data_3DSH # _entry.id 3DSH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DSH pdb_00003dsh 10.2210/pdb3dsh/pdb RCSB RCSB048431 ? ? WWPDB D_1000048431 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DSH _pdbx_database_status.recvd_initial_deposition_date 2008-07-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chen, W.' 1 'Lam, S.S.' 2 'Srinath, H.' 3 'Jiang, Z.' 4 'Correia, J.J.' 5 'Schiffer, C.' 6 'Fitzgerald, K.A.' 7 'Lin, K.' 8 'Royer Jr., W.E.' 9 # _citation.id primary _citation.title 'Insights into interferon regulatory factor activation from the crystal structure of dimeric IRF5.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 15 _citation.page_first 1213 _citation.page_last 1220 _citation.year 2008 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18836453 _citation.pdbx_database_id_DOI 10.1038/nsmb.1496 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, W.' 1 ? primary 'Lam, S.S.' 2 ? primary 'Srinath, H.' 3 ? primary 'Jiang, Z.' 4 ? primary 'Correia, J.J.' 5 ? primary 'Schiffer, C.A.' 6 ? primary 'Fitzgerald, K.A.' 7 ? primary 'Lin, K.' 8 ? primary 'Royer, W.E.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Interferon regulatory factor 5' 28595.842 1 ? S430D 'IRF-5 transactivation domain (UNP residues 232-477)' ? 2 water nat water 18.015 132 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name IRF-5 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQR FYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPP PFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFSGELSWSADDIRLQISNPDLKDRMVEQFKELHHIWQSQQRL QPVAQA ; _entity_poly.pdbx_seq_one_letter_code_can ;EQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQR FYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPP PFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFSGELSWSADDIRLQISNPDLKDRMVEQFKELHHIWQSQQRL QPVAQA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 GLN n 1 3 LEU n 1 4 LEU n 1 5 PRO n 1 6 ASP n 1 7 LEU n 1 8 LEU n 1 9 ILE n 1 10 SER n 1 11 PRO n 1 12 HIS n 1 13 MET n 1 14 LEU n 1 15 PRO n 1 16 LEU n 1 17 THR n 1 18 ASP n 1 19 LEU n 1 20 GLU n 1 21 ILE n 1 22 LYS n 1 23 PHE n 1 24 GLN n 1 25 TYR n 1 26 ARG n 1 27 GLY n 1 28 ARG n 1 29 PRO n 1 30 PRO n 1 31 ARG n 1 32 ALA n 1 33 LEU n 1 34 THR n 1 35 ILE n 1 36 SER n 1 37 ASN n 1 38 PRO n 1 39 HIS n 1 40 GLY n 1 41 CYS n 1 42 ARG n 1 43 LEU n 1 44 PHE n 1 45 TYR n 1 46 SER n 1 47 GLN n 1 48 LEU n 1 49 GLU n 1 50 ALA n 1 51 THR n 1 52 GLN n 1 53 GLU n 1 54 GLN n 1 55 VAL n 1 56 GLU n 1 57 LEU n 1 58 PHE n 1 59 GLY n 1 60 PRO n 1 61 ILE n 1 62 SER n 1 63 LEU n 1 64 GLU n 1 65 GLN n 1 66 VAL n 1 67 ARG n 1 68 PHE n 1 69 PRO n 1 70 SER n 1 71 PRO n 1 72 GLU n 1 73 ASP n 1 74 ILE n 1 75 PRO n 1 76 SER n 1 77 ASP n 1 78 LYS n 1 79 GLN n 1 80 ARG n 1 81 PHE n 1 82 TYR n 1 83 THR n 1 84 ASN n 1 85 GLN n 1 86 LEU n 1 87 LEU n 1 88 ASP n 1 89 VAL n 1 90 LEU n 1 91 ASP n 1 92 ARG n 1 93 GLY n 1 94 LEU n 1 95 ILE n 1 96 LEU n 1 97 GLN n 1 98 LEU n 1 99 GLN n 1 100 GLY n 1 101 GLN n 1 102 ASP n 1 103 LEU n 1 104 TYR n 1 105 ALA n 1 106 ILE n 1 107 ARG n 1 108 LEU n 1 109 CYS n 1 110 GLN n 1 111 CYS n 1 112 LYS n 1 113 VAL n 1 114 PHE n 1 115 TRP n 1 116 SER n 1 117 GLY n 1 118 PRO n 1 119 CYS n 1 120 ALA n 1 121 SER n 1 122 ALA n 1 123 HIS n 1 124 ASP n 1 125 SER n 1 126 CYS n 1 127 PRO n 1 128 ASN n 1 129 PRO n 1 130 ILE n 1 131 GLN n 1 132 ARG n 1 133 GLU n 1 134 VAL n 1 135 LYS n 1 136 THR n 1 137 LYS n 1 138 LEU n 1 139 PHE n 1 140 SER n 1 141 LEU n 1 142 GLU n 1 143 HIS n 1 144 PHE n 1 145 LEU n 1 146 ASN n 1 147 GLU n 1 148 LEU n 1 149 ILE n 1 150 LEU n 1 151 PHE n 1 152 GLN n 1 153 LYS n 1 154 GLY n 1 155 GLN n 1 156 THR n 1 157 ASN n 1 158 THR n 1 159 PRO n 1 160 PRO n 1 161 PRO n 1 162 PHE n 1 163 GLU n 1 164 ILE n 1 165 PHE n 1 166 PHE n 1 167 CYS n 1 168 PHE n 1 169 GLY n 1 170 GLU n 1 171 GLU n 1 172 TRP n 1 173 PRO n 1 174 ASP n 1 175 ARG n 1 176 LYS n 1 177 PRO n 1 178 ARG n 1 179 GLU n 1 180 LYS n 1 181 LYS n 1 182 LEU n 1 183 ILE n 1 184 THR n 1 185 VAL n 1 186 GLN n 1 187 VAL n 1 188 VAL n 1 189 PRO n 1 190 VAL n 1 191 ALA n 1 192 ALA n 1 193 ARG n 1 194 LEU n 1 195 LEU n 1 196 LEU n 1 197 GLU n 1 198 MET n 1 199 PHE n 1 200 SER n 1 201 GLY n 1 202 GLU n 1 203 LEU n 1 204 SER n 1 205 TRP n 1 206 SER n 1 207 ALA n 1 208 ASP n 1 209 ASP n 1 210 ILE n 1 211 ARG n 1 212 LEU n 1 213 GLN n 1 214 ILE n 1 215 SER n 1 216 ASN n 1 217 PRO n 1 218 ASP n 1 219 LEU n 1 220 LYS n 1 221 ASP n 1 222 ARG n 1 223 MET n 1 224 VAL n 1 225 GLU n 1 226 GLN n 1 227 PHE n 1 228 LYS n 1 229 GLU n 1 230 LEU n 1 231 HIS n 1 232 HIS n 1 233 ILE n 1 234 TRP n 1 235 GLN n 1 236 SER n 1 237 GLN n 1 238 GLN n 1 239 ARG n 1 240 LEU n 1 241 GLN n 1 242 PRO n 1 243 VAL n 1 244 ALA n 1 245 GLN n 1 246 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene IRF5 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HB101 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6p-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 222 222 GLU GLU A . n A 1 2 GLN 2 223 223 GLN GLN A . n A 1 3 LEU 3 224 224 LEU LEU A . n A 1 4 LEU 4 225 225 LEU LEU A . n A 1 5 PRO 5 226 226 PRO PRO A . n A 1 6 ASP 6 227 227 ASP ASP A . n A 1 7 LEU 7 228 228 LEU LEU A . n A 1 8 LEU 8 229 229 LEU LEU A . n A 1 9 ILE 9 230 230 ILE ILE A . n A 1 10 SER 10 231 231 SER SER A . n A 1 11 PRO 11 232 232 PRO PRO A . n A 1 12 HIS 12 233 233 HIS HIS A . n A 1 13 MET 13 234 234 MET MET A . n A 1 14 LEU 14 235 235 LEU LEU A . n A 1 15 PRO 15 236 236 PRO PRO A . n A 1 16 LEU 16 237 237 LEU LEU A . n A 1 17 THR 17 238 238 THR THR A . n A 1 18 ASP 18 239 239 ASP ASP A . n A 1 19 LEU 19 240 240 LEU LEU A . n A 1 20 GLU 20 241 241 GLU GLU A . n A 1 21 ILE 21 242 242 ILE ILE A . n A 1 22 LYS 22 243 243 LYS LYS A . n A 1 23 PHE 23 244 244 PHE PHE A . n A 1 24 GLN 24 245 245 GLN GLN A . n A 1 25 TYR 25 246 246 TYR TYR A . n A 1 26 ARG 26 247 247 ARG ARG A . n A 1 27 GLY 27 248 248 GLY GLY A . n A 1 28 ARG 28 249 249 ARG ARG A . n A 1 29 PRO 29 250 250 PRO PRO A . n A 1 30 PRO 30 251 251 PRO PRO A . n A 1 31 ARG 31 252 252 ARG ARG A . n A 1 32 ALA 32 253 253 ALA ALA A . n A 1 33 LEU 33 254 254 LEU LEU A . n A 1 34 THR 34 255 255 THR THR A . n A 1 35 ILE 35 256 256 ILE ILE A . n A 1 36 SER 36 257 257 SER SER A . n A 1 37 ASN 37 258 258 ASN ASN A . n A 1 38 PRO 38 259 259 PRO PRO A . n A 1 39 HIS 39 260 260 HIS HIS A . n A 1 40 GLY 40 261 261 GLY GLY A . n A 1 41 CYS 41 262 262 CYS CYS A . n A 1 42 ARG 42 263 263 ARG ARG A . n A 1 43 LEU 43 264 264 LEU LEU A . n A 1 44 PHE 44 265 265 PHE PHE A . n A 1 45 TYR 45 266 266 TYR TYR A . n A 1 46 SER 46 267 267 SER SER A . n A 1 47 GLN 47 268 268 GLN GLN A . n A 1 48 LEU 48 269 269 LEU LEU A . n A 1 49 GLU 49 270 270 GLU GLU A . n A 1 50 ALA 50 271 271 ALA ALA A . n A 1 51 THR 51 272 272 THR THR A . n A 1 52 GLN 52 273 273 GLN GLN A . n A 1 53 GLU 53 274 274 GLU GLU A . n A 1 54 GLN 54 275 275 GLN GLN A . n A 1 55 VAL 55 276 276 VAL VAL A . n A 1 56 GLU 56 277 277 GLU GLU A . n A 1 57 LEU 57 278 278 LEU LEU A . n A 1 58 PHE 58 279 279 PHE PHE A . n A 1 59 GLY 59 280 280 GLY GLY A . n A 1 60 PRO 60 281 281 PRO PRO A . n A 1 61 ILE 61 282 282 ILE ILE A . n A 1 62 SER 62 283 283 SER SER A . n A 1 63 LEU 63 284 284 LEU LEU A . n A 1 64 GLU 64 285 285 GLU GLU A . n A 1 65 GLN 65 286 286 GLN GLN A . n A 1 66 VAL 66 287 287 VAL VAL A . n A 1 67 ARG 67 288 288 ARG ARG A . n A 1 68 PHE 68 289 289 PHE PHE A . n A 1 69 PRO 69 290 290 PRO PRO A . n A 1 70 SER 70 291 291 SER SER A . n A 1 71 PRO 71 292 292 PRO PRO A . n A 1 72 GLU 72 293 293 GLU GLU A . n A 1 73 ASP 73 294 294 ASP ASP A . n A 1 74 ILE 74 295 295 ILE ILE A . n A 1 75 PRO 75 296 296 PRO PRO A . n A 1 76 SER 76 297 297 SER SER A . n A 1 77 ASP 77 298 298 ASP ASP A . n A 1 78 LYS 78 299 299 LYS LYS A . n A 1 79 GLN 79 300 300 GLN GLN A . n A 1 80 ARG 80 301 301 ARG ARG A . n A 1 81 PHE 81 302 302 PHE PHE A . n A 1 82 TYR 82 303 303 TYR TYR A . n A 1 83 THR 83 304 304 THR THR A . n A 1 84 ASN 84 305 305 ASN ASN A . n A 1 85 GLN 85 306 306 GLN GLN A . n A 1 86 LEU 86 307 307 LEU LEU A . n A 1 87 LEU 87 308 308 LEU LEU A . n A 1 88 ASP 88 309 309 ASP ASP A . n A 1 89 VAL 89 310 310 VAL VAL A . n A 1 90 LEU 90 311 311 LEU LEU A . n A 1 91 ASP 91 312 312 ASP ASP A . n A 1 92 ARG 92 313 313 ARG ARG A . n A 1 93 GLY 93 314 314 GLY GLY A . n A 1 94 LEU 94 315 315 LEU LEU A . n A 1 95 ILE 95 316 316 ILE ILE A . n A 1 96 LEU 96 317 317 LEU LEU A . n A 1 97 GLN 97 318 318 GLN GLN A . n A 1 98 LEU 98 319 319 LEU LEU A . n A 1 99 GLN 99 320 320 GLN GLN A . n A 1 100 GLY 100 321 321 GLY GLY A . n A 1 101 GLN 101 322 322 GLN GLN A . n A 1 102 ASP 102 323 323 ASP ASP A . n A 1 103 LEU 103 324 324 LEU LEU A . n A 1 104 TYR 104 325 325 TYR TYR A . n A 1 105 ALA 105 326 326 ALA ALA A . n A 1 106 ILE 106 327 327 ILE ILE A . n A 1 107 ARG 107 328 328 ARG ARG A . n A 1 108 LEU 108 329 329 LEU LEU A . n A 1 109 CYS 109 330 330 CYS CYS A . n A 1 110 GLN 110 331 331 GLN GLN A . n A 1 111 CYS 111 332 332 CYS CYS A . n A 1 112 LYS 112 333 333 LYS LYS A . n A 1 113 VAL 113 334 334 VAL VAL A . n A 1 114 PHE 114 335 335 PHE PHE A . n A 1 115 TRP 115 336 336 TRP TRP A . n A 1 116 SER 116 337 337 SER SER A . n A 1 117 GLY 117 338 338 GLY GLY A . n A 1 118 PRO 118 339 339 PRO PRO A . n A 1 119 CYS 119 340 340 CYS CYS A . n A 1 120 ALA 120 341 341 ALA ALA A . n A 1 121 SER 121 342 342 SER SER A . n A 1 122 ALA 122 343 343 ALA ALA A . n A 1 123 HIS 123 344 344 HIS HIS A . n A 1 124 ASP 124 345 345 ASP ASP A . n A 1 125 SER 125 346 346 SER SER A . n A 1 126 CYS 126 347 347 CYS CYS A . n A 1 127 PRO 127 348 348 PRO PRO A . n A 1 128 ASN 128 349 349 ASN ASN A . n A 1 129 PRO 129 350 350 PRO PRO A . n A 1 130 ILE 130 351 351 ILE ILE A . n A 1 131 GLN 131 352 352 GLN GLN A . n A 1 132 ARG 132 353 353 ARG ARG A . n A 1 133 GLU 133 354 354 GLU GLU A . n A 1 134 VAL 134 355 355 VAL VAL A . n A 1 135 LYS 135 356 356 LYS LYS A . n A 1 136 THR 136 357 357 THR THR A . n A 1 137 LYS 137 358 358 LYS LYS A . n A 1 138 LEU 138 359 359 LEU LEU A . n A 1 139 PHE 139 360 360 PHE PHE A . n A 1 140 SER 140 361 361 SER SER A . n A 1 141 LEU 141 362 362 LEU LEU A . n A 1 142 GLU 142 363 363 GLU GLU A . n A 1 143 HIS 143 364 364 HIS HIS A . n A 1 144 PHE 144 365 365 PHE PHE A . n A 1 145 LEU 145 366 366 LEU LEU A . n A 1 146 ASN 146 367 367 ASN ASN A . n A 1 147 GLU 147 368 368 GLU GLU A . n A 1 148 LEU 148 369 369 LEU LEU A . n A 1 149 ILE 149 370 370 ILE ILE A . n A 1 150 LEU 150 371 371 LEU LEU A . n A 1 151 PHE 151 372 372 PHE PHE A . n A 1 152 GLN 152 373 373 GLN GLN A . n A 1 153 LYS 153 374 374 LYS LYS A . n A 1 154 GLY 154 375 375 GLY GLY A . n A 1 155 GLN 155 376 376 GLN GLN A . n A 1 156 THR 156 377 377 THR THR A . n A 1 157 ASN 157 378 378 ASN ASN A . n A 1 158 THR 158 379 379 THR THR A . n A 1 159 PRO 159 380 380 PRO PRO A . n A 1 160 PRO 160 381 381 PRO PRO A . n A 1 161 PRO 161 382 382 PRO PRO A . n A 1 162 PHE 162 383 383 PHE PHE A . n A 1 163 GLU 163 384 384 GLU GLU A . n A 1 164 ILE 164 385 385 ILE ILE A . n A 1 165 PHE 165 386 386 PHE PHE A . n A 1 166 PHE 166 387 387 PHE PHE A . n A 1 167 CYS 167 388 388 CYS CYS A . n A 1 168 PHE 168 389 389 PHE PHE A . n A 1 169 GLY 169 390 390 GLY GLY A . n A 1 170 GLU 170 391 391 GLU GLU A . n A 1 171 GLU 171 392 392 GLU GLU A . n A 1 172 TRP 172 393 393 TRP TRP A . n A 1 173 PRO 173 394 394 PRO PRO A . n A 1 174 ASP 174 395 395 ASP ASP A . n A 1 175 ARG 175 396 396 ARG ARG A . n A 1 176 LYS 176 397 397 LYS LYS A . n A 1 177 PRO 177 398 398 PRO PRO A . n A 1 178 ARG 178 399 399 ARG ARG A . n A 1 179 GLU 179 400 400 GLU GLU A . n A 1 180 LYS 180 401 401 LYS LYS A . n A 1 181 LYS 181 402 402 LYS LYS A . n A 1 182 LEU 182 403 403 LEU LEU A . n A 1 183 ILE 183 404 404 ILE ILE A . n A 1 184 THR 184 405 405 THR THR A . n A 1 185 VAL 185 406 406 VAL VAL A . n A 1 186 GLN 186 407 407 GLN GLN A . n A 1 187 VAL 187 408 408 VAL VAL A . n A 1 188 VAL 188 409 409 VAL VAL A . n A 1 189 PRO 189 410 410 PRO PRO A . n A 1 190 VAL 190 411 411 VAL VAL A . n A 1 191 ALA 191 412 412 ALA ALA A . n A 1 192 ALA 192 413 413 ALA ALA A . n A 1 193 ARG 193 414 414 ARG ARG A . n A 1 194 LEU 194 415 415 LEU LEU A . n A 1 195 LEU 195 416 416 LEU LEU A . n A 1 196 LEU 196 417 417 LEU LEU A . n A 1 197 GLU 197 418 418 GLU GLU A . n A 1 198 MET 198 419 419 MET MET A . n A 1 199 PHE 199 420 420 PHE PHE A . n A 1 200 SER 200 421 421 SER SER A . n A 1 201 GLY 201 422 422 GLY GLY A . n A 1 202 GLU 202 423 423 GLU GLU A . n A 1 203 LEU 203 424 424 LEU LEU A . n A 1 204 SER 204 425 425 SER SER A . n A 1 205 TRP 205 426 426 TRP TRP A . n A 1 206 SER 206 427 427 SER SER A . n A 1 207 ALA 207 428 428 ALA ALA A . n A 1 208 ASP 208 429 429 ASP ASP A . n A 1 209 ASP 209 430 430 ASP ASP A . n A 1 210 ILE 210 431 431 ILE ILE A . n A 1 211 ARG 211 432 432 ARG ARG A . n A 1 212 LEU 212 433 433 LEU LEU A . n A 1 213 GLN 213 434 434 GLN GLN A . n A 1 214 ILE 214 435 435 ILE ILE A . n A 1 215 SER 215 436 436 SER SER A . n A 1 216 ASN 216 437 437 ASN ASN A . n A 1 217 PRO 217 438 438 PRO PRO A . n A 1 218 ASP 218 439 439 ASP ASP A . n A 1 219 LEU 219 440 440 LEU LEU A . n A 1 220 LYS 220 441 441 LYS LYS A . n A 1 221 ASP 221 442 442 ASP ASP A . n A 1 222 ARG 222 443 443 ARG ARG A . n A 1 223 MET 223 444 444 MET MET A . n A 1 224 VAL 224 445 445 VAL VAL A . n A 1 225 GLU 225 446 446 GLU GLU A . n A 1 226 GLN 226 447 447 GLN GLN A . n A 1 227 PHE 227 448 448 PHE PHE A . n A 1 228 LYS 228 449 449 LYS LYS A . n A 1 229 GLU 229 450 450 GLU GLU A . n A 1 230 LEU 230 451 451 LEU LEU A . n A 1 231 HIS 231 452 452 HIS HIS A . n A 1 232 HIS 232 453 453 HIS HIS A . n A 1 233 ILE 233 454 454 ILE ILE A . n A 1 234 TRP 234 455 455 TRP TRP A . n A 1 235 GLN 235 456 456 GLN GLN A . n A 1 236 SER 236 457 457 SER SER A . n A 1 237 GLN 237 458 ? ? ? A . n A 1 238 GLN 238 459 ? ? ? A . n A 1 239 ARG 239 460 ? ? ? A . n A 1 240 LEU 240 461 ? ? ? A . n A 1 241 GLN 241 462 ? ? ? A . n A 1 242 PRO 242 463 ? ? ? A . n A 1 243 VAL 243 464 ? ? ? A . n A 1 244 ALA 244 465 ? ? ? A . n A 1 245 GLN 245 466 ? ? ? A . n A 1 246 ALA 246 467 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 468 1 HOH HOH A . B 2 HOH 2 469 2 HOH HOH A . B 2 HOH 3 470 3 HOH HOH A . B 2 HOH 4 471 6 HOH HOH A . B 2 HOH 5 472 7 HOH HOH A . B 2 HOH 6 473 8 HOH HOH A . B 2 HOH 7 474 9 HOH HOH A . B 2 HOH 8 475 10 HOH HOH A . B 2 HOH 9 476 11 HOH HOH A . B 2 HOH 10 477 12 HOH HOH A . B 2 HOH 11 478 13 HOH HOH A . B 2 HOH 12 479 14 HOH HOH A . B 2 HOH 13 480 15 HOH HOH A . B 2 HOH 14 481 16 HOH HOH A . B 2 HOH 15 482 19 HOH HOH A . B 2 HOH 16 483 20 HOH HOH A . B 2 HOH 17 484 21 HOH HOH A . B 2 HOH 18 485 22 HOH HOH A . B 2 HOH 19 486 24 HOH HOH A . B 2 HOH 20 487 25 HOH HOH A . B 2 HOH 21 488 26 HOH HOH A . B 2 HOH 22 489 27 HOH HOH A . B 2 HOH 23 490 28 HOH HOH A . B 2 HOH 24 491 29 HOH HOH A . B 2 HOH 25 492 30 HOH HOH A . B 2 HOH 26 493 31 HOH HOH A . B 2 HOH 27 494 32 HOH HOH A . B 2 HOH 28 495 33 HOH HOH A . B 2 HOH 29 496 34 HOH HOH A . B 2 HOH 30 497 35 HOH HOH A . B 2 HOH 31 498 36 HOH HOH A . B 2 HOH 32 499 37 HOH HOH A . B 2 HOH 33 500 38 HOH HOH A . B 2 HOH 34 501 39 HOH HOH A . B 2 HOH 35 502 40 HOH HOH A . B 2 HOH 36 503 41 HOH HOH A . B 2 HOH 37 504 42 HOH HOH A . B 2 HOH 38 505 43 HOH HOH A . B 2 HOH 39 506 44 HOH HOH A . B 2 HOH 40 507 45 HOH HOH A . B 2 HOH 41 508 46 HOH HOH A . B 2 HOH 42 509 47 HOH HOH A . B 2 HOH 43 510 48 HOH HOH A . B 2 HOH 44 511 49 HOH HOH A . B 2 HOH 45 512 50 HOH HOH A . B 2 HOH 46 513 51 HOH HOH A . B 2 HOH 47 514 52 HOH HOH A . B 2 HOH 48 515 53 HOH HOH A . B 2 HOH 49 516 54 HOH HOH A . B 2 HOH 50 517 55 HOH HOH A . B 2 HOH 51 518 57 HOH HOH A . B 2 HOH 52 519 58 HOH HOH A . B 2 HOH 53 520 60 HOH HOH A . B 2 HOH 54 521 61 HOH HOH A . B 2 HOH 55 522 62 HOH HOH A . B 2 HOH 56 523 63 HOH HOH A . B 2 HOH 57 524 64 HOH HOH A . B 2 HOH 58 525 66 HOH HOH A . B 2 HOH 59 526 68 HOH HOH A . B 2 HOH 60 527 69 HOH HOH A . B 2 HOH 61 528 72 HOH HOH A . B 2 HOH 62 529 73 HOH HOH A . B 2 HOH 63 530 74 HOH HOH A . B 2 HOH 64 531 75 HOH HOH A . B 2 HOH 65 532 76 HOH HOH A . B 2 HOH 66 533 77 HOH HOH A . B 2 HOH 67 534 78 HOH HOH A . B 2 HOH 68 535 80 HOH HOH A . B 2 HOH 69 536 81 HOH HOH A . B 2 HOH 70 537 83 HOH HOH A . B 2 HOH 71 538 84 HOH HOH A . B 2 HOH 72 539 85 HOH HOH A . B 2 HOH 73 540 88 HOH HOH A . B 2 HOH 74 541 89 HOH HOH A . B 2 HOH 75 542 91 HOH HOH A . B 2 HOH 76 543 94 HOH HOH A . B 2 HOH 77 544 95 HOH HOH A . B 2 HOH 78 545 96 HOH HOH A . B 2 HOH 79 546 97 HOH HOH A . B 2 HOH 80 547 98 HOH HOH A . B 2 HOH 81 548 99 HOH HOH A . B 2 HOH 82 549 101 HOH HOH A . B 2 HOH 83 550 106 HOH HOH A . B 2 HOH 84 551 107 HOH HOH A . B 2 HOH 85 552 109 HOH HOH A . B 2 HOH 86 553 112 HOH HOH A . B 2 HOH 87 554 113 HOH HOH A . B 2 HOH 88 555 114 HOH HOH A . B 2 HOH 89 556 120 HOH HOH A . B 2 HOH 90 557 123 HOH HOH A . B 2 HOH 91 558 125 HOH HOH A . B 2 HOH 92 559 127 HOH HOH A . B 2 HOH 93 560 129 HOH HOH A . B 2 HOH 94 561 131 HOH HOH A . B 2 HOH 95 562 133 HOH HOH A . B 2 HOH 96 563 134 HOH HOH A . B 2 HOH 97 564 142 HOH HOH A . B 2 HOH 98 565 144 HOH HOH A . B 2 HOH 99 566 145 HOH HOH A . B 2 HOH 100 567 146 HOH HOH A . B 2 HOH 101 568 147 HOH HOH A . B 2 HOH 102 569 148 HOH HOH A . B 2 HOH 103 570 149 HOH HOH A . B 2 HOH 104 571 150 HOH HOH A . B 2 HOH 105 572 152 HOH HOH A . B 2 HOH 106 573 156 HOH HOH A . B 2 HOH 107 574 157 HOH HOH A . B 2 HOH 108 575 159 HOH HOH A . B 2 HOH 109 576 160 HOH HOH A . B 2 HOH 110 577 161 HOH HOH A . B 2 HOH 111 578 165 HOH HOH A . B 2 HOH 112 579 166 HOH HOH A . B 2 HOH 113 580 167 HOH HOH A . B 2 HOH 114 581 170 HOH HOH A . B 2 HOH 115 582 172 HOH HOH A . B 2 HOH 116 583 174 HOH HOH A . B 2 HOH 117 584 178 HOH HOH A . B 2 HOH 118 585 179 HOH HOH A . B 2 HOH 119 586 183 HOH HOH A . B 2 HOH 120 587 184 HOH HOH A . B 2 HOH 121 588 185 HOH HOH A . B 2 HOH 122 589 187 HOH HOH A . B 2 HOH 123 590 190 HOH HOH A . B 2 HOH 124 591 194 HOH HOH A . B 2 HOH 125 592 195 HOH HOH A . B 2 HOH 126 593 197 HOH HOH A . B 2 HOH 127 594 199 HOH HOH A . B 2 HOH 128 595 201 HOH HOH A . B 2 HOH 129 596 206 HOH HOH A . B 2 HOH 130 597 209 HOH HOH A . B 2 HOH 131 598 215 HOH HOH A . B 2 HOH 132 599 222 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0037 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SOLVE phasing . ? 5 # _cell.entry_id 3DSH _cell.length_a 66.162 _cell.length_b 66.162 _cell.length_c 156.254 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DSH _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3DSH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.45 _exptl_crystal.density_percent_sol 64.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '0.5-2.0% PEG 6000, 100mM imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 1,2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'ADSC QUANTUM 315' 2007-01-01 ? 2 'IMAGE PLATE' 'RIGAKU RAXIS IV' 2007-01-01 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.1 1.0 2 1.54178 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'NSLS BEAMLINE X29A' NSLS X29A ? 1.1 2 'ROTATING ANODE' 'RIGAKU RUH3R' ? ? ? 1.54178 # _reflns.entry_id 3DSH _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 100.0 _reflns.number_all 26875 _reflns.number_obs 26875 _reflns.percent_possible_obs 96.9 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 78.8 _reflns_shell.Rmerge_I_obs 0.0229 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 7.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 3DSH _refine.ls_number_reflns_obs 25440 _refine.ls_number_reflns_all 25440 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.46 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 96.83 _refine.ls_R_factor_obs 0.20632 _refine.ls_R_factor_all 0.206 _refine.ls_R_factor_R_work 0.20448 _refine.ls_R_factor_R_free 0.24241 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1342 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.938 _refine.B_iso_mean 45.605 _refine.aniso_B[1][1] -0.66 _refine.aniso_B[2][2] -0.66 _refine.aniso_B[3][3] 0.98 _refine.aniso_B[1][2] -0.33 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.146 _refine.pdbx_overall_ESU_R_Free 0.142 _refine.overall_SU_ML 0.104 _refine.overall_SU_B 8.285 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1935 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 132 _refine_hist.number_atoms_total 2067 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 30.46 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 1988 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.320 1.978 ? 2699 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.815 5.000 ? 235 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.670 24.242 ? 99 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.000 15.000 ? 350 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 27.706 15.000 ? 14 'X-RAY DIFFRACTION' ? r_chiral_restr 0.122 0.200 ? 292 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.020 ? 1531 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.223 0.300 ? 806 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.329 0.500 ? 1348 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.201 0.500 ? 197 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.204 0.300 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.224 0.500 ? 40 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.192 2.000 ? 1217 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.242 3.000 ? 1944 'X-RAY DIFFRACTION' ? r_scbond_it 2.537 2.000 ? 855 'X-RAY DIFFRACTION' ? r_scangle_it 3.787 3.000 ? 755 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.998 _refine_ls_shell.d_res_low 2.050 _refine_ls_shell.number_reflns_R_work 1468 _refine_ls_shell.R_factor_R_work 0.207 _refine_ls_shell.percent_reflns_obs 77.14 _refine_ls_shell.R_factor_R_free 0.270 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 67 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3DSH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3DSH _struct.title 'Crystal structure of dimeric interferon regulatory factor 5 (IRF-5) transactivation domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DSH _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text 'Phosphoactivation induced dimerization, DNA-binding, Nucleus, Transcription, Transcription regulation, DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IRF5_HUMAN _struct_ref.pdbx_db_accession Q13568 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQR FYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPP PFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRL QPVAQA ; _struct_ref.pdbx_align_begin 232 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DSH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 246 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13568 _struct_ref_seq.db_align_beg 232 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 477 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 222 _struct_ref_seq.pdbx_auth_seq_align_end 467 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3DSH _struct_ref_seq_dif.mon_id ASP _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 209 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q13568 _struct_ref_seq_dif.db_mon_id SER _struct_ref_seq_dif.pdbx_seq_db_seq_num 440 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 430 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5890 ? 1 MORE -21 ? 1 'SSA (A^2)' 23970 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 156.2540000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 3 ? ILE A 9 ? LEU A 224 ILE A 230 1 ? 7 HELX_P HELX_P2 2 THR A 51 ? GLU A 53 ? THR A 272 GLU A 274 5 ? 3 HELX_P HELX_P3 3 GLN A 54 ? GLY A 59 ? GLN A 275 GLY A 280 1 ? 6 HELX_P HELX_P4 4 SER A 76 ? ASP A 88 ? SER A 297 ASP A 309 1 ? 13 HELX_P HELX_P5 5 LEU A 141 ? LYS A 153 ? LEU A 362 LYS A 374 1 ? 13 HELX_P HELX_P6 6 PRO A 177 ? LYS A 181 ? PRO A 398 LYS A 402 5 ? 5 HELX_P HELX_P7 7 VAL A 190 ? GLY A 201 ? VAL A 411 GLY A 422 1 ? 12 HELX_P HELX_P8 8 ASP A 218 ? GLN A 235 ? ASP A 439 GLN A 456 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 172 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 393 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 173 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 394 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -9.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 31 ? ILE A 35 ? ARG A 252 ILE A 256 A 2 LEU A 19 ? TYR A 25 ? LEU A 240 TYR A 246 A 3 ILE A 183 ? PRO A 189 ? ILE A 404 PRO A 410 A 4 ILE A 164 ? PHE A 168 ? ILE A 385 PHE A 389 A 5 VAL A 113 ? SER A 116 ? VAL A 334 SER A 337 B 1 GLU A 64 ? ARG A 67 ? GLU A 285 ARG A 288 B 2 CYS A 41 ? PHE A 44 ? CYS A 262 PHE A 265 B 3 LEU A 94 ? GLN A 99 ? LEU A 315 GLN A 320 B 4 ASP A 102 ? ARG A 107 ? ASP A 323 ARG A 328 B 5 THR A 136 ? SER A 140 ? THR A 357 SER A 361 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 31 ? O ARG A 252 N PHE A 23 ? N PHE A 244 A 2 3 N LYS A 22 ? N LYS A 243 O GLN A 186 ? O GLN A 407 A 3 4 O VAL A 187 ? O VAL A 408 N ILE A 164 ? N ILE A 385 A 4 5 O PHE A 165 ? O PHE A 386 N SER A 116 ? N SER A 337 B 1 2 O VAL A 66 ? O VAL A 287 N ARG A 42 ? N ARG A 263 B 2 3 N LEU A 43 ? N LEU A 264 O LEU A 94 ? O LEU A 315 B 3 4 N GLN A 99 ? N GLN A 320 O ASP A 102 ? O ASP A 323 B 4 5 N LEU A 103 ? N LEU A 324 O LEU A 138 ? O LEU A 359 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 11.4390 _pdbx_refine_tls.origin_y 35.8250 _pdbx_refine_tls.origin_z 72.6010 _pdbx_refine_tls.T[1][1] -0.1297 _pdbx_refine_tls.T[2][2] 0.1016 _pdbx_refine_tls.T[3][3] -0.1536 _pdbx_refine_tls.T[1][2] 0.0525 _pdbx_refine_tls.T[1][3] 0.0140 _pdbx_refine_tls.T[2][3] -0.0496 _pdbx_refine_tls.L[1][1] 0.3686 _pdbx_refine_tls.L[2][2] 0.4578 _pdbx_refine_tls.L[3][3] 3.3275 _pdbx_refine_tls.L[1][2] -0.1040 _pdbx_refine_tls.L[1][3] 0.0891 _pdbx_refine_tls.L[2][3] 0.0792 _pdbx_refine_tls.S[1][1] -0.1189 _pdbx_refine_tls.S[2][2] 0.0332 _pdbx_refine_tls.S[3][3] 0.0858 _pdbx_refine_tls.S[1][2] 0.2197 _pdbx_refine_tls.S[1][3] -0.0571 _pdbx_refine_tls.S[2][3] 0.0673 _pdbx_refine_tls.S[2][1] 0.1509 _pdbx_refine_tls.S[3][1] -0.2464 _pdbx_refine_tls.S[3][2] -0.2430 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 222 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 457 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 458 ? A GLN 237 2 1 Y 1 A GLN 459 ? A GLN 238 3 1 Y 1 A ARG 460 ? A ARG 239 4 1 Y 1 A LEU 461 ? A LEU 240 5 1 Y 1 A GLN 462 ? A GLN 241 6 1 Y 1 A PRO 463 ? A PRO 242 7 1 Y 1 A VAL 464 ? A VAL 243 8 1 Y 1 A ALA 465 ? A ALA 244 9 1 Y 1 A GLN 466 ? A GLN 245 10 1 Y 1 A ALA 467 ? A ALA 246 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3DSH _atom_sites.fract_transf_matrix[1][1] 0.015114 _atom_sites.fract_transf_matrix[1][2] 0.008726 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017453 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006400 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_