B . F 3 HOH 141 355 251 HOH HOH B . F 3 HOH 142 356 255 HOH HOH B . F 3 HOH 143 357 256 HOH HOH B . F 3 HOH 144 358 265 HOH HOH B . F 3 HOH 145 359 266 HOH HOH B . F 3 HOH 146 360 268 HOH HOH B . F 3 HOH 147 361 269 HOH HOH B . F 3 HOH 148 362 270 HOH HOH B . F 3 HOH 149 363 271 HOH HOH B . F 3 HOH 150 364 272 HOH HOH B . F 3 HOH 151 365 273 HOH HOH B . F 3 HOH 152 366 275 HOH HOH B . F 3 HOH 153 367 294 HOH HOH B . F 3 HOH 154 368 295 HOH HOH B . F 3 HOH 155 369 296 HOH HOH B . F 3 HOH 156 370 297 HOH HOH B . F 3 HOH 157 371 298 HOH HOH B . F 3 HOH 158 372 299 HOH HOH B . F 3 HOH 159 373 300 HOH HOH B . F 3 HOH 160 374 301 HOH HOH B . F 3 HOH 161 375 302 HOH HOH B . F 3 HOH 162 376 303 HOH HOH B . F 3 HOH 163 377 304 HOH HOH B . F 3 HOH 164 378 305 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3840 ? 1 MORE -26.2 ? 1 'SSA (A^2)' 13940 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' diffrn_source 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 11.0869 19.5633 23.2512 0.0324 0.0530 -0.0004 -0.0214 -0.0110 0.0098 6.4828 1.8274 9.1638 -0.4176 -1.0676 1.1575 0.0796 -0.4102 0.0757 0.2785 -0.0813 -0.0981 0.0780 0.4673 0.0018 'X-RAY DIFFRACTION' 2 ? refined 6.9156 22.6248 9.5224 0.0521 0.0481 0.0134 0.0090 -0.0094 0.0118 6.1972 6.9707 4.8553 -2.9073 2.3211 -5.0435 0.1778 0.4762 0.2624 -0.4547 -0.1693 0.0383 0.2677 0.0696 -0.0084 'X-RAY DIFFRACTION' 3 ? refined 18.6649 27.3673 5.5442 0.0043 0.0185 0.0407 -0.0036 0.0018 -0.0041 4.2087 2.3685 3.6246 1.3484 -0.0479 -1.2108 -0.0008 0.0879 0.0281 -0.2034 0.0584 0.2587 0.0907 -0.2203 -0.0576 'X-RAY DIFFRACTION' 4 ? refined 23.8402 32.1517 16.7676 0.0693 0.1233 -0.0347 -0.0170 0.0203 -0.0188 13.0913 14.0693 14.2191 -7.0931 -6.6838 14.1338 0.0627 -0.9927 0.0875 1.1964 -0.0782 0.0005 0.2167 -0.0585 0.0155 'X-RAY DIFFRACTION' 5 ? refined 34.0825 31.2999 1.6962 0.0494 0.0170 0.0458 -0.0016 -0.0061 -0.0049 3.1194 1.0691 1.1704 0.4774 -0.7450 0.0030 0.0336 0.0146 -0.0166 -0.0383 -0.0089 0.0142 -0.0322 -0.0311 -0.0247 'X-RAY DIFFRACTION' 6 ? refined 42.9924 43.3913 3.1774 0.0530 -0.0114 0.0146 -0.0245 0.0083 0.0003 1.5409 5.4957 6.3974 -0.0243 -0.6415 4.4445 0.1397 -0.0063 0.0237 -0.1891 0.0910 -0.1614 -0.3394 -0.0571 -0.2306 'X-RAY DIFFRACTION' 7 ? refined 36.4585 35.2873 -4.6086 0.0771 0.0446 0.0235 0.0099 -0.0071 0.0051 5.1531 3.0243 2.2369 2.3396 0.8043 0.7488 -0.0618 0.5198 -0.1585 -0.2375 0.1862 -0.1396 0.0255 0.1631 -0.1244 'X-RAY DIFFRACTION' 8 ? refined 18.1727 39.4369 6.4562 0.0133 0.0005 0.0905 0.0257 0.0281 -0.0342 3.5274 3.9664 8.6895 0.3059 -2.7376 -1.7632 0.5019 -0.0605 0.6684 0.2711 -0.0906 0.1430 -0.6892 -0.6932 -0.4113 'X-RAY DIFFRACTION' 9 ? refined 15.3267 35.8232 14.5517 -0.0258 0.0936 0.0503 -0.0003 0.0762 -0.0265 2.7156 2.2639 19.1765 -1.7351 -2.4921 -2.8250 0.2919 -0.7885 -0.0080 0.3345 0.3930 0.6199 -0.1352 -0.5836 -0.6849 'X-RAY DIFFRACTION' 10 ? refined 22.0939 34.7179 -3.7659 0.0618 -0.0145 0.0570 0.0211 -0.0294 0.0344 21.5334 1.2188 25.7071 5.1156 -19.4263 -4.4461 -0.1704 0.6104 -0.0530 -0.1851 0.1398 0.2481 0.1969 -0.5929 0.0306 'X-RAY DIFFRACTION' 11 ? refined 38.3472 37.1785 0.4721 0.0417 0.0233 0.0350 -0.0194 -0.0087 0.0176 5.0420 1.6843 5.8969 -1.8934 4.7816 -1.6916 -0.1053 0.2611 0.0907 -0.0241 0.0260 -0.0289 -0.1980 0.1619 0.0793 'X-RAY DIFFRACTION' 12 ? refined 39.9343 35.4128 5.0675 0.0462 0.0256 0.0594 -0.0271 -0.0104 0.0134 5.2289 4.6719 3.0472 -4.1254 2.8667 -1.6191 -0.1375 -0.1416 0.2166 -0.0120 0.1138 -0.1471 -0.0764 -0.0829 0.0238 'X-RAY DIFFRACTION' 13 ? refined 34.8746 28.5582 10.5551 0.0256 0.0445 0.0092 -0.0116 -0.0021 0.0174 6.4253 2.5131 3.2579 0.5445 1.3180 -0.1408 -0.0278 -0.4886 -0.1047 0.1884 -0.0784 -0.1099 -0.1123 -0.0107 0.1062 'X-RAY DIFFRACTION' 14 ? refined 20.7197 20.6980 0.6808 0.0340 0.0343 0.0279 -0.0186 0.0199 -0.0093 2.9313 0.8172 1.1447 0.6319 -1.8076 -0.5327 -0.0968 0.3205 0.1120 -0.1641 0.1165 -0.0078 -0.0019 -0.1276 -0.0197 'X-RAY DIFFRACTION' 15 ? refined 18.2891 20.9614 11.8511 0.0003 0.0463 0.0326 -0.0092 0.0122 0.0085 1.7061 3.9547 2.3952 1.7656 0.2725 0.5650 0.1128 0.0777 -0.0253 -0.1110 -0.0346 -0.0709 -0.0728 0.0973 -0.0782 'X-RAY DIFFRACTION' 16 ? refined 22.8318 15.8649 17.7353 0.0076 0.1424 0.0675 -0.0322 -0.0856 0.0224 20.5434 14.8991 7.8383 -17.4500 1.7839 -2.2824 0.1082 -0.6337 -0.0959 0.8367 0.1442 -1.0039 -0.0407 0.9486 -0.2524 'X-RAY DIFFRACTION' 17 ? refined 3.6519 16.2411 14.5518 0.0533 0.0356 0.0396 0.0047 -0.0120 -0.0093 2.0189 1.2000 1.6127 -0.1910 -0.6396 -0.4131 0.0375 -0.0276 -0.0508 0.0325 -0.0104 0.0136 0.0427 -0.0483 -0.0271 'X-RAY DIFFRACTION' 18 ? refined 0.6474 2.9437 20.9532 0.0591 0.0435 -0.0150 -0.0307 -0.0118 0.0312 14.8873 11.0608 4.8282 -8.9893 8.0923 -6.4416 0.0453 0.0612 -0.4562 -0.0708 0.2005 0.3537 0.1129 0.0162 -0.2458 'X-RAY DIFFRACTION' 19 ? refined -2.8123 8.9881 19.1714 0.0033 0.0459 0.0173 -0.0067 0.0019 0.0196 2.1505 6.4396 13.5071 -0.6505 2.2531 -6.9746 0.0342 -0.0464 -0.1083 0.0360 0.3250 0.2979 0.0334 -0.4979 -0.3592 'X-RAY DIFFRACTION' 20 ? refined 8.5851 12.9531 7.1701 0.0927 0.0310 0.0139 0.0157 -0.0034 -0.0072 7.7068 1.8318 1.5291 0.1993 -0.1154 0.1732 0.0125 0.0614 -0.1970 -0.0667 0.0043 -0.1122 0.1627 0.0395 -0.0169 'X-RAY DIFFRACTION' 21 ? refined 27.9989 10.0473 9.2945 -0.0681 0.2549 0.0514 0.1532 0.0629 0.1087 12.9803 16.5293 35.0339 3.9273 14.7368 15.5390 0.0804 1.0311 -0.0486 -0.3018 -0.0371 -0.6878 0.3748 3.1176 -0.0432 'X-RAY DIFFRACTION' 22 ? refined 15.5900 12.7906 3.6568 0.0597 0.0187 0.0289 0.0277 0.0121 -0.0057 11.1255 3.2466 4.3837 4.0877 -1.4602 1.8673 -0.0910 0.6785 0.2306 -0.1921 0.0722 0.0113 0.2356 0.2154 0.0188 'X-RAY DIFFRACTION' 23 ? refined 1.2652 11.0545 11.6749 0.0621 0.0205 0.0110 0.0003 0.0046 -0.0065 2.1303 1.6484 8.5600 0.5352 0.4335 -0.8183 0.0627 0.0992 -0.0433 -0.1644 0.0034 0.0243 0.3352 -0.1390 -0.0660 'X-RAY DIFFRACTION' 24 ? refined 2.5939 13.1464 21.1980 0.0422 0.0314 0.0184 -0.0054 -0.0045 0.0062 1.0046 3.8356 8.3925 -0.7729 -1.2067 3.7325 0.0704 0.0078 -0.0582 0.0103 0.0331 0.0054 0.0557 -0.0271 -0.1035 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 1 A 11 A 11 ? 'X-RAY DIFFRACTION' ? 2 2 A 12 A 12 A 18 A 18 ? 'X-RAY DIFFRACTION' ? 3 3 A 19 A 19 A 33 A 33 ? 'X-RAY DIFFRACTION' ? 4 4 A 34 A 34 A 39 A 39 ? 'X-RAY DIFFRACTION' ? 5 5 A 40 A 40 A 59 A 59 ? 'X-RAY DIFFRACTION' ? 6 6 A 60 A 60 A 71 A 71 ? 'X-RAY DIFFRACTION' ? 7 7 A 72 A 72 A 82 A 82 ? 'X-RAY DIFFRACTION' ? 8 8 A 83 A 83 A 90 A 90 ? 'X-RAY DIFFRACTION' ? 9 9 A 91 A 91 A 97 A 97 ? 'X-RAY DIFFRACTION' ? 10 10 A 98 A 98 A 103 A 103 ? 'X-RAY DIFFRACTION' ? 11 11 A 104 A 104 A 112 A 112 ? 'X-RAY DIFFRACTION' ? 12 12 A 113 A 113 A 124 A 124 ? 'X-RAY DIFFRACTION' ? 13 13 B 1 B 1 B 14 B 14 ? 'X-RAY DIFFRACTION' ? 14 14 B 15 B 15 B 27 B 27 ? 'X-RAY DIFFRACTION' ? 15 15 B 28 B 28 B 33 B 33 ? 'X-RAY DIFFRACTION' ? 16 16 B 34 B 34 B 39 B 39 ? 'X-RAY DIFFRACTION' ? 17 17 B 40 B 40 B 61 B 61 ? 'X-RAY DIFFRACTION' ? 18 18 B 62 B 62 B 68 B 68 ? 'X-RAY DIFFRACTION' ? 19 19 B 69 B 69 B 77 B 77 ? 'X-RAY DIFFRACTION' ? 20 20 B 78 B 78 B 86 B 86 ? 'X-RAY DIFFRACTION' ? 21 21 B 87 B 87 B 95 B 95 ? 'X-RAY DIFFRACTION' ? 22 22 B 96 B 96 B 101 B 101 ? 'X-RAY DIFFRACTION' ? 23 23 B 102 B 102 B 110 B 110 ? 'X-RAY DIFFRACTION' ? 24 24 B 111 B 111 B 124 B 124 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0037 ? 1 MAR345 'data collection' . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 REFMAC phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 60 ? ? -100.97 -132.79 2 1 ASN A 94 ? ? -101.49 77.22 3 1 GLN B 60 ? ? -99.74 -142.83 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C5P O3P O N N 74 C5P P P N N 75 C5P O1P O N N 76 C5P O2P O N N 77 C5P "O5'" O N N 78 C5P "C5'" C N N 79 C5P "C4'" C N R 80 C5P "O4'" O N N 81 C5P "C3'" C N S 82 C5P "O3'" O N N 83 C5P "C2'" C N R 84 C5P "O2'" O N N 85 C5P "C1'" C N R 86 C5P N1 N N N 87 C5P C2 C N N 88 C5P N3 N N N 89 C5P C4 C N N 90 C5P C5 C N N 91 C5P C6 C N N 92 C5P O2 O N N 93 C5P N4 N N N 94 C5P HOP3 H N N 95 C5P HOP2 H N N 96 C5P "H5'1" H N N 97 C5P "H5'2" H N N 98 C5P "H4'" H N N 99 C5P "H3'" H N N 100 C5P "HO3'" H N N 101 C5P "H2'1" H N N 102 C5P "HO2'" H N N 103 C5P "H1'" H N N 104 C5P H5 H N N 105 C5P H6 H N N 106 C5P HN41 H N N 107 C5P HN42 H N N 108 CYS N N N N 109 CYS CA C N R 110 CYS C C N N 111 CYS O O N N 112 CYS CB C N N 113 CYS SG S N N 114 CYS OXT O N N 115 CYS H H N N 116 CYS H2 H N N 117 CYS HA H N N 118 CYS HB2 H N N 119 CYS HB3 H N N 120 CYS HG H N N 121 CYS HXT H N N 122 GLN N N N N 123 GLN CA C N S 124 GLN C C N N 125 GLN O O N N 126 GLN CB C N N 127 GLN CG C N N 128 GLN CD C N N 129 GLN OE1 O N N 130 GLN NE2 N N N 131 GLN OXT O N N 132 GLN H H N N 133 GLN H2 H N N 134 GLN HA H N N 135 GLN HB2 H N N 136 GLN HB3 H N N 137 GLN HG2 H N N 138 GLN HG3 H N N 139 GLN HE21 H N N 140 GLN HE22 H N N 141 GLN HXT H N N 142 GLU N N N N 143 GLU CA C N S 144 GLU C C N N 145 GLU O O N N 146 GLU CB C N N 147 GLU CG C N N 148 GLU CD C N N 149 GLU OE1 O N N 150 GLU OE2 O N N 151 GLU OXT O N N 152 GLU H H N N 153 GLU H2 H N N 154 GLU HA H N N 155 GLU HB2 H N N 156 GLU HB3 H N N 157 GLU HG2 H N N 158 GLU HG3 H N N 159 GLU HE2 H N N 160 GLU HXT H N N 161 GLY N N N N 162 GLY CA C N N 163 GLY C C N N 164 GLY O O N N 165 GLY OXT O N N 166 GLY H H N N 167 GLY H2 H N N 168 GLY HA2 H N N 169 GLY HA3 H N N 170 GLY HXT H N N 171 HIS N N N N 172 HIS CA C N S 173 HIS C C N N 174 HIS O O N N 175 HIS CB C N N 176 HIS CG C Y N 177 HIS ND1 N Y N 178 HIS CD2 C Y N 179 HIS CE1 C Y N 180 HIS NE2 N Y N 181 HIS OXT O N N 182 HIS H H N N 183 HIS H2 H N N 184 HIS HA H N N 185 HIS HB2 H N N 186 HIS HB3 H N N 187 HIS HD1 H N N 188 HIS HD2 H N N 189 HIS HE1 H N N 190 HIS HE2 H N N 191 HIS HXT H N N 192 HOH O O N N 193 HOH H1 H N N 194 HOH H2 H N N 195 ILE N N N N 196 ILE CA C N S 197 ILE C C N N 198 ILE O O N N 199 ILE CB C N S 200 ILE CG1 C N N 201 ILE CG2 C N N 202 ILE CD1 C N N 203 ILE OXT O N N 204 ILE H H N N 205 ILE H2 H N N 206 ILE HA H N N 207 ILE HB H N N 208 ILE HG12 H N N 209 ILE HG13 H N N 210 ILE HG21 H N N 211 ILE HG22 H N N 212 ILE HG23 H N N 213 ILE HD11 H N N 214 ILE HD12 H N N 215 ILE HD13 H N N 216 ILE HXT H N N 217 LEU N N N N 218 LEU CA C N S 219 LEU C C N N 220 LEU O O N N 221 LEU CB C N N 222 LEU CG C N N 223 LEU CD1 C N N 224 LEU CD2 C N N 225 LEU OXT O N N 226 LEU H H N N 227 LEU H2 H N N 228 LEU HA H N N 229 LEU HB2 H N N 230 LEU HB3 H N N 231 LEU HG H N N 232 LEU HD11 H N N 233 LEU HD12 H N N 234 LEU HD13 H N N 235 LEU HD21 H N N 236 LEU HD22 H N N 237 LEU HD23 H N N 238 LEU HXT H N N 239 LYS N N N N 240 LYS CA C N S 241 LYS C C N N 242 LYS O O N N 243 LYS CB C N N 244 LYS CG C N N 245 LYS CD C N N 246 LYS CE C N N 247 LYS NZ N N N 248 LYS OXT O N N 249 LYS H H N N 250 LYS H2 H N N 251 LYS HA H N N 252 LYS HB2 H N N 253 LYS HB3 H N N 254 LYS HG2 H N N 255 LYS HG3 H N N 256 LYS HD2 H N N 257 LYS HD3 H N N 258 LYS HE2 H N N 259 LYS HE3 H N N 260 LYS HZ1 H N N 261 LYS HZ2 H N N 262 LYS HZ3 H N N 263 LYS HXT H N N 264 MET N N N N 265 MET CA C N S 266 MET C C N N 267 MET O O N N 268 MET CB C N N 269 MET CG C N N 270 MET SD S N N 271 MET CE C N N 272 MET OXT O N N 273 MET H H N N 274 MET H2 H N N 275 MET HA H N N 276 MET HB2 H N N 277 MET HB3 H N N 278 MET HG2 H N N 279 MET HG3 H N N 280 MET HE1 H N N 281 MET HE2 H N N 282 MET HE3 H N N 283 MET HXT H N N 284 PHE N N N N 285 PHE CA C N S 286 PHE C C N N 287 PHE O O N N 288 PHE CB C N N 289 PHE CG C Y N 290 PHE CD1 C Y N 291 PHE CD2 C Y N 292 PHE CE1 C Y N 293 PHE CE2 C Y N 294 PHE CZ C Y N 295 PHE OXT O N N 296 PHE H H N N 297 PHE H2 H N N 298 PHE HA H N N 299 PHE HB2 H N N 300 PHE HB3 H N N 301 PHE HD1 H N N 302 PHE HD2 H N N 303 PHE HE1 H N N 304 PHE HE2 H N N 305 PHE HZ H N N 306 PHE HXT H N N 307 PRO N N N N 308 PRO CA C N S 309 PRO C C N N 310 PRO O O N N 311 PRO CB C N N 312 PRO CG C N N 313 PRO CD C N N 314 PRO OXT O N N 315 PRO H H N N 316 PRO HA H N N 317 PRO HB2 H N N 318 PRO HB3 H N N 319 PRO HG2 H N N 320 PRO HG3 H N N 321 PRO HD2 H N N 322 PRO HD3 H N N 323 PRO HXT H N N 324 SER N N N N 325 SER CA C N S 326 SER C C N N 327 SER O O N N 328 SER CB C N N 329 SER OG O N N 330 SER OXT O N N 331 SER H H N N 332 SER H2 H N N 333 SER HA H N N 334 SER HB2 H N N 335 SER HB3 H N N 336 SER HG H N N 337 SER HXT H N N 338 THR N N N N 339 THR CA C N S 340 THR C C N N 341 THR O O N N 342 THR CB C N R 343 THR OG1 O N N 344 THR CG2 C N N 345 THR OXT O N N 346 THR H H N N 347 THR H2 H N N 348 THR HA H N N 349 THR HB H N N 350 THR HG1 H N N 351 THR HG21 H N N 352 THR HG22 H N N 353 THR HG23 H N N 354 THR HXT H N N 355 TYR N N N N 356 TYR CA C N S 357 TYR C C N N 358 TYR O O N N 359 TYR CB C N N 360 TYR CG C Y N 361 TYR CD1 C Y N 362 TYR CD2 C Y N 363 TYR CE1 C Y N 364 TYR CE2 C Y N 365 TYR CZ C Y N 366 TYR OH O N N 367 TYR OXT O N N 368 TYR H H N N 369 TYR H2 H N N 370 TYR HA H N N 371 TYR HB2 H N N 372 TYR HB3 H N N 373 TYR HD1 H N N 374 TYR HD2 H N N 375 TYR HE1 H N N 376 TYR HE2 H N N 377 TYR HH H N N 378 TYR HXT H N N 379 VAL N N N N 380 VAL CA C N S 381 VAL C C N N 382 VAL O O N N 383 VAL CB C N N 384 VAL CG1 C N N 385 VAL CG2 C N N 386 VAL OXT O N N 387 VAL H H N N 388 VAL H2 H N N 389 VAL HA H N N 390 VAL HB H N N 391 VAL HG11 H N N 392 VAL HG12 H N N 393 VAL HG13 H N N 394 VAL HG21 H N N 395 VAL HG22 H N N 396 VAL HG23 H N N 397 VAL HXT H N N 398 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C5P O3P P sing N N 70 C5P O3P HOP3 sing N N 71 C5P P O1P doub N N 72 C5P P O2P sing N N 73 C5P P "O5'" sing N N 74 C5P O2P HOP2 sing N N 75 C5P "O5'" "C5'" sing N N 76 C5P "C5'" "C4'" sing N N 77 C5P "C5'" "H5'1" sing N N 78 C5P "C5'" "H5'2" sing N N 79 C5P "C4'" "O4'" sing N N 80 C5P "C4'" "C3'" sing N N 81 C5P "C4'" "H4'" sing N N 82 C5P "O4'" "C1'" sing N N 83 C5P "C3'" "O3'" sing N N 84 C5P "C3'" "C2'" sing N N 85 C5P "C3'" "H3'" sing N N 86 C5P "O3'" "HO3'" sing N N 87 C5P "C2'" "O2'" sing N N 88 C5P "C2'" "C1'" sing N N 89 C5P "C2'" "H2'1" sing N N 90 C5P "O2'" "HO2'" sing N N 91 C5P "C1'" N1 sing N N 92 C5P "C1'" "H1'" sing N N 93 C5P N1 C2 sing N N 94 C5P N1 C6 sing N N 95 C5P C2 N3 sing N N 96 C5P C2 O2 doub N N 97 C5P N3 C4 doub N N 98 C5P C4 C5 sing N N 99 C5P C4 N4 sing N N 100 C5P C5 C6 doub N N 101 C5P C5 H5 sing N N 102 C5P C6 H6 sing N N 103 C5P N4 HN41 sing N N 104 C5P N4 HN42 sing N N 105 CYS N CA sing N N 106 CYS N H sing N N 107 CYS N H2 sing N N 108 CYS CA C sing N N 109 CYS CA CB sing N N 110 CYS CA HA sing N N 111 CYS C O doub N N 112 CYS C OXT sing N N 113 CYS CB SG sing N N 114 CYS CB HB2 sing N N 115 CYS CB HB3 sing N N 116 CYS SG HG sing N N 117 CYS OXT HXT sing N N 118 GLN N CA sing N N 119 GLN N H sing N N 120 GLN N H2 sing N N 121 GLN CA C sing N N 122 GLN CA CB sing N N 123 GLN CA HA sing N N 124 GLN C O doub N N 125 GLN C OXT sing N N 126 GLN CB CG sing N N 127 GLN CB HB2 sing N N 128 GLN CB HB3 sing N N 129 GLN CG CD sing N N 130 GLN CG HG2 sing N N 131 GLN CG HG3 sing N N 132 GLN CD OE1 doub N N 133 GLN CD NE2 sing N N 134 GLN NE2 HE21 sing N N 135 GLN NE2 HE22 sing N N 136 GLN OXT HXT sing N N 137 GLU N CA sing N N 138 GLU N H sing N N 139 GLU N H2 sing N N 140 GLU CA C sing N N 141 GLU CA CB sing N N 142 GLU CA HA sing N N 143 GLU C O doub N N 144 GLU C OXT sing N N 145 GLU CB CG sing N N 146 GLU CB HB2 sing N N 147 GLU CB HB3 sing N N 148 GLU CG CD sing N N 149 GLU CG HG2 sing N N 150 GLU CG HG3 sing N N 151 GLU CD OE1 doub N N 152 GLU CD OE2 sing N N 153 GLU OE2 HE2 sing N N 154 GLU OXT HXT sing N N 155 GLY N CA sing N N 156 GLY N H sing N N 157 GLY N H2 sing N N 158 GLY CA C sing N N 159 GLY CA HA2 sing N N 160 GLY CA HA3 sing N N 161 GLY C O doub N N 162 GLY C OXT sing N N 163 GLY OXT HXT sing N N 164 HIS N CA sing N N 165 HIS N H sing N N 166 HIS N H2 sing N N 167 HIS CA C sing N N 168 HIS CA CB sing N N 169 HIS CA HA sing N N 170 HIS C O doub N N 171 HIS C OXT sing N N 172 HIS CB CG sing N N 173 HIS CB HB2 sing N N 174 HIS CB HB3 sing N N 175 HIS CG ND1 sing Y N 176 HIS CG CD2 doub Y N 177 HIS ND1 CE1 doub Y N 178 HIS ND1 HD1 sing N N 179 HIS CD2 NE2 sing Y N 180 HIS CD2 HD2 sing N N 181 HIS CE1 NE2 sing Y N 182 HIS CE1 HE1 sing N N 183 HIS NE2 HE2 sing N N 184 HIS OXT HXT sing N N 185 HOH O H1 sing N N 186 HOH O H2 sing N N 187 ILE N CA sing N N 188 ILE N H sing N N 189 ILE N H2 sing N N 190 ILE CA C sing N N 191 ILE CA CB sing N N 192 ILE CA HA sing N N 193 ILE C O doub N N 194 ILE C OXT sing N N 195 ILE CB CG1 sing N N 196 ILE CB CG2 sing N N 197 ILE CB HB sing N N 198 ILE CG1 CD1 sing N N 199 ILE CG1 HG12 sing N N 200 ILE CG1 HG13 sing N N 201 ILE CG2 HG21 sing N N 202 ILE CG2 HG22 sing N N 203 ILE CG2 HG23 sing N N 204 ILE CD1 HD11 sing N N 205 ILE CD1 HD12 sing N N 206 ILE CD1 HD13 sing N N 207 ILE OXT HXT sing N N 208 LEU N CA sing N N 209 LEU N H sing N N 210 LEU N H2 sing N N 211 LEU CA C sing N N 212 LEU CA CB sing N N 213 LEU CA HA sing N N 214 LEU C O doub N N 215 LEU C OXT sing N N 216 LEU CB CG sing N N 217 LEU CB HB2 sing N N 218 LEU CB HB3 sing N N 219 LEU CG CD1 sing N N 220 LEU CG CD2 sing N N 221 LEU CG HG sing N N 222 LEU CD1 HD11 sing N N 223 LEU CD1 HD12 sing N N 224 LEU CD1 HD13 sing N N 225 LEU CD2 HD21 sing N N 226 LEU CD2 HD22 sing N N 227 LEU CD2 HD23 sing N N 228 LEU OXT HXT sing N N 229 LYS N CA sing N N 230 LYS N H sing N N 231 LYS N H2 sing N N 232 LYS CA C sing N N 233 LYS CA CB sing N N 234 LYS CA HA sing N N 235 LYS C O doub N N 236 LYS C OXT sing N N 237 LYS CB CG sing N N 238 LYS CB HB2 sing N N 239 LYS CB HB3 sing N N 240 LYS CG CD sing N N 241 LYS CG HG2 sing N N 242 LYS CG HG3 sing N N 243 LYS CD CE sing N N 244 LYS CD HD2 sing N N 245 LYS CD HD3 sing N N 246 LYS CE NZ sing N N 247 LYS CE HE2 sing N N 248 LYS CE HE3 sing N N 249 LYS NZ HZ1 sing N N 250 LYS NZ HZ2 sing N N 251 LYS NZ HZ3 sing N N 252 LYS OXT HXT sing N N 253 MET N CA sing N N 254 MET N H sing N N 255 MET N H2 sing N N 256 MET CA C sing N N 257 MET CA CB sing N N 258 MET CA HA sing N N 259 MET C O doub N N 260 MET C OXT sing N N 261 MET CB CG sing N N 262 MET CB HB2 sing N N 263 MET CB HB3 sing N N 264 MET CG SD sing N N 265 MET CG HG2 sing N N 266 MET CG HG3 sing N N 267 MET SD CE sing N N 268 MET CE HE1 sing N N 269 MET CE HE2 sing N N 270 MET CE HE3 sing N N 271 MET OXT HXT sing N N 272 PHE N CA sing N N 273 PHE N H sing N N 274 PHE N H2 sing N N 275 PHE CA C sing N N 276 PHE CA CB sing N N 277 PHE CA HA sing N N 278 PHE C O doub N N 279 PHE C OXT sing N N 280 PHE CB CG sing N N 281 PHE CB HB2 sing N N 282 PHE CB HB3 sing N N 283 PHE CG CD1 doub Y N 284 PHE CG CD2 sing Y N 285 PHE CD1 CE1 sing Y N 286 PHE CD1 HD1 sing N N 287 PHE CD2 CE2 doub Y N 288 PHE CD2 HD2 sing N N 289 PHE CE1 CZ doub Y N 290 PHE CE1 HE1 sing N N 291 PHE CE2 CZ sing Y N 292 PHE CE2 HE2 sing N N 293 PHE CZ HZ sing N N 294 PHE OXT HXT sing N N 295 PRO N CA sing N N 296 PRO N CD sing N N 297 PRO N H sing N N 298 PRO CA C sing N N 299 PRO CA CB sing N N 300 PRO CA HA sing N N 301 PRO C O doub N N 302 PRO C OXT sing N N 303 PRO CB CG sing N N 304 PRO CB HB2 sing N N 305 PRO CB HB3 sing N N 306 PRO CG CD sing N N 307 PRO CG HG2 sing N N 308 PRO CG HG3 sing N N 309 PRO CD HD2 sing N N 310 PRO CD HD3 sing N N 311 PRO OXT HXT sing N N 312 SER N CA sing N N 313 SER N H sing N N 314 SER N H2 sing N N 315 SER CA C sing N N 316 SER CA CB sing N N 317 SER CA HA sing N N 318 SER C O doub N N 319 SER C OXT sing N N 320 SER CB OG sing N N 321 SER CB HB2 sing N N 322 SER CB HB3 sing N N 323 SER OG HG sing N N 324 SER OXT HXT sing N N 325 THR N CA sing N N 326 THR N H sing N N 327 THR N H2 sing N N 328 THR CA C sing N N 329 THR CA CB sing N N 330 THR CA HA sing N N 331 THR C O doub N N 332 THR C OXT sing N N 333 THR CB OG1 sing N N 334 THR CB CG2 sing N N 335 THR CB HB sing N N 336 THR OG1 HG1 sing N N 337 THR CG2 HG21 sing N N 338 THR CG2 HG22 sing N N 339 THR CG2 HG23 sing N N 340 THR OXT HXT sing N N 341 TYR N CA sing N N 342 TYR N H sing N N 343 TYR N H2 sing N N 344 TYR CA C sing N N 345 TYR CA CB sing N N 346 TYR CA HA sing N N 347 TYR C O doub N N 348 TYR C OXT sing N N 349 TYR CB CG sing N N 350 TYR CB HB2 sing N N 351 TYR CB HB3 sing N N 352 TYR CG CD1 doub Y N 353 TYR CG CD2 sing Y N 354 TYR CD1 CE1 sing Y N 355 TYR CD1 HD1 sing N N 356 TYR CD2 CE2 doub Y N 357 TYR CD2 HD2 sing N N 358 TYR CE1 CZ doub Y N 359 TYR CE1 HE1 sing N N 360 TYR CE2 CZ sing Y N 361 TYR CE2 HE2 sing N N 362 TYR CZ OH sing N N 363 TYR OH HH sing N N 364 TYR OXT HXT sing N N 365 VAL N CA sing N N 366 VAL N H sing N N 367 VAL N H2 sing N N 368 VAL CA C sing N N 369 VAL CA CB sing N N 370 VAL CA HA sing N N 371 VAL C O doub N N 372 VAL C OXT sing N N 373 VAL CB CG1 sing N N 374 VAL CB CG2 sing N N 375 VAL CB HB sing N N 376 VAL CG1 HG11 sing N N 377 VAL CG1 HG12 sing N N 378 VAL CG1 HG13 sing N N 379 VAL CG2 HG21 sing N N 380 VAL CG2 HG22 sing N N 381 VAL CG2 HG23 sing N N 382 VAL OXT HXT sing N N 383 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "CYTIDINE-5'-MONOPHOSPHATE" C5P 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1R5D _pdbx_initial_refinement_model.details 'PDB ENTRY 1R5D' #