HEADER TRANSFERASE 10-JUL-08 3DRA TITLE CANDIDA ALBICANS PROTEIN GERANYLGERANYLTRANSFERASE-I COMPLEXED WITH TITLE 2 GGPP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN FARNESYLTRANSFERASE/GERANYLGERANYLTRANSFERASE TYPE- COMPND 3 1 SUBUNIT ALPHA; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: CAAX FARNESYLTRANSFERASE SUBUNIT ALPHA, RAS PROTEINS COMPND 6 PRENYLTRANSFERASE ALPHA, FTASE-ALPHA, TYPE I PROTEIN GERANYL- COMPND 7 GERANYLTRANSFERASE SUBUNIT ALPHA, GGTASE-I-ALPHA; COMPND 8 EC: 2.5.1.58, 2.5.1.59; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: GERANYLGERANYLTRANSFERASE TYPE I BETA SUBUNIT; COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 5476; SOURCE 5 GENE: RAM2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 10 ORGANISM_COMMON: YEAST; SOURCE 11 ORGANISM_TAXID: 5476; SOURCE 12 GENE: CDC43; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GERANYLGERANYLTRASFERASE, GERANYLGERANYLTRANSFERASE TYPE-I, GGTASE, KEYWDS 2 GGTASE-I, PGGT, PRENYLTRANSFERASE, FARNESYLTRANSFERASE, PRENYLATION, KEYWDS 3 GERANYLGERANYLPYROPHOSPHATE, GGPP, GERANYLGERANYL DIPHOSPHATE, KEYWDS 4 CANDIDA, CANDIDA ALBICANS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.HAST,L.S.BEESE REVDAT 3 21-FEB-24 3DRA 1 REMARK REVDAT 2 20-JAN-09 3DRA 1 JRNL VERSN REVDAT 1 30-SEP-08 3DRA 0 JRNL AUTH M.A.HAST,L.S.BEESE JRNL TITL STRUCTURE OF PROTEIN GERANYLGERANYLTRANSFERASE-I FROM THE JRNL TITL 2 HUMAN PATHOGEN CANDIDA ALBICANS COMPLEXED WITH A LIPID JRNL TITL 3 SUBSTRATE. JRNL REF J.BIOL.CHEM. V. 283 31933 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18713740 JRNL DOI 10.1074/JBC.M805330200 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0077 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 60658 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3226 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3441 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 206 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5582 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 471 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.135 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.095 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.008 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5764 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7800 ; 1.161 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 662 ; 5.054 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 307 ;35.948 ;25.016 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1024 ;13.449 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;13.945 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 832 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4384 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3324 ; 0.741 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5393 ; 1.428 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2440 ; 2.213 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2407 ; 3.599 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DRA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048390. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63895 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1500, PROPIONATE-CACODYLATE-BIS REMARK 280 -TRIS BUFFER, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.15200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.02450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.15200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.02450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 305 REMARK 465 VAL A 306 REMARK 465 MET B 1 REMARK 465 ASP B 176 REMARK 465 ASN B 177 REMARK 465 ASN B 178 REMARK 465 ASN B 179 REMARK 465 ASN B 180 REMARK 465 ASN B 181 REMARK 465 ASN B 182 REMARK 465 ARG B 183 REMARK 465 GLU B 184 REMARK 465 ASP B 185 REMARK 465 SER B 186 REMARK 465 ASN B 187 REMARK 465 GLU B 188 REMARK 465 LYS B 261 REMARK 465 ASP B 262 REMARK 465 GLY B 263 REMARK 465 ASN B 264 REMARK 465 GLY B 265 REMARK 465 ASP B 266 REMARK 465 GLY B 267 REMARK 465 ASN B 268 REMARK 465 GLY B 269 REMARK 465 ASN B 270 REMARK 465 GLY B 271 REMARK 465 ASP B 272 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO B 260 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 203 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 84 123.68 -37.95 REMARK 500 ASN A 121 54.86 36.14 REMARK 500 CYS A 216 85.01 -156.17 REMARK 500 LYS A 287 -53.61 -140.26 REMARK 500 ASN A 289 58.98 -151.15 REMARK 500 ASP B 28 13.95 -62.62 REMARK 500 THR B 85 -110.01 -99.20 REMARK 500 ASP B 90 78.85 -101.61 REMARK 500 ASN B 361 68.74 -172.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 391 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 294 OD2 REMARK 620 2 CYS B 296 SG 104.7 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 391 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GRG B 1721 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B3P A 307 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1N4P RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 ACCORDING TO THE AUTHORS THE GENES FOR THE SUBUNITS OF THE ENZYME REMARK 999 FROM THIS ORGANISM EXHIBIT SIGNIFICANT VARIATION ACROSS STRAINS AND REMARK 999 EVEN ALLELES. THE UNIPROT ENTRIES DO NOT MATCH ALL OBSERVATIONS OF REMARK 999 SEQUENCE VARIATION FOR THESE GENES IN THE LITERATURE. DBREF 3DRA A 1 306 UNP Q9Y765 FNTA_CANAL 1 306 DBREF 3DRA B 1 390 PDB 3DRA 3DRA 1 390 SEQADV 3DRA ASP A 131 UNP Q9Y765 PRO 131 SEE REMARK 999 SEQADV 3DRA ASN A 289 UNP Q9Y765 ASP 289 SEE REMARK 999 SEQRES 1 A 306 MET THR ASP SER LYS TYR ASP TYR SER ASP ILE THR PRO SEQRES 2 A 306 VAL ASP ILE ASN THR GLU GLU PRO GLN ILE CYS GLN ILE SEQRES 3 A 306 LEU TYR ASP GLU ASP TYR LYS GLN ILE MET GLY LEU LEU SEQRES 4 A 306 LEU ALA LEU MET LYS ALA GLU GLU TYR SER GLU ARG ALA SEQRES 5 A 306 LEU HIS ILE THR GLU LEU GLY ILE ASN GLU LEU ALA SER SEQRES 6 A 306 HIS TYR THR ILE TRP ILE TYR ARG PHE ASN ILE LEU LYS SEQRES 7 A 306 ASN LEU PRO ASN ARG ASN LEU TYR ASP GLU LEU ASP TRP SEQRES 8 A 306 CYS GLU GLU ILE ALA LEU ASP ASN GLU LYS ASN TYR GLN SEQRES 9 A 306 ILE TRP ASN TYR ARG GLN LEU ILE ILE GLY GLN ILE MET SEQRES 10 A 306 GLU LEU ASN ASN ASN ASP PHE ASP PRO TYR ARG GLU PHE SEQRES 11 A 306 ASP ILE LEU GLU ALA MET LEU SER SER ASP PRO LYS ASN SEQRES 12 A 306 HIS HIS VAL TRP SER TYR ARG LYS TRP LEU VAL ASP THR SEQRES 13 A 306 PHE ASP LEU HIS ASN ASP ALA LYS GLU LEU SER PHE VAL SEQRES 14 A 306 ASP LYS VAL ILE ASP THR ASP LEU LYS ASN ASN SER ALA SEQRES 15 A 306 TRP SER HIS ARG PHE PHE LEU LEU PHE SER LYS LYS HIS SEQRES 16 A 306 LEU ALA THR ASP ASN THR ILE ASP GLU GLU LEU ASN TYR SEQRES 17 A 306 VAL LYS ASP LYS ILE VAL LYS CYS PRO GLN ASN PRO SER SEQRES 18 A 306 THR TRP ASN TYR LEU LEU GLY ILE HIS GLU ARG PHE ASP SEQRES 19 A 306 ARG SER ILE THR GLN LEU GLU GLU PHE SER LEU GLN PHE SEQRES 20 A 306 VAL ASP LEU GLU LYS ASP GLN VAL THR SER SER PHE ALA SEQRES 21 A 306 LEU GLU THR LEU ALA LYS ILE TYR THR GLN GLN LYS LYS SEQRES 22 A 306 TYR ASN GLU SER ARG THR VAL TYR ASP LEU LEU LYS SER SEQRES 23 A 306 LYS TYR ASN PRO ILE ARG SER ASN PHE TRP ASP TYR GLN SEQRES 24 A 306 ILE SER LYS LEU THR SER VAL SEQRES 1 B 390 MET ASN GLN LEU LEU ILE ASN LYS HIS GLU LYS PHE PHE SEQRES 2 B 390 ASN ARG CYS LEU ILE GLY LEU PRO SER THR ALA GLN SER SEQRES 3 B 390 GLU ASP SER ASN LYS LEU ALA ILE ILE TYR PHE CYS LEU SEQRES 4 B 390 HIS GLY LEU GLN LEU ILE GLN LYS PHE GLN PHE THR ASN SEQRES 5 B 390 GLN GLU LEU ILE TYR TYR ARG ASN PHE ILE ILE ASN GLN SEQRES 6 B 390 PHE MET ILE GLU ASN ASN GLN ILE ILE SER PHE ARG SER SEQRES 7 B 390 THR HIS TYR PHE GLN LYS THR ASN GLN LYS TYR ASP CYS SEQRES 8 B 390 PRO ASN LEU SER SER THR LEU PHE ALA LEU TYR ASN LEU SEQRES 9 B 390 LEU ILE LEU LYS SER PRO TYR HIS THR ILE ILE ASN ARG SEQRES 10 B 390 LYS LYS ILE MET ASN PHE LEU CYS LYS CYS GLN VAL LYS SEQRES 11 B 390 ASP GLY ILE ASN LYS GLY GLY PHE VAL PRO THR LEU TYR SEQRES 12 B 390 TYR ASN GLU GLU ASN GLY ASP TYR LYS GLN TYR GLY GLU SEQRES 13 B 390 PRO ASP LEU ARG VAL CYS TYR MET ALA LEU LEU ILE ARG SEQRES 14 B 390 HIS LEU MET LYS TYR ASP ASP ASN ASN ASN ASN ASN ASN SEQRES 15 B 390 ARG GLU ASP SER ASN GLU THR ASP ILE ASP LEU ILE SER SEQRES 16 B 390 LEU GLN GLN PHE ILE LEU ASP ARG ILE ASN ILE ASN GLY SEQRES 17 B 390 GLY PHE SER SER THR ILE MET ASP GLU SER HIS LEU GLY SEQRES 18 B 390 PHE THR PHE CYS ALA ILE ALA SER LEU LYS LEU LEU ASN SEQRES 19 B 390 TYR PRO LEU GLU LYS LEU LYS SER THR LYS GLU TRP LEU SEQRES 20 B 390 ILE HIS ARG GLN VAL ASP TYR PRO GLU ASN LEU TYR PRO SEQRES 21 B 390 LYS ASP GLY ASN GLY ASP GLY ASN GLY ASN GLY ASP ASN SEQRES 22 B 390 TYR GLU TYR TYR ARG ASN ILE ASP ILE GLY GLY PHE ASN SEQRES 23 B 390 GLY ARG GLU ASN LYS LEU SER ASP THR CYS TYR SER TRP SEQRES 24 B 390 TRP CYS THR GLY SER LEU TYR ASN ILE ASP VAL ASN PHE SEQRES 25 B 390 ILE LYS LEU VAL ASP LEU ASN LYS ALA GLU ASP TYR LEU SEQRES 26 B 390 LEU ASN LYS THR GLN ASN GLN LEU PHE GLY GLY PHE GLY SEQRES 27 B 390 ARG ASP PRO ASP SER THR PRO ASP PRO MET HIS SER TYR SEQRES 28 B 390 LEU ALA LEU ALA SER LEU SER LEU TRP ASN HIS GLU LYS SEQRES 29 B 390 PHE ALA LEU GLN GLU ILE ASN PRO ILE LEU THR ILE THR SEQRES 30 B 390 LYS GLU SER TYR GLN PHE PHE LYS GLU GLU ILE LYS TYR HET B3P A 307 19 HET ZN B 391 1 HET GRG B1721 29 HETNAM B3P 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)- HETNAM 2 B3P PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM ZN ZINC ION HETNAM GRG GERANYLGERANYL DIPHOSPHATE FORMUL 3 B3P C11 H26 N2 O6 FORMUL 4 ZN ZN 2+ FORMUL 5 GRG C20 H36 O7 P2 FORMUL 6 HOH *471(H2 O) HELIX 1 1 ASP A 29 ALA A 45 1 17 HELIX 2 2 SER A 49 LEU A 63 1 15 HELIX 3 3 HIS A 66 ASN A 79 1 14 HELIX 4 4 ASN A 84 ASN A 99 1 16 HELIX 5 5 GLN A 104 ASN A 120 1 17 HELIX 6 6 PRO A 126 ASP A 140 1 15 HELIX 7 7 ASN A 143 PHE A 157 1 15 HELIX 8 8 ASP A 162 ASP A 176 1 15 HELIX 9 9 ASN A 179 SER A 192 1 14 HELIX 10 10 LYS A 193 ALA A 197 5 5 HELIX 11 11 THR A 198 CYS A 216 1 19 HELIX 12 12 ASN A 219 PHE A 233 1 15 HELIX 13 13 SER A 236 GLN A 239 5 4 HELIX 14 14 LEU A 240 GLN A 246 1 7 HELIX 15 15 LEU A 250 ASP A 253 5 4 HELIX 16 16 SER A 257 GLN A 271 1 15 HELIX 17 17 LYS A 273 LYS A 287 1 15 HELIX 18 18 ASN A 289 ILE A 291 5 3 HELIX 19 19 ARG A 292 LYS A 302 1 11 HELIX 20 20 LEU B 5 GLY B 19 1 15 HELIX 21 21 PRO B 21 ASP B 28 5 8 HELIX 22 22 ASN B 30 ILE B 45 1 16 HELIX 23 23 THR B 51 PHE B 66 1 16 HELIX 24 24 THR B 79 THR B 85 5 7 HELIX 25 25 ASN B 93 LEU B 107 1 15 HELIX 26 26 PRO B 110 ILE B 114 5 5 HELIX 27 27 ASN B 116 GLN B 128 1 13 HELIX 28 28 ASP B 158 MET B 172 1 15 HELIX 29 29 ASP B 192 ASP B 202 1 11 HELIX 30 30 HIS B 219 LEU B 233 1 15 HELIX 31 31 PRO B 236 LYS B 239 5 4 HELIX 32 32 LEU B 240 HIS B 249 1 10 HELIX 33 33 ARG B 278 ILE B 282 5 5 HELIX 34 34 THR B 295 ASP B 309 1 15 HELIX 35 35 VAL B 310 VAL B 316 5 7 HELIX 36 36 ASP B 317 LYS B 328 1 12 HELIX 37 37 ASP B 346 ALA B 366 1 21 HELIX 38 38 LYS B 378 ILE B 388 1 11 SHEET 1 A 2 VAL A 248 ASP A 249 0 SHEET 2 A 2 GLN A 254 VAL A 255 -1 O GLN A 254 N ASP A 249 SHEET 1 B 2 MET B 67 GLU B 69 0 SHEET 2 B 2 ILE B 74 PHE B 76 -1 O SER B 75 N ILE B 68 SHEET 1 C 2 THR B 141 ASN B 145 0 SHEET 2 C 2 ASP B 150 TYR B 154 -1 O ASP B 150 N ASN B 145 SHEET 1 D 2 ILE B 370 ASN B 371 0 SHEET 2 D 2 ILE B 376 THR B 377 -1 O ILE B 376 N ASN B 371 LINK OD2 ASP B 294 ZN ZN B 391 1555 1555 2.22 LINK SG CYS B 296 ZN ZN B 391 1555 1555 2.45 SITE 1 AC1 3 ASP B 294 CYS B 296 HIS B 349 SITE 1 AC2 8 TYR B 163 HIS B 219 GLY B 221 CYS B 225 SITE 2 AC2 8 ARG B 288 LYS B 291 TYR B 297 ARG B 339 SITE 1 AC3 11 ASP A 29 ASP A 31 TYR A 32 ASN A 61 SITE 2 AC3 11 GLU A 62 ASN A 99 ASP A 125 TYR A 127 SITE 3 AC3 11 LYS A 164 GLN B 25 SER B 26 CRYST1 132.304 66.049 82.821 90.00 100.02 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007558 0.000000 0.001335 0.00000 SCALE2 0.000000 0.015140 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012261 0.00000