HEADER RNA 11-JUL-08 3DS7 TITLE STRUCTURE OF AN RNA-2'-DEOXYGUANOSINE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 67-MER; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: 2'-DEOXYGUANOSINE BINDING RNA SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE IS SYNTHETIC DERIVED FROM A MUTAGENESIS SOURCE 4 STUDY KEYWDS RNA, RNA-LIGAND COMPLEX, RIBOSWITCH EXPDTA X-RAY DIFFRACTION AUTHOR A.L.EDWARDS,R.T.BATEY REVDAT 2 30-AUG-23 3DS7 1 REMARK REVDAT 1 17-FEB-09 3DS7 0 JRNL AUTH A.L.EDWARDS,R.T.BATEY JRNL TITL A STRUCTURAL BASIS FOR THE RECOGNITION OF 2'-DEOXYGUANOSINE JRNL TITL 2 BY THE PURINE RIBOSWITCH. JRNL REF J.MOL.BIOL. V. 385 938 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19007790 JRNL DOI 10.1016/J.JMB.2008.10.074 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 518064.880 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 29005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2894 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4165 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 482 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 2853 REMARK 3 HETEROGEN ATOMS : 123 REMARK 3 SOLVENT ATOMS : 622 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.69000 REMARK 3 B22 (A**2) : -0.76000 REMARK 3 B33 (A**2) : 2.44000 REMARK 3 B12 (A**2) : 0.80000 REMARK 3 B13 (A**2) : -0.28000 REMARK 3 B23 (A**2) : 2.34000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.24 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.021 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 17.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.580 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.45 REMARK 3 BSOL : 74.78 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : ACETATE.PARAM REMARK 3 PARAMETER FILE 4 : GNG.PARAM REMARK 3 PARAMETER FILE 5 : COHEX4.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : WATER.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : ACETATE.TOP REMARK 3 TOPOLOGY FILE 4 : GNG.TOP REMARK 3 TOPOLOGY FILE 5 : COHEX4.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3DS7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048421. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29177 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 19.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 3.560 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.57 REMARK 200 R MERGE FOR SHELL (I) : 0.29700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB 1U8D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01M K-HEPES, 0.0119 M COBALT(III) REMARK 280 HEXAMMINE, 22% PEG 2000, 0.66M AMMONIUM ACETATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1513 O HOH B 1604 1.96 REMARK 500 O HOH A 1321 O HOH A 1366 2.04 REMARK 500 O2' A B 273 O HOH B 1208 2.06 REMARK 500 O HOH B 1138 O HOH B 1222 2.12 REMARK 500 OP2 U B 277 O HOH B 1184 2.14 REMARK 500 O HOH B 1033 O HOH B 1608 2.15 REMARK 500 O HOH A 1124 O HOH B 1244 2.15 REMARK 500 O HOH A 1119 O HOH A 1508 2.15 REMARK 500 O HOH B 1041 O HOH B 1092 2.16 REMARK 500 O HOH A 1215 O HOH A 1476 2.16 REMARK 500 O HOH A 1180 O HOH A 1476 2.19 REMARK 500 O HOH A 1005 O HOH A 1353 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 G A 29 C2 G A 29 N2 0.070 REMARK 500 G A 31 C2 G A 31 N3 0.054 REMARK 500 G A 31 N7 G A 31 C8 0.054 REMARK 500 G A 38 C2' G A 38 O2' 0.072 REMARK 500 A A 40 C6 A A 40 N6 0.106 REMARK 500 G A 56 C6 G A 56 O6 0.056 REMARK 500 C A 60 C2 C A 60 O2 0.060 REMARK 500 C A 61 C4 C A 61 N4 0.055 REMARK 500 A A 65 C6 A A 65 N6 0.057 REMARK 500 A A 66 C2 A A 66 N3 0.066 REMARK 500 G A 68 C2 G A 68 N3 0.054 REMARK 500 U B 230 C4 U B 230 C5 0.065 REMARK 500 A B 233 C2 A B 233 N3 0.082 REMARK 500 C B 239 N3 C B 239 C4 0.056 REMARK 500 G B 255 C2 G B 255 N3 0.061 REMARK 500 G B 257 C5 G B 257 C6 0.061 REMARK 500 C B 258 C2 C B 258 O2 0.069 REMARK 500 C B 261 C2 C B 261 N3 0.058 REMARK 500 A B 265 C6 A B 265 N1 0.048 REMARK 500 A B 266 C6 A B 266 N6 0.048 REMARK 500 G B 272 C5 G B 272 N7 0.040 REMARK 500 A B 276 C5' A B 276 C4' -0.043 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G A 27 O3' - P - OP2 ANGL. DEV. = 7.8 DEGREES REMARK 500 U A 34 O4' - C1' - N1 ANGL. DEV. = 5.2 DEGREES REMARK 500 A A 44 O3' - P - OP2 ANGL. DEV. = 6.8 DEGREES REMARK 500 C A 54 O5' - P - OP2 ANGL. DEV. = -6.9 DEGREES REMARK 500 C A 54 C5' - C4' - C3' ANGL. DEV. = 14.6 DEGREES REMARK 500 G A 56 O5' - P - OP2 ANGL. DEV. = -6.6 DEGREES REMARK 500 C A 61 O3' - P - OP2 ANGL. DEV. = 7.9 DEGREES REMARK 500 G A 62 N9 - C1' - C2' ANGL. DEV. = 7.9 DEGREES REMARK 500 A A 66 N9 - C1' - C2' ANGL. DEV. = -6.6 DEGREES REMARK 500 U A 67 O5' - P - OP2 ANGL. DEV. = -5.5 DEGREES REMARK 500 U A 67 C5' - C4' - O4' ANGL. DEV. = 7.0 DEGREES REMARK 500 U A 69 O3' - P - OP2 ANGL. DEV. = 8.0 DEGREES REMARK 500 A A 73 O3' - P - OP2 ANGL. DEV. = 7.0 DEGREES REMARK 500 C B 222 C2' - C3' - O3' ANGL. DEV. = 18.0 DEGREES REMARK 500 U B 234 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 C B 249 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 A B 276 O3' - P - OP2 ANGL. DEV. = 9.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 A A 21 0.06 SIDE CHAIN REMARK 500 C A 22 0.07 SIDE CHAIN REMARK 500 U A 34 0.07 SIDE CHAIN REMARK 500 U A 36 0.08 SIDE CHAIN REMARK 500 G A 38 0.09 SIDE CHAIN REMARK 500 A A 45 0.08 SIDE CHAIN REMARK 500 C A 53 0.08 SIDE CHAIN REMARK 500 A A 65 0.06 SIDE CHAIN REMARK 500 A A 66 0.06 SIDE CHAIN REMARK 500 G A 68 0.08 SIDE CHAIN REMARK 500 C A 70 0.08 SIDE CHAIN REMARK 500 A A 73 0.06 SIDE CHAIN REMARK 500 A B 224 0.06 SIDE CHAIN REMARK 500 G B 229 0.07 SIDE CHAIN REMARK 500 G B 238 0.08 SIDE CHAIN REMARK 500 C B 243 0.08 SIDE CHAIN REMARK 500 C B 261 0.07 SIDE CHAIN REMARK 500 A B 265 0.06 SIDE CHAIN REMARK 500 A B 266 0.07 SIDE CHAIN REMARK 500 U B 269 0.09 SIDE CHAIN REMARK 500 C B 270 0.08 SIDE CHAIN REMARK 500 A B 273 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 96 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 296 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNG A 120 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNG B 320 DBREF 3DS7 A 15 81 PDB 3DS7 3DS7 15 81 DBREF 3DS7 B 215 281 PDB 3DS7 3DS7 215 281 SEQRES 1 A 67 G G A C A U A C A A U C G SEQRES 2 A 67 C G U G G A U A U G G C A SEQRES 3 A 67 C G C A A G A U C C C G C SEQRES 4 A 67 C G G G C A C C G U A A A SEQRES 5 A 67 U G U C C G A C U A U G U SEQRES 6 A 67 C C SEQRES 1 B 67 G G A C A U A C A A U C G SEQRES 2 B 67 C G U G G A U A U G G C A SEQRES 3 B 67 C G C A A G A U C C C G C SEQRES 4 B 67 C G G G C A C C G U A A A SEQRES 5 B 67 U G U C C G A C U A U G U SEQRES 6 B 67 C C HET ACT A 96 4 HET NCO A 101 7 HET NCO A 102 7 HET NCO A 103 7 HET NCO A 104 7 HET NCO A 105 7 HET GNG A 120 19 HET ACT B 296 4 HET NCO B 301 7 HET NCO B 302 7 HET NCO B 303 7 HET NCO B 304 7 HET NCO B 305 7 HET NCO B 306 7 HET GNG B 320 19 HETNAM ACT ACETATE ION HETNAM NCO COBALT HEXAMMINE(III) HETNAM GNG 2'-DEOXY-GUANOSINE FORMUL 3 ACT 2(C2 H3 O2 1-) FORMUL 4 NCO 11(CO H18 N6 3+) FORMUL 9 GNG 2(C10 H13 N5 O4) FORMUL 18 HOH *622(H2 O) SITE 1 AC1 1 HOH A1032 SITE 1 AC2 1 HOH B1003 SITE 1 AC3 7 HOH A1054 HOH A1112 HOH A1160 HOH A1217 SITE 2 AC3 7 HOH A1406 HOH A1495 HOH B1650 SITE 1 AC4 5 HOH A1012 HOH A1130 HOH A1173 HOH A1411 SITE 2 AC4 5 HOH A1454 SITE 1 AC5 3 HOH A1099 HOH A1313 HOH A1625 SITE 1 AC6 5 HOH A1031 HOH A1045 HOH A1150 HOH A1156 SITE 2 AC6 5 HOH A1196 SITE 1 AC7 3 HOH A1290 HOH A1329 HOH B1458 SITE 1 AC8 3 HOH B1070 HOH B1105 HOH B1190 SITE 1 AC9 9 HOH A1164 HOH B1041 HOH B1046 HOH B1245 SITE 2 AC9 9 HOH B1347 HOH B1367 HOH B1408 HOH B1500 SITE 3 AC9 9 HOH B1505 SITE 1 BC1 4 HOH B1155 HOH B1414 HOH B1461 HOH B1525 SITE 1 BC2 7 HOH B1000 HOH B1003 HOH B1026 HOH B1042 SITE 2 BC2 7 HOH B1087 HOH B1129 HOH B1179 SITE 1 BC3 3 HOH B1144 HOH B1374 HOH B1522 SITE 1 BC4 1 HOH B1177 SITE 1 BC5 4 HOH A1233 HOH A1353 HOH A1447 HOH A1456 SITE 1 BC6 2 HOH B1048 HOH B1435 CRYST1 35.139 41.830 64.810 86.55 81.16 89.64 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028459 -0.000181 -0.004425 0.00000 SCALE2 0.000000 0.023907 -0.001434 0.00000 SCALE3 0.000000 0.000000 0.015644 0.00000