HEADER HYDROLASE 13-JUL-08 3DSL TITLE THE THREE-DIMENSIONAL STRUCTURE OF BOTHROPASIN, THE MAIN HEMORRHAGIC TITLE 2 FACTOR FROM BOTHROPS JARARACA VENOM. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC METALLOPROTEINASE-DISINTEGRIN BOTHROPASIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DISINTEGRIN BOTHROPASIN; COMPND 5 EC: 3.4.24.49 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOTHROPS JARARACA; SOURCE 3 ORGANISM_COMMON: JARARACA; SOURCE 4 ORGANISM_TAXID: 8724 KEYWDS SNAKE VENOM, METALLOPROTEASE, DISINTEGRIN, BLOOD COAGULATION, CELL KEYWDS 2 ADHESION, GLYCOPROTEIN, HYDROLASE, METAL-BINDING, PROTEASE, KEYWDS 3 SECRETED, TOXIN, ZYMOGEN EXPDTA X-RAY DIFFRACTION AUTHOR J.R.C.MUNIZ,A.AMBROSIO,H.S.SELISTRE-DE-ARAUJO,G.OLIVA,R.C.GARRATT, AUTHOR 2 D.H.F.SOUZA REVDAT 5 29-JUL-20 3DSL 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE REVDAT 4 13-JUL-11 3DSL 1 VERSN REVDAT 3 24-FEB-09 3DSL 1 VERSN REVDAT 2 25-NOV-08 3DSL 1 JRNL REVDAT 1 21-OCT-08 3DSL 0 JRNL AUTH J.R.MUNIZ,A.L.AMBROSIO,H.S.SELISTRE-DE-ARAUJO,M.R.COMINETTI, JRNL AUTH 2 A.M.MOURA-DA-SILVA,G.OLIVA,R.C.GARRATT,D.H.SOUZA JRNL TITL THE THREE-DIMENSIONAL STRUCTURE OF BOTHROPASIN, THE MAIN JRNL TITL 2 HEMORRHAGIC FACTOR FROM BOTHROPS JARARACA VENOM: INSIGHTS JRNL TITL 3 FOR A NEW CLASSIFICATION OF SNAKE VENOM METALLOPROTEASE JRNL TITL 4 SUBGROUPS. JRNL REF TOXICON V. 52 807 2008 JRNL REFN ISSN 0041-0101 JRNL PMID 18831982 JRNL DOI 10.1016/J.TOXICON.2008.08.021 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 21078 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.770 REMARK 3 FREE R VALUE TEST SET COUNT : 1637 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.7676 - 2.7000 0.01 0 121 0.3128 0.3918 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 55.71 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6668 REMARK 3 ANGLE : 1.163 8983 REMARK 3 CHIRALITY : 0.078 927 REMARK 3 PLANARITY : 0.009 1203 REMARK 3 DIHEDRAL : 20.151 2423 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3DSL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048435. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : D03B-MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.427000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27681 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 58.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : 0.08600 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.00 REMARK 200 R MERGE FOR SHELL (I) : 0.66100 REMARK 200 R SYM FOR SHELL (I) : 0.66100 REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD + MR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40 MM AMMONIUM ACETATE, 100 MM SODIUM REMARK 280 ACETATE BUFFER, 29% PEG 4000 , PH 4.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.87850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.61850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.13550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.61850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.87850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.13550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 419 REMARK 465 ALA A 420 REMARK 465 TYR A 421 REMARK 465 GLN B 3 REMARK 465 ASP B 416 REMARK 465 VAL B 417 REMARK 465 ALA B 418 REMARK 465 THR B 419 REMARK 465 ALA B 420 REMARK 465 TYR B 421 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB CYS B 239 SG CYS B 262 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY B 355 C LYS B 356 N -0.284 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 177 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 4 151.70 -41.85 REMARK 500 ASP A 28 84.97 -53.85 REMARK 500 ASN A 64 -73.54 -79.78 REMARK 500 CYS A 120 -15.21 83.47 REMARK 500 ASP A 158 -130.32 48.02 REMARK 500 PHE A 159 31.55 -94.57 REMARK 500 ASP A 164 52.01 -97.98 REMARK 500 SER A 178 -168.55 -106.18 REMARK 500 ASN A 197 94.93 31.98 REMARK 500 CYS A 229 53.09 -152.89 REMARK 500 ALA A 242 -39.93 -36.17 REMARK 500 SER A 249 -87.13 -9.78 REMARK 500 GLU A 260 -151.31 -83.71 REMARK 500 GLN A 261 -69.75 -16.03 REMARK 500 CYS A 262 -1.15 -154.50 REMARK 500 MET A 275 -79.25 -76.60 REMARK 500 SER A 276 -159.23 -125.34 REMARK 500 PRO A 292 151.60 -35.20 REMARK 500 ALA A 293 163.18 -49.56 REMARK 500 TYR A 311 116.17 -168.69 REMARK 500 ASN A 312 47.58 38.08 REMARK 500 TYR A 346 -33.03 -34.03 REMARK 500 CYS A 350 -65.68 -124.39 REMARK 500 ASN A 354 30.35 -165.28 REMARK 500 PRO A 359 -177.03 -64.16 REMARK 500 PRO A 362 -19.40 -49.75 REMARK 500 ASP A 364 9.46 -65.90 REMARK 500 ARG A 369 136.55 -34.15 REMARK 500 PRO A 377 137.40 -37.46 REMARK 500 GLN A 379 21.02 -144.96 REMARK 500 CYS A 383 72.23 -109.99 REMARK 500 ASP A 391 91.47 176.46 REMARK 500 ALA A 404 -152.13 -167.64 REMARK 500 ASN A 411 77.23 38.69 REMARK 500 VAL A 417 -78.58 -60.57 REMARK 500 ASN B 26 17.71 52.21 REMARK 500 ASP B 28 87.27 -63.96 REMARK 500 GLU B 45 -71.24 -52.79 REMARK 500 ASN B 64 -111.29 -101.16 REMARK 500 ASP B 88 -76.47 -131.45 REMARK 500 HIS B 95 145.59 -179.28 REMARK 500 ASN B 107 -113.16 -57.82 REMARK 500 PRO B 109 92.68 -33.76 REMARK 500 CYS B 120 -12.21 98.03 REMARK 500 ASP B 131 52.58 -68.50 REMARK 500 ASN B 150 -25.08 -37.98 REMARK 500 ASP B 156 102.62 -55.70 REMARK 500 THR B 157 -98.27 -36.36 REMARK 500 PHE B 159 18.93 -149.62 REMARK 500 CYS B 162 51.06 -156.77 REMARK 500 REMARK 500 THIS ENTRY HAS 84 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 1 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 12 OE1 REMARK 620 2 ASP A 96 OD1 102.9 REMARK 620 3 ASP A 96 OD2 100.7 47.8 REMARK 620 4 CYS A 200 O 164.6 85.0 94.5 REMARK 620 5 ASN A 203 OD1 94.5 147.8 153.8 72.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 2 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 215 O REMARK 620 2 ASN A 218 OD1 67.7 REMARK 620 3 LEU A 220 O 150.4 90.6 REMARK 620 4 GLU A 222 OE1 72.7 73.0 82.1 REMARK 620 5 GLU A 225 OE1 117.7 162.4 77.7 92.2 REMARK 620 6 GLU A 225 OE2 70.9 138.5 127.1 93.8 49.7 REMARK 620 7 ASP A 228 OD2 84.9 79.5 111.8 149.5 116.8 98.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 145 NE2 REMARK 620 2 HIS A 149 NE2 101.7 REMARK 620 3 TRP A 505 O 116.2 112.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 279 OD2 REMARK 620 2 PRO A 280 O 111.1 REMARK 620 3 GLU A 282 OE1 172.7 71.9 REMARK 620 4 GLU A 282 OE2 140.2 82.1 45.8 REMARK 620 5 ASP A 294 OD2 109.8 133.6 70.3 52.1 REMARK 620 6 VAL A 295 O 94.8 78.8 79.1 124.9 118.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 507 OXT REMARK 620 2 HIS B 145 NE2 99.3 REMARK 620 3 HIS B 149 NE2 106.8 104.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 422 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 12 OE1 REMARK 620 2 ASP B 96 OD1 99.2 REMARK 620 3 ASP B 96 OD2 92.9 47.0 REMARK 620 4 CYS B 200 O 147.0 60.2 54.1 REMARK 620 5 ASN B 203 OD1 79.0 169.3 143.3 126.0 REMARK 620 6 ASN B 203 ND2 122.5 128.4 141.9 89.5 48.0 REMARK 620 7 HOH B 430 O 93.4 92.8 139.8 111.9 76.8 58.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 423 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL B 215 O REMARK 620 2 ASN B 218 OD1 66.9 REMARK 620 3 ASN B 218 ND2 107.3 47.4 REMARK 620 4 LEU B 220 O 164.8 110.0 77.6 REMARK 620 5 GLU B 225 OE1 102.5 156.0 150.1 74.4 REMARK 620 6 GLU B 225 OE2 59.4 113.5 160.6 111.8 46.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 424 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 279 OD2 REMARK 620 2 GLU B 282 OE1 104.0 REMARK 620 3 ASP B 294 OD1 61.9 46.2 REMARK 620 4 VAL B 295 O 67.4 105.5 72.6 REMARK 620 N 1 2 3 DBREF 3DSL A 3 421 UNP O93523 VMBOP_BOTJA 192 610 DBREF 3DSL B 3 421 UNP O93523 VMBOP_BOTJA 192 610 SEQRES 1 A 419 GLN LYS TYR ASN PRO PHE ARG TYR VAL GLU LEU PHE ILE SEQRES 2 A 419 VAL VAL ASP GLN GLY MET VAL THR LYS ASN ASN GLY ASP SEQRES 3 A 419 LEU ASP LYS ILE LYS ALA ARG MET TYR GLU LEU ALA ASN SEQRES 4 A 419 ILE VAL ASN GLU ILE LEU ARG TYR LEU TYR MET HIS ALA SEQRES 5 A 419 ALA LEU VAL GLY LEU GLU ILE TRP SER ASN GLY ASP LYS SEQRES 6 A 419 ILE THR VAL LYS PRO ASP VAL ASP TYR THR LEU ASN SER SEQRES 7 A 419 PHE ALA GLU TRP ARG LYS THR ASP LEU LEU THR ARG LYS SEQRES 8 A 419 LYS HIS ASP ASN ALA GLN LEU LEU THR ALA ILE ASP PHE SEQRES 9 A 419 ASN GLY PRO THR ILE GLY TYR ALA TYR ILE GLY SER MET SEQRES 10 A 419 CYS HIS PRO LYS ARG SER VAL ALA ILE VAL GLU ASP TYR SEQRES 11 A 419 SER PRO ILE ASN LEU VAL VAL ALA VAL ILE MET ALA HIS SEQRES 12 A 419 GLU MET GLY HIS ASN LEU GLY ILE HIS HIS ASP THR ASP SEQRES 13 A 419 PHE CYS SER CYS GLY ASP TYR PRO CYS ILE MET GLY PRO SEQRES 14 A 419 THR ILE SER ASN GLU PRO SER LYS PHE PHE SER ASN CYS SEQRES 15 A 419 SER TYR ILE GLN CYS TRP ASP PHE ILE MET LYS GLU ASN SEQRES 16 A 419 PRO GLN CYS ILE LEU ASN GLU PRO LEU GLY THR ASP ILE SEQRES 17 A 419 VAL SER PRO PRO VAL CYS GLY ASN GLU LEU LEU GLU VAL SEQRES 18 A 419 GLY GLU GLU CYS ASP CYS GLY THR PRO GLU ASN CYS GLN SEQRES 19 A 419 ASN GLU CYS CYS ASP ALA ALA THR CYS LYS LEU LYS SER SEQRES 20 A 419 GLY SER GLN CYS GLY HIS GLY ASP CYS CYS GLU GLN CYS SEQRES 21 A 419 LYS PHE SER LYS SER GLY THR GLU CYS ARG ALA SER MET SEQRES 22 A 419 SER GLU CYS ASP PRO ALA GLU HIS CYS THR GLY GLN SER SEQRES 23 A 419 SER GLU CYS PRO ALA ASP VAL PHE HIS LYS ASN GLY GLN SEQRES 24 A 419 PRO CYS LEU ASP ASN TYR GLY TYR CYS TYR ASN GLY ASN SEQRES 25 A 419 CYS PRO ILE MET TYR HIS GLN CYS TYR ALA LEU PHE GLY SEQRES 26 A 419 ALA ASP VAL TYR GLU ALA GLU ASP SER CYS PHE LYS ASP SEQRES 27 A 419 ASN GLN LYS GLY ASN TYR TYR GLY TYR CYS ARG LYS GLU SEQRES 28 A 419 ASN GLY LYS LYS ILE PRO CYS ALA PRO GLU ASP VAL LYS SEQRES 29 A 419 CYS GLY ARG LEU TYR CYS LYS ASP ASN SER PRO GLY GLN SEQRES 30 A 419 ASN ASN PRO CYS LYS MET PHE TYR SER ASN ASP ASP GLU SEQRES 31 A 419 HIS LYS GLY MET VAL LEU PRO GLY THR LYS CYS ALA ASP SEQRES 32 A 419 GLY LYS VAL CYS SER ASN GLY HIS CYS VAL ASP VAL ALA SEQRES 33 A 419 THR ALA TYR SEQRES 1 B 419 GLN LYS TYR ASN PRO PHE ARG TYR VAL GLU LEU PHE ILE SEQRES 2 B 419 VAL VAL ASP GLN GLY MET VAL THR LYS ASN ASN GLY ASP SEQRES 3 B 419 LEU ASP LYS ILE LYS ALA ARG MET TYR GLU LEU ALA ASN SEQRES 4 B 419 ILE VAL ASN GLU ILE LEU ARG TYR LEU TYR MET HIS ALA SEQRES 5 B 419 ALA LEU VAL GLY LEU GLU ILE TRP SER ASN GLY ASP LYS SEQRES 6 B 419 ILE THR VAL LYS PRO ASP VAL ASP TYR THR LEU ASN SER SEQRES 7 B 419 PHE ALA GLU TRP ARG LYS THR ASP LEU LEU THR ARG LYS SEQRES 8 B 419 LYS HIS ASP ASN ALA GLN LEU LEU THR ALA ILE ASP PHE SEQRES 9 B 419 ASN GLY PRO THR ILE GLY TYR ALA TYR ILE GLY SER MET SEQRES 10 B 419 CYS HIS PRO LYS ARG SER VAL ALA ILE VAL GLU ASP TYR SEQRES 11 B 419 SER PRO ILE ASN LEU VAL VAL ALA VAL ILE MET ALA HIS SEQRES 12 B 419 GLU MET GLY HIS ASN LEU GLY ILE HIS HIS ASP THR ASP SEQRES 13 B 419 PHE CYS SER CYS GLY ASP TYR PRO CYS ILE MET GLY PRO SEQRES 14 B 419 THR ILE SER ASN GLU PRO SER LYS PHE PHE SER ASN CYS SEQRES 15 B 419 SER TYR ILE GLN CYS TRP ASP PHE ILE MET LYS GLU ASN SEQRES 16 B 419 PRO GLN CYS ILE LEU ASN GLU PRO LEU GLY THR ASP ILE SEQRES 17 B 419 VAL SER PRO PRO VAL CYS GLY ASN GLU LEU LEU GLU VAL SEQRES 18 B 419 GLY GLU GLU CYS ASP CYS GLY THR PRO GLU ASN CYS GLN SEQRES 19 B 419 ASN GLU CYS CYS ASP ALA ALA THR CYS LYS LEU LYS SER SEQRES 20 B 419 GLY SER GLN CYS GLY HIS GLY ASP CYS CYS GLU GLN CYS SEQRES 21 B 419 LYS PHE SER LYS SER GLY THR GLU CYS ARG ALA SER MET SEQRES 22 B 419 SER GLU CYS ASP PRO ALA GLU HIS CYS THR GLY GLN SER SEQRES 23 B 419 SER GLU CYS PRO ALA ASP VAL PHE HIS LYS ASN GLY GLN SEQRES 24 B 419 PRO CYS LEU ASP ASN TYR GLY TYR CYS TYR ASN GLY ASN SEQRES 25 B 419 CYS PRO ILE MET TYR HIS GLN CYS TYR ALA LEU PHE GLY SEQRES 26 B 419 ALA ASP VAL TYR GLU ALA GLU ASP SER CYS PHE LYS ASP SEQRES 27 B 419 ASN GLN LYS GLY ASN TYR TYR GLY TYR CYS ARG LYS GLU SEQRES 28 B 419 ASN GLY LYS LYS ILE PRO CYS ALA PRO GLU ASP VAL LYS SEQRES 29 B 419 CYS GLY ARG LEU TYR CYS LYS ASP ASN SER PRO GLY GLN SEQRES 30 B 419 ASN ASN PRO CYS LYS MET PHE TYR SER ASN ASP ASP GLU SEQRES 31 B 419 HIS LYS GLY MET VAL LEU PRO GLY THR LYS CYS ALA ASP SEQRES 32 B 419 GLY LYS VAL CYS SER ASN GLY HIS CYS VAL ASP VAL ALA SEQRES 33 B 419 THR ALA TYR MODRES 3DSL ASN A 183 ASN GLYCOSYLATION SITE HET NAG A 501 14 HET CA A 1 1 HET CA A 2 1 HET CA A 502 1 HET ZN A 503 1 HET FLE A 504 15 HET TRP A 505 15 HET FLE A 506 15 HET TRP A 507 15 HET CA B 422 1 HET CA B 423 1 HET CA B 424 1 HET ZN B 1 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM ZN ZINC ION HETNAM FLE FUROYL-LEUCINE HETNAM TRP TRYPTOPHAN FORMUL 3 NAG C8 H15 N O6 FORMUL 4 CA 6(CA 2+) FORMUL 7 ZN 2(ZN 2+) FORMUL 8 FLE 2(C11 H15 N O4) FORMUL 9 TRP 2(C11 H12 N2 O2) FORMUL 16 HOH *184(H2 O) HELIX 1 1 ASP A 18 ASN A 25 1 8 HELIX 2 2 ASP A 28 ARG A 48 1 21 HELIX 3 3 ASP A 73 ASP A 88 1 16 HELIX 4 4 ILE A 135 LEU A 151 1 17 HELIX 5 5 SER A 182 ASN A 197 1 16 HELIX 6 6 PRO A 198 LEU A 202 5 5 HELIX 7 7 LEU A 206 ILE A 210 5 5 HELIX 8 8 ILE A 317 GLY A 327 1 11 HELIX 9 9 GLU A 334 LYS A 343 5 10 HELIX 10 10 GLU A 363 GLY A 368 5 6 HELIX 11 11 ASP B 18 ASN B 25 1 8 HELIX 12 12 ASP B 28 ARG B 48 1 21 HELIX 13 13 ASP B 73 ASP B 88 1 16 HELIX 14 14 ASP B 88 LYS B 93 1 6 HELIX 15 15 ILE B 135 LEU B 151 1 17 HELIX 16 16 SER B 182 GLU B 196 1 15 HELIX 17 17 PRO B 198 LEU B 202 5 5 HELIX 18 18 LEU B 206 ILE B 210 5 5 HELIX 19 19 ILE B 317 GLY B 327 1 11 HELIX 20 20 SER B 336 GLN B 342 5 7 HELIX 21 21 ALA B 361 GLY B 368 5 8 SHEET 1 A 5 MET A 52 ILE A 61 0 SHEET 2 A 5 ARG A 9 VAL A 17 1 N VAL A 11 O ALA A 55 SHEET 3 A 5 ASN A 97 THR A 102 1 O LEU A 101 N VAL A 16 SHEET 4 A 5 VAL A 126 GLU A 130 1 O VAL A 129 N LEU A 100 SHEET 5 A 5 GLY A 112 ALA A 114 -1 N TYR A 113 O ILE A 128 SHEET 1 B 2 GLU A 270 ARG A 272 0 SHEET 2 B 2 GLU A 282 HIS A 283 -1 O GLU A 282 N CYS A 271 SHEET 1 C 2 PRO A 302 CYS A 303 0 SHEET 2 C 2 GLY A 308 TYR A 309 -1 O GLY A 308 N CYS A 303 SHEET 1 D 3 TYR A 331 GLU A 332 0 SHEET 2 D 3 CYS A 372 ASP A 374 -1 O LYS A 373 N TYR A 331 SHEET 3 D 3 ASN A 381 LYS A 384 -1 O LYS A 384 N CYS A 372 SHEET 1 E 2 ARG A 351 LYS A 352 0 SHEET 2 E 2 LYS A 357 ILE A 358 -1 O ILE A 358 N ARG A 351 SHEET 1 F 2 LYS A 407 SER A 410 0 SHEET 2 F 2 HIS A 413 ASP A 416 -1 O HIS A 413 N SER A 410 SHEET 1 G 5 MET B 52 ILE B 61 0 SHEET 2 G 5 ARG B 9 VAL B 17 1 N VAL B 11 O HIS B 53 SHEET 3 G 5 ASN B 97 THR B 102 1 O GLN B 99 N VAL B 16 SHEET 4 G 5 VAL B 126 GLU B 130 1 O ALA B 127 N ALA B 98 SHEET 5 G 5 GLY B 112 ALA B 114 -1 N TYR B 113 O ILE B 128 SHEET 1 H 2 CYS B 259 GLU B 260 0 SHEET 2 H 2 LYS B 263 PHE B 264 -1 O LYS B 263 N GLU B 260 SHEET 1 I 2 SER B 267 GLU B 270 0 SHEET 2 I 2 HIS B 283 THR B 285 -1 O CYS B 284 N THR B 269 SHEET 1 J 2 PRO B 302 CYS B 303 0 SHEET 2 J 2 GLY B 308 TYR B 309 -1 O GLY B 308 N CYS B 303 SHEET 1 K 3 VAL B 330 GLU B 332 0 SHEET 2 K 3 CYS B 372 ASP B 374 -1 O LYS B 373 N TYR B 331 SHEET 3 K 3 ASN B 381 LYS B 384 -1 O ASN B 381 N ASP B 374 SHEET 1 L 2 VAL B 408 CYS B 409 0 SHEET 2 L 2 CYS B 414 VAL B 415 -1 O VAL B 415 N VAL B 408 SSBOND 1 CYS A 120 CYS A 200 1555 1555 2.01 SSBOND 2 CYS A 160 CYS A 184 1555 1555 2.02 SSBOND 3 CYS A 162 CYS A 167 1555 1555 2.03 SSBOND 4 CYS A 216 CYS A 245 1555 1555 2.03 SSBOND 5 CYS A 227 CYS A 240 1555 1555 2.03 SSBOND 6 CYS A 229 CYS A 235 1555 1555 2.04 SSBOND 7 CYS A 239 CYS A 262 1555 1555 2.03 SSBOND 8 CYS A 253 CYS A 259 1555 1555 2.05 SSBOND 9 CYS A 258 CYS A 284 1555 1555 2.04 SSBOND 10 CYS A 271 CYS A 291 1555 1555 2.05 SSBOND 11 CYS A 278 CYS A 310 1555 1555 2.02 SSBOND 12 CYS A 303 CYS A 315 1555 1555 2.04 SSBOND 13 CYS A 322 CYS A 372 1555 1555 2.02 SSBOND 14 CYS A 337 CYS A 383 1555 1555 2.03 SSBOND 15 CYS A 350 CYS A 360 1555 1555 2.03 SSBOND 16 CYS A 367 CYS A 409 1555 1555 2.03 SSBOND 17 CYS A 403 CYS A 414 1555 1555 2.03 SSBOND 18 CYS B 120 CYS B 200 1555 1555 2.03 SSBOND 19 CYS B 160 CYS B 184 1555 1555 2.05 SSBOND 20 CYS B 162 CYS B 167 1555 1555 2.04 SSBOND 21 CYS B 216 CYS B 245 1555 1555 2.03 SSBOND 22 CYS B 227 CYS B 240 1555 1555 2.03 SSBOND 23 CYS B 229 CYS B 235 1555 1555 2.03 SSBOND 24 CYS B 239 CYS B 262 1555 1555 2.03 SSBOND 25 CYS B 253 CYS B 259 1555 1555 2.03 SSBOND 26 CYS B 258 CYS B 284 1555 1555 2.02 SSBOND 27 CYS B 271 CYS B 291 1555 1555 2.04 SSBOND 28 CYS B 278 CYS B 310 1555 1555 2.04 SSBOND 29 CYS B 303 CYS B 315 1555 1555 2.03 SSBOND 30 CYS B 322 CYS B 372 1555 1555 2.02 SSBOND 31 CYS B 337 CYS B 383 1555 1555 2.03 SSBOND 32 CYS B 350 CYS B 360 1555 1555 2.03 SSBOND 33 CYS B 367 CYS B 409 1555 1555 2.05 SSBOND 34 CYS B 403 CYS B 414 1555 1555 2.03 LINK ND2 ASN A 183 C1 NAG A 501 1555 1555 1.46 LINK C FLE A 504 N TRP A 505 1555 1555 1.33 LINK C FLE A 506 N TRP A 507 1555 1555 1.32 LINK CA CA A 1 OE1 GLU A 12 1555 1555 2.63 LINK CA CA A 1 OD1 ASP A 96 1555 1555 2.65 LINK CA CA A 1 OD2 ASP A 96 1555 1555 2.74 LINK CA CA A 1 O CYS A 200 1555 1555 2.52 LINK CA CA A 1 OD1 ASN A 203 1555 1555 2.93 LINK CA CA A 2 O VAL A 215 1555 1555 2.48 LINK CA CA A 2 OD1 ASN A 218 1555 1555 2.50 LINK CA CA A 2 O LEU A 220 1555 1555 2.34 LINK CA CA A 2 OE1 GLU A 222 1555 1555 2.76 LINK CA CA A 2 OE1 GLU A 225 1555 1555 2.65 LINK CA CA A 2 OE2 GLU A 225 1555 1555 2.61 LINK CA CA A 2 OD2 ASP A 228 1555 1555 2.40 LINK NE2 HIS A 145 ZN ZN A 503 1555 1555 2.14 LINK NE2 HIS A 149 ZN ZN A 503 1555 1555 2.16 LINK OD2 ASP A 279 CA CA A 502 1555 1555 2.76 LINK O PRO A 280 CA CA A 502 1555 1555 2.57 LINK OE1 GLU A 282 CA CA A 502 1555 1555 2.71 LINK OE2 GLU A 282 CA CA A 502 1555 1555 2.89 LINK OD2 ASP A 294 CA CA A 502 1555 1555 2.83 LINK O VAL A 295 CA CA A 502 1555 1555 2.91 LINK ZN ZN A 503 O TRP A 505 1555 1555 2.09 LINK OXT TRP A 507 ZN ZN B 1 1555 1555 2.26 LINK ZN ZN B 1 NE2 HIS B 145 1555 1555 2.33 LINK ZN ZN B 1 NE2 HIS B 149 1555 1555 2.02 LINK OE1 GLU B 12 CA CA B 422 1555 1555 2.79 LINK OD1 ASP B 96 CA CA B 422 1555 1555 2.51 LINK OD2 ASP B 96 CA CA B 422 1555 1555 2.90 LINK O CYS B 200 CA CA B 422 1555 1555 2.61 LINK OD1 ASN B 203 CA CA B 422 1555 1555 2.94 LINK ND2 ASN B 203 CA CA B 422 1555 1555 2.50 LINK O VAL B 215 CA CA B 423 1555 1555 2.33 LINK OD1 ASN B 218 CA CA B 423 1555 1555 2.80 LINK ND2 ASN B 218 CA CA B 423 1555 1555 2.77 LINK O LEU B 220 CA CA B 423 1555 1555 2.45 LINK OE1 GLU B 225 CA CA B 423 1555 1555 2.65 LINK OE2 GLU B 225 CA CA B 423 1555 1555 2.92 LINK OD2 ASP B 279 CA CA B 424 1555 1555 2.69 LINK OE1 GLU B 282 CA CA B 424 1555 1555 2.65 LINK OD1 ASP B 294 CA CA B 424 1555 1555 2.95 LINK O VAL B 295 CA CA B 424 1555 1555 2.67 LINK CA CA B 422 O HOH B 430 1555 1555 2.96 CISPEP 1 GLY A 108 PRO A 109 0 -2.12 CRYST1 73.757 100.271 133.237 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013558 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009973 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007505 0.00000