data_3DQK # _entry.id 3DQK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3DQK RCSB RCSB048364 WWPDB D_1000048364 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1HUY unspecified 'CRYSTAL STRUCTURE OF CITRINE, AN IMPROVED YELLOW VARIANT OF GREEN FLUORESCENT PROTEIN' PDB 1YFP unspecified 'CRYSTAL STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP, P21212 SPACE GROUP' PDB 2YFP unspecified 'CRYSTAL STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP, P212121 SPACE GROUP' PDB 1F0B unspecified 'CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q' PDB 1F09 unspecified 'CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q WITH TWO BOUND IODIDES' PDB 3DPW unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1 Atmosphere Number 1: Structure 1 in a Series of 26 High Pressure Structures ; PDB 3DPX unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 5000 Atmospheres: Structure 26 in a Series of 26 High Pressure Structures ; PDB 3DPZ unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 3: Structure 25 in a Series of 26 High Pressure Structures ; PDB 3DQ1 unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 2: Structure 24 in a Series of 26 High Pressure Structures ; PDB 3DQ2 unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 1: Structure 23 in a Series of 26 High Pressure Structures ; PDB 3DQ3 unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 2500 Atmospheres: Structure 22 in a Series of 26 High Pressure Structures ; PDB 3DQ4 unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 2000 Atmospheres Number 2: Structure 20 in a Series of 26 High Pressure Structures ; PDB 3DQ5 unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1960 Atmospheres: Structure 19 in a Series of 26 High Pressure Structures ; PDB 3DQ6 unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 2: Structure 18 in a Series of 26 High Pressure Structures ; PDB 3DQ7 unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 1: Structure 17 in a Series of 26 High Pressure Structures ; PDB 3DQ8 unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1500 Atmospheres Number 2: Structure 16 in a Series of 26 High Pressure Structures ; PDB 3DQ9 unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1500 Atmospheres Number 1: Structure 15 in a Series of 26 High Pressure Structures ; PDB 3DQA unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 4: Structure 14 in a Series of 26 High Pressure Structures ; PDB 3DQC unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 3: Structure 13 in a Series of 26 High Pressure Structures ; PDB 3DQD unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 2: Structure 12 in a Series of 26 High Pressure Structures ; PDB 3DQE unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 1: Structure 11 in a Series of 26 High Pressure Structures ; PDB 3DQF unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 6: Structure 10 in a Series of 26 High Pressure Structures ; PDB 3DQH unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 5: Structure 9 in a Series of 26 High Pressure Structures ; PDB 3DQI unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 4: Structure 8 in a Series of 26 High Pressure Structures ; PDB 3DQJ unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 3: Structure 7 in a Series of 26 High Pressure Structures ; PDB 3DQL unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 1: Structure 5 in a Series of 26 High Pressure Structures ; PDB 3DQM unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 750 Atmospheres: Structure 4 in a Series of 26 High Pressure Structures ; PDB 3DQN unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 500 Atmospheres: Structure 3 in a Series of 26 High Pressure Structures ; PDB 3DQO unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1 Atmosphere Number 2: Structure 2 in a Series of 26 High Pressure Structures ; PDB 3DQU unspecified ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 2000 Atmospheres Number 1: Structure 20 in a Series of 26 High Pressure Structures ; # _pdbx_database_status.entry_id 3DQK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-07-09 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Barstow, B.' 1 'Kim, C.U.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.' Proc.Natl.Acad.Sci.Usa 105 13362 13366 2008 PNASA6 US 0027-8424 0040 ? 18768811 10.1073/pnas.0802252105 1 'High-pressure cooling of protein crystals without cryoprotectants.' 'Acta Crystallogr.,Sect.D' 61 881 890 2005 ABCRE6 DK 0907-4449 0766 ? 15983410 10.1107/S090744490500836X # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Barstow, B.' 1 primary 'Ando, N.' 2 primary 'Kim, C.U.' 3 primary 'Gruner, S.M.' 4 1 'Kim, C.U.' 5 1 'Kapfer, R.' 6 1 'Gruner, S.M.' 7 # _cell.entry_id 3DQK _cell.length_a 51.362 _cell.length_b 62.928 _cell.length_c 71.297 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DQK _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Green fluorescent protein' 27393.916 1 ? 'S65G, V68L, Q69M, S72A, T203Y' ? ? 2 water nat water 18.015 270 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GDDPMVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTF(CR2)LMCFAR YPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIM ADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLEFVTAAGITLGM DELYK ; _entity_poly.pdbx_seq_one_letter_code_can ;GDDPMVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFGYGLMCFARYP DHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMAD KQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLEFVTAAGITLGMDE LYK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASP n 1 3 ASP n 1 4 PRO n 1 5 MET n 1 6 VAL n 1 7 SER n 1 8 LYS n 1 9 GLY n 1 10 GLU n 1 11 GLU n 1 12 LEU n 1 13 PHE n 1 14 THR n 1 15 GLY n 1 16 VAL n 1 17 VAL n 1 18 PRO n 1 19 ILE n 1 20 LEU n 1 21 VAL n 1 22 GLU n 1 23 LEU n 1 24 ASP n 1 25 GLY n 1 26 ASP n 1 27 VAL n 1 28 ASN n 1 29 GLY n 1 30 HIS n 1 31 LYS n 1 32 PHE n 1 33 SER n 1 34 VAL n 1 35 SER n 1 36 GLY n 1 37 GLU n 1 38 GLY n 1 39 GLU n 1 40 GLY n 1 41 ASP n 1 42 ALA n 1 43 THR n 1 44 TYR n 1 45 GLY n 1 46 LYS n 1 47 LEU n 1 48 THR n 1 49 LEU n 1 50 LYS n 1 51 PHE n 1 52 ILE n 1 53 CYS n 1 54 THR n 1 55 THR n 1 56 GLY n 1 57 LYS n 1 58 LEU n 1 59 PRO n 1 60 VAL n 1 61 PRO n 1 62 TRP n 1 63 PRO n 1 64 THR n 1 65 LEU n 1 66 VAL n 1 67 THR n 1 68 THR n 1 69 PHE n 1 70 CR2 n 1 71 LEU n 1 72 MET n 1 73 CYS n 1 74 PHE n 1 75 ALA n 1 76 ARG n 1 77 TYR n 1 78 PRO n 1 79 ASP n 1 80 HIS n 1 81 MET n 1 82 LYS n 1 83 GLN n 1 84 HIS n 1 85 ASP n 1 86 PHE n 1 87 PHE n 1 88 LYS n 1 89 SER n 1 90 ALA n 1 91 MET n 1 92 PRO n 1 93 GLU n 1 94 GLY n 1 95 TYR n 1 96 VAL n 1 97 GLN n 1 98 GLU n 1 99 ARG n 1 100 THR n 1 101 ILE n 1 102 PHE n 1 103 PHE n 1 104 LYS n 1 105 ASP n 1 106 ASP n 1 107 GLY n 1 108 ASN n 1 109 TYR n 1 110 LYS n 1 111 THR n 1 112 ARG n 1 113 ALA n 1 114 GLU n 1 115 VAL n 1 116 LYS n 1 117 PHE n 1 118 GLU n 1 119 GLY n 1 120 ASP n 1 121 THR n 1 122 LEU n 1 123 VAL n 1 124 ASN n 1 125 ARG n 1 126 ILE n 1 127 GLU n 1 128 LEU n 1 129 LYS n 1 130 GLY n 1 131 ILE n 1 132 ASP n 1 133 PHE n 1 134 LYS n 1 135 GLU n 1 136 ASP n 1 137 GLY n 1 138 ASN n 1 139 ILE n 1 140 LEU n 1 141 GLY n 1 142 HIS n 1 143 LYS n 1 144 LEU n 1 145 GLU n 1 146 TYR n 1 147 ASN n 1 148 TYR n 1 149 ASN n 1 150 SER n 1 151 HIS n 1 152 ASN n 1 153 VAL n 1 154 TYR n 1 155 ILE n 1 156 MET n 1 157 ALA n 1 158 ASP n 1 159 LYS n 1 160 GLN n 1 161 LYS n 1 162 ASN n 1 163 GLY n 1 164 ILE n 1 165 LYS n 1 166 VAL n 1 167 ASN n 1 168 PHE n 1 169 LYS n 1 170 ILE n 1 171 ARG n 1 172 HIS n 1 173 ASN n 1 174 ILE n 1 175 GLU n 1 176 ASP n 1 177 GLY n 1 178 SER n 1 179 VAL n 1 180 GLN n 1 181 LEU n 1 182 ALA n 1 183 ASP n 1 184 HIS n 1 185 TYR n 1 186 GLN n 1 187 GLN n 1 188 ASN n 1 189 THR n 1 190 PRO n 1 191 ILE n 1 192 GLY n 1 193 ASP n 1 194 GLY n 1 195 PRO n 1 196 VAL n 1 197 LEU n 1 198 LEU n 1 199 PRO n 1 200 ASP n 1 201 ASN n 1 202 HIS n 1 203 TYR n 1 204 LEU n 1 205 SER n 1 206 TYR n 1 207 GLN n 1 208 SER n 1 209 ALA n 1 210 LEU n 1 211 SER n 1 212 LYS n 1 213 ASP n 1 214 PRO n 1 215 ASN n 1 216 GLU n 1 217 LYS n 1 218 ARG n 1 219 ASP n 1 220 HIS n 1 221 MET n 1 222 VAL n 1 223 LEU n 1 224 LEU n 1 225 GLU n 1 226 PHE n 1 227 VAL n 1 228 THR n 1 229 ALA n 1 230 ALA n 1 231 GLY n 1 232 ILE n 1 233 THR n 1 234 LEU n 1 235 GLY n 1 236 MET n 1 237 ASP n 1 238 GLU n 1 239 LEU n 1 240 TYR n 1 241 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Jellyfish _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GFP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aequorea victoria' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6100 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GFP_AEQVI _struct_ref.pdbx_db_accession P42212 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKQH DFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGI KVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMDELYK ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DQK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 7 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 241 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P42212 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 238 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 238 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DQK GLY A 1 ? UNP P42212 ? ? 'EXPRESSION TAG' -4 1 1 3DQK ASP A 2 ? UNP P42212 ? ? 'EXPRESSION TAG' -3 2 1 3DQK ASP A 3 ? UNP P42212 ? ? 'EXPRESSION TAG' -2 3 1 3DQK PRO A 4 ? UNP P42212 ? ? 'EXPRESSION TAG' -1 4 1 3DQK MET A 5 ? UNP P42212 ? ? 'EXPRESSION TAG' 0 5 1 3DQK VAL A 6 ? UNP P42212 ? ? 'EXPRESSION TAG' 1 6 1 3DQK CR2 A 70 ? UNP P42212 SER 65 CHROMOPHORE 66 7 1 3DQK CR2 A 70 ? UNP P42212 TYR 66 CHROMOPHORE 66 8 1 3DQK CR2 A 70 ? UNP P42212 GLY 67 CHROMOPHORE 66 9 1 3DQK LEU A 71 ? UNP P42212 VAL 68 ENGINEERED 68 10 1 3DQK MET A 72 ? UNP P42212 GLN 69 ENGINEERED 69 11 1 3DQK ALA A 75 ? UNP P42212 SER 72 ENGINEERED 72 12 1 3DQK TYR A 206 ? UNP P42212 THR 203 ENGINEERED 203 13 1 3DQK LEU A 234 ? UNP P42212 HIS 231 ENGINEERED 231 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CR2 'L-peptide linking' n '{(4Z)-2-(aminomethyl)-4-[(4-hydroxyphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid' 'CHROMOPHORE (GLY-TYR-GLY)' 'C13 H13 N3 O4' 275.260 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3DQK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_percent_sol 41.51 _exptl_crystal.description ;Crystal structure of the Yellow Fluorescent Protein Citrine frozen at 1000 atmospheres. Structure 6 of 26 in a series of high pressure structures. Crystal was high pressure cryo-cooled at 1000 atmospheres in helium gas. Crystal temperature was maintained below 100 K prior to data collection at ambient pressure and 100 K. High pressure cryo-cooling procedure is described in secondary citation 1 (Kim et al., Acta Cryst. D61:881-890). Structure referred to as citrine1000_2 in primary citation (Barstow et al.). ; _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;Crystals grown by seeding using a Seed Bead (HR2-320, Hampton Research) in 5% PEG 3350, 50 mM Na Acetate, 50 mM NH4 Acetate, pH 5.0. Crystals were grown at 4 deg C and at ambient pressure, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2005-11-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) DOUBLE CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE F2' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline F2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 3DQK _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 39.79 _reflns.d_resolution_high 1.40 _reflns.number_obs 30231 _reflns.number_all ? _reflns.percent_possible_obs 65.4 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_Rsym_value 0.079 _reflns.pdbx_netI_over_sigmaI 6.800 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.40 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 99.30 _reflns_shell.Rmerge_I_obs 0.325 _reflns_shell.pdbx_Rsym_value 0.325 _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_redundancy 4.80 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3DQK _refine.ls_number_reflns_obs 28699 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 65.56 _refine.ls_R_factor_obs 0.21572 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21307 _refine.ls_R_factor_R_free 0.26457 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1513 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.935 _refine.B_iso_mean 23.777 _refine.aniso_B[1][1] -0.12 _refine.aniso_B[2][2] -0.04 _refine.aniso_B[3][3] 0.15 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. This structure is refined slightly differently from the corresponding structure used for analysis in the primary citation (Barstow et al.). However, analysis of the deformation motion of the chromophore under pressure in this sequence of deposited structures produces an identical deformation trend. For copies of the structures as used in the analysis in the primary citation please contact the authors. ; _refine.pdbx_starting_model 'PDB ENTRY 1HUY WITH RESIDUE 80 MUTATED TO GLUTAMINE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.113 _refine.pdbx_overall_ESU_R_Free 0.118 _refine.overall_SU_ML 0.079 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.005 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1850 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 270 _refine_hist.number_atoms_total 2120 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.027 0.022 ? 1896 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.263 1.966 ? 2559 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.181 5.000 ? 228 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.117 25.109 ? 92 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.416 15.000 ? 324 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9.523 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.151 0.200 ? 272 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 1451 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.300 0.200 ? 978 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.308 0.200 ? 1224 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.186 0.200 ? 221 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.194 0.200 ? 39 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.118 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.883 1.500 ? 1182 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.211 2.000 ? 1841 'X-RAY DIFFRACTION' ? r_scbond_it 4.202 3.000 ? 831 'X-RAY DIFFRACTION' ? r_scangle_it 5.953 4.500 ? 718 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.400 _refine_ls_shell.d_res_low 1.437 _refine_ls_shell.number_reflns_R_work 18 _refine_ls_shell.R_factor_R_work 0.358 _refine_ls_shell.percent_reflns_obs 0.63 _refine_ls_shell.R_factor_R_free 0.268 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 3 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DQK _struct.title ;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 2: Structure 6 in a Series of 26 High Pressure Structures ; _struct.pdbx_descriptor 'Green fluorescent protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DQK _struct_keywords.text ;Yellow Fluorescent Protein, beta barrel, chromophore, fluorescent protein, high pressure, Luminescence, Photoprotein, LUMINESCENT PROTEIN ; _struct_keywords.pdbx_keywords 'LUMINESCENT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 3 ? THR A 14 ? ASP A -2 THR A 9 1 ? 12 HELX_P HELX_P2 2 PRO A 61 ? VAL A 66 ? PRO A 56 VAL A 61 5 ? 6 HELX_P HELX_P3 3 LEU A 71 ? ALA A 75 ? LEU A 68 ALA A 72 5 ? 5 HELX_P HELX_P4 4 PRO A 78 ? HIS A 84 ? PRO A 75 HIS A 81 5 ? 7 HELX_P HELX_P5 5 ASP A 85 ? ALA A 90 ? ASP A 82 ALA A 87 1 ? 6 HELX_P HELX_P6 6 LYS A 159 ? ASN A 162 ? LYS A 156 ASN A 159 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A PHE 69 C ? ? ? 1_555 A CR2 70 N1 ? ? A PHE 64 A CR2 66 1_555 ? ? ? ? ? ? ? 1.337 ? covale2 covale ? ? A CR2 70 C3 ? ? ? 1_555 A LEU 71 N ? ? A CR2 66 A LEU 68 1_555 ? ? ? ? ? ? ? 1.281 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id MET _struct_mon_prot_cis.label_seq_id 91 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id MET _struct_mon_prot_cis.auth_seq_id 88 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 92 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 89 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.55 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 12 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 17 ? VAL A 27 ? VAL A 12 VAL A 22 A 2 HIS A 30 ? ASP A 41 ? HIS A 25 ASP A 36 A 3 LYS A 46 ? CYS A 53 ? LYS A 41 CYS A 48 A 4 HIS A 220 ? ALA A 230 ? HIS A 217 ALA A 227 A 5 HIS A 202 ? SER A 211 ? HIS A 199 SER A 208 A 6 HIS A 151 ? ASP A 158 ? HIS A 148 ASP A 155 A 7 GLY A 163 ? ASN A 173 ? GLY A 160 ASN A 170 A 8 VAL A 179 ? PRO A 190 ? VAL A 176 PRO A 187 A 9 TYR A 95 ? PHE A 103 ? TYR A 92 PHE A 100 A 10 ASN A 108 ? GLU A 118 ? ASN A 105 GLU A 115 A 11 THR A 121 ? ILE A 131 ? THR A 118 ILE A 128 A 12 VAL A 17 ? VAL A 27 ? VAL A 12 VAL A 22 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 23 ? N LEU A 18 O VAL A 34 ? O VAL A 29 A 2 3 N ASP A 41 ? N ASP A 36 O LYS A 46 ? O LYS A 41 A 3 4 N PHE A 51 ? N PHE A 46 O MET A 221 ? O MET A 218 A 4 5 O THR A 228 ? O THR A 225 N SER A 205 ? N SER A 202 A 5 6 O HIS A 202 ? O HIS A 199 N ILE A 155 ? N ILE A 152 A 6 7 N MET A 156 ? N MET A 153 O LYS A 165 ? O LYS A 162 A 7 8 N PHE A 168 ? N PHE A 165 O HIS A 184 ? O HIS A 181 A 8 9 O THR A 189 ? O THR A 186 N VAL A 96 ? N VAL A 93 A 9 10 N TYR A 95 ? N TYR A 92 O VAL A 115 ? O VAL A 112 A 10 11 N GLU A 118 ? N GLU A 115 O THR A 121 ? O THR A 118 A 11 12 O ILE A 126 ? O ILE A 123 N GLU A 22 ? N GLU A 17 # _atom_sites.entry_id 3DQK _atom_sites.fract_transf_matrix[1][1] 0.019470 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015891 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014026 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 ASP 2 -3 ? ? ? A . n A 1 3 ASP 3 -2 -2 ASP ASP A . n A 1 4 PRO 4 -1 -1 PRO PRO A . n A 1 5 MET 5 0 0 MET MET A . n A 1 6 VAL 6 1 1 VAL VAL A . n A 1 7 SER 7 2 2 SER SER A . n A 1 8 LYS 8 3 3 LYS LYS A . n A 1 9 GLY 9 4 4 GLY GLY A . n A 1 10 GLU 10 5 5 GLU GLU A . n A 1 11 GLU 11 6 6 GLU GLU A . n A 1 12 LEU 12 7 7 LEU LEU A . n A 1 13 PHE 13 8 8 PHE PHE A . n A 1 14 THR 14 9 9 THR THR A . n A 1 15 GLY 15 10 10 GLY GLY A . n A 1 16 VAL 16 11 11 VAL VAL A . n A 1 17 VAL 17 12 12 VAL VAL A . n A 1 18 PRO 18 13 13 PRO PRO A . n A 1 19 ILE 19 14 14 ILE ILE A . n A 1 20 LEU 20 15 15 LEU LEU A . n A 1 21 VAL 21 16 16 VAL VAL A . n A 1 22 GLU 22 17 17 GLU GLU A . n A 1 23 LEU 23 18 18 LEU LEU A . n A 1 24 ASP 24 19 19 ASP ASP A . n A 1 25 GLY 25 20 20 GLY GLY A . n A 1 26 ASP 26 21 21 ASP ASP A . n A 1 27 VAL 27 22 22 VAL VAL A . n A 1 28 ASN 28 23 23 ASN ASN A . n A 1 29 GLY 29 24 24 GLY GLY A . n A 1 30 HIS 30 25 25 HIS HIS A . n A 1 31 LYS 31 26 26 LYS LYS A . n A 1 32 PHE 32 27 27 PHE PHE A . n A 1 33 SER 33 28 28 SER SER A . n A 1 34 VAL 34 29 29 VAL VAL A . n A 1 35 SER 35 30 30 SER SER A . n A 1 36 GLY 36 31 31 GLY GLY A . n A 1 37 GLU 37 32 32 GLU GLU A . n A 1 38 GLY 38 33 33 GLY GLY A . n A 1 39 GLU 39 34 34 GLU GLU A . n A 1 40 GLY 40 35 35 GLY GLY A . n A 1 41 ASP 41 36 36 ASP ASP A . n A 1 42 ALA 42 37 37 ALA ALA A . n A 1 43 THR 43 38 38 THR THR A . n A 1 44 TYR 44 39 39 TYR TYR A . n A 1 45 GLY 45 40 40 GLY GLY A . n A 1 46 LYS 46 41 41 LYS LYS A . n A 1 47 LEU 47 42 42 LEU LEU A . n A 1 48 THR 48 43 43 THR THR A . n A 1 49 LEU 49 44 44 LEU LEU A . n A 1 50 LYS 50 45 45 LYS LYS A . n A 1 51 PHE 51 46 46 PHE PHE A . n A 1 52 ILE 52 47 47 ILE ILE A . n A 1 53 CYS 53 48 48 CYS CYS A . n A 1 54 THR 54 49 49 THR THR A . n A 1 55 THR 55 50 50 THR THR A . n A 1 56 GLY 56 51 51 GLY GLY A . n A 1 57 LYS 57 52 52 LYS LYS A . n A 1 58 LEU 58 53 53 LEU LEU A . n A 1 59 PRO 59 54 54 PRO PRO A . n A 1 60 VAL 60 55 55 VAL VAL A . n A 1 61 PRO 61 56 56 PRO PRO A . n A 1 62 TRP 62 57 57 TRP TRP A . n A 1 63 PRO 63 58 58 PRO PRO A . n A 1 64 THR 64 59 59 THR THR A . n A 1 65 LEU 65 60 60 LEU LEU A . n A 1 66 VAL 66 61 61 VAL VAL A . n A 1 67 THR 67 62 62 THR THR A . n A 1 68 THR 68 63 63 THR THR A . n A 1 69 PHE 69 64 64 PHE PHE A . n A 1 70 CR2 70 66 66 CR2 CR2 A . n A 1 71 LEU 71 68 68 LEU LEU A . n A 1 72 MET 72 69 69 MET MET A . n A 1 73 CYS 73 70 70 CYS CYS A . n A 1 74 PHE 74 71 71 PHE PHE A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 ARG 76 73 73 ARG ARG A . n A 1 77 TYR 77 74 74 TYR TYR A . n A 1 78 PRO 78 75 75 PRO PRO A . n A 1 79 ASP 79 76 76 ASP ASP A . n A 1 80 HIS 80 77 77 HIS HIS A . n A 1 81 MET 81 78 78 MET MET A . n A 1 82 LYS 82 79 79 LYS LYS A . n A 1 83 GLN 83 80 80 GLN GLN A . n A 1 84 HIS 84 81 81 HIS HIS A . n A 1 85 ASP 85 82 82 ASP ASP A . n A 1 86 PHE 86 83 83 PHE PHE A . n A 1 87 PHE 87 84 84 PHE PHE A . n A 1 88 LYS 88 85 85 LYS LYS A . n A 1 89 SER 89 86 86 SER SER A . n A 1 90 ALA 90 87 87 ALA ALA A . n A 1 91 MET 91 88 88 MET MET A . n A 1 92 PRO 92 89 89 PRO PRO A . n A 1 93 GLU 93 90 90 GLU GLU A . n A 1 94 GLY 94 91 91 GLY GLY A . n A 1 95 TYR 95 92 92 TYR TYR A . n A 1 96 VAL 96 93 93 VAL VAL A . n A 1 97 GLN 97 94 94 GLN GLN A . n A 1 98 GLU 98 95 95 GLU GLU A . n A 1 99 ARG 99 96 96 ARG ARG A . n A 1 100 THR 100 97 97 THR THR A . n A 1 101 ILE 101 98 98 ILE ILE A . n A 1 102 PHE 102 99 99 PHE PHE A . n A 1 103 PHE 103 100 100 PHE PHE A . n A 1 104 LYS 104 101 101 LYS LYS A . n A 1 105 ASP 105 102 102 ASP ASP A . n A 1 106 ASP 106 103 103 ASP ASP A . n A 1 107 GLY 107 104 104 GLY GLY A . n A 1 108 ASN 108 105 105 ASN ASN A . n A 1 109 TYR 109 106 106 TYR TYR A . n A 1 110 LYS 110 107 107 LYS LYS A . n A 1 111 THR 111 108 108 THR THR A . n A 1 112 ARG 112 109 109 ARG ARG A . n A 1 113 ALA 113 110 110 ALA ALA A . n A 1 114 GLU 114 111 111 GLU GLU A . n A 1 115 VAL 115 112 112 VAL VAL A . n A 1 116 LYS 116 113 113 LYS LYS A . n A 1 117 PHE 117 114 114 PHE PHE A . n A 1 118 GLU 118 115 115 GLU GLU A . n A 1 119 GLY 119 116 116 GLY GLY A . n A 1 120 ASP 120 117 117 ASP ASP A . n A 1 121 THR 121 118 118 THR THR A . n A 1 122 LEU 122 119 119 LEU LEU A . n A 1 123 VAL 123 120 120 VAL VAL A . n A 1 124 ASN 124 121 121 ASN ASN A . n A 1 125 ARG 125 122 122 ARG ARG A . n A 1 126 ILE 126 123 123 ILE ILE A . n A 1 127 GLU 127 124 124 GLU GLU A . n A 1 128 LEU 128 125 125 LEU LEU A . n A 1 129 LYS 129 126 126 LYS LYS A . n A 1 130 GLY 130 127 127 GLY GLY A . n A 1 131 ILE 131 128 128 ILE ILE A . n A 1 132 ASP 132 129 129 ASP ASP A . n A 1 133 PHE 133 130 130 PHE PHE A . n A 1 134 LYS 134 131 131 LYS LYS A . n A 1 135 GLU 135 132 132 GLU GLU A . n A 1 136 ASP 136 133 133 ASP ASP A . n A 1 137 GLY 137 134 134 GLY GLY A . n A 1 138 ASN 138 135 135 ASN ASN A . n A 1 139 ILE 139 136 136 ILE ILE A . n A 1 140 LEU 140 137 137 LEU LEU A . n A 1 141 GLY 141 138 138 GLY GLY A . n A 1 142 HIS 142 139 139 HIS HIS A . n A 1 143 LYS 143 140 140 LYS LYS A . n A 1 144 LEU 144 141 141 LEU LEU A . n A 1 145 GLU 145 142 142 GLU GLU A . n A 1 146 TYR 146 143 143 TYR TYR A . n A 1 147 ASN 147 144 144 ASN ASN A . n A 1 148 TYR 148 145 145 TYR TYR A . n A 1 149 ASN 149 146 146 ASN ASN A . n A 1 150 SER 150 147 147 SER SER A . n A 1 151 HIS 151 148 148 HIS HIS A . n A 1 152 ASN 152 149 149 ASN ASN A . n A 1 153 VAL 153 150 150 VAL VAL A . n A 1 154 TYR 154 151 151 TYR TYR A . n A 1 155 ILE 155 152 152 ILE ILE A . n A 1 156 MET 156 153 153 MET MET A . n A 1 157 ALA 157 154 154 ALA ALA A . n A 1 158 ASP 158 155 155 ASP ASP A . n A 1 159 LYS 159 156 156 LYS LYS A . n A 1 160 GLN 160 157 157 GLN GLN A . n A 1 161 LYS 161 158 158 LYS LYS A . n A 1 162 ASN 162 159 159 ASN ASN A . n A 1 163 GLY 163 160 160 GLY GLY A . n A 1 164 ILE 164 161 161 ILE ILE A . n A 1 165 LYS 165 162 162 LYS LYS A . n A 1 166 VAL 166 163 163 VAL VAL A . n A 1 167 ASN 167 164 164 ASN ASN A . n A 1 168 PHE 168 165 165 PHE PHE A . n A 1 169 LYS 169 166 166 LYS LYS A . n A 1 170 ILE 170 167 167 ILE ILE A . n A 1 171 ARG 171 168 168 ARG ARG A . n A 1 172 HIS 172 169 169 HIS HIS A . n A 1 173 ASN 173 170 170 ASN ASN A . n A 1 174 ILE 174 171 171 ILE ILE A . n A 1 175 GLU 175 172 172 GLU GLU A . n A 1 176 ASP 176 173 173 ASP ASP A . n A 1 177 GLY 177 174 174 GLY GLY A . n A 1 178 SER 178 175 175 SER SER A . n A 1 179 VAL 179 176 176 VAL VAL A . n A 1 180 GLN 180 177 177 GLN GLN A . n A 1 181 LEU 181 178 178 LEU LEU A . n A 1 182 ALA 182 179 179 ALA ALA A . n A 1 183 ASP 183 180 180 ASP ASP A . n A 1 184 HIS 184 181 181 HIS HIS A . n A 1 185 TYR 185 182 182 TYR TYR A . n A 1 186 GLN 186 183 183 GLN GLN A . n A 1 187 GLN 187 184 184 GLN GLN A . n A 1 188 ASN 188 185 185 ASN ASN A . n A 1 189 THR 189 186 186 THR THR A . n A 1 190 PRO 190 187 187 PRO PRO A . n A 1 191 ILE 191 188 188 ILE ILE A . n A 1 192 GLY 192 189 189 GLY GLY A . n A 1 193 ASP 193 190 190 ASP ASP A . n A 1 194 GLY 194 191 191 GLY GLY A . n A 1 195 PRO 195 192 192 PRO PRO A . n A 1 196 VAL 196 193 193 VAL VAL A . n A 1 197 LEU 197 194 194 LEU LEU A . n A 1 198 LEU 198 195 195 LEU LEU A . n A 1 199 PRO 199 196 196 PRO PRO A . n A 1 200 ASP 200 197 197 ASP ASP A . n A 1 201 ASN 201 198 198 ASN ASN A . n A 1 202 HIS 202 199 199 HIS HIS A . n A 1 203 TYR 203 200 200 TYR TYR A . n A 1 204 LEU 204 201 201 LEU LEU A . n A 1 205 SER 205 202 202 SER SER A . n A 1 206 TYR 206 203 203 TYR TYR A . n A 1 207 GLN 207 204 204 GLN GLN A . n A 1 208 SER 208 205 205 SER SER A . n A 1 209 ALA 209 206 206 ALA ALA A . n A 1 210 LEU 210 207 207 LEU LEU A . n A 1 211 SER 211 208 208 SER SER A . n A 1 212 LYS 212 209 209 LYS LYS A . n A 1 213 ASP 213 210 210 ASP ASP A . n A 1 214 PRO 214 211 211 PRO PRO A . n A 1 215 ASN 215 212 212 ASN ASN A . n A 1 216 GLU 216 213 213 GLU GLU A . n A 1 217 LYS 217 214 214 LYS LYS A . n A 1 218 ARG 218 215 215 ARG ARG A . n A 1 219 ASP 219 216 216 ASP ASP A . n A 1 220 HIS 220 217 217 HIS HIS A . n A 1 221 MET 221 218 218 MET MET A . n A 1 222 VAL 222 219 219 VAL VAL A . n A 1 223 LEU 223 220 220 LEU LEU A . n A 1 224 LEU 224 221 221 LEU LEU A . n A 1 225 GLU 225 222 222 GLU GLU A . n A 1 226 PHE 226 223 223 PHE PHE A . n A 1 227 VAL 227 224 224 VAL VAL A . n A 1 228 THR 228 225 225 THR THR A . n A 1 229 ALA 229 226 226 ALA ALA A . n A 1 230 ALA 230 227 227 ALA ALA A . n A 1 231 GLY 231 228 228 GLY GLY A . n A 1 232 ILE 232 229 229 ILE ILE A . n A 1 233 THR 233 230 230 THR THR A . n A 1 234 LEU 234 231 ? ? ? A . n A 1 235 GLY 235 232 ? ? ? A . n A 1 236 MET 236 233 ? ? ? A . n A 1 237 ASP 237 234 ? ? ? A . n A 1 238 GLU 238 235 ? ? ? A . n A 1 239 LEU 239 236 ? ? ? A . n A 1 240 TYR 240 237 ? ? ? A . n A 1 241 LYS 241 238 ? ? ? A . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CR2 70 A CR2 66 ? GLY ? 2 A CR2 70 A CR2 66 ? TYR ? 3 A CR2 70 A CR2 66 ? GLY ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-23 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # _pdbx_phasing_MR.entry_id 3DQK _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.890 _pdbx_phasing_MR.d_res_low_rotation 39.790 _pdbx_phasing_MR.d_res_high_translation 1.890 _pdbx_phasing_MR.d_res_low_translation 39.790 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SCALA 3.2.25 21/9/2006 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 1 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 2 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 6 # _pdbx_entry_details.entry_id 3DQK _pdbx_entry_details.sequence_details ;RESIDUE SER 65 HAS BEEN MUTATED TO GLY 65. RESIDUES GLY 65, TYR 66 AND GLY 67 CONSTITUTE THE CHROMOPHORE CR2 66. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CA A GLY 4 ? ? O A HOH 483 ? ? 2.17 2 1 CD1 A LEU 42 ? ? O A HOH 497 ? ? 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 90 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 90 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.605 _pdbx_validate_rmsd_bond.bond_target_value 1.515 _pdbx_validate_rmsd_bond.bond_deviation 0.090 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.015 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 132 ? ? -23.91 -58.59 2 1 ILE A 136 ? ? -94.32 -68.14 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A ASP -3 ? A ASP 2 3 1 Y 1 A LEU 231 ? A LEU 234 4 1 Y 1 A GLY 232 ? A GLY 235 5 1 Y 1 A MET 233 ? A MET 236 6 1 Y 1 A ASP 234 ? A ASP 237 7 1 Y 1 A GLU 235 ? A GLU 238 8 1 Y 1 A LEU 236 ? A LEU 239 9 1 Y 1 A TYR 237 ? A TYR 240 10 1 Y 1 A LYS 238 ? A LYS 241 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 239 1 HOH HOH A . B 2 HOH 2 240 2 HOH HOH A . B 2 HOH 3 241 3 HOH HOH A . B 2 HOH 4 242 4 HOH HOH A . B 2 HOH 5 243 5 HOH HOH A . B 2 HOH 6 244 6 HOH HOH A . B 2 HOH 7 245 7 HOH HOH A . B 2 HOH 8 246 8 HOH HOH A . B 2 HOH 9 247 9 HOH HOH A . B 2 HOH 10 248 10 HOH HOH A . B 2 HOH 11 249 11 HOH HOH A . B 2 HOH 12 250 12 HOH HOH A . B 2 HOH 13 251 13 HOH HOH A . B 2 HOH 14 252 14 HOH HOH A . B 2 HOH 15 253 15 HOH HOH A . B 2 HOH 16 254 16 HOH HOH A . B 2 HOH 17 255 17 HOH HOH A . B 2 HOH 18 256 18 HOH HOH A . B 2 HOH 19 257 19 HOH HOH A . B 2 HOH 20 258 20 HOH HOH A . B 2 HOH 21 259 21 HOH HOH A . B 2 HOH 22 260 22 HOH HOH A . B 2 HOH 23 261 23 HOH HOH A . B 2 HOH 24 262 24 HOH HOH A . B 2 HOH 25 263 25 HOH HOH A . B 2 HOH 26 264 26 HOH HOH A . B 2 HOH 27 265 27 HOH HOH A . B 2 HOH 28 266 28 HOH HOH A . B 2 HOH 29 267 29 HOH HOH A . B 2 HOH 30 268 30 HOH HOH A . B 2 HOH 31 269 31 HOH HOH A . B 2 HOH 32 270 32 HOH HOH A . B 2 HOH 33 271 33 HOH HOH A . B 2 HOH 34 272 34 HOH HOH A . B 2 HOH 35 273 35 HOH HOH A . B 2 HOH 36 274 36 HOH HOH A . B 2 HOH 37 275 37 HOH HOH A . B 2 HOH 38 276 38 HOH HOH A . B 2 HOH 39 277 39 HOH HOH A . B 2 HOH 40 278 40 HOH HOH A . B 2 HOH 41 279 41 HOH HOH A . B 2 HOH 42 280 42 HOH HOH A . B 2 HOH 43 281 43 HOH HOH A . B 2 HOH 44 282 44 HOH HOH A . B 2 HOH 45 283 45 HOH HOH A . B 2 HOH 46 284 46 HOH HOH A . B 2 HOH 47 285 47 HOH HOH A . B 2 HOH 48 286 48 HOH HOH A . B 2 HOH 49 287 49 HOH HOH A . B 2 HOH 50 288 50 HOH HOH A . B 2 HOH 51 289 51 HOH HOH A . B 2 HOH 52 290 52 HOH HOH A . B 2 HOH 53 291 53 HOH HOH A . B 2 HOH 54 292 54 HOH HOH A . B 2 HOH 55 293 55 HOH HOH A . B 2 HOH 56 294 56 HOH HOH A . B 2 HOH 57 295 57 HOH HOH A . B 2 HOH 58 296 58 HOH HOH A . B 2 HOH 59 297 59 HOH HOH A . B 2 HOH 60 298 60 HOH HOH A . B 2 HOH 61 299 61 HOH HOH A . B 2 HOH 62 300 62 HOH HOH A . B 2 HOH 63 301 63 HOH HOH A . B 2 HOH 64 302 64 HOH HOH A . B 2 HOH 65 303 65 HOH HOH A . B 2 HOH 66 304 66 HOH HOH A . B 2 HOH 67 305 67 HOH HOH A . B 2 HOH 68 306 68 HOH HOH A . B 2 HOH 69 307 69 HOH HOH A . B 2 HOH 70 308 70 HOH HOH A . B 2 HOH 71 309 71 HOH HOH A . B 2 HOH 72 310 72 HOH HOH A . B 2 HOH 73 311 73 HOH HOH A . B 2 HOH 74 312 74 HOH HOH A . B 2 HOH 75 313 75 HOH HOH A . B 2 HOH 76 314 76 HOH HOH A . B 2 HOH 77 315 77 HOH HOH A . B 2 HOH 78 316 78 HOH HOH A . B 2 HOH 79 317 79 HOH HOH A . B 2 HOH 80 318 80 HOH HOH A . B 2 HOH 81 319 81 HOH HOH A . B 2 HOH 82 320 82 HOH HOH A . B 2 HOH 83 321 83 HOH HOH A . B 2 HOH 84 322 84 HOH HOH A . B 2 HOH 85 323 85 HOH HOH A . B 2 HOH 86 324 86 HOH HOH A . B 2 HOH 87 325 87 HOH HOH A . B 2 HOH 88 326 88 HOH HOH A . B 2 HOH 89 327 89 HOH HOH A . B 2 HOH 90 328 90 HOH HOH A . B 2 HOH 91 329 91 HOH HOH A . B 2 HOH 92 330 92 HOH HOH A . B 2 HOH 93 331 93 HOH HOH A . B 2 HOH 94 332 94 HOH HOH A . B 2 HOH 95 333 95 HOH HOH A . B 2 HOH 96 334 96 HOH HOH A . B 2 HOH 97 335 97 HOH HOH A . B 2 HOH 98 336 98 HOH HOH A . B 2 HOH 99 337 99 HOH HOH A . B 2 HOH 100 338 100 HOH HOH A . B 2 HOH 101 339 101 HOH HOH A . B 2 HOH 102 340 102 HOH HOH A . B 2 HOH 103 341 103 HOH HOH A . B 2 HOH 104 342 104 HOH HOH A . B 2 HOH 105 343 105 HOH HOH A . B 2 HOH 106 344 106 HOH HOH A . B 2 HOH 107 345 107 HOH HOH A . B 2 HOH 108 346 108 HOH HOH A . B 2 HOH 109 347 109 HOH HOH A . B 2 HOH 110 348 110 HOH HOH A . B 2 HOH 111 349 111 HOH HOH A . B 2 HOH 112 350 112 HOH HOH A . B 2 HOH 113 351 113 HOH HOH A . B 2 HOH 114 352 114 HOH HOH A . B 2 HOH 115 353 115 HOH HOH A . B 2 HOH 116 354 116 HOH HOH A . B 2 HOH 117 355 117 HOH HOH A . B 2 HOH 118 356 118 HOH HOH A . B 2 HOH 119 357 119 HOH HOH A . B 2 HOH 120 358 120 HOH HOH A . B 2 HOH 121 359 121 HOH HOH A . B 2 HOH 122 360 122 HOH HOH A . B 2 HOH 123 361 123 HOH HOH A . B 2 HOH 124 362 124 HOH HOH A . B 2 HOH 125 363 125 HOH HOH A . B 2 HOH 126 364 126 HOH HOH A . B 2 HOH 127 365 127 HOH HOH A . B 2 HOH 128 366 128 HOH HOH A . B 2 HOH 129 367 129 HOH HOH A . B 2 HOH 130 368 130 HOH HOH A . B 2 HOH 131 369 131 HOH HOH A . B 2 HOH 132 370 132 HOH HOH A . B 2 HOH 133 371 133 HOH HOH A . B 2 HOH 134 372 134 HOH HOH A . B 2 HOH 135 373 135 HOH HOH A . B 2 HOH 136 374 136 HOH HOH A . B 2 HOH 137 375 137 HOH HOH A . B 2 HOH 138 376 138 HOH HOH A . B 2 HOH 139 377 139 HOH HOH A . B 2 HOH 140 378 140 HOH HOH A . B 2 HOH 141 379 141 HOH HOH A . B 2 HOH 142 380 142 HOH HOH A . B 2 HOH 143 381 143 HOH HOH A . B 2 HOH 144 382 144 HOH HOH A . B 2 HOH 145 383 145 HOH HOH A . B 2 HOH 146 384 146 HOH HOH A . B 2 HOH 147 385 147 HOH HOH A . B 2 HOH 148 386 148 HOH HOH A . B 2 HOH 149 387 149 HOH HOH A . B 2 HOH 150 388 150 HOH HOH A . B 2 HOH 151 389 151 HOH HOH A . B 2 HOH 152 390 152 HOH HOH A . B 2 HOH 153 391 153 HOH HOH A . B 2 HOH 154 392 154 HOH HOH A . B 2 HOH 155 393 155 HOH HOH A . B 2 HOH 156 394 156 HOH HOH A . B 2 HOH 157 395 157 HOH HOH A . B 2 HOH 158 396 158 HOH HOH A . B 2 HOH 159 397 159 HOH HOH A . B 2 HOH 160 398 160 HOH HOH A . B 2 HOH 161 399 161 HOH HOH A . B 2 HOH 162 400 162 HOH HOH A . B 2 HOH 163 401 163 HOH HOH A . B 2 HOH 164 402 164 HOH HOH A . B 2 HOH 165 403 165 HOH HOH A . B 2 HOH 166 404 166 HOH HOH A . B 2 HOH 167 405 167 HOH HOH A . B 2 HOH 168 406 168 HOH HOH A . B 2 HOH 169 407 169 HOH HOH A . B 2 HOH 170 408 170 HOH HOH A . B 2 HOH 171 409 171 HOH HOH A . B 2 HOH 172 410 172 HOH HOH A . B 2 HOH 173 411 173 HOH HOH A . B 2 HOH 174 412 174 HOH HOH A . B 2 HOH 175 413 175 HOH HOH A . B 2 HOH 176 414 176 HOH HOH A . B 2 HOH 177 415 177 HOH HOH A . B 2 HOH 178 416 178 HOH HOH A . B 2 HOH 179 417 179 HOH HOH A . B 2 HOH 180 418 180 HOH HOH A . B 2 HOH 181 419 181 HOH HOH A . B 2 HOH 182 420 182 HOH HOH A . B 2 HOH 183 421 183 HOH HOH A . B 2 HOH 184 422 184 HOH HOH A . B 2 HOH 185 423 185 HOH HOH A . B 2 HOH 186 424 186 HOH HOH A . B 2 HOH 187 425 187 HOH HOH A . B 2 HOH 188 426 188 HOH HOH A . B 2 HOH 189 427 189 HOH HOH A . B 2 HOH 190 428 190 HOH HOH A . B 2 HOH 191 429 191 HOH HOH A . B 2 HOH 192 430 192 HOH HOH A . B 2 HOH 193 431 193 HOH HOH A . B 2 HOH 194 432 194 HOH HOH A . B 2 HOH 195 433 195 HOH HOH A . B 2 HOH 196 434 196 HOH HOH A . B 2 HOH 197 435 197 HOH HOH A . B 2 HOH 198 436 198 HOH HOH A . B 2 HOH 199 437 199 HOH HOH A . B 2 HOH 200 438 200 HOH HOH A . B 2 HOH 201 439 201 HOH HOH A . B 2 HOH 202 440 202 HOH HOH A . B 2 HOH 203 441 203 HOH HOH A . B 2 HOH 204 442 204 HOH HOH A . B 2 HOH 205 443 205 HOH HOH A . B 2 HOH 206 444 206 HOH HOH A . B 2 HOH 207 445 207 HOH HOH A . B 2 HOH 208 446 208 HOH HOH A . B 2 HOH 209 447 209 HOH HOH A . B 2 HOH 210 448 210 HOH HOH A . B 2 HOH 211 449 211 HOH HOH A . B 2 HOH 212 450 212 HOH HOH A . B 2 HOH 213 451 213 HOH HOH A . B 2 HOH 214 452 214 HOH HOH A . B 2 HOH 215 453 215 HOH HOH A . B 2 HOH 216 454 216 HOH HOH A . B 2 HOH 217 455 217 HOH HOH A . B 2 HOH 218 456 218 HOH HOH A . B 2 HOH 219 457 219 HOH HOH A . B 2 HOH 220 458 220 HOH HOH A . B 2 HOH 221 459 221 HOH HOH A . B 2 HOH 222 460 222 HOH HOH A . B 2 HOH 223 461 223 HOH HOH A . B 2 HOH 224 462 224 HOH HOH A . B 2 HOH 225 463 225 HOH HOH A . B 2 HOH 226 464 226 HOH HOH A . B 2 HOH 227 465 227 HOH HOH A . B 2 HOH 228 466 228 HOH HOH A . B 2 HOH 229 467 229 HOH HOH A . B 2 HOH 230 468 230 HOH HOH A . B 2 HOH 231 469 231 HOH HOH A . B 2 HOH 232 470 232 HOH HOH A . B 2 HOH 233 471 233 HOH HOH A . B 2 HOH 234 472 234 HOH HOH A . B 2 HOH 235 473 235 HOH HOH A . B 2 HOH 236 474 236 HOH HOH A . B 2 HOH 237 475 237 HOH HOH A . B 2 HOH 238 476 238 HOH HOH A . B 2 HOH 239 477 239 HOH HOH A . B 2 HOH 240 478 240 HOH HOH A . B 2 HOH 241 479 241 HOH HOH A . B 2 HOH 242 480 242 HOH HOH A . B 2 HOH 243 481 243 HOH HOH A . B 2 HOH 244 482 244 HOH HOH A . B 2 HOH 245 483 245 HOH HOH A . B 2 HOH 246 484 246 HOH HOH A . B 2 HOH 247 485 247 HOH HOH A . B 2 HOH 248 486 248 HOH HOH A . B 2 HOH 249 487 249 HOH HOH A . B 2 HOH 250 488 250 HOH HOH A . B 2 HOH 251 489 251 HOH HOH A . B 2 HOH 252 490 252 HOH HOH A . B 2 HOH 253 491 253 HOH HOH A . B 2 HOH 254 492 254 HOH HOH A . B 2 HOH 255 493 255 HOH HOH A . B 2 HOH 256 494 256 HOH HOH A . B 2 HOH 257 495 257 HOH HOH A . B 2 HOH 258 496 258 HOH HOH A . B 2 HOH 259 497 259 HOH HOH A . B 2 HOH 260 498 260 HOH HOH A . B 2 HOH 261 499 261 HOH HOH A . B 2 HOH 262 500 262 HOH HOH A . B 2 HOH 263 501 263 HOH HOH A . B 2 HOH 264 502 264 HOH HOH A . B 2 HOH 265 503 265 HOH HOH A . B 2 HOH 266 504 266 HOH HOH A . B 2 HOH 267 505 267 HOH HOH A . B 2 HOH 268 506 268 HOH HOH A . B 2 HOH 269 507 269 HOH HOH A . B 2 HOH 270 508 270 HOH HOH A . #