data_3DKP # _entry.id 3DKP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DKP pdb_00003dkp 10.2210/pdb3dkp/pdb RCSB RCSB048158 ? ? WWPDB D_1000048158 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DKP _pdbx_database_status.recvd_initial_deposition_date 2008-06-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lehtio, L.' 1 'Karlberg, T.' 2 'Andersson, J.' 3 'Arrowsmith, C.H.' 4 'Berglund, H.' 5 'Collins, R.' 6 'Dahlgren, L.G.' 7 'Edwards, A.M.' 8 'Flodin, S.' 9 'Flores, A.' 10 'Graslund, S.' 11 'Hammarstrom, M.' 12 'Johansson, A.' 13 'Johansson, I.' 14 'Kotenyova, T.' 15 'Moche, M.' 16 'Nilsson, M.E.' 17 'Nordlund, P.' 18 'Nyman, T.' 19 'Olesen, K.' 20 'Persson, C.' 21 'Sagemark, J.' 22 'Thorsell, A.G.' 23 'Tresaugues, L.' 24 'van den Berg, S.' 25 'Welin, M.' 26 'Wisniewska, M.' 27 'Wikstrom, M.' 28 'Schueler, H.' 29 'Structural Genomics Consortium (SGC)' 30 # _citation.id primary _citation.title 'Comparative Structural Analysis of Human DEAD-Box RNA Helicases.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 5 _citation.page_first 12791 _citation.page_last 12791 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20941364 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0012791 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schutz, P.' 1 ? primary 'Karlberg, T.' 2 ? primary 'van den Berg, S.' 3 ? primary 'Collins, R.' 4 ? primary 'Lehtio, L.' 5 ? primary 'Hogbom, M.' 6 ? primary 'Holmberg-Schiavone, L.' 7 ? primary 'Tempel, W.' 8 ? primary 'Park, H.W.' 9 ? primary 'Hammarstrom, M.' 10 ? primary 'Moche, M.' 11 ? primary 'Thorsell, A.G.' 12 ? primary 'Schuler, H.' 13 ? # _cell.entry_id 3DKP _cell.length_a 40.630 _cell.length_b 38.360 _cell.length_c 73.840 _cell.angle_alpha 90.00 _cell.angle_beta 90.37 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DKP _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable ATP-dependent RNA helicase DDX52' 27432.959 1 3.6.1.- ? 'Conserved domain I: Residues 139-381' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 2 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 168 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DEAD box protein 52, ATP-dependent RNA helicase ROK1-like' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKT LAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRL IYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSI GARNS ; _entity_poly.pdbx_seq_one_letter_code_can ;SMKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKT LAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRL IYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSI GARNS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 LYS n 1 4 ILE n 1 5 ASN n 1 6 PHE n 1 7 LEU n 1 8 ARG n 1 9 ASN n 1 10 LYS n 1 11 HIS n 1 12 LYS n 1 13 ILE n 1 14 HIS n 1 15 VAL n 1 16 GLN n 1 17 GLY n 1 18 THR n 1 19 ASP n 1 20 LEU n 1 21 PRO n 1 22 ASP n 1 23 PRO n 1 24 ILE n 1 25 ALA n 1 26 THR n 1 27 PHE n 1 28 GLN n 1 29 GLN n 1 30 LEU n 1 31 ASP n 1 32 GLN n 1 33 GLU n 1 34 TYR n 1 35 LYS n 1 36 ILE n 1 37 ASN n 1 38 SER n 1 39 ARG n 1 40 LEU n 1 41 LEU n 1 42 GLN n 1 43 ASN n 1 44 ILE n 1 45 LEU n 1 46 ASP n 1 47 ALA n 1 48 GLY n 1 49 PHE n 1 50 GLN n 1 51 MET n 1 52 PRO n 1 53 THR n 1 54 PRO n 1 55 ILE n 1 56 GLN n 1 57 MET n 1 58 GLN n 1 59 ALA n 1 60 ILE n 1 61 PRO n 1 62 VAL n 1 63 MET n 1 64 LEU n 1 65 HIS n 1 66 GLY n 1 67 ARG n 1 68 GLU n 1 69 LEU n 1 70 LEU n 1 71 ALA n 1 72 SER n 1 73 ALA n 1 74 PRO n 1 75 THR n 1 76 GLY n 1 77 SER n 1 78 GLY n 1 79 LYS n 1 80 THR n 1 81 LEU n 1 82 ALA n 1 83 PHE n 1 84 SER n 1 85 ILE n 1 86 PRO n 1 87 ILE n 1 88 LEU n 1 89 MET n 1 90 GLN n 1 91 LEU n 1 92 LYS n 1 93 GLN n 1 94 PRO n 1 95 ALA n 1 96 ASN n 1 97 LYS n 1 98 GLY n 1 99 PHE n 1 100 ARG n 1 101 ALA n 1 102 LEU n 1 103 ILE n 1 104 ILE n 1 105 SER n 1 106 PRO n 1 107 THR n 1 108 ARG n 1 109 GLU n 1 110 LEU n 1 111 ALA n 1 112 SER n 1 113 GLN n 1 114 ILE n 1 115 HIS n 1 116 ARG n 1 117 GLU n 1 118 LEU n 1 119 ILE n 1 120 LYS n 1 121 ILE n 1 122 SER n 1 123 GLU n 1 124 GLY n 1 125 THR n 1 126 GLY n 1 127 PHE n 1 128 ARG n 1 129 ILE n 1 130 HIS n 1 131 MET n 1 132 ILE n 1 133 HIS n 1 134 LYS n 1 135 ALA n 1 136 ALA n 1 137 VAL n 1 138 ALA n 1 139 ALA n 1 140 LYS n 1 141 LYS n 1 142 PHE n 1 143 GLY n 1 144 PRO n 1 145 LYS n 1 146 SER n 1 147 SER n 1 148 LYS n 1 149 LYS n 1 150 PHE n 1 151 ASP n 1 152 ILE n 1 153 LEU n 1 154 VAL n 1 155 THR n 1 156 THR n 1 157 PRO n 1 158 ASN n 1 159 ARG n 1 160 LEU n 1 161 ILE n 1 162 TYR n 1 163 LEU n 1 164 LEU n 1 165 LYS n 1 166 GLN n 1 167 ASP n 1 168 PRO n 1 169 PRO n 1 170 GLY n 1 171 ILE n 1 172 ASP n 1 173 LEU n 1 174 ALA n 1 175 SER n 1 176 VAL n 1 177 GLU n 1 178 TRP n 1 179 LEU n 1 180 VAL n 1 181 VAL n 1 182 ASP n 1 183 GLU n 1 184 SER n 1 185 ASP n 1 186 LYS n 1 187 LEU n 1 188 PHE n 1 189 GLU n 1 190 ASP n 1 191 GLY n 1 192 LYS n 1 193 THR n 1 194 GLY n 1 195 PHE n 1 196 ARG n 1 197 ASP n 1 198 GLN n 1 199 LEU n 1 200 ALA n 1 201 SER n 1 202 ILE n 1 203 PHE n 1 204 LEU n 1 205 ALA n 1 206 CYS n 1 207 THR n 1 208 SER n 1 209 HIS n 1 210 LYS n 1 211 VAL n 1 212 ARG n 1 213 ARG n 1 214 ALA n 1 215 MET n 1 216 PHE n 1 217 SER n 1 218 ALA n 1 219 THR n 1 220 PHE n 1 221 ALA n 1 222 TYR n 1 223 ASP n 1 224 VAL n 1 225 GLU n 1 226 GLN n 1 227 TRP n 1 228 CYS n 1 229 LYS n 1 230 LEU n 1 231 ASN n 1 232 LEU n 1 233 ASP n 1 234 ASN n 1 235 VAL n 1 236 ILE n 1 237 SER n 1 238 VAL n 1 239 SER n 1 240 ILE n 1 241 GLY n 1 242 ALA n 1 243 ARG n 1 244 ASN n 1 245 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DDX52, ROK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)GOLD pRARE2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DDX52_HUMAN _struct_ref.pdbx_db_accession Q9Y2R4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLA FSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIY LLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGA RNS ; _struct_ref.pdbx_align_begin 139 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DKP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 245 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9Y2R4 _struct_ref_seq.db_align_beg 139 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 381 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 139 _struct_ref_seq.pdbx_auth_seq_align_end 381 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DKP SER A 1 ? UNP Q9Y2R4 ? ? 'expression tag' 137 1 1 3DKP MET A 2 ? UNP Q9Y2R4 ? ? 'expression tag' 138 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3DKP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_percent_sol 41.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '10% PEG 8000, 100 mM Imidazole, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-04-22 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Silicon (111) channel-cut' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00000 # _reflns.entry_id 3DKP _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.10 _reflns.d_resolution_low 20.0 _reflns.number_all 13480 _reflns.number_obs 13480 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.80 _reflns.B_iso_Wilson_estimate 25.8 _reflns.pdbx_redundancy 3.65 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.20 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.378 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.61 _reflns_shell.pdbx_redundancy 3.68 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1731 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DKP _refine.ls_number_reflns_obs 12804 _refine.ls_number_reflns_all 12804 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.56 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 99.62 _refine.ls_R_factor_obs 0.18451 _refine.ls_R_factor_all 0.18451 _refine.ls_R_factor_R_work 0.18166 _refine.ls_R_factor_R_free 0.23636 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 674 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.908 _refine.B_iso_mean 9.348 _refine.aniso_B[1][1] 0.68 _refine.aniso_B[2][2] 0.13 _refine.aniso_B[3][3] -0.81 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.06 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 2DB3' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 'isotropic + TLS groups' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.269 _refine.pdbx_overall_ESU_R_Free 0.205 _refine.overall_SU_ML 0.138 _refine.overall_SU_B 11.364 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1868 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 168 _refine_hist.number_atoms_total 2079 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 19.56 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 1978 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.414 1.996 ? 2686 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.911 5.000 ? 248 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.382 23.766 ? 77 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.985 15.000 ? 353 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.803 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.097 0.200 ? 311 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1434 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.624 1.500 ? 1213 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.190 2.000 ? 1966 'X-RAY DIFFRACTION' ? r_scbond_it 1.976 3.000 ? 765 'X-RAY DIFFRACTION' ? r_scangle_it 3.258 4.500 ? 715 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.154 _refine_ls_shell.number_reflns_R_work 939 _refine_ls_shell.R_factor_R_work 0.219 _refine_ls_shell.percent_reflns_obs 99.60 _refine_ls_shell.R_factor_R_free 0.254 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DKP _struct.title 'Human DEAD-box RNA-helicase DDX52, conserved domain I in complex with ADP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DKP _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;RNA HELICASE, DEAD, ADP, Structural Genomics, Structural Genomics Consortium, SGC, rRNA, ATP-binding, Hydrolase, Nucleotide-binding, Nucleus, Phosphoprotein, RNA-binding ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 1 ? HIS A 11 ? SER A 137 HIS A 147 1 ? 11 HELX_P HELX_P2 2 THR A 26 ? LYS A 35 ? THR A 162 LYS A 171 1 ? 10 HELX_P HELX_P3 3 ASN A 37 ? ALA A 47 ? ASN A 173 ALA A 183 1 ? 11 HELX_P HELX_P4 4 THR A 53 ? HIS A 65 ? THR A 189 HIS A 201 1 ? 13 HELX_P HELX_P5 5 GLY A 78 ? LYS A 92 ? GLY A 214 LYS A 228 1 ? 15 HELX_P HELX_P6 6 THR A 107 ? SER A 122 ? THR A 243 SER A 258 1 ? 16 HELX_P HELX_P7 7 HIS A 133 ? LYS A 140 ? HIS A 269 LYS A 276 1 ? 8 HELX_P HELX_P8 8 THR A 156 ? GLN A 166 ? THR A 292 GLN A 302 1 ? 11 HELX_P HELX_P9 9 GLU A 183 ? GLY A 191 ? GLU A 319 GLY A 327 1 ? 9 HELX_P HELX_P10 10 GLY A 194 ? CYS A 206 ? GLY A 330 CYS A 342 1 ? 13 HELX_P HELX_P11 11 ALA A 221 ? LEU A 232 ? ALA A 357 LEU A 368 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B MG . MG ? ? ? 1_555 C ADP . O1B ? ? A MG 401 A ADP 402 1_555 ? ? ? ? ? ? ? 1.986 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 401 A HOH 422 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 401 A HOH 561 1_555 ? ? ? ? ? ? ? 2.210 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 401 A HOH 562 1_555 ? ? ? ? ? ? ? 1.973 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 401 A HOH 563 1_555 ? ? ? ? ? ? ? 2.087 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 401 A HOH 564 1_555 ? ? ? ? ? ? ? 1.953 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 167 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 303 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 168 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 304 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.37 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 13 ? GLN A 16 ? ILE A 149 GLN A 152 A 2 ILE A 236 ? ILE A 240 ? ILE A 372 ILE A 376 A 3 LEU A 69 ? SER A 72 ? LEU A 205 SER A 208 A 4 ARG A 212 ? SER A 217 ? ARG A 348 SER A 353 A 5 TRP A 178 ? VAL A 181 ? TRP A 314 VAL A 317 A 6 ALA A 101 ? ILE A 104 ? ALA A 237 ILE A 240 A 7 ILE A 152 ? THR A 155 ? ILE A 288 THR A 291 A 8 ILE A 129 ? HIS A 130 ? ILE A 265 HIS A 266 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 14 ? N HIS A 150 O SER A 239 ? O SER A 375 A 2 3 O VAL A 238 ? O VAL A 374 N LEU A 70 ? N LEU A 206 A 3 4 N LEU A 69 ? N LEU A 205 O MET A 215 ? O MET A 351 A 4 5 O PHE A 216 ? O PHE A 352 N VAL A 181 ? N VAL A 317 A 5 6 O VAL A 180 ? O VAL A 316 N ILE A 104 ? N ILE A 240 A 6 7 N ILE A 103 ? N ILE A 239 O LEU A 153 ? O LEU A 289 A 7 8 O VAL A 154 ? O VAL A 290 N HIS A 130 ? N HIS A 266 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 401 ? 5 'BINDING SITE FOR RESIDUE MG A 401' AC2 Software A ADP 402 ? 17 'BINDING SITE FOR RESIDUE ADP A 402' AC3 Software A ADP 403 ? 6 'BINDING SITE FOR RESIDUE ADP A 403' AC4 Software A GOL 404 ? 5 'BINDING SITE FOR RESIDUE GOL A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HOH F . ? HOH A 422 . ? 1_555 ? 2 AC1 5 HOH F . ? HOH A 561 . ? 1_555 ? 3 AC1 5 HOH F . ? HOH A 562 . ? 1_555 ? 4 AC1 5 HOH F . ? HOH A 563 . ? 1_555 ? 5 AC1 5 HOH F . ? HOH A 564 . ? 1_555 ? 6 AC2 17 PHE A 49 ? PHE A 185 . ? 1_555 ? 7 AC2 17 MET A 51 ? MET A 187 . ? 1_555 ? 8 AC2 17 GLN A 56 ? GLN A 192 . ? 1_555 ? 9 AC2 17 PRO A 74 ? PRO A 210 . ? 1_555 ? 10 AC2 17 THR A 75 ? THR A 211 . ? 1_555 ? 11 AC2 17 GLY A 76 ? GLY A 212 . ? 1_555 ? 12 AC2 17 SER A 77 ? SER A 213 . ? 1_555 ? 13 AC2 17 GLY A 78 ? GLY A 214 . ? 1_555 ? 14 AC2 17 LYS A 79 ? LYS A 215 . ? 1_555 ? 15 AC2 17 THR A 80 ? THR A 216 . ? 1_555 ? 16 AC2 17 HOH F . ? HOH A 416 . ? 1_555 ? 17 AC2 17 HOH F . ? HOH A 421 . ? 1_555 ? 18 AC2 17 HOH F . ? HOH A 435 . ? 1_555 ? 19 AC2 17 HOH F . ? HOH A 534 . ? 1_555 ? 20 AC2 17 HOH F . ? HOH A 562 . ? 1_555 ? 21 AC2 17 HOH F . ? HOH A 563 . ? 1_555 ? 22 AC2 17 HOH F . ? HOH A 564 . ? 1_555 ? 23 AC3 6 ARG A 108 ? ARG A 244 . ? 1_555 ? 24 AC3 6 HIS A 133 ? HIS A 269 . ? 1_555 ? 25 AC3 6 LYS A 134 ? LYS A 270 . ? 1_555 ? 26 AC3 6 ARG A 159 ? ARG A 295 . ? 1_555 ? 27 AC3 6 TYR A 222 ? TYR A 358 . ? 1_655 ? 28 AC3 6 HOH F . ? HOH A 493 . ? 1_555 ? 29 AC4 5 THR A 53 ? THR A 189 . ? 1_555 ? 30 AC4 5 PRO A 54 ? PRO A 190 . ? 1_555 ? 31 AC4 5 GLY A 76 ? GLY A 212 . ? 1_555 ? 32 AC4 5 SER A 77 ? SER A 213 . ? 1_555 ? 33 AC4 5 HIS A 209 ? HIS A 345 . ? 1_545 ? # _database_PDB_matrix.entry_id 3DKP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DKP _atom_sites.fract_transf_matrix[1][1] 0.024612 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000160 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026069 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013543 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 137 137 SER SER A . n A 1 2 MET 2 138 138 MET MET A . n A 1 3 LYS 3 139 139 LYS LYS A . n A 1 4 ILE 4 140 140 ILE ILE A . n A 1 5 ASN 5 141 141 ASN ASN A . n A 1 6 PHE 6 142 142 PHE PHE A . n A 1 7 LEU 7 143 143 LEU LEU A . n A 1 8 ARG 8 144 144 ARG ARG A . n A 1 9 ASN 9 145 145 ASN ASN A . n A 1 10 LYS 10 146 146 LYS LYS A . n A 1 11 HIS 11 147 147 HIS HIS A . n A 1 12 LYS 12 148 148 LYS LYS A . n A 1 13 ILE 13 149 149 ILE ILE A . n A 1 14 HIS 14 150 150 HIS HIS A . n A 1 15 VAL 15 151 151 VAL VAL A . n A 1 16 GLN 16 152 152 GLN GLN A . n A 1 17 GLY 17 153 153 GLY GLY A . n A 1 18 THR 18 154 154 THR THR A . n A 1 19 ASP 19 155 155 ASP ASP A . n A 1 20 LEU 20 156 156 LEU LEU A . n A 1 21 PRO 21 157 157 PRO PRO A . n A 1 22 ASP 22 158 158 ASP ASP A . n A 1 23 PRO 23 159 159 PRO PRO A . n A 1 24 ILE 24 160 160 ILE ILE A . n A 1 25 ALA 25 161 161 ALA ALA A . n A 1 26 THR 26 162 162 THR THR A . n A 1 27 PHE 27 163 163 PHE PHE A . n A 1 28 GLN 28 164 164 GLN GLN A . n A 1 29 GLN 29 165 165 GLN GLN A . n A 1 30 LEU 30 166 166 LEU LEU A . n A 1 31 ASP 31 167 167 ASP ASP A . n A 1 32 GLN 32 168 168 GLN GLN A . n A 1 33 GLU 33 169 169 GLU GLU A . n A 1 34 TYR 34 170 170 TYR TYR A . n A 1 35 LYS 35 171 171 LYS LYS A . n A 1 36 ILE 36 172 172 ILE ILE A . n A 1 37 ASN 37 173 173 ASN ASN A . n A 1 38 SER 38 174 174 SER SER A . n A 1 39 ARG 39 175 175 ARG ARG A . n A 1 40 LEU 40 176 176 LEU LEU A . n A 1 41 LEU 41 177 177 LEU LEU A . n A 1 42 GLN 42 178 178 GLN GLN A . n A 1 43 ASN 43 179 179 ASN ASN A . n A 1 44 ILE 44 180 180 ILE ILE A . n A 1 45 LEU 45 181 181 LEU LEU A . n A 1 46 ASP 46 182 182 ASP ASP A . n A 1 47 ALA 47 183 183 ALA ALA A . n A 1 48 GLY 48 184 184 GLY GLY A . n A 1 49 PHE 49 185 185 PHE PHE A . n A 1 50 GLN 50 186 186 GLN GLN A . n A 1 51 MET 51 187 187 MET MET A . n A 1 52 PRO 52 188 188 PRO PRO A . n A 1 53 THR 53 189 189 THR THR A . n A 1 54 PRO 54 190 190 PRO PRO A . n A 1 55 ILE 55 191 191 ILE ILE A . n A 1 56 GLN 56 192 192 GLN GLN A . n A 1 57 MET 57 193 193 MET MET A . n A 1 58 GLN 58 194 194 GLN GLN A . n A 1 59 ALA 59 195 195 ALA ALA A . n A 1 60 ILE 60 196 196 ILE ILE A . n A 1 61 PRO 61 197 197 PRO PRO A . n A 1 62 VAL 62 198 198 VAL VAL A . n A 1 63 MET 63 199 199 MET MET A . n A 1 64 LEU 64 200 200 LEU LEU A . n A 1 65 HIS 65 201 201 HIS HIS A . n A 1 66 GLY 66 202 202 GLY GLY A . n A 1 67 ARG 67 203 203 ARG ARG A . n A 1 68 GLU 68 204 204 GLU GLU A . n A 1 69 LEU 69 205 205 LEU LEU A . n A 1 70 LEU 70 206 206 LEU LEU A . n A 1 71 ALA 71 207 207 ALA ALA A . n A 1 72 SER 72 208 208 SER SER A . n A 1 73 ALA 73 209 209 ALA ALA A . n A 1 74 PRO 74 210 210 PRO PRO A . n A 1 75 THR 75 211 211 THR THR A . n A 1 76 GLY 76 212 212 GLY GLY A . n A 1 77 SER 77 213 213 SER SER A . n A 1 78 GLY 78 214 214 GLY GLY A . n A 1 79 LYS 79 215 215 LYS LYS A . n A 1 80 THR 80 216 216 THR THR A . n A 1 81 LEU 81 217 217 LEU LEU A . n A 1 82 ALA 82 218 218 ALA ALA A . n A 1 83 PHE 83 219 219 PHE PHE A . n A 1 84 SER 84 220 220 SER SER A . n A 1 85 ILE 85 221 221 ILE ILE A . n A 1 86 PRO 86 222 222 PRO PRO A . n A 1 87 ILE 87 223 223 ILE ILE A . n A 1 88 LEU 88 224 224 LEU LEU A . n A 1 89 MET 89 225 225 MET MET A . n A 1 90 GLN 90 226 226 GLN GLN A . n A 1 91 LEU 91 227 227 LEU LEU A . n A 1 92 LYS 92 228 228 LYS LYS A . n A 1 93 GLN 93 229 229 GLN GLN A . n A 1 94 PRO 94 230 230 PRO PRO A . n A 1 95 ALA 95 231 231 ALA ALA A . n A 1 96 ASN 96 232 232 ASN ASN A . n A 1 97 LYS 97 233 233 LYS LYS A . n A 1 98 GLY 98 234 234 GLY GLY A . n A 1 99 PHE 99 235 235 PHE PHE A . n A 1 100 ARG 100 236 236 ARG ARG A . n A 1 101 ALA 101 237 237 ALA ALA A . n A 1 102 LEU 102 238 238 LEU LEU A . n A 1 103 ILE 103 239 239 ILE ILE A . n A 1 104 ILE 104 240 240 ILE ILE A . n A 1 105 SER 105 241 241 SER SER A . n A 1 106 PRO 106 242 242 PRO PRO A . n A 1 107 THR 107 243 243 THR THR A . n A 1 108 ARG 108 244 244 ARG ARG A . n A 1 109 GLU 109 245 245 GLU GLU A . n A 1 110 LEU 110 246 246 LEU LEU A . n A 1 111 ALA 111 247 247 ALA ALA A . n A 1 112 SER 112 248 248 SER SER A . n A 1 113 GLN 113 249 249 GLN GLN A . n A 1 114 ILE 114 250 250 ILE ILE A . n A 1 115 HIS 115 251 251 HIS HIS A . n A 1 116 ARG 116 252 252 ARG ARG A . n A 1 117 GLU 117 253 253 GLU GLU A . n A 1 118 LEU 118 254 254 LEU LEU A . n A 1 119 ILE 119 255 255 ILE ILE A . n A 1 120 LYS 120 256 256 LYS LYS A . n A 1 121 ILE 121 257 257 ILE ILE A . n A 1 122 SER 122 258 258 SER SER A . n A 1 123 GLU 123 259 259 GLU GLU A . n A 1 124 GLY 124 260 260 GLY GLY A . n A 1 125 THR 125 261 261 THR THR A . n A 1 126 GLY 126 262 262 GLY GLY A . n A 1 127 PHE 127 263 263 PHE PHE A . n A 1 128 ARG 128 264 264 ARG ARG A . n A 1 129 ILE 129 265 265 ILE ILE A . n A 1 130 HIS 130 266 266 HIS HIS A . n A 1 131 MET 131 267 267 MET MET A . n A 1 132 ILE 132 268 268 ILE ILE A . n A 1 133 HIS 133 269 269 HIS HIS A . n A 1 134 LYS 134 270 270 LYS LYS A . n A 1 135 ALA 135 271 271 ALA ALA A . n A 1 136 ALA 136 272 272 ALA ALA A . n A 1 137 VAL 137 273 273 VAL VAL A . n A 1 138 ALA 138 274 274 ALA ALA A . n A 1 139 ALA 139 275 275 ALA ALA A . n A 1 140 LYS 140 276 276 LYS LYS A . n A 1 141 LYS 141 277 277 LYS LYS A . n A 1 142 PHE 142 278 278 PHE PHE A . n A 1 143 GLY 143 279 279 GLY GLY A . n A 1 144 PRO 144 280 280 PRO PRO A . n A 1 145 LYS 145 281 281 LYS LYS A . n A 1 146 SER 146 282 282 SER SER A . n A 1 147 SER 147 283 283 SER SER A . n A 1 148 LYS 148 284 284 LYS LYS A . n A 1 149 LYS 149 285 285 LYS LYS A . n A 1 150 PHE 150 286 286 PHE PHE A . n A 1 151 ASP 151 287 287 ASP ASP A . n A 1 152 ILE 152 288 288 ILE ILE A . n A 1 153 LEU 153 289 289 LEU LEU A . n A 1 154 VAL 154 290 290 VAL VAL A . n A 1 155 THR 155 291 291 THR THR A . n A 1 156 THR 156 292 292 THR THR A . n A 1 157 PRO 157 293 293 PRO PRO A . n A 1 158 ASN 158 294 294 ASN ASN A . n A 1 159 ARG 159 295 295 ARG ARG A . n A 1 160 LEU 160 296 296 LEU LEU A . n A 1 161 ILE 161 297 297 ILE ILE A . n A 1 162 TYR 162 298 298 TYR TYR A . n A 1 163 LEU 163 299 299 LEU LEU A . n A 1 164 LEU 164 300 300 LEU LEU A . n A 1 165 LYS 165 301 301 LYS LYS A . n A 1 166 GLN 166 302 302 GLN GLN A . n A 1 167 ASP 167 303 303 ASP ASP A . n A 1 168 PRO 168 304 304 PRO PRO A . n A 1 169 PRO 169 305 305 PRO PRO A . n A 1 170 GLY 170 306 306 GLY GLY A . n A 1 171 ILE 171 307 307 ILE ILE A . n A 1 172 ASP 172 308 308 ASP ASP A . n A 1 173 LEU 173 309 309 LEU LEU A . n A 1 174 ALA 174 310 310 ALA ALA A . n A 1 175 SER 175 311 311 SER SER A . n A 1 176 VAL 176 312 312 VAL VAL A . n A 1 177 GLU 177 313 313 GLU GLU A . n A 1 178 TRP 178 314 314 TRP TRP A . n A 1 179 LEU 179 315 315 LEU LEU A . n A 1 180 VAL 180 316 316 VAL VAL A . n A 1 181 VAL 181 317 317 VAL VAL A . n A 1 182 ASP 182 318 318 ASP ASP A . n A 1 183 GLU 183 319 319 GLU GLU A . n A 1 184 SER 184 320 320 SER SER A . n A 1 185 ASP 185 321 321 ASP ASP A . n A 1 186 LYS 186 322 322 LYS LYS A . n A 1 187 LEU 187 323 323 LEU LEU A . n A 1 188 PHE 188 324 324 PHE PHE A . n A 1 189 GLU 189 325 325 GLU GLU A . n A 1 190 ASP 190 326 326 ASP ASP A . n A 1 191 GLY 191 327 327 GLY GLY A . n A 1 192 LYS 192 328 ? ? ? A . n A 1 193 THR 193 329 ? ? ? A . n A 1 194 GLY 194 330 330 GLY GLY A . n A 1 195 PHE 195 331 331 PHE PHE A . n A 1 196 ARG 196 332 332 ARG ARG A . n A 1 197 ASP 197 333 333 ASP ASP A . n A 1 198 GLN 198 334 334 GLN GLN A . n A 1 199 LEU 199 335 335 LEU LEU A . n A 1 200 ALA 200 336 336 ALA ALA A . n A 1 201 SER 201 337 337 SER SER A . n A 1 202 ILE 202 338 338 ILE ILE A . n A 1 203 PHE 203 339 339 PHE PHE A . n A 1 204 LEU 204 340 340 LEU LEU A . n A 1 205 ALA 205 341 341 ALA ALA A . n A 1 206 CYS 206 342 342 CYS CYS A . n A 1 207 THR 207 343 343 THR THR A . n A 1 208 SER 208 344 344 SER SER A . n A 1 209 HIS 209 345 345 HIS HIS A . n A 1 210 LYS 210 346 346 LYS LYS A . n A 1 211 VAL 211 347 347 VAL VAL A . n A 1 212 ARG 212 348 348 ARG ARG A . n A 1 213 ARG 213 349 349 ARG ARG A . n A 1 214 ALA 214 350 350 ALA ALA A . n A 1 215 MET 215 351 351 MET MET A . n A 1 216 PHE 216 352 352 PHE PHE A . n A 1 217 SER 217 353 353 SER SER A . n A 1 218 ALA 218 354 354 ALA ALA A . n A 1 219 THR 219 355 355 THR THR A . n A 1 220 PHE 220 356 356 PHE PHE A . n A 1 221 ALA 221 357 357 ALA ALA A . n A 1 222 TYR 222 358 358 TYR TYR A . n A 1 223 ASP 223 359 359 ASP ASP A . n A 1 224 VAL 224 360 360 VAL VAL A . n A 1 225 GLU 225 361 361 GLU GLU A . n A 1 226 GLN 226 362 362 GLN GLN A . n A 1 227 TRP 227 363 363 TRP TRP A . n A 1 228 CYS 228 364 364 CYS CYS A . n A 1 229 LYS 229 365 365 LYS LYS A . n A 1 230 LEU 230 366 366 LEU LEU A . n A 1 231 ASN 231 367 367 ASN ASN A . n A 1 232 LEU 232 368 368 LEU LEU A . n A 1 233 ASP 233 369 369 ASP ASP A . n A 1 234 ASN 234 370 370 ASN ASN A . n A 1 235 VAL 235 371 371 VAL VAL A . n A 1 236 ILE 236 372 372 ILE ILE A . n A 1 237 SER 237 373 373 SER SER A . n A 1 238 VAL 238 374 374 VAL VAL A . n A 1 239 SER 239 375 375 SER SER A . n A 1 240 ILE 240 376 376 ILE ILE A . n A 1 241 GLY 241 377 377 GLY GLY A . n A 1 242 ALA 242 378 378 ALA ALA A . n A 1 243 ARG 243 379 ? ? ? A . n A 1 244 ASN 244 380 ? ? ? A . n A 1 245 SER 245 381 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 401 1 MG MG A . C 3 ADP 1 402 1 ADP ADP A . D 3 ADP 1 403 2 ADP ADP A . E 4 GOL 1 404 1 GOL GOL A . F 5 HOH 1 405 1 HOH HOH A . F 5 HOH 2 406 2 HOH HOH A . F 5 HOH 3 407 3 HOH HOH A . F 5 HOH 4 408 4 HOH HOH A . F 5 HOH 5 409 5 HOH HOH A . F 5 HOH 6 410 6 HOH HOH A . F 5 HOH 7 411 7 HOH HOH A . F 5 HOH 8 412 8 HOH HOH A . F 5 HOH 9 413 9 HOH HOH A . F 5 HOH 10 414 10 HOH HOH A . F 5 HOH 11 415 11 HOH HOH A . F 5 HOH 12 416 12 HOH HOH A . F 5 HOH 13 417 13 HOH HOH A . F 5 HOH 14 418 14 HOH HOH A . F 5 HOH 15 419 15 HOH HOH A . F 5 HOH 16 420 16 HOH HOH A . F 5 HOH 17 421 17 HOH HOH A . F 5 HOH 18 422 18 HOH HOH A . F 5 HOH 19 423 19 HOH HOH A . F 5 HOH 20 424 20 HOH HOH A . F 5 HOH 21 425 21 HOH HOH A . F 5 HOH 22 426 22 HOH HOH A . F 5 HOH 23 427 23 HOH HOH A . F 5 HOH 24 428 24 HOH HOH A . F 5 HOH 25 429 25 HOH HOH A . F 5 HOH 26 430 26 HOH HOH A . F 5 HOH 27 431 27 HOH HOH A . F 5 HOH 28 432 28 HOH HOH A . F 5 HOH 29 433 29 HOH HOH A . F 5 HOH 30 434 30 HOH HOH A . F 5 HOH 31 435 31 HOH HOH A . F 5 HOH 32 436 32 HOH HOH A . F 5 HOH 33 437 33 HOH HOH A . F 5 HOH 34 438 34 HOH HOH A . F 5 HOH 35 439 35 HOH HOH A . F 5 HOH 36 440 36 HOH HOH A . F 5 HOH 37 441 37 HOH HOH A . F 5 HOH 38 442 38 HOH HOH A . F 5 HOH 39 443 39 HOH HOH A . F 5 HOH 40 444 40 HOH HOH A . F 5 HOH 41 445 41 HOH HOH A . F 5 HOH 42 446 42 HOH HOH A . F 5 HOH 43 447 43 HOH HOH A . F 5 HOH 44 448 44 HOH HOH A . F 5 HOH 45 449 45 HOH HOH A . F 5 HOH 46 450 46 HOH HOH A . F 5 HOH 47 451 47 HOH HOH A . F 5 HOH 48 452 48 HOH HOH A . F 5 HOH 49 453 49 HOH HOH A . F 5 HOH 50 454 50 HOH HOH A . F 5 HOH 51 455 51 HOH HOH A . F 5 HOH 52 456 52 HOH HOH A . F 5 HOH 53 457 53 HOH HOH A . F 5 HOH 54 458 54 HOH HOH A . F 5 HOH 55 459 55 HOH HOH A . F 5 HOH 56 460 56 HOH HOH A . F 5 HOH 57 461 57 HOH HOH A . F 5 HOH 58 462 58 HOH HOH A . F 5 HOH 59 463 59 HOH HOH A . F 5 HOH 60 464 60 HOH HOH A . F 5 HOH 61 465 61 HOH HOH A . F 5 HOH 62 466 62 HOH HOH A . F 5 HOH 63 467 63 HOH HOH A . F 5 HOH 64 468 64 HOH HOH A . F 5 HOH 65 469 65 HOH HOH A . F 5 HOH 66 470 66 HOH HOH A . F 5 HOH 67 471 67 HOH HOH A . F 5 HOH 68 472 68 HOH HOH A . F 5 HOH 69 473 69 HOH HOH A . F 5 HOH 70 474 70 HOH HOH A . F 5 HOH 71 475 71 HOH HOH A . F 5 HOH 72 476 72 HOH HOH A . F 5 HOH 73 477 73 HOH HOH A . F 5 HOH 74 478 74 HOH HOH A . F 5 HOH 75 479 75 HOH HOH A . F 5 HOH 76 480 76 HOH HOH A . F 5 HOH 77 481 77 HOH HOH A . F 5 HOH 78 482 78 HOH HOH A . F 5 HOH 79 483 79 HOH HOH A . F 5 HOH 80 484 80 HOH HOH A . F 5 HOH 81 485 81 HOH HOH A . F 5 HOH 82 486 82 HOH HOH A . F 5 HOH 83 487 83 HOH HOH A . F 5 HOH 84 488 84 HOH HOH A . F 5 HOH 85 489 85 HOH HOH A . F 5 HOH 86 490 86 HOH HOH A . F 5 HOH 87 491 87 HOH HOH A . F 5 HOH 88 492 88 HOH HOH A . F 5 HOH 89 493 89 HOH HOH A . F 5 HOH 90 494 90 HOH HOH A . F 5 HOH 91 495 91 HOH HOH A . F 5 HOH 92 496 92 HOH HOH A . F 5 HOH 93 497 93 HOH HOH A . F 5 HOH 94 498 94 HOH HOH A . F 5 HOH 95 499 95 HOH HOH A . F 5 HOH 96 500 96 HOH HOH A . F 5 HOH 97 501 97 HOH HOH A . F 5 HOH 98 502 98 HOH HOH A . F 5 HOH 99 503 99 HOH HOH A . F 5 HOH 100 504 100 HOH HOH A . F 5 HOH 101 505 101 HOH HOH A . F 5 HOH 102 506 102 HOH HOH A . F 5 HOH 103 507 103 HOH HOH A . F 5 HOH 104 508 104 HOH HOH A . F 5 HOH 105 509 105 HOH HOH A . F 5 HOH 106 510 106 HOH HOH A . F 5 HOH 107 511 107 HOH HOH A . F 5 HOH 108 512 108 HOH HOH A . F 5 HOH 109 513 109 HOH HOH A . F 5 HOH 110 514 110 HOH HOH A . F 5 HOH 111 515 111 HOH HOH A . F 5 HOH 112 516 112 HOH HOH A . F 5 HOH 113 517 113 HOH HOH A . F 5 HOH 114 518 114 HOH HOH A . F 5 HOH 115 519 115 HOH HOH A . F 5 HOH 116 520 116 HOH HOH A . F 5 HOH 117 521 117 HOH HOH A . F 5 HOH 118 522 118 HOH HOH A . F 5 HOH 119 523 119 HOH HOH A . F 5 HOH 120 524 120 HOH HOH A . F 5 HOH 121 525 121 HOH HOH A . F 5 HOH 122 526 122 HOH HOH A . F 5 HOH 123 527 123 HOH HOH A . F 5 HOH 124 528 124 HOH HOH A . F 5 HOH 125 529 125 HOH HOH A . F 5 HOH 126 530 126 HOH HOH A . F 5 HOH 127 531 127 HOH HOH A . F 5 HOH 128 532 128 HOH HOH A . F 5 HOH 129 533 129 HOH HOH A . F 5 HOH 130 534 130 HOH HOH A . F 5 HOH 131 535 131 HOH HOH A . F 5 HOH 132 536 132 HOH HOH A . F 5 HOH 133 537 133 HOH HOH A . F 5 HOH 134 538 134 HOH HOH A . F 5 HOH 135 539 135 HOH HOH A . F 5 HOH 136 540 136 HOH HOH A . F 5 HOH 137 541 137 HOH HOH A . F 5 HOH 138 542 138 HOH HOH A . F 5 HOH 139 543 139 HOH HOH A . F 5 HOH 140 544 140 HOH HOH A . F 5 HOH 141 545 141 HOH HOH A . F 5 HOH 142 546 142 HOH HOH A . F 5 HOH 143 547 143 HOH HOH A . F 5 HOH 144 548 144 HOH HOH A . F 5 HOH 145 549 145 HOH HOH A . F 5 HOH 146 550 146 HOH HOH A . F 5 HOH 147 551 147 HOH HOH A . F 5 HOH 148 552 148 HOH HOH A . F 5 HOH 149 553 149 HOH HOH A . F 5 HOH 150 554 150 HOH HOH A . F 5 HOH 151 555 151 HOH HOH A . F 5 HOH 152 556 152 HOH HOH A . F 5 HOH 153 557 153 HOH HOH A . F 5 HOH 154 558 154 HOH HOH A . F 5 HOH 155 559 155 HOH HOH A . F 5 HOH 156 560 156 HOH HOH A . F 5 HOH 157 561 157 HOH HOH A . F 5 HOH 158 562 158 HOH HOH A . F 5 HOH 159 563 159 HOH HOH A . F 5 HOH 160 564 160 HOH HOH A . F 5 HOH 161 565 161 HOH HOH A . F 5 HOH 162 566 162 HOH HOH A . F 5 HOH 163 567 163 HOH HOH A . F 5 HOH 164 568 164 HOH HOH A . F 5 HOH 165 569 165 HOH HOH A . F 5 HOH 166 570 166 HOH HOH A . F 5 HOH 167 571 167 HOH HOH A . F 5 HOH 168 572 168 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O1B ? C ADP . ? A ADP 402 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 422 ? 1_555 173.0 ? 2 O1B ? C ADP . ? A ADP 402 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 561 ? 1_555 99.5 ? 3 O ? F HOH . ? A HOH 422 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 561 ? 1_555 85.2 ? 4 O1B ? C ADP . ? A ADP 402 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 562 ? 1_555 90.4 ? 5 O ? F HOH . ? A HOH 422 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 562 ? 1_555 85.1 ? 6 O ? F HOH . ? A HOH 561 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 562 ? 1_555 81.5 ? 7 O1B ? C ADP . ? A ADP 402 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 563 ? 1_555 93.8 ? 8 O ? F HOH . ? A HOH 422 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 563 ? 1_555 90.9 ? 9 O ? F HOH . ? A HOH 561 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 563 ? 1_555 95.8 ? 10 O ? F HOH . ? A HOH 562 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 563 ? 1_555 175.3 ? 11 O1B ? C ADP . ? A ADP 402 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 564 ? 1_555 93.2 ? 12 O ? F HOH . ? A HOH 422 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 564 ? 1_555 81.6 ? 13 O ? F HOH . ? A HOH 561 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 564 ? 1_555 165.3 ? 14 O ? F HOH . ? A HOH 562 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 564 ? 1_555 90.9 ? 15 O ? F HOH . ? A HOH 563 ? 1_555 MG ? B MG . ? A MG 401 ? 1_555 O ? F HOH . ? A HOH 564 ? 1_555 90.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-08-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.value' 6 3 'Structure model' '_struct_conn.pdbx_dist_value' 7 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 8 3 'Structure model' '_struct_ref_seq_dif.details' 9 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 10 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 11 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 4.4545 -2.1839 3.1626 0.1113 0.1212 0.0899 0.0275 -0.0390 0.0144 1.8483 2.3800 1.9701 0.5977 0.2979 1.3206 -0.0687 0.3463 -0.0432 -0.1949 0.0310 0.2173 0.0895 -0.0747 0.0378 'X-RAY DIFFRACTION' 2 ? refined 16.6361 3.8485 17.5816 0.1025 0.1308 0.1006 0.0565 0.0012 -0.0009 1.5687 1.9152 1.7262 0.7850 0.4511 0.7087 -0.0145 0.0120 -0.0244 0.0814 0.0693 -0.1329 0.1158 0.2710 -0.0548 'X-RAY DIFFRACTION' 3 ? refined 5.5431 8.3133 24.5469 0.0955 0.1008 0.1222 0.0393 0.0604 -0.0299 1.8731 2.4194 2.5883 0.4758 0.8787 0.6311 -0.0175 -0.2318 0.1231 0.2528 -0.1035 0.3348 0.0638 -0.1950 0.1210 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 137 A 1 A 179 A 43 ? 'X-RAY DIFFRACTION' ? 2 2 A 180 A 44 A 298 A 162 ? 'X-RAY DIFFRACTION' ? 3 3 A 299 A 163 A 378 A 242 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0077 ? 1 MxCuBE 'data collection' . ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 MOLREP phasing . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 228 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 67.38 _pdbx_validate_torsion.psi -58.16 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 186 ? CD ? A GLN 50 CD 2 1 Y 1 A GLN 186 ? OE1 ? A GLN 50 OE1 3 1 Y 1 A GLN 186 ? NE2 ? A GLN 50 NE2 4 1 Y 1 A ASN 232 ? CG ? A ASN 96 CG 5 1 Y 1 A ASN 232 ? OD1 ? A ASN 96 OD1 6 1 Y 1 A ASN 232 ? ND2 ? A ASN 96 ND2 7 1 Y 1 A LYS 233 ? CE ? A LYS 97 CE 8 1 Y 1 A LYS 233 ? NZ ? A LYS 97 NZ 9 1 Y 1 A LYS 281 ? CG ? A LYS 145 CG 10 1 Y 1 A LYS 281 ? CD ? A LYS 145 CD 11 1 Y 1 A LYS 281 ? CE ? A LYS 145 CE 12 1 Y 1 A LYS 281 ? NZ ? A LYS 145 NZ 13 1 Y 1 A ASP 326 ? CG ? A ASP 190 CG 14 1 Y 1 A ASP 326 ? OD1 ? A ASP 190 OD1 15 1 Y 1 A ASP 326 ? OD2 ? A ASP 190 OD2 16 1 Y 1 A GLU 361 ? CD ? A GLU 225 CD 17 1 Y 1 A GLU 361 ? OE1 ? A GLU 225 OE1 18 1 Y 1 A GLU 361 ? OE2 ? A GLU 225 OE2 19 1 N 1 A ADP 403 ? "C5'" ? D ADP 1 "C5'" 20 1 N 1 A ADP 403 ? "C4'" ? D ADP 1 "C4'" 21 1 N 1 A ADP 403 ? "O4'" ? D ADP 1 "O4'" 22 1 N 1 A ADP 403 ? "C3'" ? D ADP 1 "C3'" 23 1 N 1 A ADP 403 ? "O3'" ? D ADP 1 "O3'" 24 1 N 1 A ADP 403 ? "C2'" ? D ADP 1 "C2'" 25 1 N 1 A ADP 403 ? "O2'" ? D ADP 1 "O2'" 26 1 N 1 A ADP 403 ? "C1'" ? D ADP 1 "C1'" 27 1 N 1 A ADP 403 ? N9 ? D ADP 1 N9 28 1 N 1 A ADP 403 ? C8 ? D ADP 1 C8 29 1 N 1 A ADP 403 ? N7 ? D ADP 1 N7 30 1 N 1 A ADP 403 ? C5 ? D ADP 1 C5 31 1 N 1 A ADP 403 ? C6 ? D ADP 1 C6 32 1 N 1 A ADP 403 ? N6 ? D ADP 1 N6 33 1 N 1 A ADP 403 ? N1 ? D ADP 1 N1 34 1 N 1 A ADP 403 ? C2 ? D ADP 1 C2 35 1 N 1 A ADP 403 ? N3 ? D ADP 1 N3 36 1 N 1 A ADP 403 ? C4 ? D ADP 1 C4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 328 ? A LYS 192 2 1 Y 1 A THR 329 ? A THR 193 3 1 Y 1 A ARG 379 ? A ARG 243 4 1 Y 1 A ASN 380 ? A ASN 244 5 1 Y 1 A SER 381 ? A SER 245 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADP PB P N N 1 ADP O1B O N N 2 ADP O2B O N N 3 ADP O3B O N N 4 ADP PA P N S 5 ADP O1A O N N 6 ADP O2A O N N 7 ADP O3A O N N 8 ADP "O5'" O N N 9 ADP "C5'" C N N 10 ADP "C4'" C N R 11 ADP "O4'" O N N 12 ADP "C3'" C N S 13 ADP "O3'" O N N 14 ADP "C2'" C N R 15 ADP "O2'" O N N 16 ADP "C1'" C N R 17 ADP N9 N Y N 18 ADP C8 C Y N 19 ADP N7 N Y N 20 ADP C5 C Y N 21 ADP C6 C Y N 22 ADP N6 N N N 23 ADP N1 N Y N 24 ADP C2 C Y N 25 ADP N3 N Y N 26 ADP C4 C Y N 27 ADP HOB2 H N N 28 ADP HOB3 H N N 29 ADP HOA2 H N N 30 ADP "H5'1" H N N 31 ADP "H5'2" H N N 32 ADP "H4'" H N N 33 ADP "H3'" H N N 34 ADP "HO3'" H N N 35 ADP "H2'" H N N 36 ADP "HO2'" H N N 37 ADP "H1'" H N N 38 ADP H8 H N N 39 ADP HN61 H N N 40 ADP HN62 H N N 41 ADP H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 CYS N N N N 116 CYS CA C N R 117 CYS C C N N 118 CYS O O N N 119 CYS CB C N N 120 CYS SG S N N 121 CYS OXT O N N 122 CYS H H N N 123 CYS H2 H N N 124 CYS HA H N N 125 CYS HB2 H N N 126 CYS HB3 H N N 127 CYS HG H N N 128 CYS HXT H N N 129 GLN N N N N 130 GLN CA C N S 131 GLN C C N N 132 GLN O O N N 133 GLN CB C N N 134 GLN CG C N N 135 GLN CD C N N 136 GLN OE1 O N N 137 GLN NE2 N N N 138 GLN OXT O N N 139 GLN H H N N 140 GLN H2 H N N 141 GLN HA H N N 142 GLN HB2 H N N 143 GLN HB3 H N N 144 GLN HG2 H N N 145 GLN HG3 H N N 146 GLN HE21 H N N 147 GLN HE22 H N N 148 GLN HXT H N N 149 GLU N N N N 150 GLU CA C N S 151 GLU C C N N 152 GLU O O N N 153 GLU CB C N N 154 GLU CG C N N 155 GLU CD C N N 156 GLU OE1 O N N 157 GLU OE2 O N N 158 GLU OXT O N N 159 GLU H H N N 160 GLU H2 H N N 161 GLU HA H N N 162 GLU HB2 H N N 163 GLU HB3 H N N 164 GLU HG2 H N N 165 GLU HG3 H N N 166 GLU HE2 H N N 167 GLU HXT H N N 168 GLY N N N N 169 GLY CA C N N 170 GLY C C N N 171 GLY O O N N 172 GLY OXT O N N 173 GLY H H N N 174 GLY H2 H N N 175 GLY HA2 H N N 176 GLY HA3 H N N 177 GLY HXT H N N 178 GOL C1 C N N 179 GOL O1 O N N 180 GOL C2 C N N 181 GOL O2 O N N 182 GOL C3 C N N 183 GOL O3 O N N 184 GOL H11 H N N 185 GOL H12 H N N 186 GOL HO1 H N N 187 GOL H2 H N N 188 GOL HO2 H N N 189 GOL H31 H N N 190 GOL H32 H N N 191 GOL HO3 H N N 192 HIS N N N N 193 HIS CA C N S 194 HIS C C N N 195 HIS O O N N 196 HIS CB C N N 197 HIS CG C Y N 198 HIS ND1 N Y N 199 HIS CD2 C Y N 200 HIS CE1 C Y N 201 HIS NE2 N Y N 202 HIS OXT O N N 203 HIS H H N N 204 HIS H2 H N N 205 HIS HA H N N 206 HIS HB2 H N N 207 HIS HB3 H N N 208 HIS HD1 H N N 209 HIS HD2 H N N 210 HIS HE1 H N N 211 HIS HE2 H N N 212 HIS HXT H N N 213 HOH O O N N 214 HOH H1 H N N 215 HOH H2 H N N 216 ILE N N N N 217 ILE CA C N S 218 ILE C C N N 219 ILE O O N N 220 ILE CB C N S 221 ILE CG1 C N N 222 ILE CG2 C N N 223 ILE CD1 C N N 224 ILE OXT O N N 225 ILE H H N N 226 ILE H2 H N N 227 ILE HA H N N 228 ILE HB H N N 229 ILE HG12 H N N 230 ILE HG13 H N N 231 ILE HG21 H N N 232 ILE HG22 H N N 233 ILE HG23 H N N 234 ILE HD11 H N N 235 ILE HD12 H N N 236 ILE HD13 H N N 237 ILE HXT H N N 238 LEU N N N N 239 LEU CA C N S 240 LEU C C N N 241 LEU O O N N 242 LEU CB C N N 243 LEU CG C N N 244 LEU CD1 C N N 245 LEU CD2 C N N 246 LEU OXT O N N 247 LEU H H N N 248 LEU H2 H N N 249 LEU HA H N N 250 LEU HB2 H N N 251 LEU HB3 H N N 252 LEU HG H N N 253 LEU HD11 H N N 254 LEU HD12 H N N 255 LEU HD13 H N N 256 LEU HD21 H N N 257 LEU HD22 H N N 258 LEU HD23 H N N 259 LEU HXT H N N 260 LYS N N N N 261 LYS CA C N S 262 LYS C C N N 263 LYS O O N N 264 LYS CB C N N 265 LYS CG C N N 266 LYS CD C N N 267 LYS CE C N N 268 LYS NZ N N N 269 LYS OXT O N N 270 LYS H H N N 271 LYS H2 H N N 272 LYS HA H N N 273 LYS HB2 H N N 274 LYS HB3 H N N 275 LYS HG2 H N N 276 LYS HG3 H N N 277 LYS HD2 H N N 278 LYS HD3 H N N 279 LYS HE2 H N N 280 LYS HE3 H N N 281 LYS HZ1 H N N 282 LYS HZ2 H N N 283 LYS HZ3 H N N 284 LYS HXT H N N 285 MET N N N N 286 MET CA C N S 287 MET C C N N 288 MET O O N N 289 MET CB C N N 290 MET CG C N N 291 MET SD S N N 292 MET CE C N N 293 MET OXT O N N 294 MET H H N N 295 MET H2 H N N 296 MET HA H N N 297 MET HB2 H N N 298 MET HB3 H N N 299 MET HG2 H N N 300 MET HG3 H N N 301 MET HE1 H N N 302 MET HE2 H N N 303 MET HE3 H N N 304 MET HXT H N N 305 MG MG MG N N 306 PHE N N N N 307 PHE CA C N S 308 PHE C C N N 309 PHE O O N N 310 PHE CB C N N 311 PHE CG C Y N 312 PHE CD1 C Y N 313 PHE CD2 C Y N 314 PHE CE1 C Y N 315 PHE CE2 C Y N 316 PHE CZ C Y N 317 PHE OXT O N N 318 PHE H H N N 319 PHE H2 H N N 320 PHE HA H N N 321 PHE HB2 H N N 322 PHE HB3 H N N 323 PHE HD1 H N N 324 PHE HD2 H N N 325 PHE HE1 H N N 326 PHE HE2 H N N 327 PHE HZ H N N 328 PHE HXT H N N 329 PRO N N N N 330 PRO CA C N S 331 PRO C C N N 332 PRO O O N N 333 PRO CB C N N 334 PRO CG C N N 335 PRO CD C N N 336 PRO OXT O N N 337 PRO H H N N 338 PRO HA H N N 339 PRO HB2 H N N 340 PRO HB3 H N N 341 PRO HG2 H N N 342 PRO HG3 H N N 343 PRO HD2 H N N 344 PRO HD3 H N N 345 PRO HXT H N N 346 SER N N N N 347 SER CA C N S 348 SER C C N N 349 SER O O N N 350 SER CB C N N 351 SER OG O N N 352 SER OXT O N N 353 SER H H N N 354 SER H2 H N N 355 SER HA H N N 356 SER HB2 H N N 357 SER HB3 H N N 358 SER HG H N N 359 SER HXT H N N 360 THR N N N N 361 THR CA C N S 362 THR C C N N 363 THR O O N N 364 THR CB C N R 365 THR OG1 O N N 366 THR CG2 C N N 367 THR OXT O N N 368 THR H H N N 369 THR H2 H N N 370 THR HA H N N 371 THR HB H N N 372 THR HG1 H N N 373 THR HG21 H N N 374 THR HG22 H N N 375 THR HG23 H N N 376 THR HXT H N N 377 TRP N N N N 378 TRP CA C N S 379 TRP C C N N 380 TRP O O N N 381 TRP CB C N N 382 TRP CG C Y N 383 TRP CD1 C Y N 384 TRP CD2 C Y N 385 TRP NE1 N Y N 386 TRP CE2 C Y N 387 TRP CE3 C Y N 388 TRP CZ2 C Y N 389 TRP CZ3 C Y N 390 TRP CH2 C Y N 391 TRP OXT O N N 392 TRP H H N N 393 TRP H2 H N N 394 TRP HA H N N 395 TRP HB2 H N N 396 TRP HB3 H N N 397 TRP HD1 H N N 398 TRP HE1 H N N 399 TRP HE3 H N N 400 TRP HZ2 H N N 401 TRP HZ3 H N N 402 TRP HH2 H N N 403 TRP HXT H N N 404 TYR N N N N 405 TYR CA C N S 406 TYR C C N N 407 TYR O O N N 408 TYR CB C N N 409 TYR CG C Y N 410 TYR CD1 C Y N 411 TYR CD2 C Y N 412 TYR CE1 C Y N 413 TYR CE2 C Y N 414 TYR CZ C Y N 415 TYR OH O N N 416 TYR OXT O N N 417 TYR H H N N 418 TYR H2 H N N 419 TYR HA H N N 420 TYR HB2 H N N 421 TYR HB3 H N N 422 TYR HD1 H N N 423 TYR HD2 H N N 424 TYR HE1 H N N 425 TYR HE2 H N N 426 TYR HH H N N 427 TYR HXT H N N 428 VAL N N N N 429 VAL CA C N S 430 VAL C C N N 431 VAL O O N N 432 VAL CB C N N 433 VAL CG1 C N N 434 VAL CG2 C N N 435 VAL OXT O N N 436 VAL H H N N 437 VAL H2 H N N 438 VAL HA H N N 439 VAL HB H N N 440 VAL HG11 H N N 441 VAL HG12 H N N 442 VAL HG13 H N N 443 VAL HG21 H N N 444 VAL HG22 H N N 445 VAL HG23 H N N 446 VAL HXT H N N 447 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADP PB O1B doub N N 1 ADP PB O2B sing N N 2 ADP PB O3B sing N N 3 ADP PB O3A sing N N 4 ADP O2B HOB2 sing N N 5 ADP O3B HOB3 sing N N 6 ADP PA O1A doub N N 7 ADP PA O2A sing N N 8 ADP PA O3A sing N N 9 ADP PA "O5'" sing N N 10 ADP O2A HOA2 sing N N 11 ADP "O5'" "C5'" sing N N 12 ADP "C5'" "C4'" sing N N 13 ADP "C5'" "H5'1" sing N N 14 ADP "C5'" "H5'2" sing N N 15 ADP "C4'" "O4'" sing N N 16 ADP "C4'" "C3'" sing N N 17 ADP "C4'" "H4'" sing N N 18 ADP "O4'" "C1'" sing N N 19 ADP "C3'" "O3'" sing N N 20 ADP "C3'" "C2'" sing N N 21 ADP "C3'" "H3'" sing N N 22 ADP "O3'" "HO3'" sing N N 23 ADP "C2'" "O2'" sing N N 24 ADP "C2'" "C1'" sing N N 25 ADP "C2'" "H2'" sing N N 26 ADP "O2'" "HO2'" sing N N 27 ADP "C1'" N9 sing N N 28 ADP "C1'" "H1'" sing N N 29 ADP N9 C8 sing Y N 30 ADP N9 C4 sing Y N 31 ADP C8 N7 doub Y N 32 ADP C8 H8 sing N N 33 ADP N7 C5 sing Y N 34 ADP C5 C6 sing Y N 35 ADP C5 C4 doub Y N 36 ADP C6 N6 sing N N 37 ADP C6 N1 doub Y N 38 ADP N6 HN61 sing N N 39 ADP N6 HN62 sing N N 40 ADP N1 C2 sing Y N 41 ADP C2 N3 doub Y N 42 ADP C2 H2 sing N N 43 ADP N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CYS N CA sing N N 114 CYS N H sing N N 115 CYS N H2 sing N N 116 CYS CA C sing N N 117 CYS CA CB sing N N 118 CYS CA HA sing N N 119 CYS C O doub N N 120 CYS C OXT sing N N 121 CYS CB SG sing N N 122 CYS CB HB2 sing N N 123 CYS CB HB3 sing N N 124 CYS SG HG sing N N 125 CYS OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 GOL C1 O1 sing N N 173 GOL C1 C2 sing N N 174 GOL C1 H11 sing N N 175 GOL C1 H12 sing N N 176 GOL O1 HO1 sing N N 177 GOL C2 O2 sing N N 178 GOL C2 C3 sing N N 179 GOL C2 H2 sing N N 180 GOL O2 HO2 sing N N 181 GOL C3 O3 sing N N 182 GOL C3 H31 sing N N 183 GOL C3 H32 sing N N 184 GOL O3 HO3 sing N N 185 HIS N CA sing N N 186 HIS N H sing N N 187 HIS N H2 sing N N 188 HIS CA C sing N N 189 HIS CA CB sing N N 190 HIS CA HA sing N N 191 HIS C O doub N N 192 HIS C OXT sing N N 193 HIS CB CG sing N N 194 HIS CB HB2 sing N N 195 HIS CB HB3 sing N N 196 HIS CG ND1 sing Y N 197 HIS CG CD2 doub Y N 198 HIS ND1 CE1 doub Y N 199 HIS ND1 HD1 sing N N 200 HIS CD2 NE2 sing Y N 201 HIS CD2 HD2 sing N N 202 HIS CE1 NE2 sing Y N 203 HIS CE1 HE1 sing N N 204 HIS NE2 HE2 sing N N 205 HIS OXT HXT sing N N 206 HOH O H1 sing N N 207 HOH O H2 sing N N 208 ILE N CA sing N N 209 ILE N H sing N N 210 ILE N H2 sing N N 211 ILE CA C sing N N 212 ILE CA CB sing N N 213 ILE CA HA sing N N 214 ILE C O doub N N 215 ILE C OXT sing N N 216 ILE CB CG1 sing N N 217 ILE CB CG2 sing N N 218 ILE CB HB sing N N 219 ILE CG1 CD1 sing N N 220 ILE CG1 HG12 sing N N 221 ILE CG1 HG13 sing N N 222 ILE CG2 HG21 sing N N 223 ILE CG2 HG22 sing N N 224 ILE CG2 HG23 sing N N 225 ILE CD1 HD11 sing N N 226 ILE CD1 HD12 sing N N 227 ILE CD1 HD13 sing N N 228 ILE OXT HXT sing N N 229 LEU N CA sing N N 230 LEU N H sing N N 231 LEU N H2 sing N N 232 LEU CA C sing N N 233 LEU CA CB sing N N 234 LEU CA HA sing N N 235 LEU C O doub N N 236 LEU C OXT sing N N 237 LEU CB CG sing N N 238 LEU CB HB2 sing N N 239 LEU CB HB3 sing N N 240 LEU CG CD1 sing N N 241 LEU CG CD2 sing N N 242 LEU CG HG sing N N 243 LEU CD1 HD11 sing N N 244 LEU CD1 HD12 sing N N 245 LEU CD1 HD13 sing N N 246 LEU CD2 HD21 sing N N 247 LEU CD2 HD22 sing N N 248 LEU CD2 HD23 sing N N 249 LEU OXT HXT sing N N 250 LYS N CA sing N N 251 LYS N H sing N N 252 LYS N H2 sing N N 253 LYS CA C sing N N 254 LYS CA CB sing N N 255 LYS CA HA sing N N 256 LYS C O doub N N 257 LYS C OXT sing N N 258 LYS CB CG sing N N 259 LYS CB HB2 sing N N 260 LYS CB HB3 sing N N 261 LYS CG CD sing N N 262 LYS CG HG2 sing N N 263 LYS CG HG3 sing N N 264 LYS CD CE sing N N 265 LYS CD HD2 sing N N 266 LYS CD HD3 sing N N 267 LYS CE NZ sing N N 268 LYS CE HE2 sing N N 269 LYS CE HE3 sing N N 270 LYS NZ HZ1 sing N N 271 LYS NZ HZ2 sing N N 272 LYS NZ HZ3 sing N N 273 LYS OXT HXT sing N N 274 MET N CA sing N N 275 MET N H sing N N 276 MET N H2 sing N N 277 MET CA C sing N N 278 MET CA CB sing N N 279 MET CA HA sing N N 280 MET C O doub N N 281 MET C OXT sing N N 282 MET CB CG sing N N 283 MET CB HB2 sing N N 284 MET CB HB3 sing N N 285 MET CG SD sing N N 286 MET CG HG2 sing N N 287 MET CG HG3 sing N N 288 MET SD CE sing N N 289 MET CE HE1 sing N N 290 MET CE HE2 sing N N 291 MET CE HE3 sing N N 292 MET OXT HXT sing N N 293 PHE N CA sing N N 294 PHE N H sing N N 295 PHE N H2 sing N N 296 PHE CA C sing N N 297 PHE CA CB sing N N 298 PHE CA HA sing N N 299 PHE C O doub N N 300 PHE C OXT sing N N 301 PHE CB CG sing N N 302 PHE CB HB2 sing N N 303 PHE CB HB3 sing N N 304 PHE CG CD1 doub Y N 305 PHE CG CD2 sing Y N 306 PHE CD1 CE1 sing Y N 307 PHE CD1 HD1 sing N N 308 PHE CD2 CE2 doub Y N 309 PHE CD2 HD2 sing N N 310 PHE CE1 CZ doub Y N 311 PHE CE1 HE1 sing N N 312 PHE CE2 CZ sing Y N 313 PHE CE2 HE2 sing N N 314 PHE CZ HZ sing N N 315 PHE OXT HXT sing N N 316 PRO N CA sing N N 317 PRO N CD sing N N 318 PRO N H sing N N 319 PRO CA C sing N N 320 PRO CA CB sing N N 321 PRO CA HA sing N N 322 PRO C O doub N N 323 PRO C OXT sing N N 324 PRO CB CG sing N N 325 PRO CB HB2 sing N N 326 PRO CB HB3 sing N N 327 PRO CG CD sing N N 328 PRO CG HG2 sing N N 329 PRO CG HG3 sing N N 330 PRO CD HD2 sing N N 331 PRO CD HD3 sing N N 332 PRO OXT HXT sing N N 333 SER N CA sing N N 334 SER N H sing N N 335 SER N H2 sing N N 336 SER CA C sing N N 337 SER CA CB sing N N 338 SER CA HA sing N N 339 SER C O doub N N 340 SER C OXT sing N N 341 SER CB OG sing N N 342 SER CB HB2 sing N N 343 SER CB HB3 sing N N 344 SER OG HG sing N N 345 SER OXT HXT sing N N 346 THR N CA sing N N 347 THR N H sing N N 348 THR N H2 sing N N 349 THR CA C sing N N 350 THR CA CB sing N N 351 THR CA HA sing N N 352 THR C O doub N N 353 THR C OXT sing N N 354 THR CB OG1 sing N N 355 THR CB CG2 sing N N 356 THR CB HB sing N N 357 THR OG1 HG1 sing N N 358 THR CG2 HG21 sing N N 359 THR CG2 HG22 sing N N 360 THR CG2 HG23 sing N N 361 THR OXT HXT sing N N 362 TRP N CA sing N N 363 TRP N H sing N N 364 TRP N H2 sing N N 365 TRP CA C sing N N 366 TRP CA CB sing N N 367 TRP CA HA sing N N 368 TRP C O doub N N 369 TRP C OXT sing N N 370 TRP CB CG sing N N 371 TRP CB HB2 sing N N 372 TRP CB HB3 sing N N 373 TRP CG CD1 doub Y N 374 TRP CG CD2 sing Y N 375 TRP CD1 NE1 sing Y N 376 TRP CD1 HD1 sing N N 377 TRP CD2 CE2 doub Y N 378 TRP CD2 CE3 sing Y N 379 TRP NE1 CE2 sing Y N 380 TRP NE1 HE1 sing N N 381 TRP CE2 CZ2 sing Y N 382 TRP CE3 CZ3 doub Y N 383 TRP CE3 HE3 sing N N 384 TRP CZ2 CH2 doub Y N 385 TRP CZ2 HZ2 sing N N 386 TRP CZ3 CH2 sing Y N 387 TRP CZ3 HZ3 sing N N 388 TRP CH2 HH2 sing N N 389 TRP OXT HXT sing N N 390 TYR N CA sing N N 391 TYR N H sing N N 392 TYR N H2 sing N N 393 TYR CA C sing N N 394 TYR CA CB sing N N 395 TYR CA HA sing N N 396 TYR C O doub N N 397 TYR C OXT sing N N 398 TYR CB CG sing N N 399 TYR CB HB2 sing N N 400 TYR CB HB3 sing N N 401 TYR CG CD1 doub Y N 402 TYR CG CD2 sing Y N 403 TYR CD1 CE1 sing Y N 404 TYR CD1 HD1 sing N N 405 TYR CD2 CE2 doub Y N 406 TYR CD2 HD2 sing N N 407 TYR CE1 CZ doub Y N 408 TYR CE1 HE1 sing N N 409 TYR CE2 CZ sing Y N 410 TYR CE2 HE2 sing N N 411 TYR CZ OH sing N N 412 TYR OH HH sing N N 413 TYR OXT HXT sing N N 414 VAL N CA sing N N 415 VAL N H sing N N 416 VAL N H2 sing N N 417 VAL CA C sing N N 418 VAL CA CB sing N N 419 VAL CA HA sing N N 420 VAL C O doub N N 421 VAL C OXT sing N N 422 VAL CB CG1 sing N N 423 VAL CB CG2 sing N N 424 VAL CB HB sing N N 425 VAL CG1 HG11 sing N N 426 VAL CG1 HG12 sing N N 427 VAL CG1 HG13 sing N N 428 VAL CG2 HG21 sing N N 429 VAL CG2 HG22 sing N N 430 VAL CG2 HG23 sing N N 431 VAL OXT HXT sing N N 432 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "ADENOSINE-5'-DIPHOSPHATE" ADP 4 GLYCEROL GOL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2DB3 _pdbx_initial_refinement_model.details 'PDB entry 2DB3' #