data_3DOO # _entry.id 3DOO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DOO pdb_00003doo 10.2210/pdb3doo/pdb RCSB RCSB048298 ? ? WWPDB D_1000048298 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3DON _pdbx_database_related.details 'the same protein, apo form' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3DOO _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-07-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Han, C.' 1 'Hu, T.' 2 'Wu, D.' 3 'Zhou, J.' 4 'Shen, X.' 5 'Qu, D.' 6 'Jiang, H.' 7 # _citation.id primary _citation.title 'X-ray crystallographic and enzymatic analyses of shikimate dehydrogenase from Staphylococcus epidermidis' _citation.journal_abbrev 'Febs J.' _citation.journal_volume 276 _citation.page_first 1125 _citation.page_last 1139 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19215302 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2008.06856.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Han, C.' 1 ? primary 'Hu, T.' 2 ? primary 'Wu, D.' 3 ? primary 'Qu, S.' 4 ? primary 'Zhou, J.' 5 ? primary 'Ding, J.' 6 ? primary 'Shen, X.' 7 ? primary 'Qu, D.' 8 ? primary 'Jiang, H.' 9 ? # _cell.entry_id 3DOO _cell.length_a 45.189 _cell.length_b 52.529 _cell.length_c 56.777 _cell.angle_alpha 90.000 _cell.angle_beta 96.140 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DOO _symmetry.Int_Tables_number 4 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Shikimate dehydrogenase' 31050.281 1 1.1.1.25 ? ? ? 2 non-polymer syn '(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID' 174.151 1 ? ? ? ? 3 water nat water 18.015 151 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKFAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKS VGAVNTVLVKDGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN INKINLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVHQG AESFKIWTNLEPDIKAMKNIVIQKLKGELLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MKFAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKS VGAVNTVLVKDGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN INKINLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVHQG AESFKIWTNLEPDIKAMKNIVIQKLKGELLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 PHE n 1 4 ALA n 1 5 VAL n 1 6 ILE n 1 7 GLY n 1 8 ASN n 1 9 PRO n 1 10 ILE n 1 11 SER n 1 12 HIS n 1 13 SER n 1 14 LEU n 1 15 SER n 1 16 PRO n 1 17 LEU n 1 18 MET n 1 19 HIS n 1 20 HIS n 1 21 ALA n 1 22 ASN n 1 23 PHE n 1 24 GLN n 1 25 SER n 1 26 LEU n 1 27 ASN n 1 28 LEU n 1 29 GLU n 1 30 ASN n 1 31 THR n 1 32 TYR n 1 33 GLU n 1 34 ALA n 1 35 ILE n 1 36 ASN n 1 37 VAL n 1 38 PRO n 1 39 VAL n 1 40 ASN n 1 41 GLN n 1 42 PHE n 1 43 GLN n 1 44 ASP n 1 45 ILE n 1 46 LYS n 1 47 LYS n 1 48 ILE n 1 49 ILE n 1 50 SER n 1 51 GLU n 1 52 LYS n 1 53 SER n 1 54 ILE n 1 55 ASP n 1 56 GLY n 1 57 PHE n 1 58 ASN n 1 59 VAL n 1 60 THR n 1 61 ILE n 1 62 PRO n 1 63 HIS n 1 64 LYS n 1 65 GLU n 1 66 ARG n 1 67 ILE n 1 68 ILE n 1 69 PRO n 1 70 TYR n 1 71 LEU n 1 72 ASP n 1 73 ASP n 1 74 ILE n 1 75 ASN n 1 76 GLU n 1 77 GLN n 1 78 ALA n 1 79 LYS n 1 80 SER n 1 81 VAL n 1 82 GLY n 1 83 ALA n 1 84 VAL n 1 85 ASN n 1 86 THR n 1 87 VAL n 1 88 LEU n 1 89 VAL n 1 90 LYS n 1 91 ASP n 1 92 GLY n 1 93 LYS n 1 94 TRP n 1 95 ILE n 1 96 GLY n 1 97 TYR n 1 98 ASN n 1 99 THR n 1 100 ASP n 1 101 GLY n 1 102 ILE n 1 103 GLY n 1 104 TYR n 1 105 VAL n 1 106 ASN n 1 107 GLY n 1 108 LEU n 1 109 LYS n 1 110 GLN n 1 111 ILE n 1 112 TYR n 1 113 GLU n 1 114 GLY n 1 115 ILE n 1 116 GLU n 1 117 ASP n 1 118 ALA n 1 119 TYR n 1 120 ILE n 1 121 LEU n 1 122 ILE n 1 123 LEU n 1 124 GLY n 1 125 ALA n 1 126 GLY n 1 127 GLY n 1 128 ALA n 1 129 SER n 1 130 LYS n 1 131 GLY n 1 132 ILE n 1 133 ALA n 1 134 ASN n 1 135 GLU n 1 136 LEU n 1 137 TYR n 1 138 LYS n 1 139 ILE n 1 140 VAL n 1 141 ARG n 1 142 PRO n 1 143 THR n 1 144 LEU n 1 145 THR n 1 146 VAL n 1 147 ALA n 1 148 ASN n 1 149 ARG n 1 150 THR n 1 151 MET n 1 152 SER n 1 153 ARG n 1 154 PHE n 1 155 ASN n 1 156 ASN n 1 157 TRP n 1 158 SER n 1 159 LEU n 1 160 ASN n 1 161 ILE n 1 162 ASN n 1 163 LYS n 1 164 ILE n 1 165 ASN n 1 166 LEU n 1 167 SER n 1 168 HIS n 1 169 ALA n 1 170 GLU n 1 171 SER n 1 172 HIS n 1 173 LEU n 1 174 ASP n 1 175 GLU n 1 176 PHE n 1 177 ASP n 1 178 ILE n 1 179 ILE n 1 180 ILE n 1 181 ASN n 1 182 THR n 1 183 THR n 1 184 PRO n 1 185 ALA n 1 186 GLY n 1 187 MET n 1 188 ASN n 1 189 GLY n 1 190 ASN n 1 191 THR n 1 192 ASP n 1 193 SER n 1 194 VAL n 1 195 ILE n 1 196 SER n 1 197 LEU n 1 198 ASN n 1 199 ARG n 1 200 LEU n 1 201 ALA n 1 202 SER n 1 203 HIS n 1 204 THR n 1 205 LEU n 1 206 VAL n 1 207 SER n 1 208 ASP n 1 209 ILE n 1 210 VAL n 1 211 TYR n 1 212 ASN n 1 213 PRO n 1 214 TYR n 1 215 LYS n 1 216 THR n 1 217 PRO n 1 218 ILE n 1 219 LEU n 1 220 ILE n 1 221 GLU n 1 222 ALA n 1 223 GLU n 1 224 GLN n 1 225 ARG n 1 226 GLY n 1 227 ASN n 1 228 PRO n 1 229 ILE n 1 230 TYR n 1 231 ASN n 1 232 GLY n 1 233 LEU n 1 234 ASP n 1 235 MET n 1 236 PHE n 1 237 VAL n 1 238 HIS n 1 239 GLN n 1 240 GLY n 1 241 ALA n 1 242 GLU n 1 243 SER n 1 244 PHE n 1 245 LYS n 1 246 ILE n 1 247 TRP n 1 248 THR n 1 249 ASN n 1 250 LEU n 1 251 GLU n 1 252 PRO n 1 253 ASP n 1 254 ILE n 1 255 LYS n 1 256 ALA n 1 257 MET n 1 258 LYS n 1 259 ASN n 1 260 ILE n 1 261 VAL n 1 262 ILE n 1 263 GLN n 1 264 LYS n 1 265 LEU n 1 266 LYS n 1 267 GLY n 1 268 GLU n 1 269 LEU n 1 270 LEU n 1 271 GLU n 1 272 HIS n 1 273 HIS n 1 274 HIS n 1 275 HIS n 1 276 HIS n 1 277 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene aroE _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RP62A _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus epidermidis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 176279 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AROE_STAEQ _struct_ref.pdbx_db_accession Q5HNV1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKFAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKS VGAVNTVLVKDGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN INKINLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVHQG AESFKIWTNLEPDIKAMKNIVIQKLKGEL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DOO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 269 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5HNV1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 269 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 269 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DOO LEU A 270 ? UNP Q5HNV1 ? ? 'expression tag' 270 1 1 3DOO GLU A 271 ? UNP Q5HNV1 ? ? 'expression tag' 271 2 1 3DOO HIS A 272 ? UNP Q5HNV1 ? ? 'expression tag' 272 3 1 3DOO HIS A 273 ? UNP Q5HNV1 ? ? 'expression tag' 273 4 1 3DOO HIS A 274 ? UNP Q5HNV1 ? ? 'expression tag' 274 5 1 3DOO HIS A 275 ? UNP Q5HNV1 ? ? 'expression tag' 275 6 1 3DOO HIS A 276 ? UNP Q5HNV1 ? ? 'expression tag' 276 7 1 3DOO HIS A 277 ? UNP Q5HNV1 ? ? 'expression tag' 277 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SKM non-polymer . '(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID' SHIKIMATE 'C7 H10 O5' 174.151 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3DOO _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.790 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 43.00 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M Sodium Cacodylate pH 6.5, 23% PEG 8000, 0.2M Ammonium Sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2008-03-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3DOO _reflns.d_resolution_high 2.200 _reflns.d_resolution_low 28.230 _reflns.number_obs 13476 _reflns.pdbx_scaling_rejects 2505 _reflns.pdbx_Rmerge_I_obs 0.122 _reflns.pdbx_netI_over_sigmaI 5.200 _reflns.pdbx_chi_squared 1.320 _reflns.pdbx_redundancy 3.520 _reflns.percent_possible_obs 99.200 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.20 2.28 ? 4674 ? 0.380 1.9 ? 1.020 3.45 ? 1347 99.60 ? 1 2.28 2.37 ? 4909 ? 0.364 2.1 ? 1.110 3.64 ? 1340 99.90 ? 2 2.37 2.48 ? 4956 ? 0.332 2.3 ? 1.150 3.62 ? 1352 99.80 ? 3 2.48 2.61 ? 4956 ? 0.304 2.5 ? 1.170 3.63 ? 1343 99.90 ? 4 2.61 2.77 ? 4977 ? 0.250 3.0 ? 1.190 3.61 ? 1345 99.90 ? 5 2.77 2.99 ? 5120 ? 0.215 3.5 ? 1.360 3.61 ? 1377 99.90 ? 6 2.99 3.29 ? 4983 ? 0.153 4.9 ? 1.600 3.53 ? 1337 99.90 ? 7 3.29 3.76 ? 5070 ? 0.095 7.5 ? 1.690 3.41 ? 1347 99.40 ? 8 3.76 4.73 ? 5124 ? 0.059 11.9 ? 1.530 3.41 ? 1355 98.90 ? 9 4.73 28.23 ? 5155 ? 0.046 14.2 ? 1.400 3.29 ? 1333 95.00 ? 10 # _refine.entry_id 3DOO _refine.ls_d_res_high 2.200 _refine.ls_d_res_low 15.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.380 _refine.ls_number_reflns_obs 13461 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.192 _refine.ls_R_factor_R_work 0.188 _refine.ls_R_factor_R_free 0.264 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 668 _refine.B_iso_mean 28.345 _refine.aniso_B[1][1] -1.000 _refine.aniso_B[2][2] 1.530 _refine.aniso_B[3][3] -0.580 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.220 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.889 _refine.pdbx_overall_ESU_R 0.312 _refine.pdbx_overall_ESU_R_Free 0.246 _refine.overall_SU_ML 0.193 _refine.overall_SU_B 7.563 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.B_iso_max 55.43 _refine.B_iso_min 2.00 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB ENTRY 3DON' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2036 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 2199 _refine_hist.d_res_high 2.200 _refine_hist.d_res_low 15.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2089 0.025 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2835 2.082 1.957 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 256 6.828 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 94 42.752 25.638 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 367 18.819 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 21.144 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 326 0.138 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1556 0.009 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 1022 0.239 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1446 0.314 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 119 0.210 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 34 0.256 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 9 0.171 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1331 1.206 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2086 1.937 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 873 3.076 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 749 4.603 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.256 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.800 _refine_ls_shell.number_reflns_R_work 935 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.218 _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 983 _refine_ls_shell.number_reflns_obs 983 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DOO _struct.title 'Crystal structure of shikimate dehydrogenase from Staphylococcus epidermidis complexed with shikimate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DOO _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'alpha-beta structure, Rossmann fold, Amino-acid biosynthesis, Aromatic amino acid biosynthesis, NADP, Oxidoreductase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 14 ? LEU A 26 ? LEU A 14 LEU A 26 1 ? 13 HELX_P HELX_P2 2 PRO A 38 ? GLN A 43 ? PRO A 38 GLN A 43 5 ? 6 HELX_P HELX_P3 3 ASP A 44 ? GLU A 51 ? ASP A 44 GLU A 51 1 ? 8 HELX_P HELX_P4 4 ILE A 67 ? LEU A 71 ? ILE A 67 LEU A 71 5 ? 5 HELX_P HELX_P5 5 ASN A 75 ? GLY A 82 ? ASN A 75 GLY A 82 1 ? 8 HELX_P HELX_P6 6 THR A 99 ? ILE A 111 ? THR A 99 ILE A 111 1 ? 13 HELX_P HELX_P7 7 GLY A 114 ? ALA A 118 ? GLY A 114 ALA A 118 5 ? 5 HELX_P HELX_P8 8 GLY A 126 ? LYS A 138 ? GLY A 126 LYS A 138 1 ? 13 HELX_P HELX_P9 9 THR A 150 ? ASN A 155 ? THR A 150 ASN A 155 5 ? 6 HELX_P HELX_P10 10 LEU A 166 ? HIS A 172 ? LEU A 166 HIS A 172 1 ? 7 HELX_P HELX_P11 11 LEU A 173 ? PHE A 176 ? LEU A 173 PHE A 176 5 ? 4 HELX_P HELX_P12 12 THR A 216 ? ARG A 225 ? THR A 216 ARG A 225 1 ? 10 HELX_P HELX_P13 13 GLY A 232 ? ASN A 249 ? GLY A 232 ASN A 249 1 ? 18 HELX_P HELX_P14 14 ASP A 253 ? LYS A 266 ? ASP A 253 LYS A 266 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 8 A . ? ASN 8 A PRO 9 A ? PRO 9 A 1 -2.97 2 ILE 61 A . ? ILE 61 A PRO 62 A ? PRO 62 A 1 -2.89 3 ASN 212 A . ? ASN 212 A PRO 213 A ? PRO 213 A 1 7.18 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 31 ? ASN A 36 ? THR A 31 ASN A 36 A 2 LYS A 2 ? GLY A 7 ? LYS A 2 GLY A 7 A 3 GLY A 56 ? VAL A 59 ? GLY A 56 VAL A 59 A 4 THR A 86 ? LYS A 90 ? THR A 86 LYS A 90 A 5 LYS A 93 ? TYR A 97 ? LYS A 93 TYR A 97 A 6 ASP A 73 ? ILE A 74 ? ASP A 73 ILE A 74 B 1 ASN A 162 ? ASN A 165 ? ASN A 162 ASN A 165 B 2 THR A 145 ? ASN A 148 ? THR A 145 ASN A 148 B 3 ILE A 120 ? LEU A 123 ? ILE A 120 LEU A 123 B 4 ILE A 178 ? ASN A 181 ? ILE A 178 ASN A 181 B 5 LEU A 205 ? ASP A 208 ? LEU A 205 ASP A 208 B 6 ILE A 229 ? TYR A 230 ? ILE A 229 TYR A 230 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 35 ? O ILE A 35 N VAL A 5 ? N VAL A 5 A 2 3 N ALA A 4 ? N ALA A 4 O ASN A 58 ? O ASN A 58 A 3 4 N PHE A 57 ? N PHE A 57 O VAL A 87 ? O VAL A 87 A 4 5 N THR A 86 ? N THR A 86 O TYR A 97 ? O TYR A 97 A 5 6 O GLY A 96 ? O GLY A 96 N ASP A 73 ? N ASP A 73 B 1 2 O ASN A 162 ? O ASN A 162 N VAL A 146 ? N VAL A 146 B 2 3 O ALA A 147 ? O ALA A 147 N ILE A 122 ? N ILE A 122 B 3 4 N LEU A 123 ? N LEU A 123 O ILE A 180 ? O ILE A 180 B 4 5 N ILE A 179 ? N ILE A 179 O SER A 207 ? O SER A 207 B 5 6 N ASP A 208 ? N ASP A 208 O TYR A 230 ? O TYR A 230 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SKM _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE SKM A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 SER A 13 ? SER A 13 . ? 1_555 ? 2 AC1 10 SER A 15 ? SER A 15 . ? 1_555 ? 3 AC1 10 ASN A 58 ? ASN A 58 . ? 1_555 ? 4 AC1 10 THR A 60 ? THR A 60 . ? 1_555 ? 5 AC1 10 LYS A 64 ? LYS A 64 . ? 1_555 ? 6 AC1 10 ASN A 85 ? ASN A 85 . ? 1_555 ? 7 AC1 10 ASP A 100 ? ASP A 100 . ? 1_555 ? 8 AC1 10 PHE A 236 ? PHE A 236 . ? 1_555 ? 9 AC1 10 GLN A 239 ? GLN A 239 . ? 1_555 ? 10 AC1 10 HOH C . ? HOH A 350 . ? 1_555 ? # _atom_sites.entry_id 3DOO _atom_sites.fract_transf_matrix[1][1] 0.022129 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002380 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019037 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017714 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 HIS 20 20 20 HIS HIS A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 PHE 57 57 57 PHE PHE A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 TYR 112 112 112 TYR TYR A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 TYR 119 119 119 TYR TYR A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 THR 145 145 145 THR THR A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 MET 151 151 151 MET MET A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 ARG 153 153 153 ARG ARG A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 TRP 157 157 157 TRP TRP A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 ILE 164 164 164 ILE ILE A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 HIS 168 168 168 HIS HIS A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 HIS 172 172 172 HIS HIS A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 THR 182 182 182 THR THR A . n A 1 183 THR 183 183 183 THR THR A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 ALA 185 185 ? ? ? A . n A 1 186 GLY 186 186 ? ? ? A . n A 1 187 MET 187 187 ? ? ? A . n A 1 188 ASN 188 188 ? ? ? A . n A 1 189 GLY 189 189 ? ? ? A . n A 1 190 ASN 190 190 ? ? ? A . n A 1 191 THR 191 191 ? ? ? A . n A 1 192 ASP 192 192 ? ? ? A . n A 1 193 SER 193 193 ? ? ? A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 SER 196 196 196 SER SER A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 ASN 198 198 198 ASN ASN A . n A 1 199 ARG 199 199 199 ARG ARG A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 ALA 201 201 201 ALA ALA A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 THR 204 204 204 THR THR A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 VAL 206 206 206 VAL VAL A . n A 1 207 SER 207 207 207 SER SER A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 TYR 211 211 211 TYR TYR A . n A 1 212 ASN 212 212 212 ASN ASN A . n A 1 213 PRO 213 213 213 PRO PRO A . n A 1 214 TYR 214 214 214 TYR TYR A . n A 1 215 LYS 215 215 215 LYS LYS A . n A 1 216 THR 216 216 216 THR THR A . n A 1 217 PRO 217 217 217 PRO PRO A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 ILE 220 220 220 ILE ILE A . n A 1 221 GLU 221 221 221 GLU GLU A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 GLN 224 224 224 GLN GLN A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 ASN 227 227 227 ASN ASN A . n A 1 228 PRO 228 228 228 PRO PRO A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 TYR 230 230 230 TYR TYR A . n A 1 231 ASN 231 231 231 ASN ASN A . n A 1 232 GLY 232 232 232 GLY GLY A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 ASP 234 234 234 ASP ASP A . n A 1 235 MET 235 235 235 MET MET A . n A 1 236 PHE 236 236 236 PHE PHE A . n A 1 237 VAL 237 237 237 VAL VAL A . n A 1 238 HIS 238 238 238 HIS HIS A . n A 1 239 GLN 239 239 239 GLN GLN A . n A 1 240 GLY 240 240 240 GLY GLY A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 GLU 242 242 242 GLU GLU A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 PHE 244 244 244 PHE PHE A . n A 1 245 LYS 245 245 245 LYS LYS A . n A 1 246 ILE 246 246 246 ILE ILE A . n A 1 247 TRP 247 247 247 TRP TRP A . n A 1 248 THR 248 248 248 THR THR A . n A 1 249 ASN 249 249 249 ASN ASN A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 GLU 251 251 251 GLU GLU A . n A 1 252 PRO 252 252 252 PRO PRO A . n A 1 253 ASP 253 253 253 ASP ASP A . n A 1 254 ILE 254 254 254 ILE ILE A . n A 1 255 LYS 255 255 255 LYS LYS A . n A 1 256 ALA 256 256 256 ALA ALA A . n A 1 257 MET 257 257 257 MET MET A . n A 1 258 LYS 258 258 258 LYS LYS A . n A 1 259 ASN 259 259 259 ASN ASN A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 VAL 261 261 261 VAL VAL A . n A 1 262 ILE 262 262 262 ILE ILE A . n A 1 263 GLN 263 263 263 GLN GLN A . n A 1 264 LYS 264 264 264 LYS LYS A . n A 1 265 LEU 265 265 265 LEU LEU A . n A 1 266 LYS 266 266 266 LYS LYS A . n A 1 267 GLY 267 267 267 GLY GLY A . n A 1 268 GLU 268 268 ? ? ? A . n A 1 269 LEU 269 269 ? ? ? A . n A 1 270 LEU 270 270 ? ? ? A . n A 1 271 GLU 271 271 ? ? ? A . n A 1 272 HIS 272 272 ? ? ? A . n A 1 273 HIS 273 273 ? ? ? A . n A 1 274 HIS 274 274 ? ? ? A . n A 1 275 HIS 275 275 ? ? ? A . n A 1 276 HIS 276 276 ? ? ? A . n A 1 277 HIS 277 277 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SKM 1 300 300 SKM SKM A . C 3 HOH 1 301 1 HOH HOH A . C 3 HOH 2 302 2 HOH HOH A . C 3 HOH 3 303 3 HOH HOH A . C 3 HOH 4 304 4 HOH HOH A . C 3 HOH 5 305 5 HOH HOH A . C 3 HOH 6 306 6 HOH HOH A . C 3 HOH 7 307 7 HOH HOH A . C 3 HOH 8 308 8 HOH HOH A . C 3 HOH 9 309 9 HOH HOH A . C 3 HOH 10 310 10 HOH HOH A . C 3 HOH 11 311 11 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 13 HOH HOH A . C 3 HOH 14 314 14 HOH HOH A . C 3 HOH 15 315 15 HOH HOH A . C 3 HOH 16 316 16 HOH HOH A . C 3 HOH 17 317 17 HOH HOH A . C 3 HOH 18 318 18 HOH HOH A . C 3 HOH 19 319 19 HOH HOH A . C 3 HOH 20 320 20 HOH HOH A . C 3 HOH 21 321 21 HOH HOH A . C 3 HOH 22 322 22 HOH HOH A . C 3 HOH 23 323 23 HOH HOH A . C 3 HOH 24 324 24 HOH HOH A . C 3 HOH 25 325 25 HOH HOH A . C 3 HOH 26 326 26 HOH HOH A . C 3 HOH 27 327 27 HOH HOH A . C 3 HOH 28 328 28 HOH HOH A . C 3 HOH 29 329 29 HOH HOH A . C 3 HOH 30 330 30 HOH HOH A . C 3 HOH 31 331 31 HOH HOH A . C 3 HOH 32 332 32 HOH HOH A . C 3 HOH 33 333 33 HOH HOH A . C 3 HOH 34 334 34 HOH HOH A . C 3 HOH 35 335 35 HOH HOH A . C 3 HOH 36 336 36 HOH HOH A . C 3 HOH 37 337 37 HOH HOH A . C 3 HOH 38 338 38 HOH HOH A . C 3 HOH 39 339 39 HOH HOH A . C 3 HOH 40 340 40 HOH HOH A . C 3 HOH 41 341 41 HOH HOH A . C 3 HOH 42 342 42 HOH HOH A . C 3 HOH 43 343 43 HOH HOH A . C 3 HOH 44 344 44 HOH HOH A . C 3 HOH 45 345 45 HOH HOH A . C 3 HOH 46 346 46 HOH HOH A . C 3 HOH 47 347 47 HOH HOH A . C 3 HOH 48 348 48 HOH HOH A . C 3 HOH 49 349 49 HOH HOH A . C 3 HOH 50 350 50 HOH HOH A . C 3 HOH 51 351 51 HOH HOH A . C 3 HOH 52 352 52 HOH HOH A . C 3 HOH 53 353 53 HOH HOH A . C 3 HOH 54 354 54 HOH HOH A . C 3 HOH 55 355 55 HOH HOH A . C 3 HOH 56 356 56 HOH HOH A . C 3 HOH 57 357 57 HOH HOH A . C 3 HOH 58 358 59 HOH HOH A . C 3 HOH 59 359 60 HOH HOH A . C 3 HOH 60 360 61 HOH HOH A . C 3 HOH 61 361 62 HOH HOH A . C 3 HOH 62 362 63 HOH HOH A . C 3 HOH 63 363 64 HOH HOH A . C 3 HOH 64 364 65 HOH HOH A . C 3 HOH 65 365 66 HOH HOH A . C 3 HOH 66 366 67 HOH HOH A . C 3 HOH 67 367 68 HOH HOH A . C 3 HOH 68 368 69 HOH HOH A . C 3 HOH 69 369 70 HOH HOH A . C 3 HOH 70 370 71 HOH HOH A . C 3 HOH 71 371 72 HOH HOH A . C 3 HOH 72 372 73 HOH HOH A . C 3 HOH 73 373 74 HOH HOH A . C 3 HOH 74 374 75 HOH HOH A . C 3 HOH 75 375 76 HOH HOH A . C 3 HOH 76 376 77 HOH HOH A . C 3 HOH 77 377 78 HOH HOH A . C 3 HOH 78 378 79 HOH HOH A . C 3 HOH 79 379 80 HOH HOH A . C 3 HOH 80 380 81 HOH HOH A . C 3 HOH 81 381 82 HOH HOH A . C 3 HOH 82 382 84 HOH HOH A . C 3 HOH 83 383 85 HOH HOH A . C 3 HOH 84 384 86 HOH HOH A . C 3 HOH 85 385 87 HOH HOH A . C 3 HOH 86 386 89 HOH HOH A . C 3 HOH 87 387 90 HOH HOH A . C 3 HOH 88 388 91 HOH HOH A . C 3 HOH 89 389 92 HOH HOH A . C 3 HOH 90 390 93 HOH HOH A . C 3 HOH 91 391 94 HOH HOH A . C 3 HOH 92 392 96 HOH HOH A . C 3 HOH 93 393 98 HOH HOH A . C 3 HOH 94 394 99 HOH HOH A . C 3 HOH 95 395 100 HOH HOH A . C 3 HOH 96 396 101 HOH HOH A . C 3 HOH 97 397 102 HOH HOH A . C 3 HOH 98 398 103 HOH HOH A . C 3 HOH 99 399 104 HOH HOH A . C 3 HOH 100 400 105 HOH HOH A . C 3 HOH 101 401 106 HOH HOH A . C 3 HOH 102 402 108 HOH HOH A . C 3 HOH 103 403 109 HOH HOH A . C 3 HOH 104 404 110 HOH HOH A . C 3 HOH 105 405 111 HOH HOH A . C 3 HOH 106 406 112 HOH HOH A . C 3 HOH 107 407 113 HOH HOH A . C 3 HOH 108 408 114 HOH HOH A . C 3 HOH 109 409 115 HOH HOH A . C 3 HOH 110 410 116 HOH HOH A . C 3 HOH 111 411 117 HOH HOH A . C 3 HOH 112 412 118 HOH HOH A . C 3 HOH 113 413 119 HOH HOH A . C 3 HOH 114 414 120 HOH HOH A . C 3 HOH 115 415 121 HOH HOH A . C 3 HOH 116 416 122 HOH HOH A . C 3 HOH 117 417 123 HOH HOH A . C 3 HOH 118 418 124 HOH HOH A . C 3 HOH 119 419 125 HOH HOH A . C 3 HOH 120 420 126 HOH HOH A . C 3 HOH 121 421 127 HOH HOH A . C 3 HOH 122 422 128 HOH HOH A . C 3 HOH 123 423 130 HOH HOH A . C 3 HOH 124 424 131 HOH HOH A . C 3 HOH 125 425 132 HOH HOH A . C 3 HOH 126 426 133 HOH HOH A . C 3 HOH 127 427 134 HOH HOH A . C 3 HOH 128 428 135 HOH HOH A . C 3 HOH 129 429 136 HOH HOH A . C 3 HOH 130 430 137 HOH HOH A . C 3 HOH 131 431 138 HOH HOH A . C 3 HOH 132 432 139 HOH HOH A . C 3 HOH 133 433 140 HOH HOH A . C 3 HOH 134 434 141 HOH HOH A . C 3 HOH 135 435 142 HOH HOH A . C 3 HOH 136 436 143 HOH HOH A . C 3 HOH 137 437 144 HOH HOH A . C 3 HOH 138 438 145 HOH HOH A . C 3 HOH 139 439 146 HOH HOH A . C 3 HOH 140 440 148 HOH HOH A . C 3 HOH 141 441 150 HOH HOH A . C 3 HOH 142 442 151 HOH HOH A . C 3 HOH 143 443 152 HOH HOH A . C 3 HOH 144 444 154 HOH HOH A . C 3 HOH 145 445 155 HOH HOH A . C 3 HOH 146 446 156 HOH HOH A . C 3 HOH 147 447 157 HOH HOH A . C 3 HOH 148 448 158 HOH HOH A . C 3 HOH 149 449 160 HOH HOH A . C 3 HOH 150 450 161 HOH HOH A . C 3 HOH 151 451 162 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-11-12 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal d*TREK 7.1SSI 'May 1 2001' package 'Jim W. Pflugrath' Jim.Pflugrath@Rigaku.com 'data scaling' http://www.rigaku.com/software/dtrek.html ? ? 1 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 CNS . ? ? ? ? phasing ? ? ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 A ASN 156 ? ? O A HOH 326 ? ? 2.15 2 1 O A LEU 159 ? ? O A HOH 345 ? ? 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 MET _pdbx_validate_rmsd_angle.auth_seq_id_1 18 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 SD _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 MET _pdbx_validate_rmsd_angle.auth_seq_id_2 18 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 MET _pdbx_validate_rmsd_angle.auth_seq_id_3 18 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.63 _pdbx_validate_rmsd_angle.angle_target_value 100.20 _pdbx_validate_rmsd_angle.angle_deviation 10.43 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 137 ? ? -38.44 -35.07 2 1 ARG A 225 ? ? -49.66 -1.84 3 1 TYR A 230 ? ? -160.36 110.58 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 185 ? A ALA 185 2 1 Y 1 A GLY 186 ? A GLY 186 3 1 Y 1 A MET 187 ? A MET 187 4 1 Y 1 A ASN 188 ? A ASN 188 5 1 Y 1 A GLY 189 ? A GLY 189 6 1 Y 1 A ASN 190 ? A ASN 190 7 1 Y 1 A THR 191 ? A THR 191 8 1 Y 1 A ASP 192 ? A ASP 192 9 1 Y 1 A SER 193 ? A SER 193 10 1 Y 1 A GLU 268 ? A GLU 268 11 1 Y 1 A LEU 269 ? A LEU 269 12 1 Y 1 A LEU 270 ? A LEU 270 13 1 Y 1 A GLU 271 ? A GLU 271 14 1 Y 1 A HIS 272 ? A HIS 272 15 1 Y 1 A HIS 273 ? A HIS 273 16 1 Y 1 A HIS 274 ? A HIS 274 17 1 Y 1 A HIS 275 ? A HIS 275 18 1 Y 1 A HIS 276 ? A HIS 276 19 1 Y 1 A HIS 277 ? A HIS 277 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 SKM O12 O N N 290 SKM C8 C N S 291 SKM C6 C N R 292 SKM O7 O N N 293 SKM C5 C N N 294 SKM C4 C N N 295 SKM C1 C N N 296 SKM O2 O N N 297 SKM O3 O N N 298 SKM C10 C N N 299 SKM C9 C N R 300 SKM O11 O N N 301 SKM H12 H N N 302 SKM H8 H N N 303 SKM H6 H N N 304 SKM HO7 H N N 305 SKM H51 H N N 306 SKM H52 H N N 307 SKM HO2 H N N 308 SKM H10 H N N 309 SKM H9 H N N 310 SKM H11 H N N 311 THR N N N N 312 THR CA C N S 313 THR C C N N 314 THR O O N N 315 THR CB C N R 316 THR OG1 O N N 317 THR CG2 C N N 318 THR OXT O N N 319 THR H H N N 320 THR H2 H N N 321 THR HA H N N 322 THR HB H N N 323 THR HG1 H N N 324 THR HG21 H N N 325 THR HG22 H N N 326 THR HG23 H N N 327 THR HXT H N N 328 TRP N N N N 329 TRP CA C N S 330 TRP C C N N 331 TRP O O N N 332 TRP CB C N N 333 TRP CG C Y N 334 TRP CD1 C Y N 335 TRP CD2 C Y N 336 TRP NE1 N Y N 337 TRP CE2 C Y N 338 TRP CE3 C Y N 339 TRP CZ2 C Y N 340 TRP CZ3 C Y N 341 TRP CH2 C Y N 342 TRP OXT O N N 343 TRP H H N N 344 TRP H2 H N N 345 TRP HA H N N 346 TRP HB2 H N N 347 TRP HB3 H N N 348 TRP HD1 H N N 349 TRP HE1 H N N 350 TRP HE3 H N N 351 TRP HZ2 H N N 352 TRP HZ3 H N N 353 TRP HH2 H N N 354 TRP HXT H N N 355 TYR N N N N 356 TYR CA C N S 357 TYR C C N N 358 TYR O O N N 359 TYR CB C N N 360 TYR CG C Y N 361 TYR CD1 C Y N 362 TYR CD2 C Y N 363 TYR CE1 C Y N 364 TYR CE2 C Y N 365 TYR CZ C Y N 366 TYR OH O N N 367 TYR OXT O N N 368 TYR H H N N 369 TYR H2 H N N 370 TYR HA H N N 371 TYR HB2 H N N 372 TYR HB3 H N N 373 TYR HD1 H N N 374 TYR HD2 H N N 375 TYR HE1 H N N 376 TYR HE2 H N N 377 TYR HH H N N 378 TYR HXT H N N 379 VAL N N N N 380 VAL CA C N S 381 VAL C C N N 382 VAL O O N N 383 VAL CB C N N 384 VAL CG1 C N N 385 VAL CG2 C N N 386 VAL OXT O N N 387 VAL H H N N 388 VAL H2 H N N 389 VAL HA H N N 390 VAL HB H N N 391 VAL HG11 H N N 392 VAL HG12 H N N 393 VAL HG13 H N N 394 VAL HG21 H N N 395 VAL HG22 H N N 396 VAL HG23 H N N 397 VAL HXT H N N 398 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 SKM O12 C8 sing N N 277 SKM O12 H12 sing N N 278 SKM C8 C6 sing N N 279 SKM C8 C9 sing N N 280 SKM C8 H8 sing N N 281 SKM C6 O7 sing N N 282 SKM C6 C5 sing N N 283 SKM C6 H6 sing N N 284 SKM O7 HO7 sing N N 285 SKM C5 C4 sing N N 286 SKM C5 H51 sing N N 287 SKM C5 H52 sing N N 288 SKM C4 C1 sing N N 289 SKM C4 C10 doub N N 290 SKM C1 O2 sing N N 291 SKM C1 O3 doub N N 292 SKM O2 HO2 sing N N 293 SKM C10 C9 sing N N 294 SKM C10 H10 sing N N 295 SKM C9 O11 sing N N 296 SKM C9 H9 sing N N 297 SKM O11 H11 sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID' SKM 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3DON _pdbx_initial_refinement_model.details 'PDB ENTRY 3DON' #