HEADER PEPTIDE BINDING PROTEIN 11-JUL-08 3DRJ TITLE CRYSTAL STRUCTURE OF LACTOCOCCAL OPPA CO-CRYSTALLIZED WITH PTH-RELATED TITLE 2 PEPTIDE IN AN OPEN CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: OLIGOPEPTIDE-BINDING PROTEIN OPPA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PTH-RELATED PEPTIDE; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS; SOURCE 3 ORGANISM_TAXID: 416870; SOURCE 4 STRAIN: SUBSP. CREMORIS MG1363; SOURCE 5 GENE: OPPA, LLMG_0701; SOURCE 6 EXPRESSION_SYSTEM: LACTOCOCCUS LACTIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1358; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: MG1363; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PAMP21; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: CHEMICALLY SYNTHESIS KEYWDS OLIGO-PEPTIDE BINDING, VOLUMINOUS BINDING CAVITY, VENUS FLY-TRAP, KEYWDS 2 PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.P.-A.BERNTSSON,M.K.DOEVEN,R.H.DUURKENS,D.SENGUPTA,S.-J.MARRINK,A.- AUTHOR 2 M.THUNNISSEN,B.POOLMAN,D.-J.SLOTBOOM REVDAT 4 01-NOV-23 3DRJ 1 SEQADV REVDAT 3 05-FEB-14 3DRJ 1 JRNL REVDAT 2 13-JUL-11 3DRJ 1 VERSN REVDAT 1 31-MAR-09 3DRJ 0 JRNL AUTH R.P.-A.BERNTSSON,M.K.DOEVEN,F.FUSETTI,R.H.DUURKENS, JRNL AUTH 2 D.SENGUPTA,S.-J.MARRINK,A.-M.THUNNISSEN,B.POOLMAN, JRNL AUTH 3 D.-J.SLOTBOOM JRNL TITL THE STRUCTURAL BASIS FOR PEPTIDE SELECTION BY THE TRANSPORT JRNL TITL 2 RECEPTOR OPPA JRNL REF EMBO J. V. 28 1332 2009 JRNL REFN ISSN 0261-4189 JRNL PMID 19300437 JRNL DOI 10.1038/EMBOJ.2009.65 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 85971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4288 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5723 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.1880 REMARK 3 BIN FREE R VALUE SET COUNT : 308 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4392 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 901 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 20.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.075 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.083 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.050 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.491 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4545 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3046 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6166 ; 1.563 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7489 ; 0.923 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 575 ; 6.486 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 200 ;37.963 ;25.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 775 ;12.639 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;21.095 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 660 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5119 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 872 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2841 ; 0.880 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1158 ; 0.257 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4575 ; 1.542 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1704 ; 2.344 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1591 ; 3.539 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 299 REMARK 3 ORIGIN FOR THE GROUP (A): 2.8580 3.9340 -4.8250 REMARK 3 T TENSOR REMARK 3 T11: 0.0132 T22: 0.0111 REMARK 3 T33: 0.0251 T12: 0.0124 REMARK 3 T13: 0.0046 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.5148 L22: 0.6625 REMARK 3 L33: 0.5787 L12: 0.0774 REMARK 3 L13: 0.2678 L23: -0.1620 REMARK 3 S TENSOR REMARK 3 S11: 0.0481 S12: 0.0974 S13: -0.0531 REMARK 3 S21: 0.1587 S22: 0.0384 S23: 0.0419 REMARK 3 S31: -0.0171 S32: -0.0556 S33: -0.0865 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 300 A 470 REMARK 3 ORIGIN FOR THE GROUP (A): -0.2760 32.3630 19.7050 REMARK 3 T TENSOR REMARK 3 T11: 0.0110 T22: 0.0231 REMARK 3 T33: 0.0305 T12: -0.0014 REMARK 3 T13: 0.0115 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.3193 L22: 0.5829 REMARK 3 L33: 0.7218 L12: 0.0716 REMARK 3 L13: -0.2358 L23: -0.2866 REMARK 3 S TENSOR REMARK 3 S11: 0.0249 S12: -0.0831 S13: 0.0202 REMARK 3 S21: 0.0661 S22: 0.0283 S23: 0.0779 REMARK 3 S31: -0.0335 S32: 0.0562 S33: -0.0531 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 471 A 572 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3710 21.6720 4.8490 REMARK 3 T TENSOR REMARK 3 T11: 0.0459 T22: 0.0185 REMARK 3 T33: 0.0143 T12: 0.0077 REMARK 3 T13: 0.0041 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.2847 L22: 1.2195 REMARK 3 L33: 0.1505 L12: -0.0884 REMARK 3 L13: 0.1140 L23: 0.3181 REMARK 3 S TENSOR REMARK 3 S11: 0.0265 S12: -0.0021 S13: 0.0310 REMARK 3 S21: -0.0378 S22: 0.0551 S23: -0.0253 REMARK 3 S31: 0.0557 S32: -0.0091 S33: -0.0817 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3DRJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048398. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.931 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC Q210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86038 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 37.165 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.03300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.19100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3DRF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 0.1M NA-HEPES, 20% PEG REMARK 280 6000, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 61.67800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 ASN A 4 REMARK 465 GLN A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 SER A 10 REMARK 465 THR A 11 REMARK 465 LYS A 12 REMARK 465 LYS A 13 REMARK 465 LYS A 574 REMARK 465 LEU A 575 REMARK 465 ALA A 576 REMARK 465 THR A 577 REMARK 465 LYS A 578 REMARK 465 GLY A 579 REMARK 465 SER A 580 REMARK 465 ILE A 581 REMARK 465 GLU A 582 REMARK 465 GLY A 583 REMARK 465 ARG A 584 REMARK 465 HIS A 585 REMARK 465 HIS A 586 REMARK 465 HIS A 587 REMARK 465 HIS A 588 REMARK 465 HIS A 589 REMARK 465 HIS A 590 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 215 -71.22 -131.83 REMARK 500 GLU A 233 -55.65 -122.99 REMARK 500 GLN A 282 -2.34 -45.97 REMARK 500 THR A 325 146.25 -170.25 REMARK 500 ASN A 341 59.87 -111.06 REMARK 500 THR A 539 -73.87 -106.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DRF RELATED DB: PDB REMARK 900 RELATED ID: 3DRG RELATED DB: PDB REMARK 900 RELATED ID: 3DRH RELATED DB: PDB REMARK 900 RELATED ID: 3DRI RELATED DB: PDB REMARK 900 RELATED ID: 3DRK RELATED DB: PDB DBREF 3DRJ A 2 578 UNP A2RJ53 A2RJ53_LACLM 24 600 DBREF 3DRJ B 1 5 PDB 3DRJ 3DRJ 1 5 SEQADV 3DRJ MET A 1 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ GLY A 579 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ SER A 580 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ ILE A 581 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ GLU A 582 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ GLY A 583 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ ARG A 584 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ HIS A 585 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ HIS A 586 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ HIS A 587 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ HIS A 588 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ HIS A 589 UNP A2RJ53 EXPRESSION TAG SEQADV 3DRJ HIS A 590 UNP A2RJ53 EXPRESSION TAG SEQRES 1 A 590 MET GLY SER ASN GLN SER SER SER THR SER THR LYS LYS SEQRES 2 A 590 LEU LYS ALA GLY ASN PHE ASP VAL ALA TYR GLN ASN PRO SEQRES 3 A 590 ASP LYS ALA ILE LYS GLY GLY ASN LEU LYS VAL ALA TYR SEQRES 4 A 590 GLN SER ASP SER PRO MET LYS ALA GLN TRP LEU SER GLY SEQRES 5 A 590 LEU SER ASN ASP ALA THR PHE ALA THR MET SER GLY PRO SEQRES 6 A 590 GLY GLY GLY GLN ASP GLY LEU PHE PHE THR ASP SER GLY SEQRES 7 A 590 PHE LYS PHE ILE LYS GLY GLY ALA ALA ASP VAL ALA LEU SEQRES 8 A 590 ASP LYS GLU SER LYS THR ALA THR ILE THR LEU ARG LYS SEQRES 9 A 590 ASP LEU LYS TRP SER ASP GLY SER GLU VAL THR ALA LYS SEQRES 10 A 590 ASP TYR GLU PHE THR TYR GLU THR ILE ALA ASN PRO ALA SEQRES 11 A 590 TYR GLY SER ASP ARG TRP THR ASP SER LEU ALA ASN ILE SEQRES 12 A 590 VAL GLY LEU SER ASP TYR HIS THR GLY LYS ALA LYS THR SEQRES 13 A 590 ILE SER GLY ILE THR PHE PRO ASP GLY GLU ASN GLY LYS SEQRES 14 A 590 VAL ILE LYS VAL GLN PHE LYS GLU MET LYS PRO GLY MET SEQRES 15 A 590 THR GLN SER GLY ASN GLY TYR PHE LEU GLU THR VAL ALA SEQRES 16 A 590 PRO TYR GLN TYR LEU LYS ASP VAL ALA PRO LYS ASP LEU SEQRES 17 A 590 ALA SER SER PRO LYS THR THR THR LYS PRO LEU VAL THR SEQRES 18 A 590 GLY PRO PHE LYS PRO GLU ASN VAL VAL ALA GLY GLU SER SEQRES 19 A 590 ILE LYS TYR VAL PRO ASN PRO TYR TYR TRP GLY GLU LYS SEQRES 20 A 590 PRO LYS LEU ASN SER ILE THR TYR GLU VAL VAL SER THR SEQRES 21 A 590 ALA LYS SER VAL ALA ALA LEU SER SER SER LYS TYR ASP SEQRES 22 A 590 ILE ILE ASN GLY MET VAL SER SER GLN TYR LYS GLN VAL SEQRES 23 A 590 LYS ASN LEU LYS GLY TYR LYS VAL LEU GLY GLN GLN ALA SEQRES 24 A 590 MET TYR ILE SER LEU MET TYR TYR ASN LEU GLY HIS TYR SEQRES 25 A 590 ASP ALA LYS ASN SER ILE ASN VAL GLN ASP ARG LYS THR SEQRES 26 A 590 PRO LEU GLN ASP GLN ASN VAL ARG GLN ALA ILE GLY TYR SEQRES 27 A 590 ALA ARG ASN VAL ALA GLU VAL ASP ASN LYS PHE SER ASN SEQRES 28 A 590 GLY LEU SER THR PRO ALA ASN SER LEU ILE PRO PRO ILE SEQRES 29 A 590 PHE LYS GLN PHE THR SER SER SER VAL LYS GLY TYR GLU SEQRES 30 A 590 LYS GLN ASP LEU ASP LYS ALA ASN LYS LEU LEU ASP GLU SEQRES 31 A 590 ASP GLY TRP LYS LEU ASN LYS SER THR GLY TYR ARG GLU SEQRES 32 A 590 LYS ASP GLY LYS GLU LEU SER LEU VAL TYR ALA ALA ARG SEQRES 33 A 590 VAL GLY ASP ALA ASN ALA GLU THR ILE ALA GLN ASN TYR SEQRES 34 A 590 ILE GLN GLN TRP LYS LYS ILE GLY VAL LYS VAL SER LEU SEQRES 35 A 590 TYR ASN GLY LYS LEU MET GLU PHE ASN SER TRP VAL ASP SEQRES 36 A 590 HIS MET THR THR PRO PRO GLY ALA ASN ASP TRP ASP ILE SEQRES 37 A 590 THR ASP GLY SER TRP SER LEU ALA SER GLU PRO SER GLN SEQRES 38 A 590 GLN ASP LEU PHE SER ALA ALA ALA PRO TYR ASN PHE GLY SEQRES 39 A 590 HIS PHE ASN ASP SER GLU ILE THR LYS ASP LEU ASN ASP SEQRES 40 A 590 ILE ASP SER ALA LYS SER GLU ASN PRO THR TYR ARG LYS SEQRES 41 A 590 ALA ALA PHE VAL LYS TYR GLN GLU ASP MET ASN LYS LYS SEQRES 42 A 590 ALA TYR VAL ILE PRO THR ASN PHE MET LEU ASN TYR THR SEQRES 43 A 590 PRO VAL ASN LYS ARG VAL VAL GLY MET THR LEU ASP TYR SEQRES 44 A 590 GLY ALA MET ASN THR TRP SER GLU ILE GLY VAL SER SER SEQRES 45 A 590 ALA LYS LEU ALA THR LYS GLY SER ILE GLU GLY ARG HIS SEQRES 46 A 590 HIS HIS HIS HIS HIS SEQRES 1 B 5 ALA HIS ALA LYS ALA FORMUL 3 HOH *901(H2 O) HELIX 1 1 LEU A 50 SER A 54 5 5 HELIX 2 2 ASP A 56 SER A 63 1 8 HELIX 3 3 GLY A 64 GLY A 67 5 4 HELIX 4 4 THR A 115 ASN A 128 1 14 HELIX 5 5 PRO A 129 GLY A 132 5 4 HELIX 6 6 THR A 137 ILE A 143 5 7 HELIX 7 7 GLY A 145 THR A 151 1 7 HELIX 8 8 LYS A 179 GLN A 184 5 6 HELIX 9 9 PRO A 196 LYS A 201 1 6 HELIX 10 10 ALA A 204 LEU A 208 5 5 HELIX 11 11 SER A 211 THR A 215 5 5 HELIX 12 12 LYS A 262 SER A 269 1 8 HELIX 13 13 GLN A 282 ASN A 288 1 7 HELIX 14 14 THR A 325 GLN A 328 5 4 HELIX 15 15 ASP A 329 ARG A 340 1 12 HELIX 16 16 ASN A 341 SER A 350 1 10 HELIX 17 17 PHE A 365 THR A 369 5 5 HELIX 18 18 ASP A 380 ASP A 391 1 12 HELIX 19 19 ASN A 421 ILE A 436 1 16 HELIX 20 20 ASN A 444 LYS A 446 5 3 HELIX 21 21 GLU A 449 THR A 459 1 11 HELIX 22 22 GLN A 481 SER A 486 1 6 HELIX 23 23 ASP A 498 ASP A 509 1 12 HELIX 24 24 SER A 510 GLU A 514 5 5 HELIX 25 25 ASN A 515 ALA A 534 1 20 HELIX 26 26 ASN A 563 ILE A 568 1 6 SHEET 1 A 2 LYS A 15 ALA A 16 0 SHEET 2 A 2 PHE A 19 ASP A 20 -1 O PHE A 19 N ALA A 16 SHEET 1 B 5 PHE A 224 VAL A 230 0 SHEET 2 B 5 SER A 234 PRO A 239 -1 O VAL A 238 N LYS A 225 SHEET 3 B 5 SER A 252 VAL A 258 -1 O ILE A 253 N TYR A 237 SHEET 4 B 5 ASN A 34 GLN A 40 1 N VAL A 37 O THR A 254 SHEET 5 B 5 ILE A 274 ASN A 276 1 O ASN A 276 N ALA A 38 SHEET 1 C 2 PHE A 74 THR A 75 0 SHEET 2 C 2 PHE A 81 ILE A 82 -1 O ILE A 82 N PHE A 74 SHEET 1 D 4 ALA A 87 ASP A 92 0 SHEET 2 D 4 THR A 97 LEU A 102 -1 O THR A 99 N ALA A 90 SHEET 3 D 4 VAL A 170 GLN A 174 -1 O VAL A 173 N ALA A 98 SHEET 4 D 4 ILE A 160 THR A 161 -1 N THR A 161 O LYS A 172 SHEET 1 E 3 TYR A 292 GLN A 298 0 SHEET 2 E 3 ASN A 540 ASN A 549 -1 O ASN A 544 N GLN A 297 SHEET 3 E 3 SER A 354 PRO A 356 -1 N THR A 355 O PHE A 541 SHEET 1 F 5 LYS A 439 LEU A 442 0 SHEET 2 F 5 SER A 410 ALA A 414 1 N TYR A 413 O SER A 441 SHEET 3 F 5 ILE A 468 SER A 474 1 O ILE A 468 N ALA A 414 SHEET 4 F 5 TYR A 301 TYR A 307 -1 N TYR A 306 O THR A 469 SHEET 5 F 5 VAL A 536 PRO A 538 -1 O ILE A 537 N MET A 305 SHEET 1 G 4 LYS A 439 LEU A 442 0 SHEET 2 G 4 SER A 410 ALA A 414 1 N TYR A 413 O SER A 441 SHEET 3 G 4 ILE A 468 SER A 474 1 O ILE A 468 N ALA A 414 SHEET 4 G 4 ALA B 3 LYS B 4 -1 O ALA B 3 N SER A 474 SHEET 1 H 2 HIS A 311 ASP A 313 0 SHEET 2 H 2 ILE A 318 VAL A 320 -1 O ILE A 318 N ASP A 313 SHEET 1 I 3 LYS A 394 LEU A 395 0 SHEET 2 I 3 ARG A 402 LYS A 404 -1 O GLU A 403 N LYS A 394 SHEET 3 I 3 LYS A 407 GLU A 408 -1 O LYS A 407 N LYS A 404 SHEET 1 J 2 VAL A 552 VAL A 553 0 SHEET 2 J 2 GLY A 569 VAL A 570 -1 O GLY A 569 N VAL A 553 CISPEP 1 PRO A 460 PRO A 461 0 4.80 CRYST1 40.140 123.356 59.704 90.00 103.91 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024913 0.000000 0.006168 0.00000 SCALE2 0.000000 0.008107 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017255 0.00000