HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-JUN-08 3DM8 TITLE CRYSTAL STRUCTURE OF PUTATIVE ISOMERASE FROM RHODOPSEUDOMONAS TITLE 2 PALUSTRIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN RPA4348; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; SOURCE 3 ORGANISM_TAXID: 1076; SOURCE 4 GENE: RPA4348; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RP; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P15TV LIC KEYWDS SIRAS, PUTATIVE ISOMERASE, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.CYMBOROWSKI,M.CHRUSZCZ,T.SKARINA,O.KAGAN,A.SAVCHENKO,A.M.EDWARDS, AUTHOR 2 A.JOACHIMIAK,W.MINOR,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 5 21-FEB-24 3DM8 1 REMARK REVDAT 4 13-APR-22 3DM8 1 AUTHOR JRNL REMARK REVDAT 3 13-JUL-11 3DM8 1 VERSN REVDAT 2 24-FEB-09 3DM8 1 VERSN REVDAT 1 05-AUG-08 3DM8 0 JRNL AUTH M.CYMBOROWSKI,W.MINOR JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE ISOMERASE FROM JRNL TITL 2 RHODOPSEUDOMONAS PALUSTRIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 15828 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 790 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1058 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.1930 REMARK 3 BIN FREE R VALUE SET COUNT : 51 REMARK 3 BIN FREE R VALUE : 0.2260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1079 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 174 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : 0.32000 REMARK 3 B33 (A**2) : -0.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.117 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.116 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.219 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1129 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 782 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1528 ; 1.705 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1880 ; 1.428 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 142 ; 6.437 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;32.408 ;22.143 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 192 ;15.818 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;17.454 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 171 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1262 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 258 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 682 ; 1.001 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 277 ; 0.333 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1101 ; 1.868 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 447 ; 3.237 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 423 ; 5.083 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 68 REMARK 3 ORIGIN FOR THE GROUP (A): 2.0310 30.2750 36.4480 REMARK 3 T TENSOR REMARK 3 T11: -0.0298 T22: 0.0138 REMARK 3 T33: -0.0120 T12: -0.0007 REMARK 3 T13: -0.0006 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.8018 L22: 1.2474 REMARK 3 L33: 1.8430 L12: -0.2005 REMARK 3 L13: 0.1332 L23: 0.1590 REMARK 3 S TENSOR REMARK 3 S11: -0.0246 S12: -0.0331 S13: -0.1430 REMARK 3 S21: 0.0738 S22: -0.0014 S23: 0.0333 REMARK 3 S31: 0.1923 S32: 0.1278 S33: 0.0261 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 69 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 1.9620 25.8790 51.6430 REMARK 3 T TENSOR REMARK 3 T11: -0.0277 T22: -0.0020 REMARK 3 T33: 0.1060 T12: -0.0115 REMARK 3 T13: -0.0185 T23: 0.0384 REMARK 3 L TENSOR REMARK 3 L11: 11.5955 L22: 29.7302 REMARK 3 L33: 0.0000 L12: -5.6667 REMARK 3 L13: -4.6950 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.1793 S12: -0.1584 S13: 0.0838 REMARK 3 S21: -0.1157 S22: 0.2910 S23: 1.5039 REMARK 3 S31: 0.2437 S32: -0.4958 S33: -0.4702 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 1.8360 32.6060 48.6040 REMARK 3 T TENSOR REMARK 3 T11: -0.0467 T22: 0.0398 REMARK 3 T33: 0.1073 T12: 0.0006 REMARK 3 T13: -0.0005 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 2.3941 L22: 2.1782 REMARK 3 L33: 1.9679 L12: -2.2331 REMARK 3 L13: -0.0252 L23: -0.4095 REMARK 3 S TENSOR REMARK 3 S11: -0.2277 S12: 0.0897 S13: -0.3002 REMARK 3 S21: 0.1783 S22: 0.0606 S23: 0.0210 REMARK 3 S31: 0.0952 S32: -0.0379 S33: 0.1670 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 109 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): -7.1070 37.2150 36.2880 REMARK 3 T TENSOR REMARK 3 T11: -0.0722 T22: 0.0361 REMARK 3 T33: -0.0039 T12: -0.0045 REMARK 3 T13: -0.0234 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 14.7966 L22: 3.6802 REMARK 3 L33: 4.3582 L12: 3.9458 REMARK 3 L13: 0.9187 L23: 3.1286 REMARK 3 S TENSOR REMARK 3 S11: -0.0673 S12: -0.1274 S13: -0.0207 REMARK 3 S21: -0.0426 S22: -0.1678 S23: 0.2100 REMARK 3 S31: -0.0898 S32: -0.4041 S33: 0.2352 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 15.9880 36.6160 49.9750 REMARK 3 T TENSOR REMARK 3 T11: -0.0986 T22: 0.1057 REMARK 3 T33: 0.0527 T12: 0.0096 REMARK 3 T13: -0.0119 T23: -0.0761 REMARK 3 L TENSOR REMARK 3 L11: 8.2821 L22: 6.8972 REMARK 3 L33: 5.7531 L12: -2.9256 REMARK 3 L13: 5.0272 L23: -2.4887 REMARK 3 S TENSOR REMARK 3 S11: -0.1519 S12: 0.3598 S13: -0.5160 REMARK 3 S21: 0.2143 S22: 0.1323 S23: -0.4065 REMARK 3 S31: -0.1286 S32: 0.4991 S33: 0.0197 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048213. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97912 REMARK 200 MONOCHROMATOR : SI-111 CHANNEL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : APS-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15870 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.05700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 35.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.32200 REMARK 200 R SYM FOR SHELL (I) : 0.32200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIR/SIRAS REMARK 200 SOFTWARE USED: HKL-3000, MLPHARE, SHELXD, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400 15%, MGCL2 0.2M, 0.1M HEPES, PH REMARK 280 7.5, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.60550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.60550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 20.29650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.03550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 20.29650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.03550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.60550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 20.29650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.03550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.60550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 20.29650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.03550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 84.07100 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 97.21100 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 161 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 224 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 136 REMARK 465 ILE A 137 REMARK 465 HIS A 138 REMARK 465 LEU A 139 REMARK 465 PRO A 140 REMARK 465 LYS A 141 REMARK 465 ILE A 142 REMARK 465 ALA A 143 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 71 NE CZ NH1 NH2 REMARK 470 GLN A 112 CD OE1 NE2 REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CE9 A 144 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CE9 A 144 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC6271 RELATED DB: TARGETDB DBREF 3DM8 A 1 143 UNP Q6N1Q6 Q6N1Q6_RHOPA 1 143 SEQRES 1 A 143 MET THR GLU HIS SER LEU TRP ARG PHE SER ARG ALA LEU SEQRES 2 A 143 HIS ARG ALA LEU ASN ASP ARG GLN THR GLU GLU LEU ALA SEQRES 3 A 143 THR ILE ILE ASP ASP ASN ILE ASP TRP ALA ILE TYR GLY SEQRES 4 A 143 PRO ILE ASP MET PHE PRO PHE PHE GLY ALA ARG GLN GLY SEQRES 5 A 143 LYS ALA ALA VAL LEU GLU VAL CYS ARG GLN ILE ALA ASP SEQRES 6 A 143 SER VAL ARG ILE TYR ARG TYR HIS ARG GLU SER VAL MET SEQRES 7 A 143 LEU GLY ILE ASP SER ALA ALA SER MET VAL ARG TYR SER SEQRES 8 A 143 LEU THR ALA ALA GLY THR ASN ARG PRO ILE SER VAL ARG SEQRES 9 A 143 MET ALA LEU PHE THR GLN PHE GLN ASN GLY ARG LEU THR SEQRES 10 A 143 ASN LEU ARG MET VAL LEU ASP THR PHE ASP LEU VAL GLU SEQRES 11 A 143 GLN ALA LEU GLY ARG PRO ILE HIS LEU PRO LYS ILE ALA HET CE9 A 144 12 HETNAM CE9 DODECYL NONA ETHYLENE GLYCOL ETHER HETSYN CE9 POLYDOCANOL; THESIT FORMUL 2 CE9 C30 H62 O10 FORMUL 3 HOH *174(H2 O) HELIX 1 1 HIS A 4 ARG A 20 1 17 HELIX 2 2 THR A 22 ILE A 28 1 7 HELIX 3 3 GLY A 52 SER A 66 1 15 HELIX 4 4 ASP A 124 GLY A 134 1 11 SHEET 1 A 6 GLY A 48 GLN A 51 0 SHEET 2 A 6 ILE A 29 TYR A 38 -1 N ILE A 37 O GLY A 48 SHEET 3 A 6 ARG A 115 LEU A 123 1 O MET A 121 N TYR A 38 SHEET 4 A 6 PRO A 100 GLN A 112 -1 N ALA A 106 O VAL A 122 SHEET 5 A 6 SER A 83 ALA A 94 -1 N LEU A 92 O ILE A 101 SHEET 6 A 6 VAL A 67 LEU A 79 -1 N MET A 78 O ALA A 85 SITE 1 AC1 2 ASP A 34 GLN A 51 CRYST1 40.593 84.071 97.211 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024640 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011900 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010290 0.00000