data_3DNP # _entry.id 3DNP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3DNP RCSB RCSB048263 WWPDB D_1000048263 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC60081.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3DNP _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-07-02 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chang, C.' 1 'Tesar, C.' 2 'Jedrzejczak, R.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal structure of Stress response protein yhaX from Bacillus subtilis' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chang, C.' 1 primary 'Tesar, C.' 2 primary 'Jedrzejczak, R.' 3 primary 'Joachimiak, A.' 4 # _cell.length_a 63.939 _cell.length_b 63.939 _cell.length_c 161.485 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3DNP _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 3DNP _symmetry.Int_Tables_number 96 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Stress response protein yhaX' 33050.727 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 249 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)SKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAE KIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLL(MSE) DEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLS(MSE)DDVVAIGHQY DDLP(MSE)IELAGLGVA(MSE)GNAVPEIKRKADWVTRSNDEQGVAY(MSE)(MSE)KEYFR(MSE)QQRKGFLDKFH (MSE)KR ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDA PFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPV IEVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLG VAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRKGFLDKFHMKR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC60081.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 SER n 1 6 LYS n 1 7 GLN n 1 8 LEU n 1 9 LEU n 1 10 ALA n 1 11 LEU n 1 12 ASN n 1 13 ILE n 1 14 ASP n 1 15 GLY n 1 16 ALA n 1 17 LEU n 1 18 LEU n 1 19 ARG n 1 20 SER n 1 21 ASN n 1 22 GLY n 1 23 LYS n 1 24 ILE n 1 25 HIS n 1 26 GLN n 1 27 ALA n 1 28 THR n 1 29 LYS n 1 30 ASP n 1 31 ALA n 1 32 ILE n 1 33 GLU n 1 34 TYR n 1 35 VAL n 1 36 LYS n 1 37 LYS n 1 38 LYS n 1 39 GLY n 1 40 ILE n 1 41 TYR n 1 42 VAL n 1 43 THR n 1 44 LEU n 1 45 VAL n 1 46 THR n 1 47 ASN n 1 48 ARG n 1 49 HIS n 1 50 PHE n 1 51 ARG n 1 52 SER n 1 53 ALA n 1 54 GLN n 1 55 LYS n 1 56 ILE n 1 57 ALA n 1 58 LYS n 1 59 SER n 1 60 LEU n 1 61 LYS n 1 62 LEU n 1 63 ASP n 1 64 ALA n 1 65 LYS n 1 66 LEU n 1 67 ILE n 1 68 THR n 1 69 HIS n 1 70 SER n 1 71 GLY n 1 72 ALA n 1 73 TYR n 1 74 ILE n 1 75 ALA n 1 76 GLU n 1 77 LYS n 1 78 ILE n 1 79 ASP n 1 80 ALA n 1 81 PRO n 1 82 PHE n 1 83 PHE n 1 84 GLU n 1 85 LYS n 1 86 ARG n 1 87 ILE n 1 88 SER n 1 89 ASP n 1 90 ASP n 1 91 HIS n 1 92 THR n 1 93 PHE n 1 94 ASN n 1 95 ILE n 1 96 VAL n 1 97 GLN n 1 98 VAL n 1 99 LEU n 1 100 GLU n 1 101 SER n 1 102 TYR n 1 103 GLN n 1 104 CYS n 1 105 ASN n 1 106 ILE n 1 107 ARG n 1 108 LEU n 1 109 LEU n 1 110 HIS n 1 111 GLU n 1 112 LYS n 1 113 TYR n 1 114 SER n 1 115 ILE n 1 116 GLY n 1 117 ASN n 1 118 LYS n 1 119 LYS n 1 120 LYS n 1 121 VAL n 1 122 ASN n 1 123 SER n 1 124 ASN n 1 125 LEU n 1 126 LEU n 1 127 GLY n 1 128 LYS n 1 129 ALA n 1 130 LEU n 1 131 ILE n 1 132 HIS n 1 133 PRO n 1 134 SER n 1 135 ASP n 1 136 PRO n 1 137 ILE n 1 138 PHE n 1 139 TYR n 1 140 PRO n 1 141 VAL n 1 142 GLN n 1 143 PHE n 1 144 VAL n 1 145 GLU n 1 146 SER n 1 147 LEU n 1 148 SER n 1 149 ASP n 1 150 LEU n 1 151 LEU n 1 152 MSE n 1 153 ASP n 1 154 GLU n 1 155 PRO n 1 156 VAL n 1 157 SER n 1 158 ALA n 1 159 PRO n 1 160 VAL n 1 161 ILE n 1 162 GLU n 1 163 VAL n 1 164 TYR n 1 165 THR n 1 166 GLU n 1 167 HIS n 1 168 ASP n 1 169 ILE n 1 170 GLN n 1 171 HIS n 1 172 ASP n 1 173 ILE n 1 174 THR n 1 175 GLU n 1 176 THR n 1 177 ILE n 1 178 THR n 1 179 LYS n 1 180 ALA n 1 181 PHE n 1 182 PRO n 1 183 ALA n 1 184 VAL n 1 185 ASP n 1 186 VAL n 1 187 ILE n 1 188 ARG n 1 189 VAL n 1 190 ASN n 1 191 ASP n 1 192 GLU n 1 193 LYS n 1 194 LEU n 1 195 ASN n 1 196 ILE n 1 197 VAL n 1 198 PRO n 1 199 LYS n 1 200 GLY n 1 201 VAL n 1 202 SER n 1 203 LYS n 1 204 GLU n 1 205 ALA n 1 206 GLY n 1 207 LEU n 1 208 ALA n 1 209 LEU n 1 210 VAL n 1 211 ALA n 1 212 SER n 1 213 GLU n 1 214 LEU n 1 215 GLY n 1 216 LEU n 1 217 SER n 1 218 MSE n 1 219 ASP n 1 220 ASP n 1 221 VAL n 1 222 VAL n 1 223 ALA n 1 224 ILE n 1 225 GLY n 1 226 HIS n 1 227 GLN n 1 228 TYR n 1 229 ASP n 1 230 ASP n 1 231 LEU n 1 232 PRO n 1 233 MSE n 1 234 ILE n 1 235 GLU n 1 236 LEU n 1 237 ALA n 1 238 GLY n 1 239 LEU n 1 240 GLY n 1 241 VAL n 1 242 ALA n 1 243 MSE n 1 244 GLY n 1 245 ASN n 1 246 ALA n 1 247 VAL n 1 248 PRO n 1 249 GLU n 1 250 ILE n 1 251 LYS n 1 252 ARG n 1 253 LYS n 1 254 ALA n 1 255 ASP n 1 256 TRP n 1 257 VAL n 1 258 THR n 1 259 ARG n 1 260 SER n 1 261 ASN n 1 262 ASP n 1 263 GLU n 1 264 GLN n 1 265 GLY n 1 266 VAL n 1 267 ALA n 1 268 TYR n 1 269 MSE n 1 270 MSE n 1 271 LYS n 1 272 GLU n 1 273 TYR n 1 274 PHE n 1 275 ARG n 1 276 MSE n 1 277 GLN n 1 278 GLN n 1 279 ARG n 1 280 LYS n 1 281 GLY n 1 282 PHE n 1 283 LEU n 1 284 ASP n 1 285 LYS n 1 286 PHE n 1 287 HIS n 1 288 MSE n 1 289 LYS n 1 290 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'yhaX, BSU09830' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) star' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG19b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YHAX_BACSU _struct_ref.pdbx_db_accession O07539 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFF EKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEV YTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM GNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRKGFLDKFHMKR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DNP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 290 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O07539 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 287 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 287 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DNP SER A 1 ? UNP O07539 ? ? 'EXPRESSION TAG' -2 1 1 3DNP ASN A 2 ? UNP O07539 ? ? 'EXPRESSION TAG' -1 2 1 3DNP ALA A 3 ? UNP O07539 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3DNP _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '50mM MgCl2, 0.1 M HEPES pH 7.5, 30% PEGMME 550, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-04-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97921 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97921 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3DNP _reflns.d_resolution_high 1.850 _reflns.d_resolution_low 50.000 _reflns.number_obs 29455 _reflns.pdbx_Rmerge_I_obs 0.096 _reflns.pdbx_netI_over_sigmaI 12.600 _reflns.pdbx_chi_squared 2.900 _reflns.pdbx_redundancy 13.500 _reflns.percent_possible_obs 99.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.number_all 29564 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 27.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.87 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.894 _reflns_shell.meanI_over_sigI_obs 3.48 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.506 _reflns_shell.pdbx_redundancy 10.00 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 713 _reflns_shell.percent_possible_all 100.00 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DNP _refine.ls_d_res_high 1.850 _refine.ls_d_res_low 50.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.410 _refine.ls_number_reflns_obs 29313 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.169 _refine.ls_R_factor_R_work 0.167 _refine.ls_R_factor_R_free 0.207 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1491 _refine.B_iso_mean 29.093 _refine.aniso_B[1][1] 0.030 _refine.aniso_B[2][2] 0.030 _refine.aniso_B[3][3] -0.060 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.pdbx_overall_ESU_R 0.120 _refine.pdbx_overall_ESU_R_Free 0.119 _refine.overall_SU_ML 0.071 _refine.overall_SU_B 4.501 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.overall_FOM_work_R_set 0.894 _refine.B_iso_max 71.75 _refine.B_iso_min 9.90 _refine.occupancy_max 1.00 _refine.occupancy_min 0.25 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 29313 _refine.ls_R_factor_all 0.169 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2161 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 249 _refine_hist.number_atoms_total 2415 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 50.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2367 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3235 1.387 1.974 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 321 5.892 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 108 37.539 25.278 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 450 14.073 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11 18.829 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 373 0.097 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1783 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 1129 0.216 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1624 0.304 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 204 0.165 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 47 0.251 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 26 0.111 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1506 0.917 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2386 1.431 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 966 2.613 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 830 3.720 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.851 _refine_ls_shell.d_res_low 1.899 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.860 _refine_ls_shell.number_reflns_R_work 1972 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.207 _refine_ls_shell.R_factor_R_free 0.293 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 118 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2090 _refine_ls_shell.number_reflns_obs 2090 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DNP _struct.title 'Crystal structure of Stress response protein yhaX from Bacillus subtilis' _struct.pdbx_descriptor 'Stress response protein yhaX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DNP _struct_keywords.pdbx_keywords 'structural genomics, unknown function' _struct_keywords.text ;Stress response protein yhaX, Bacillus subtilis, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Stress response, unknown function ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 25 ? LYS A 38 ? HIS A 22 LYS A 35 1 ? 14 HELX_P HELX_P2 2 HIS A 49 ? LEU A 60 ? HIS A 46 LEU A 57 1 ? 12 HELX_P HELX_P3 3 HIS A 69 ? GLY A 71 ? HIS A 66 GLY A 68 5 ? 3 HELX_P HELX_P4 4 SER A 88 ? SER A 101 ? SER A 85 SER A 98 1 ? 14 HELX_P HELX_P5 5 SER A 123 ? ALA A 129 ? SER A 120 ALA A 126 1 ? 7 HELX_P HELX_P6 6 SER A 146 ? GLU A 154 ? SER A 143 GLU A 151 1 ? 9 HELX_P HELX_P7 7 GLU A 166 ? ASP A 168 ? GLU A 163 ASP A 165 5 ? 3 HELX_P HELX_P8 8 ILE A 169 ? PHE A 181 ? ILE A 166 PHE A 178 1 ? 13 HELX_P HELX_P9 9 SER A 202 ? LEU A 214 ? SER A 199 LEU A 211 1 ? 13 HELX_P HELX_P10 10 SER A 217 ? ASP A 219 ? SER A 214 ASP A 216 5 ? 3 HELX_P HELX_P11 11 GLN A 227 ? ASP A 229 ? GLN A 224 ASP A 226 5 ? 3 HELX_P HELX_P12 12 ASP A 230 ? ALA A 237 ? ASP A 227 ALA A 234 1 ? 8 HELX_P HELX_P13 13 VAL A 247 ? ALA A 254 ? VAL A 244 ALA A 251 1 ? 8 HELX_P HELX_P14 14 GLN A 264 ? LYS A 280 ? GLN A 261 LYS A 277 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 151 C ? ? ? 1_555 A MSE 152 N ? ? A LEU 148 A MSE 149 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A MSE 152 C ? ? ? 1_555 A ASP 153 N ? ? A MSE 149 A ASP 150 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A SER 217 C ? ? ? 1_555 A MSE 218 N ? ? A SER 214 A MSE 215 1_555 ? ? ? ? ? ? ? 1.333 ? covale4 covale ? ? A MSE 218 C ? ? ? 1_555 A ASP 219 N A ? A MSE 215 A ASP 216 1_555 ? ? ? ? ? ? ? 1.338 ? covale5 covale ? ? A MSE 218 C ? ? ? 1_555 A ASP 219 N B ? A MSE 215 A ASP 216 1_555 ? ? ? ? ? ? ? 1.335 ? covale6 covale ? ? A PRO 232 C ? ? ? 1_555 A MSE 233 N ? ? A PRO 229 A MSE 230 1_555 ? ? ? ? ? ? ? 1.335 ? covale7 covale ? ? A MSE 233 C ? ? ? 1_555 A ILE 234 N ? ? A MSE 230 A ILE 231 1_555 ? ? ? ? ? ? ? 1.332 ? covale8 covale ? ? A ALA 242 C ? ? ? 1_555 A MSE 243 N ? ? A ALA 239 A MSE 240 1_555 ? ? ? ? ? ? ? 1.339 ? covale9 covale ? ? A MSE 243 C ? ? ? 1_555 A GLY 244 N ? ? A MSE 240 A GLY 241 1_555 ? ? ? ? ? ? ? 1.327 ? covale10 covale ? ? A TYR 268 C ? ? ? 1_555 A MSE 269 N ? ? A TYR 265 A MSE 266 1_555 ? ? ? ? ? ? ? 1.333 ? covale11 covale ? ? A MSE 269 C ? ? ? 1_555 A MSE 270 N ? ? A MSE 266 A MSE 267 1_555 ? ? ? ? ? ? ? 1.330 ? covale12 covale ? ? A MSE 270 C ? ? ? 1_555 A LYS 271 N ? ? A MSE 267 A LYS 268 1_555 ? ? ? ? ? ? ? 1.333 ? covale13 covale ? ? A ARG 275 C ? ? ? 1_555 A MSE 276 N ? ? A ARG 272 A MSE 273 1_555 ? ? ? ? ? ? ? 1.328 ? covale14 covale ? ? A MSE 276 C ? ? ? 1_555 A GLN 277 N ? ? A MSE 273 A GLN 274 1_555 ? ? ? ? ? ? ? 1.330 ? metalc1 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 301 A HOH 468 1_555 ? ? ? ? ? ? ? 2.075 ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 301 A HOH 467 1_555 ? ? ? ? ? ? ? 2.024 ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 301 A HOH 469 1_555 ? ? ? ? ? ? ? 2.079 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 41 ? LEU A 44 ? TYR A 38 LEU A 41 A 2 LEU A 8 ? LEU A 11 ? LEU A 5 LEU A 8 A 3 VAL A 221 ? GLY A 225 ? VAL A 218 GLY A 222 A 4 LEU A 239 ? ALA A 242 ? LEU A 236 ALA A 239 A 5 TRP A 256 ? VAL A 257 ? TRP A 253 VAL A 254 B 1 LEU A 66 ? THR A 68 ? LEU A 63 THR A 65 B 2 TYR A 73 ? ALA A 75 ? TYR A 70 ALA A 72 B 3 PHE A 83 ? GLU A 84 ? PHE A 80 GLU A 81 C 1 VAL A 141 ? PHE A 143 ? VAL A 138 PHE A 140 C 2 SER A 114 ? GLY A 116 ? SER A 111 GLY A 113 C 3 ASN A 105 ? LEU A 109 ? ASN A 102 LEU A 106 C 4 VAL A 160 ? TYR A 164 ? VAL A 157 TYR A 161 C 5 LYS A 193 ? PRO A 198 ? LYS A 190 PRO A 195 C 6 VAL A 184 ? ASN A 190 ? VAL A 181 ASN A 187 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 41 ? O TYR A 38 N LEU A 9 ? N LEU A 6 A 2 3 N ALA A 10 ? N ALA A 7 O VAL A 222 ? O VAL A 219 A 3 4 N ALA A 223 ? N ALA A 220 O VAL A 241 ? O VAL A 238 A 4 5 N ALA A 242 ? N ALA A 239 O TRP A 256 ? O TRP A 253 B 1 2 N LEU A 66 ? N LEU A 63 O ALA A 75 ? O ALA A 72 B 2 3 N ILE A 74 ? N ILE A 71 O PHE A 83 ? O PHE A 80 C 1 2 O GLN A 142 ? O GLN A 139 N GLY A 116 ? N GLY A 113 C 2 3 O ILE A 115 ? O ILE A 112 N LEU A 108 ? N LEU A 105 C 3 4 N ARG A 107 ? N ARG A 104 O GLU A 162 ? O GLU A 159 C 4 5 N ILE A 161 ? N ILE A 158 O ILE A 196 ? O ILE A 193 C 5 6 O ASN A 195 ? O ASN A 192 N ILE A 187 ? N ILE A 184 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE MG A 301' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HOH D . ? HOH A 467 . ? 1_555 ? 2 AC1 3 HOH D . ? HOH A 468 . ? 1_555 ? 3 AC1 3 HOH D . ? HOH A 469 . ? 1_555 ? 4 AC2 8 ASN A 12 ? ASN A 9 . ? 1_555 ? 5 AC2 8 ILE A 13 ? ILE A 10 . ? 1_555 ? 6 AC2 8 ASP A 14 ? ASP A 11 . ? 1_555 ? 7 AC2 8 THR A 46 ? THR A 43 . ? 1_555 ? 8 AC2 8 ASN A 47 ? ASN A 44 . ? 1_555 ? 9 AC2 8 LYS A 203 ? LYS A 200 . ? 1_555 ? 10 AC2 8 HOH D . ? HOH A 396 . ? 1_555 ? 11 AC2 8 HOH D . ? HOH A 473 . ? 1_555 ? # _atom_sites.entry_id 3DNP _atom_sites.fract_transf_matrix[1][1] 0.015640 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015640 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006193 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MSE 4 1 ? ? ? A . n A 1 5 SER 5 2 ? ? ? A . n A 1 6 LYS 6 3 3 LYS LYS A . n A 1 7 GLN 7 4 4 GLN GLN A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 ALA 10 7 7 ALA ALA A . n A 1 11 LEU 11 8 8 LEU LEU A . n A 1 12 ASN 12 9 9 ASN ASN A . n A 1 13 ILE 13 10 10 ILE ILE A . n A 1 14 ASP 14 11 11 ASP ASP A . n A 1 15 GLY 15 12 12 GLY GLY A . n A 1 16 ALA 16 13 13 ALA ALA A . n A 1 17 LEU 17 14 14 LEU LEU A . n A 1 18 LEU 18 15 15 LEU LEU A . n A 1 19 ARG 19 16 16 ARG ARG A . n A 1 20 SER 20 17 17 SER SER A . n A 1 21 ASN 21 18 18 ASN ASN A . n A 1 22 GLY 22 19 19 GLY GLY A . n A 1 23 LYS 23 20 20 LYS LYS A . n A 1 24 ILE 24 21 21 ILE ILE A . n A 1 25 HIS 25 22 22 HIS HIS A . n A 1 26 GLN 26 23 23 GLN GLN A . n A 1 27 ALA 27 24 24 ALA ALA A . n A 1 28 THR 28 25 25 THR THR A . n A 1 29 LYS 29 26 26 LYS LYS A . n A 1 30 ASP 30 27 27 ASP ASP A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 ILE 32 29 29 ILE ILE A . n A 1 33 GLU 33 30 30 GLU GLU A . n A 1 34 TYR 34 31 31 TYR TYR A . n A 1 35 VAL 35 32 32 VAL VAL A . n A 1 36 LYS 36 33 33 LYS LYS A . n A 1 37 LYS 37 34 34 LYS LYS A . n A 1 38 LYS 38 35 35 LYS LYS A . n A 1 39 GLY 39 36 36 GLY GLY A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 TYR 41 38 38 TYR TYR A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 THR 43 40 40 THR THR A . n A 1 44 LEU 44 41 41 LEU LEU A . n A 1 45 VAL 45 42 42 VAL VAL A . n A 1 46 THR 46 43 43 THR THR A . n A 1 47 ASN 47 44 44 ASN ASN A . n A 1 48 ARG 48 45 45 ARG ARG A . n A 1 49 HIS 49 46 46 HIS HIS A . n A 1 50 PHE 50 47 47 PHE PHE A . n A 1 51 ARG 51 48 48 ARG ARG A . n A 1 52 SER 52 49 49 SER SER A . n A 1 53 ALA 53 50 50 ALA ALA A . n A 1 54 GLN 54 51 51 GLN GLN A . n A 1 55 LYS 55 52 52 LYS LYS A . n A 1 56 ILE 56 53 53 ILE ILE A . n A 1 57 ALA 57 54 54 ALA ALA A . n A 1 58 LYS 58 55 55 LYS LYS A . n A 1 59 SER 59 56 56 SER SER A . n A 1 60 LEU 60 57 57 LEU LEU A . n A 1 61 LYS 61 58 58 LYS LYS A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 ASP 63 60 60 ASP ASP A . n A 1 64 ALA 64 61 61 ALA ALA A . n A 1 65 LYS 65 62 62 LYS LYS A . n A 1 66 LEU 66 63 63 LEU LEU A . n A 1 67 ILE 67 64 64 ILE ILE A . n A 1 68 THR 68 65 65 THR THR A . n A 1 69 HIS 69 66 66 HIS HIS A . n A 1 70 SER 70 67 67 SER SER A . n A 1 71 GLY 71 68 68 GLY GLY A . n A 1 72 ALA 72 69 69 ALA ALA A . n A 1 73 TYR 73 70 70 TYR TYR A . n A 1 74 ILE 74 71 71 ILE ILE A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 GLU 76 73 73 GLU GLU A . n A 1 77 LYS 77 74 74 LYS LYS A . n A 1 78 ILE 78 75 75 ILE ILE A . n A 1 79 ASP 79 76 76 ASP ASP A . n A 1 80 ALA 80 77 77 ALA ALA A . n A 1 81 PRO 81 78 78 PRO PRO A . n A 1 82 PHE 82 79 79 PHE PHE A . n A 1 83 PHE 83 80 80 PHE PHE A . n A 1 84 GLU 84 81 81 GLU GLU A . n A 1 85 LYS 85 82 82 LYS LYS A . n A 1 86 ARG 86 83 83 ARG ARG A . n A 1 87 ILE 87 84 84 ILE ILE A . n A 1 88 SER 88 85 85 SER SER A . n A 1 89 ASP 89 86 86 ASP ASP A . n A 1 90 ASP 90 87 87 ASP ASP A . n A 1 91 HIS 91 88 88 HIS HIS A . n A 1 92 THR 92 89 89 THR THR A . n A 1 93 PHE 93 90 90 PHE PHE A . n A 1 94 ASN 94 91 91 ASN ASN A . n A 1 95 ILE 95 92 92 ILE ILE A . n A 1 96 VAL 96 93 93 VAL VAL A . n A 1 97 GLN 97 94 94 GLN GLN A . n A 1 98 VAL 98 95 95 VAL VAL A . n A 1 99 LEU 99 96 96 LEU LEU A . n A 1 100 GLU 100 97 97 GLU GLU A . n A 1 101 SER 101 98 98 SER SER A . n A 1 102 TYR 102 99 99 TYR TYR A . n A 1 103 GLN 103 100 100 GLN GLN A . n A 1 104 CYS 104 101 101 CYS CYS A . n A 1 105 ASN 105 102 102 ASN ASN A . n A 1 106 ILE 106 103 103 ILE ILE A . n A 1 107 ARG 107 104 104 ARG ARG A . n A 1 108 LEU 108 105 105 LEU LEU A . n A 1 109 LEU 109 106 106 LEU LEU A . n A 1 110 HIS 110 107 107 HIS HIS A . n A 1 111 GLU 111 108 108 GLU GLU A . n A 1 112 LYS 112 109 109 LYS LYS A . n A 1 113 TYR 113 110 110 TYR TYR A . n A 1 114 SER 114 111 111 SER SER A . n A 1 115 ILE 115 112 112 ILE ILE A . n A 1 116 GLY 116 113 113 GLY GLY A . n A 1 117 ASN 117 114 114 ASN ASN A . n A 1 118 LYS 118 115 115 LYS LYS A . n A 1 119 LYS 119 116 116 LYS LYS A . n A 1 120 LYS 120 117 117 LYS LYS A . n A 1 121 VAL 121 118 118 VAL VAL A . n A 1 122 ASN 122 119 119 ASN ASN A . n A 1 123 SER 123 120 120 SER SER A . n A 1 124 ASN 124 121 121 ASN ASN A . n A 1 125 LEU 125 122 122 LEU LEU A . n A 1 126 LEU 126 123 123 LEU LEU A . n A 1 127 GLY 127 124 124 GLY GLY A . n A 1 128 LYS 128 125 125 LYS ALA A . n A 1 129 ALA 129 126 126 ALA ALA A . n A 1 130 LEU 130 127 127 LEU LEU A . n A 1 131 ILE 131 128 128 ILE ILE A . n A 1 132 HIS 132 129 129 HIS HIS A . n A 1 133 PRO 133 130 130 PRO PRO A . n A 1 134 SER 134 131 131 SER SER A . n A 1 135 ASP 135 132 132 ASP ASP A . n A 1 136 PRO 136 133 133 PRO PRO A . n A 1 137 ILE 137 134 134 ILE ILE A . n A 1 138 PHE 138 135 135 PHE PHE A . n A 1 139 TYR 139 136 136 TYR TYR A . n A 1 140 PRO 140 137 137 PRO PRO A . n A 1 141 VAL 141 138 138 VAL VAL A . n A 1 142 GLN 142 139 139 GLN GLN A . n A 1 143 PHE 143 140 140 PHE PHE A . n A 1 144 VAL 144 141 141 VAL VAL A . n A 1 145 GLU 145 142 142 GLU GLU A . n A 1 146 SER 146 143 143 SER SER A . n A 1 147 LEU 147 144 144 LEU LEU A . n A 1 148 SER 148 145 145 SER SER A . n A 1 149 ASP 149 146 146 ASP ASP A . n A 1 150 LEU 150 147 147 LEU LEU A . n A 1 151 LEU 151 148 148 LEU LEU A . n A 1 152 MSE 152 149 149 MSE MSE A . n A 1 153 ASP 153 150 150 ASP ASP A . n A 1 154 GLU 154 151 151 GLU GLU A . n A 1 155 PRO 155 152 152 PRO PRO A . n A 1 156 VAL 156 153 153 VAL VAL A . n A 1 157 SER 157 154 154 SER SER A . n A 1 158 ALA 158 155 155 ALA ALA A . n A 1 159 PRO 159 156 156 PRO PRO A . n A 1 160 VAL 160 157 157 VAL VAL A . n A 1 161 ILE 161 158 158 ILE ILE A . n A 1 162 GLU 162 159 159 GLU GLU A . n A 1 163 VAL 163 160 160 VAL VAL A . n A 1 164 TYR 164 161 161 TYR TYR A . n A 1 165 THR 165 162 162 THR THR A . n A 1 166 GLU 166 163 163 GLU GLU A . n A 1 167 HIS 167 164 164 HIS HIS A . n A 1 168 ASP 168 165 165 ASP ASP A . n A 1 169 ILE 169 166 166 ILE ILE A . n A 1 170 GLN 170 167 167 GLN GLN A . n A 1 171 HIS 171 168 168 HIS HIS A . n A 1 172 ASP 172 169 169 ASP ASP A . n A 1 173 ILE 173 170 170 ILE ILE A . n A 1 174 THR 174 171 171 THR THR A . n A 1 175 GLU 175 172 172 GLU GLU A . n A 1 176 THR 176 173 173 THR THR A . n A 1 177 ILE 177 174 174 ILE ILE A . n A 1 178 THR 178 175 175 THR THR A . n A 1 179 LYS 179 176 176 LYS LYS A . n A 1 180 ALA 180 177 177 ALA ALA A . n A 1 181 PHE 181 178 178 PHE PHE A . n A 1 182 PRO 182 179 179 PRO PRO A . n A 1 183 ALA 183 180 180 ALA ALA A . n A 1 184 VAL 184 181 181 VAL VAL A . n A 1 185 ASP 185 182 182 ASP ASP A . n A 1 186 VAL 186 183 183 VAL VAL A . n A 1 187 ILE 187 184 184 ILE ILE A . n A 1 188 ARG 188 185 185 ARG ARG A . n A 1 189 VAL 189 186 186 VAL VAL A . n A 1 190 ASN 190 187 187 ASN ASN A . n A 1 191 ASP 191 188 188 ASP ASP A . n A 1 192 GLU 192 189 189 GLU GLU A . n A 1 193 LYS 193 190 190 LYS LYS A . n A 1 194 LEU 194 191 191 LEU LEU A . n A 1 195 ASN 195 192 192 ASN ASN A . n A 1 196 ILE 196 193 193 ILE ILE A . n A 1 197 VAL 197 194 194 VAL VAL A . n A 1 198 PRO 198 195 195 PRO PRO A . n A 1 199 LYS 199 196 196 LYS LYS A . n A 1 200 GLY 200 197 197 GLY GLY A . n A 1 201 VAL 201 198 198 VAL VAL A . n A 1 202 SER 202 199 199 SER SER A . n A 1 203 LYS 203 200 200 LYS LYS A . n A 1 204 GLU 204 201 201 GLU GLU A . n A 1 205 ALA 205 202 202 ALA ALA A . n A 1 206 GLY 206 203 203 GLY GLY A . n A 1 207 LEU 207 204 204 LEU LEU A . n A 1 208 ALA 208 205 205 ALA ALA A . n A 1 209 LEU 209 206 206 LEU LEU A . n A 1 210 VAL 210 207 207 VAL VAL A . n A 1 211 ALA 211 208 208 ALA ALA A . n A 1 212 SER 212 209 209 SER SER A . n A 1 213 GLU 213 210 210 GLU GLU A . n A 1 214 LEU 214 211 211 LEU LEU A . n A 1 215 GLY 215 212 212 GLY GLY A . n A 1 216 LEU 216 213 213 LEU LEU A . n A 1 217 SER 217 214 214 SER SER A . n A 1 218 MSE 218 215 215 MSE MSE A . n A 1 219 ASP 219 216 216 ASP ASP A . n A 1 220 ASP 220 217 217 ASP ASP A . n A 1 221 VAL 221 218 218 VAL VAL A . n A 1 222 VAL 222 219 219 VAL VAL A . n A 1 223 ALA 223 220 220 ALA ALA A . n A 1 224 ILE 224 221 221 ILE ILE A . n A 1 225 GLY 225 222 222 GLY GLY A . n A 1 226 HIS 226 223 223 HIS HIS A . n A 1 227 GLN 227 224 224 GLN GLN A . n A 1 228 TYR 228 225 225 TYR TYR A . n A 1 229 ASP 229 226 226 ASP ASP A . n A 1 230 ASP 230 227 227 ASP ASP A . n A 1 231 LEU 231 228 228 LEU LEU A . n A 1 232 PRO 232 229 229 PRO PRO A . n A 1 233 MSE 233 230 230 MSE MSE A . n A 1 234 ILE 234 231 231 ILE ILE A . n A 1 235 GLU 235 232 232 GLU GLU A . n A 1 236 LEU 236 233 233 LEU LEU A . n A 1 237 ALA 237 234 234 ALA ALA A . n A 1 238 GLY 238 235 235 GLY GLY A . n A 1 239 LEU 239 236 236 LEU LEU A . n A 1 240 GLY 240 237 237 GLY GLY A . n A 1 241 VAL 241 238 238 VAL VAL A . n A 1 242 ALA 242 239 239 ALA ALA A . n A 1 243 MSE 243 240 240 MSE MSE A . n A 1 244 GLY 244 241 241 GLY GLY A . n A 1 245 ASN 245 242 242 ASN ASN A . n A 1 246 ALA 246 243 243 ALA ALA A . n A 1 247 VAL 247 244 244 VAL VAL A . n A 1 248 PRO 248 245 245 PRO PRO A . n A 1 249 GLU 249 246 246 GLU GLU A . n A 1 250 ILE 250 247 247 ILE ILE A . n A 1 251 LYS 251 248 248 LYS LYS A . n A 1 252 ARG 252 249 249 ARG ARG A . n A 1 253 LYS 253 250 250 LYS LYS A . n A 1 254 ALA 254 251 251 ALA ALA A . n A 1 255 ASP 255 252 252 ASP ASP A . n A 1 256 TRP 256 253 253 TRP TRP A . n A 1 257 VAL 257 254 254 VAL VAL A . n A 1 258 THR 258 255 255 THR THR A . n A 1 259 ARG 259 256 256 ARG ARG A . n A 1 260 SER 260 257 257 SER SER A . n A 1 261 ASN 261 258 258 ASN ASN A . n A 1 262 ASP 262 259 259 ASP ASP A . n A 1 263 GLU 263 260 260 GLU GLU A . n A 1 264 GLN 264 261 261 GLN GLN A . n A 1 265 GLY 265 262 262 GLY GLY A . n A 1 266 VAL 266 263 263 VAL VAL A . n A 1 267 ALA 267 264 264 ALA ALA A . n A 1 268 TYR 268 265 265 TYR TYR A . n A 1 269 MSE 269 266 266 MSE MSE A . n A 1 270 MSE 270 267 267 MSE MSE A . n A 1 271 LYS 271 268 268 LYS LYS A . n A 1 272 GLU 272 269 269 GLU GLU A . n A 1 273 TYR 273 270 270 TYR TYR A . n A 1 274 PHE 274 271 271 PHE PHE A . n A 1 275 ARG 275 272 272 ARG ARG A . n A 1 276 MSE 276 273 273 MSE MSE A . n A 1 277 GLN 277 274 274 GLN GLN A . n A 1 278 GLN 278 275 275 GLN GLN A . n A 1 279 ARG 279 276 276 ARG ARG A . n A 1 280 LYS 280 277 277 LYS ALA A . n A 1 281 GLY 281 278 ? ? ? A . n A 1 282 PHE 282 279 ? ? ? A . n A 1 283 LEU 283 280 ? ? ? A . n A 1 284 ASP 284 281 ? ? ? A . n A 1 285 LYS 285 282 ? ? ? A . n A 1 286 PHE 286 283 ? ? ? A . n A 1 287 HIS 287 284 ? ? ? A . n A 1 288 MSE 288 285 ? ? ? A . n A 1 289 LYS 289 286 ? ? ? A . n A 1 290 ARG 290 287 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 301 301 MG MG A . C 3 EDO 1 302 302 EDO EDO A . D 4 HOH 1 303 1 HOH HOH A . D 4 HOH 2 304 2 HOH HOH A . D 4 HOH 3 305 3 HOH HOH A . D 4 HOH 4 306 4 HOH HOH A . D 4 HOH 5 307 5 HOH HOH A . D 4 HOH 6 308 6 HOH HOH A . D 4 HOH 7 309 7 HOH HOH A . D 4 HOH 8 310 8 HOH HOH A . D 4 HOH 9 311 9 HOH HOH A . D 4 HOH 10 312 10 HOH HOH A . D 4 HOH 11 313 11 HOH HOH A . D 4 HOH 12 314 12 HOH HOH A . D 4 HOH 13 315 13 HOH HOH A . D 4 HOH 14 316 14 HOH HOH A . D 4 HOH 15 317 15 HOH HOH A . D 4 HOH 16 318 16 HOH HOH A . D 4 HOH 17 319 17 HOH HOH A . D 4 HOH 18 320 18 HOH HOH A . D 4 HOH 19 321 19 HOH HOH A . D 4 HOH 20 322 20 HOH HOH A . D 4 HOH 21 323 21 HOH HOH A . D 4 HOH 22 324 22 HOH HOH A . D 4 HOH 23 325 23 HOH HOH A . D 4 HOH 24 326 24 HOH HOH A . D 4 HOH 25 327 25 HOH HOH A . D 4 HOH 26 328 26 HOH HOH A . D 4 HOH 27 329 27 HOH HOH A . D 4 HOH 28 330 28 HOH HOH A . D 4 HOH 29 331 29 HOH HOH A . D 4 HOH 30 332 30 HOH HOH A . D 4 HOH 31 333 31 HOH HOH A . D 4 HOH 32 334 32 HOH HOH A . D 4 HOH 33 335 33 HOH HOH A . D 4 HOH 34 336 34 HOH HOH A . D 4 HOH 35 337 35 HOH HOH A . D 4 HOH 36 338 36 HOH HOH A . D 4 HOH 37 339 37 HOH HOH A . D 4 HOH 38 340 38 HOH HOH A . D 4 HOH 39 341 39 HOH HOH A . D 4 HOH 40 342 40 HOH HOH A . D 4 HOH 41 343 41 HOH HOH A . D 4 HOH 42 344 42 HOH HOH A . D 4 HOH 43 345 43 HOH HOH A . D 4 HOH 44 346 44 HOH HOH A . D 4 HOH 45 347 45 HOH HOH A . D 4 HOH 46 348 46 HOH HOH A . D 4 HOH 47 349 47 HOH HOH A . D 4 HOH 48 350 48 HOH HOH A . D 4 HOH 49 351 49 HOH HOH A . D 4 HOH 50 352 50 HOH HOH A . D 4 HOH 51 353 51 HOH HOH A . D 4 HOH 52 354 52 HOH HOH A . D 4 HOH 53 355 53 HOH HOH A . D 4 HOH 54 356 54 HOH HOH A . D 4 HOH 55 357 55 HOH HOH A . D 4 HOH 56 358 56 HOH HOH A . D 4 HOH 57 359 57 HOH HOH A . D 4 HOH 58 360 58 HOH HOH A . D 4 HOH 59 361 59 HOH HOH A . D 4 HOH 60 362 60 HOH HOH A . D 4 HOH 61 363 61 HOH HOH A . D 4 HOH 62 364 62 HOH HOH A . D 4 HOH 63 365 63 HOH HOH A . D 4 HOH 64 366 64 HOH HOH A . D 4 HOH 65 367 65 HOH HOH A . D 4 HOH 66 368 66 HOH HOH A . D 4 HOH 67 369 67 HOH HOH A . D 4 HOH 68 370 68 HOH HOH A . D 4 HOH 69 371 69 HOH HOH A . D 4 HOH 70 372 70 HOH HOH A . D 4 HOH 71 373 71 HOH HOH A . D 4 HOH 72 374 72 HOH HOH A . D 4 HOH 73 375 73 HOH HOH A . D 4 HOH 74 376 74 HOH HOH A . D 4 HOH 75 377 75 HOH HOH A . D 4 HOH 76 378 76 HOH HOH A . D 4 HOH 77 379 77 HOH HOH A . D 4 HOH 78 380 78 HOH HOH A . D 4 HOH 79 381 79 HOH HOH A . D 4 HOH 80 382 80 HOH HOH A . D 4 HOH 81 383 81 HOH HOH A . D 4 HOH 82 384 82 HOH HOH A . D 4 HOH 83 385 83 HOH HOH A . D 4 HOH 84 386 84 HOH HOH A . D 4 HOH 85 387 85 HOH HOH A . D 4 HOH 86 388 86 HOH HOH A . D 4 HOH 87 389 87 HOH HOH A . D 4 HOH 88 390 88 HOH HOH A . D 4 HOH 89 391 89 HOH HOH A . D 4 HOH 90 392 90 HOH HOH A . D 4 HOH 91 393 91 HOH HOH A . D 4 HOH 92 394 92 HOH HOH A . D 4 HOH 93 395 93 HOH HOH A . D 4 HOH 94 396 94 HOH HOH A . D 4 HOH 95 397 95 HOH HOH A . D 4 HOH 96 398 96 HOH HOH A . D 4 HOH 97 399 97 HOH HOH A . D 4 HOH 98 400 98 HOH HOH A . D 4 HOH 99 401 99 HOH HOH A . D 4 HOH 100 402 100 HOH HOH A . D 4 HOH 101 403 101 HOH HOH A . D 4 HOH 102 404 102 HOH HOH A . D 4 HOH 103 405 103 HOH HOH A . D 4 HOH 104 406 104 HOH HOH A . D 4 HOH 105 407 105 HOH HOH A . D 4 HOH 106 408 106 HOH HOH A . D 4 HOH 107 409 107 HOH HOH A . D 4 HOH 108 410 108 HOH HOH A . D 4 HOH 109 411 109 HOH HOH A . D 4 HOH 110 412 110 HOH HOH A . D 4 HOH 111 413 111 HOH HOH A . D 4 HOH 112 414 112 HOH HOH A . D 4 HOH 113 415 113 HOH HOH A . D 4 HOH 114 416 114 HOH HOH A . D 4 HOH 115 417 115 HOH HOH A . D 4 HOH 116 418 116 HOH HOH A . D 4 HOH 117 419 117 HOH HOH A . D 4 HOH 118 420 118 HOH HOH A . D 4 HOH 119 421 119 HOH HOH A . D 4 HOH 120 422 120 HOH HOH A . D 4 HOH 121 423 121 HOH HOH A . D 4 HOH 122 424 122 HOH HOH A . D 4 HOH 123 425 123 HOH HOH A . D 4 HOH 124 426 124 HOH HOH A . D 4 HOH 125 427 125 HOH HOH A . D 4 HOH 126 428 126 HOH HOH A . D 4 HOH 127 429 127 HOH HOH A . D 4 HOH 128 430 128 HOH HOH A . D 4 HOH 129 431 129 HOH HOH A . D 4 HOH 130 432 130 HOH HOH A . D 4 HOH 131 433 131 HOH HOH A . D 4 HOH 132 434 132 HOH HOH A . D 4 HOH 133 435 133 HOH HOH A . D 4 HOH 134 436 134 HOH HOH A . D 4 HOH 135 437 135 HOH HOH A . D 4 HOH 136 438 136 HOH HOH A . D 4 HOH 137 439 137 HOH HOH A . D 4 HOH 138 440 138 HOH HOH A . D 4 HOH 139 441 139 HOH HOH A . D 4 HOH 140 442 140 HOH HOH A . D 4 HOH 141 443 141 HOH HOH A . D 4 HOH 142 444 142 HOH HOH A . D 4 HOH 143 445 143 HOH HOH A . D 4 HOH 144 446 144 HOH HOH A . D 4 HOH 145 447 145 HOH HOH A . D 4 HOH 146 448 146 HOH HOH A . D 4 HOH 147 449 147 HOH HOH A . D 4 HOH 148 450 148 HOH HOH A . D 4 HOH 149 451 149 HOH HOH A . D 4 HOH 150 452 150 HOH HOH A . D 4 HOH 151 453 151 HOH HOH A . D 4 HOH 152 454 152 HOH HOH A . D 4 HOH 153 455 153 HOH HOH A . D 4 HOH 154 456 154 HOH HOH A . D 4 HOH 155 457 155 HOH HOH A . D 4 HOH 156 458 156 HOH HOH A . D 4 HOH 157 459 157 HOH HOH A . D 4 HOH 158 460 158 HOH HOH A . D 4 HOH 159 461 159 HOH HOH A . D 4 HOH 160 462 160 HOH HOH A . D 4 HOH 161 463 161 HOH HOH A . D 4 HOH 162 464 162 HOH HOH A . D 4 HOH 163 465 163 HOH HOH A . D 4 HOH 164 466 164 HOH HOH A . D 4 HOH 165 467 165 HOH HOH A . D 4 HOH 166 468 166 HOH HOH A . D 4 HOH 167 469 167 HOH HOH A . D 4 HOH 168 470 168 HOH HOH A . D 4 HOH 169 471 169 HOH HOH A . D 4 HOH 170 472 170 HOH HOH A . D 4 HOH 171 473 171 HOH HOH A . D 4 HOH 172 474 172 HOH HOH A . D 4 HOH 173 475 173 HOH HOH A . D 4 HOH 174 476 174 HOH HOH A . D 4 HOH 175 477 175 HOH HOH A . D 4 HOH 176 478 176 HOH HOH A . D 4 HOH 177 479 177 HOH HOH A . D 4 HOH 178 480 178 HOH HOH A . D 4 HOH 179 481 179 HOH HOH A . D 4 HOH 180 482 180 HOH HOH A . D 4 HOH 181 483 181 HOH HOH A . D 4 HOH 182 484 182 HOH HOH A . D 4 HOH 183 485 183 HOH HOH A . D 4 HOH 184 486 184 HOH HOH A . D 4 HOH 185 487 185 HOH HOH A . D 4 HOH 186 488 186 HOH HOH A . D 4 HOH 187 489 187 HOH HOH A . D 4 HOH 188 490 188 HOH HOH A . D 4 HOH 189 491 189 HOH HOH A . D 4 HOH 190 492 190 HOH HOH A . D 4 HOH 191 493 191 HOH HOH A . D 4 HOH 192 494 192 HOH HOH A . D 4 HOH 193 495 193 HOH HOH A . D 4 HOH 194 496 194 HOH HOH A . D 4 HOH 195 497 195 HOH HOH A . D 4 HOH 196 498 196 HOH HOH A . D 4 HOH 197 499 197 HOH HOH A . D 4 HOH 198 500 198 HOH HOH A . D 4 HOH 199 501 199 HOH HOH A . D 4 HOH 200 502 200 HOH HOH A . D 4 HOH 201 503 201 HOH HOH A . D 4 HOH 202 504 202 HOH HOH A . D 4 HOH 203 505 203 HOH HOH A . D 4 HOH 204 506 204 HOH HOH A . D 4 HOH 205 507 205 HOH HOH A . D 4 HOH 206 508 206 HOH HOH A . D 4 HOH 207 509 207 HOH HOH A . D 4 HOH 208 510 208 HOH HOH A . D 4 HOH 209 511 209 HOH HOH A . D 4 HOH 210 512 210 HOH HOH A . D 4 HOH 211 513 211 HOH HOH A . D 4 HOH 212 514 212 HOH HOH A . D 4 HOH 213 515 213 HOH HOH A . D 4 HOH 214 516 214 HOH HOH A . D 4 HOH 215 517 215 HOH HOH A . D 4 HOH 216 518 216 HOH HOH A . D 4 HOH 217 519 217 HOH HOH A . D 4 HOH 218 520 218 HOH HOH A . D 4 HOH 219 521 219 HOH HOH A . D 4 HOH 220 522 220 HOH HOH A . D 4 HOH 221 523 221 HOH HOH A . D 4 HOH 222 524 222 HOH HOH A . D 4 HOH 223 525 223 HOH HOH A . D 4 HOH 224 526 224 HOH HOH A . D 4 HOH 225 527 225 HOH HOH A . D 4 HOH 226 528 226 HOH HOH A . D 4 HOH 227 529 227 HOH HOH A . D 4 HOH 228 530 228 HOH HOH A . D 4 HOH 229 531 229 HOH HOH A . D 4 HOH 230 532 230 HOH HOH A . D 4 HOH 231 533 231 HOH HOH A . D 4 HOH 232 534 232 HOH HOH A . D 4 HOH 233 535 233 HOH HOH A . D 4 HOH 234 536 234 HOH HOH A . D 4 HOH 235 537 235 HOH HOH A . D 4 HOH 236 538 236 HOH HOH A . D 4 HOH 237 539 237 HOH HOH A . D 4 HOH 238 540 238 HOH HOH A . D 4 HOH 239 541 239 HOH HOH A . D 4 HOH 240 542 240 HOH HOH A . D 4 HOH 241 543 241 HOH HOH A . D 4 HOH 242 544 242 HOH HOH A . D 4 HOH 243 545 243 HOH HOH A . D 4 HOH 244 546 244 HOH HOH A . D 4 HOH 245 547 245 HOH HOH A . D 4 HOH 246 548 246 HOH HOH A . D 4 HOH 247 549 247 HOH HOH A . D 4 HOH 248 550 248 HOH HOH A . D 4 HOH 249 551 249 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 152 A MSE 149 ? MET SELENOMETHIONINE 2 A MSE 218 A MSE 215 ? MET SELENOMETHIONINE 3 A MSE 233 A MSE 230 ? MET SELENOMETHIONINE 4 A MSE 243 A MSE 240 ? MET SELENOMETHIONINE 5 A MSE 269 A MSE 266 ? MET SELENOMETHIONINE 6 A MSE 270 A MSE 267 ? MET SELENOMETHIONINE 7 A MSE 276 A MSE 273 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2400 ? 1 MORE 3 ? 1 'SSA (A^2)' 23780 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 161.4850000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id MG _pdbx_struct_special_symmetry.auth_seq_id 301 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id MG _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? D HOH . ? A HOH 468 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? D HOH . ? A HOH 467 ? 1_555 94.4 ? 2 O ? D HOH . ? A HOH 468 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? D HOH . ? A HOH 469 ? 1_555 75.4 ? 3 O ? D HOH . ? A HOH 467 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? D HOH . ? A HOH 469 ? 1_555 90.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-29 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 39.1534 23.6437 63.8024 -0.0181 -0.0473 -0.0318 -0.0052 0.0062 -0.0385 1.5386 1.0686 1.1870 -0.6300 -0.7456 0.4974 0.0537 -0.0920 0.0383 0.1508 -0.0175 0.1013 -0.1220 -0.0576 -0.1289 'X-RAY DIFFRACTION' 2 ? refined 48.8828 24.1107 85.3048 -0.0187 -0.0386 -0.0468 0.0355 -0.0017 -0.0220 1.2062 2.1385 1.6310 -0.3760 0.1242 0.5488 -0.0425 0.0643 -0.0218 -0.0466 -0.0056 -0.2357 0.1939 0.2178 0.1587 'X-RAY DIFFRACTION' 3 ? refined 39.6282 10.7887 68.0160 -0.0092 -0.1133 0.0147 -0.0232 0.0600 -0.0559 1.3786 1.4451 2.2965 -0.0902 -0.1112 0.4870 -0.0894 -0.0423 0.1317 0.0409 -0.2534 0.1533 0.1822 0.2642 -0.0262 'X-RAY DIFFRACTION' 4 ? refined 49.3582 11.2803 55.6968 -0.0121 -0.0435 -0.0015 -0.0051 0.0335 -0.0528 2.2884 2.2345 1.5051 -0.7959 -0.5131 0.9911 0.0080 -0.1045 0.0964 0.2154 -0.2218 0.1755 -0.1084 0.0136 -0.0927 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A A 82 ? 3 A 6 A 85 'X-RAY DIFFRACTION' ? 2 2 A A 196 ? 83 A 86 A 199 'X-RAY DIFFRACTION' ? 3 3 A A 235 ? 197 A 200 A 238 'X-RAY DIFFRACTION' ? 4 4 A A 277 ? 236 A 239 A 280 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 5 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 7 HKL-3000 . ? ? ? ? phasing ? ? ? 8 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 399 ? ? O A HOH 539 ? ? 2.07 2 1 NH2 A ARG 185 ? ? OD1 A ASP 188 ? ? 2.14 3 1 CD2 A TYR 161 ? B O A HOH 397 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 10 ? ? -88.14 -71.29 2 1 ALA A 13 ? ? -140.08 -75.38 3 1 ASP A 60 ? ? 39.41 58.61 4 1 TYR A 136 ? ? -156.22 70.51 5 1 HIS A 223 ? ? -147.38 -12.37 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 125 ? CG ? A LYS 128 CG 2 1 Y 1 A LYS 125 ? CD ? A LYS 128 CD 3 1 Y 1 A LYS 125 ? CE ? A LYS 128 CE 4 1 Y 1 A LYS 125 ? NZ ? A LYS 128 NZ 5 1 Y 1 A LYS 277 ? CG ? A LYS 280 CG 6 1 Y 1 A LYS 277 ? CD ? A LYS 280 CD 7 1 Y 1 A LYS 277 ? CE ? A LYS 280 CE 8 1 Y 1 A LYS 277 ? NZ ? A LYS 280 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A MSE 1 ? A MSE 4 5 1 Y 1 A SER 2 ? A SER 5 6 1 Y 1 A GLY 278 ? A GLY 281 7 1 Y 1 A PHE 279 ? A PHE 282 8 1 Y 1 A LEU 280 ? A LEU 283 9 1 Y 1 A ASP 281 ? A ASP 284 10 1 Y 1 A LYS 282 ? A LYS 285 11 1 Y 1 A PHE 283 ? A PHE 286 12 1 Y 1 A HIS 284 ? A HIS 287 13 1 Y 1 A MSE 285 ? A MSE 288 14 1 Y 1 A LYS 286 ? A LYS 289 15 1 Y 1 A ARG 287 ? A ARG 290 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 1,2-ETHANEDIOL EDO 4 water HOH #